Moc05g13170 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g13170
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DNA-directed DNA polymerase
Location	chr5: 10111975 .. 10117831 (-)
RNA-Seq Expression	Moc05g13170
Synteny	Moc05g13170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGATCCTGGAAGTTTTACCATTCCAGTGTCGATAGGAGGGAAGGATGTAGGGCATGCGTTGTGTGACTTGGGCGCTAGCATCAACCTAATGCCTCTATCAGTGTATCAGAAACTGGGGATAGGAGAAGCAAGGCCAACCACCGTCACTTTACAATTGGCTGATAGATCCATTACACATCCAGAGGGTAAGATAGAGGATGTTTTGGTTCAGGTAGATAAATTCATTTTTCCTACAGATTTCATCATATTGGATTACGAAGCTGACAAGGAAATTCCAATCATTTTGGGAAAGACCATTTTTATCCACAGGGAGGGCATTGATTGATGTGCACAATAGAGAGCTCACTATGAGAGTCAATGACCAGCAGGTTACATTTTCTGTTTTTAATTCCATAAAATACCCTACTGTTATGGAAGAATGTTCTTTGTTAGAGATTGTAGATGATTTGATGAATGGTGAAATGCAAATGGAAGAGTTGTTGAGACAACTGGAGGACGAGCAAAGAAAAATTCTCAAGGCAGGAGACAAGGAAGCCAAGCTGATCCAAGGCCAACCACATGAGCCTGGATCCGACAGAATCTACAAAAAGACATTCGAGCCGCTGGAATTGAAGGACATGGTGCAAACATCGCTGCAACCATCAGTGGTGAACGCACCCAAGTTAGAGCTAAAGGTCCTGCCATCGCACCTCAAGTATGCTTATCCGGGAGAAGCAGAAACAATGCCAGTCATTATTGCAGCAAACTTAGCTGAAGAAAAAGAGTATCGGCTAATAGAGATGTTGAGAAATCACAAGAAGACCATTGGCTGGACTCTAGCTGACATCAAAAGAATCAGTCCAAGTTATTGCATGCATAAGATAAACCTAGAAGAGGGATGTAAAAATTCGGTTGAACATCAGAGGAGGTTGAACCCTGCCATGAAGGAAGTTGTTAAGAAGGAAATTATCAAATGGCTTGATGCTGGAATAATTTGCTCAATAGCCGACAGTGATTGGGTAAGTCCAGTCCAATGTGTGCCCAAGAAAGGAGGGATCACCGTGGTGCCCAATGACAACAATGAGTTGATCCCCACAAGAACCATAACCGGTTGGCGCATCTGTATGGACTATAGGAAGTTGAACAAAGCAATTAAGAAGGATCATTTTCCATTGCCATTCATTGATCAGATGTTAGATCAGTTGGCTGGGCAAGAATACTACTGCTTCTTGGATAGGTACAGTGGATACAACCAAATCACTATCGATCCTCAAGATCAGCAAAAGACTACATTCACTTGTCCATATGGTACGTTTGCATTTAGGAGAATGCCCTTTGGATTGTGCAATGCTCCAGCAACATTCTAGCGATGTATGATGGCAATATTCTCAGACTTAATAGAGACGGTGGTTGAGGTCTTCATGGATGACTTCTCAGTGTTTGGAAGAGACTTCAACGAGTGCCTGAGCAACCTGGAGTAAGTGTTGAGGAGGTGTGAAGACACCAATTTAGTGCTCAACTGGGAAAAATGCCACTTTATGGTAAACGAAGGGATTGTGCTGGGTCACAAAGTATCCAAGAAAGGGATATAGGTCGATCGTGCCAAGATCGAAGTCATAGAGAAGCTGCCCCCTCCCACCTCAGTCAGAGGAGTCAGAAGTTTCCTTGGACACGTAGGGTTCTATTGGAAGGAAGGGGAAGCTAATTCACCCAATTTACTACGCTAGCAAAACATTGGTGGAGGCTCAATTAAATTACACCACCACTGAGAAAGAACTATTAGCTGTGATTTTTGCGTTTGAAAAATTCAGAGCTTACCTCATTGGAACGAAGGTAGTGGTGTACACTGACCATGCAGCTATCATGTATTTGCTTTTAAAAAAGGATGCCAAGCCAAGGTTGATTCGATGGGTGTTGCTGTTGCAAGAATTTGATTTAGAGATTAGAGATAAAAAAGGATCAGAGAACCAAGTAGCAGACCATTTATCAAGAGTAGAGCTAGAGGGAGCAGTGAAAGAACAACAAACAAAAATCAGAGATGCATTCCCTGATGAGAAGTTGCTAGCGGTGGCAGAATAGAAAAAAGACGTGGAGCTGTGGTTTGCTGATATGGCCAATTATGTAGCTAGTGGAATCGTGCCATCAAACATGAAAAGGCAGCAACTTAAACGATTCATCTATGACAAATTGTGCAAGGATCAAATTATGCGGAGATGTGTTGACAGTGCGGAAGCATCAATAGTGTTGGAGCATTGTCATTCTGCCCCTTACGGTGGGCATTTTGGAGGACAGCTAACTACAGCTAAAATCTTCCAAAGTGGCTACTATTGGTCAACTGTCTTCCAAGATTCCCACTCGTATGCAAGGAATTGTGACAAATGCCAGAGAGTGGGAAACGTCTCAAGCAAGTGAGAAATGCCTCTGAATTTTATCCTTGAGGTCGAACTCTTTGATGTTTGGGGAATAGATTTCATGGGACCTTTCCTTCCATCAAATGGTAACCTCTACATCCTATTGGCAGTGGATTATGTTTCTAAATAGGTGGAAGCAACAACTTGTGTGATGTGCGATGTGAAAACAGTCTTAAAATTCCTACACAAGAACATCTTCACAAGATTTGGAACCTCTAAGGCTGTTATAAGTGATGAGGGATCCCATTTCGTTAACAAAGCCATGAGTTCCTTGTTGGAGAAATATAATATCAAGCATAAGGTGTCCACGGCATACCACCCTCAGACGAACAGACAAGCAGAGATATCAAACAGAGAAATTAAAGGGATTCTGGAGAAGGTAGTGCATATCGGTAGAAAAGATTGGTCCTACAAGTTAGATGATGCATTATGGGCGTATAGAACTGCTTACAAAACTCCAATAGGAACTTCCCCTTACAAGCTAGTCTTTGGTAAGGCATGTCATTGTTGGCTTTTTGGCCTTAATCTCAAATTAATTAATTTTAATTAATTAATTAATGTTTTGATGATAACAAACTTAATTTTATTTATTGACATTTTTTGTATTTTAAAGTGTCTACAGTGTAGAGATAGTTACAACGATTCCAACGACTGTTAGATCATCCAAATCGGAGCTCAAACGGAGAAGTTACGATCGAAACAAATTGGAAGGAAAAATACCCGAGAAGATGACGTGGACAATTCGTAAGCTGACAAGTGACAAGCTTCTTTTTAAAGTATATATATATATTGAAAAAGAAAAGAAAAAGATTAAAAAAAATAAAAAAAAAATCAAAAAGAAAAAGTCAAAAGTTACCGTTGGTAACTTTGTTAAAAAAAAAATTGAAAAGTTTACCGTTTTCTCACATATATTATTATTATTATTATTATATATATATAATTAAAAAAAACTTGTCACATCAACTGTCACATCTCTGTTTTATATATATATATGTATATTTTTTTATTTTATTTTATCATTATTATATATATATATATTATTTTTAATTTATTTTTTTAAAATTATCTCAACCCTTCATTCTTAATGATTAAGATCTAATGGTTTAAAATTAACCTTGATTTTTTTTACCATTTTCTTCCCTCTATTTAAACTAAACTTCTCATTCAAAATTATAAAACAATTCTCTTATTCTCAATCCTCCATAACTTCAAAATTTTCATTTTGCTAATCTCTCCAAGTTCTCAATTTTTCTTTCCATCTTATTTGTGAGAGAAATTTTATTGTTGTGAGGATTGAAAATTTTTGTGAGCTCAAATTTGTATATTTACTCTATTTGAGAGTTTGTAAGTGTGTGTTTCAAAATCTTCAACTCATTGTAACGGTGTGATCCTCACCGTGGAGAGGATCGTCTTTGCTCTTGTGAAGAGCAGTGTACCGGTTTGACTCCTACCGTGGAAAGAGTCGGAATTTCAATTTACAACCCAAGAGGTGCTTGGGAAGTGGAGTAGGACAGTTGTGTCGAACCACTATAAAAATTCCCGGTGTCAAATTTCTCTAACCCTCTCTCTTATTTATTTTTGCAATTAATCTTAGAATTTGATTGTTTGCTTTAAATTTCTCTTGTTTGCCTTAGAATTTATTTTATCTTACTTTGTTAAAATTCCATATCTCAAAAAGTGTATTATTTTTGTTTAAATTGGGCCCATTTATTAAAAAGTTTATATTTTGTTAATTAAACCCTATTCACCCCCCCTCTAGGGTTGCCATACCGATCCAACAGTCATCTACTGCTTGAGTTGGAACAGAAGACGTTTTGGGCTGTGAAGAGGTTGAATATGGATCTAGCAGCAGCAGGAGAAGCGAGAAAATTTCAGCTACTAGAGTTGGATGAATTCAGAAAAGAAGCTTACGAGAACGCAAAGGTTTACAAAGAAAAGACCAAGGTGTGGCATGACAGAACAATAAAGCCAAGAACATTTGAAGAAGGACAGAGGGCGTTGTTATTCAACTCAAGGCTAAAGTTGTTTACTGGAAAATTAAAGTCAAGATGGTCAGGACCATTCACAGTGGTGAAGATATATCTTTATGGAGTTGTAACTGTCAAGGAAGATCAAACTGAAAGGGAGTTCACTGTGAATGGGCAAAGAATGAAGCATTACTGGGGAGGAGAAGTGGTGAGGAAGACGGATTCCCACCAGCTGAGGTCAACATAAAGGGTTATCAAGACAGAATAAAAGGGTAAGAATCCTTTGTTTCTTCTCTCTCTCTAGTTTTTAATTCTTGTCAATTCATTTTAATTTCCTTAATGTTGATAGTAAGATTATAATTAGAAGCGTATTTCTTTAATTTGATTTTTGTTTTAGGCAAATAAAAAAAAAAGTTTCTTCCAATTCGTTACTATACTTGCTAGAACAGAGCTGGAGGGAAGCTGAGAAATGTGGTTAACCTCATTGATGTTGGAGCATAAATCAAGGGTGCAAAAACGAAGATGGAATATAAAGAGAGAAGCAATTAATGCTTAAAGTAGAAATCGTGGGTCAGAAGTTTAAAACCGAAGTAGTTCAGACATCTCTTTCCCACGAGATAAGAAGTGCACTTTTCTAGGAAAGGTACAAAAGGAGGGAAATTTTTGAATTTGAATTTTTTTAGAAGAAAAAGGTACGACAGTTAAGGGGAGTAGTTGGCTTCTTTTTCTTAGCATTAATGATGACAGGTTGATAAGCCTATTTAAGAGAAGACAAAGAGAGAGGTTATCGTCCAAGCCCTAATTTTGCGCTAGCACCTTTCCCCTCCCTGTCCTTTTCCTTCGCTTCCCTCTGTTTACTCGCTCTCCCTTAACCCTAGGTTTCCTGCAACATTGACAAACCGTCAGCCTCATCATCCAAGTATGCCTCGAGTTAAAGCGAAAGCAAAGAAAGGTAAGAAAGCCATACCCCCTAAAGAGCTGACACCATCTCTTTCGCCGGAAAAGTCGCCAGAACTGGCCTCAAGCGAGCCCATTCCCAAAAACACCGCCTCAGAAAGAGAAATCCCCTCCCCACTAAAAAAAAACCCACTGCTAAGAAGGGAAAGAGAGCCGCAAAAGGAAAGACGCAGCCGCTTGTTCCCGCAGAAGAAGAAGAGCAGCTGGCTCAAGACACCCAAACCGAAACACCGGTCATAATGCAGACGTGCCGCCTACAAAAACATAGGCAGATAGAGGATCAGAGTTGTCGCCTGAAGCAAGACGCAGAGTTGAAGAATTTATGCAAGAGCTTTTACAAAAGGGCAGTGGTGAGGATAATCTGGGGGAAGGTGGAGCAGCCATGAAGACAGCTGGAGAAGGAGCAGTGCTATCTGACGAAGGGCAAAGAGAAATAGAAGAAGAGGTAGAAGCATCTCCGGTGCTCGCTAGAAAATCACGGAGAAAGAGAAAGCTTTCCCCAGTTGCTGAGCTCGAAAAAGGGAAGGGGCCAAAGTAG

mRNA sequence

ATGGGTGATCCTGGAAGTTTTACCATTCCAGTGTCGATAGGAGGGAAGGATGTAGGGCATGCGTTGTGTGACTTGGGCGCTAGCATCAACCTAATGCCTCTATCAGTGTATCAGAAACTGGGGATAGGAGAAGCAAGGCCAACCACCGTCACTTTACAATTGGCTGATAGATCCATTACACATCCAGAGGGGAGGGCATTGATTGATGTGCACAATAGAGAGCTCACTATGAGAGTCAATGACCAGCAGGTTACATTTTCTGTTTTTAATTCCATAAAATACCCTACTGTTATGGAAGAATGTTCTTTGTTAGAGATTGTAGATGATTTGATGAATGGTGAAATGCAAATGGAAGAGTTGTTGAGACAACTGGAGGACGAGCAAAGAAAAATTCTCAAGGCAGGAGACAAGGAAGCCAAGCTGATCCAAGGCCAACCACATGAGCCTGGATCCGACAGAATCTACAAAAAGACATTCGAGCCGCTGGAATTGAAGGACATGGTGCAAACATCGCTGCAACCATCAGTGGTGAACGCACCCAAGTTAGAGCTAAAGGTCCTGCCATCGCACCTCAAGTATGCTTATCCGGGAGAAGCAGAAACAATGCCAGTCATTATTGCAGCAAACTTAGCTGAAGAAAAAGAGTTTCCTGCAACATTGACAAACCGTCAGCCTCATCATCCAAGTATGCCTCGAGTTAAAGCGAAAGCAAAGAAAGATAGAGGATCAGAGTTGTCGCCTGAAGCAAGACGCAGAGTTGAAGAATTTATGCAAGAGCTTTTACAAAAGGGCAGTGGTGAGGATAATCTGGGGGAAGGTGGAGCAGCCATGAAGACAGCTGGAGAAGGAGCAGTGCTATCTGACGAAGGGCAAAGAGAAATAGAAGAAGAGGTAGAAGCATCTCCGGTGCTCGCTAGAAAATCACGGAGAAAGAGAAAGCTTTCCCCAGTTGCTGAGCTCGAAAAAGGGAAGGGGCCAAAGTAG

Coding sequence (CDS)

ATGGGTGATCCTGGAAGTTTTACCATTCCAGTGTCGATAGGAGGGAAGGATGTAGGGCATGCGTTGTGTGACTTGGGCGCTAGCATCAACCTAATGCCTCTATCAGTGTATCAGAAACTGGGGATAGGAGAAGCAAGGCCAACCACCGTCACTTTACAATTGGCTGATAGATCCATTACACATCCAGAGGGGAGGGCATTGATTGATGTGCACAATAGAGAGCTCACTATGAGAGTCAATGACCAGCAGGTTACATTTTCTGTTTTTAATTCCATAAAATACCCTACTGTTATGGAAGAATGTTCTTTGTTAGAGATTGTAGATGATTTGATGAATGGTGAAATGCAAATGGAAGAGTTGTTGAGACAACTGGAGGACGAGCAAAGAAAAATTCTCAAGGCAGGAGACAAGGAAGCCAAGCTGATCCAAGGCCAACCACATGAGCCTGGATCCGACAGAATCTACAAAAAGACATTCGAGCCGCTGGAATTGAAGGACATGGTGCAAACATCGCTGCAACCATCAGTGGTGAACGCACCCAAGTTAGAGCTAAAGGTCCTGCCATCGCACCTCAAGTATGCTTATCCGGGAGAAGCAGAAACAATGCCAGTCATTATTGCAGCAAACTTAGCTGAAGAAAAAGAGTTTCCTGCAACATTGACAAACCGTCAGCCTCATCATCCAAGTATGCCTCGAGTTAAAGCGAAAGCAAAGAAAGATAGAGGATCAGAGTTGTCGCCTGAAGCAAGACGCAGAGTTGAAGAATTTATGCAAGAGCTTTTACAAAAGGGCAGTGGTGAGGATAATCTGGGGGAAGGTGGAGCAGCCATGAAGACAGCTGGAGAAGGAGCAGTGCTATCTGACGAAGGGCAAAGAGAAATAGAAGAAGAGGTAGAAGCATCTCCGGTGCTCGCTAGAAAATCACGGAGAAAGAGAAAGCTTTCCCCAGTTGCTGAGCTCGAAAAAGGGAAGGGGCCAAAGTAG

Protein sequence

MGDPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSITHPEGRALIDVHNRELTMRVNDQQVTFSVFNSIKYPTVMEECSLLEIVDDLMNGEMQMEELLRQLEDEQRKILKAGDKEAKLIQGQPHEPGSDRIYKKTFEPLELKDMVQTSLQPSVVNAPKLELKVLPSHLKYAYPGEAETMPVIIAANLAEEKEFPATLTNRQPHHPSMPRVKAKAKKDRGSELSPEARRRVEEFMQELLQKGSGEDNLGEGGAAMKTAGEGAVLSDEGQREIEEEVEASPVLARKSRRKRKLSPVAELEKGKGPK

Homology

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BLAST of Moc05g13170 vs. NCBI nr
Match: XP_022147186.1 (uncharacterized protein LOC111016198 [Momordica charantia])

HSP 1 Score: 291.6 bits (745), Expect = 8.5e-75
Identity = 162/257 (63.04%), Postives = 182/257 (70.82%), Query Frame = 0


Query: 1   MGDPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSIT 60
           MGD GSFTIP+SIGGK+VGH LCDLGA INL+PL VYQKLGIGEARPTTVTLQLADRSIT
Sbjct: 1   MGDLGSFTIPMSIGGKNVGHTLCDLGADINLIPLLVYQKLGIGEARPTTVTLQLADRSIT 60

Query: 61  HPE-----------------------------------------GRALIDVHNRELTMRV 120
           HPE                                         GRALIDVHN ELTMRV
Sbjct: 61  HPEGKSEDVLVQVDKFIFPADFIILDYEVNKEIPIILGRPFLSTGRALIDVHNGELTMRV 120

Query: 121 NDQQVTFSVFNSIKYPTVMEECSLLEIVDDLMNGEMQMEELLRQLEDEQRKILKAGDKEA 180
           NDQQVTF +FNSIK+P  +EECSLL + DDL + EMQ EELL QLE+E  KI +  +KEA
Sbjct: 121 NDQQVTFILFNSIKFPADIEECSLLRLADDLRSEEMQTEELLDQLEEEITKIFEEKEKEA 180

Query: 181 KLIQGQPHEPGSDRIYKKTFEPLELKDMVQTSLQPSVVNAPKLELKVLPSHLKYAYPGEA 217
           KLIQG+P+E  SDR+YKK FE  ELKD  Q SLQ SV  A KLELKVLP+HLKYAY G+A
Sbjct: 181 KLIQGRPNEASSDRVYKKAFESSELKDREQASLQSSVEKASKLELKVLPTHLKYAYLGKA 240

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BLAST of Moc05g13170 vs. NCBI nr
Match: XP_022156989.1 (uncharacterized protein LOC111023818 [Momordica charantia])

HSP 1 Score: 251.9 bits (642), Expect = 7.5e-63
Identity = 163/317 (51.42%), Postives = 184/317 (58.04%), Query Frame = 0


Query: 1   MGDPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSIT 60
           MGDPGSFTIPV IGGK+VGHALCDLGASINLMPLSVYQKLGIGEARP TVTLQLADRSIT
Sbjct: 98  MGDPGSFTIPVLIGGKNVGHALCDLGASINLMPLSVYQKLGIGEARPITVTLQLADRSIT 157

Query: 61  HPE-----------------------------------------GRALIDVHNRELTMRV 120
           + E                                         GRALIDVHN ELT+RV
Sbjct: 158 YLEGKIEDVLVQVDKFIFPADFIILDYEADKEIPIILGRPFLSTGRALIDVHNGELTIRV 217

Query: 121 NDQQVTFSVFNSIKYPTVMEECSLLEIVDDLMNGEMQMEELLRQLEDEQRKILKAGDKEA 180
           NDQQVT S+FNSIKYP  +EECS L I DDLM+ E+Q EELL QLEDE  +I        
Sbjct: 218 NDQQVTLSIFNSIKYPIDVEECSWLRIADDLMSDEIQTEELLNQLEDELTRI-------- 277

Query: 181 KLIQGQPHEPGSDRIYKKTFEPLELKDMVQTSLQPSVVNAPKLELKVLPSHLKYAYPGEA 240
                                   +KD VQ  LQPSVV APKLELKVLPSHLKYAY GE 
Sbjct: 278 ------------------------IKDRVQAPLQPSVVKAPKLELKVLPSHLKYAYLGEV 337

Query: 241 ETMPVIIAANLAEEKE-------------FPATLTNRQPHHPSMPRVKAKAKKDRGSELS 264
           ET+PV IAA+LAEEKE                TL + +   PS      K   + G + S
Sbjct: 338 ETLPVFIAADLAEEKECRLIEMLRNHKKAIGWTLADIKGISPSY--CMHKINLEEGCKNS 380

[Close]

BLAST of Moc05g13170 vs. NCBI nr
Match: XP_030502183.1 (uncharacterized protein LOC115717351 [Cannabis sativa])

HSP 1 Score: 209.1 bits (531), Expect = 5.6e-50
Identity = 124/258 (48.06%), Postives = 156/258 (60.47%), Query Frame = 0


Query: 3   DPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSITHP 62
           DPGSFTIP SIGG+DVG ALCDLGASINLMP+S+++KLGIGEARPTTVTLQLADRS+ HP
Sbjct: 145 DPGSFTIPCSIGGRDVGRALCDLGASINLMPMSIFKKLGIGEARPTTVTLQLADRSMAHP 204

Query: 63  E-----------------------------------------GRALIDVHNRELTMRVND 122
           E                                         GR LIDV N ELTMRVND
Sbjct: 205 EGKIEDVLVQVDKFIFPADFIILDYEADRDVPIILGRSFLATGRTLIDVQNEELTMRVND 264

Query: 123 QQVTFSVFNSIKYPTVMEECSLLEIVDDLM----NGEMQMEELLRQLEDEQRKILKAGDK 182
           Q+VTF+VFN++++P  +EECS + ++D ++    + E   +E      DE   + +  D 
Sbjct: 265 QKVTFNVFNAMRFPDEIEECSRISVIDSIVAEKFHKEACKDEKFISSFDELEDLSEDEDN 324

Query: 183 EAKLIQGQPHEPGSDRIYKKTFEPLELKDMVQTSLQPSVVNAPKLELKVLPSHLKYAYPG 216
           +   +  +P +P     +KK FE LELK+      +PS    PKLELK LPSHLKYAY G
Sbjct: 325 QVAWV--EPLQPMPK--FKKPFESLELKESNFKPPKPSTQEPPKLELKPLPSHLKYAYLG 384

[Close]

BLAST of Moc05g13170 vs. NCBI nr
Match: XP_030485610.1 (uncharacterized protein LOC115702304 [Cannabis sativa])

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-48
Identity = 121/259 (46.72%), Postives = 158/259 (61.00%), Query Frame = 0


Query: 3   DPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSITHP 62
           DPGSFTIP+SIGG++VG ALCDLGASINLMP+S ++KLGIGEARPTTVTLQLADRS+ HP
Sbjct: 44  DPGSFTIPISIGGRNVGRALCDLGASINLMPMSTFRKLGIGEARPTTVTLQLADRSMAHP 103

Query: 63  E-----------------------------------------GRALIDVHNRELTMRVND 122
           E                                         GRALIDV N E+TMRVND
Sbjct: 104 EGKIEDVLVQVDKFIFPADFIILDYEADREVPIILGRPFLATGRALIDVQNGEVTMRVND 163

Query: 123 QQVTFSVFNSIKYPTVMEECSLLEIVDDLMNGEMQM-----EELLRQLEDEQRKILKAGD 182
           Q+VTF+VFN++++   +EECS L ++D ++           E ++  LED +     + D
Sbjct: 164 QKVTFNVFNAMRFQDEIEECSRLSVIDSIVAESFHKKVWKDERVISSLEDLE---ALSED 223

Query: 183 KEAKLIQGQPHEPGSDRIYKKTFEPLELKDMVQTSLQPSVVNAPKLELKVLPSHLKYAYP 216
           +E ++   +P +P     +K++FE LELK+      +PS+   PKLELK LPSHLKYAY 
Sbjct: 224 EETQVAWVEPMQPSPK--FKRSFESLELKESNFKPPKPSIQEPPKLELKPLPSHLKYAYL 283

[Close]

BLAST of Moc05g13170 vs. NCBI nr
Match: XP_030504924.1 (uncharacterized protein LOC115719886 [Cannabis sativa])

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-48
Identity = 123/258 (47.67%), Postives = 156/258 (60.47%), Query Frame = 0


Query: 3   DPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSITHP 62
           DPGSFTIP SIGG+DVG ALCDLGASINLMP+S+++KLGIGEARPTTVTLQLADRS+ HP
Sbjct: 12  DPGSFTIPCSIGGRDVGRALCDLGASINLMPMSIFKKLGIGEARPTTVTLQLADRSMAHP 71

Query: 63  E-----------------------------------------GRALIDVHNRELTMRVND 122
           E                                         GR LIDV N ELTMRVND
Sbjct: 72  EGKIEDVLVQVDKFIFPADFIILDYEADRDVPIILGRPFLATGRTLIDVQNGELTMRVND 131

Query: 123 QQVTFSVFNSIKYPTVMEECSLLEIVDDLM----NGEMQMEELLRQLEDEQRKILKAGDK 182
           Q+VTF+VFN++++P  +EECS + ++D ++    + E   +E      DE   + +  D 
Sbjct: 132 QKVTFNVFNAMRFPDEIEECSRISVIDSIVAEKFHKEAWRDERFISSFDELEDLSEDEDN 191

Query: 183 EAKLIQGQPHEPGSDRIYKKTFEPLELKDMVQTSLQPSVVNAPKLELKVLPSHLKYAYPG 216
           +   +  +P +P  +  +KK FE LELK+      +PS+   PKLELK LPSHLKYAY G
Sbjct: 192 QVAWV--EPLQPIPN--FKKPFESLELKESNFKPPKPSIQEPPKLELKPLPSHLKYAYLG 251

[Close]

BLAST of Moc05g13170 vs. ExPASy TrEMBL
Match: A0A6J1D1L0 (uncharacterized protein LOC111016198 OS=Momordica charantia OX=3673 GN=LOC111016198 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 4.1e-75
Identity = 162/257 (63.04%), Postives = 182/257 (70.82%), Query Frame = 0


Query: 1   MGDPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSIT 60
           MGD GSFTIP+SIGGK+VGH LCDLGA INL+PL VYQKLGIGEARPTTVTLQLADRSIT
Sbjct: 1   MGDLGSFTIPMSIGGKNVGHTLCDLGADINLIPLLVYQKLGIGEARPTTVTLQLADRSIT 60

Query: 61  HPE-----------------------------------------GRALIDVHNRELTMRV 120
           HPE                                         GRALIDVHN ELTMRV
Sbjct: 61  HPEGKSEDVLVQVDKFIFPADFIILDYEVNKEIPIILGRPFLSTGRALIDVHNGELTMRV 120

Query: 121 NDQQVTFSVFNSIKYPTVMEECSLLEIVDDLMNGEMQMEELLRQLEDEQRKILKAGDKEA 180
           NDQQVTF +FNSIK+P  +EECSLL + DDL + EMQ EELL QLE+E  KI +  +KEA
Sbjct: 121 NDQQVTFILFNSIKFPADIEECSLLRLADDLRSEEMQTEELLDQLEEEITKIFEEKEKEA 180

Query: 181 KLIQGQPHEPGSDRIYKKTFEPLELKDMVQTSLQPSVVNAPKLELKVLPSHLKYAYPGEA 217
           KLIQG+P+E  SDR+YKK FE  ELKD  Q SLQ SV  A KLELKVLP+HLKYAY G+A
Sbjct: 181 KLIQGRPNEASSDRVYKKAFESSELKDREQASLQSSVEKASKLELKVLPTHLKYAYLGKA 240

[Close]

BLAST of Moc05g13170 vs. ExPASy TrEMBL
Match: A0A6J1DV77 (uncharacterized protein LOC111023818 OS=Momordica charantia OX=3673 GN=LOC111023818 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 3.6e-63
Identity = 163/317 (51.42%), Postives = 184/317 (58.04%), Query Frame = 0


Query: 1   MGDPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSIT 60
           MGDPGSFTIPV IGGK+VGHALCDLGASINLMPLSVYQKLGIGEARP TVTLQLADRSIT
Sbjct: 98  MGDPGSFTIPVLIGGKNVGHALCDLGASINLMPLSVYQKLGIGEARPITVTLQLADRSIT 157

Query: 61  HPE-----------------------------------------GRALIDVHNRELTMRV 120
           + E                                         GRALIDVHN ELT+RV
Sbjct: 158 YLEGKIEDVLVQVDKFIFPADFIILDYEADKEIPIILGRPFLSTGRALIDVHNGELTIRV 217

Query: 121 NDQQVTFSVFNSIKYPTVMEECSLLEIVDDLMNGEMQMEELLRQLEDEQRKILKAGDKEA 180
           NDQQVT S+FNSIKYP  +EECS L I DDLM+ E+Q EELL QLEDE  +I        
Sbjct: 218 NDQQVTLSIFNSIKYPIDVEECSWLRIADDLMSDEIQTEELLNQLEDELTRI-------- 277

Query: 181 KLIQGQPHEPGSDRIYKKTFEPLELKDMVQTSLQPSVVNAPKLELKVLPSHLKYAYPGEA 240
                                   +KD VQ  LQPSVV APKLELKVLPSHLKYAY GE 
Sbjct: 278 ------------------------IKDRVQAPLQPSVVKAPKLELKVLPSHLKYAYLGEV 337

Query: 241 ETMPVIIAANLAEEKE-------------FPATLTNRQPHHPSMPRVKAKAKKDRGSELS 264
           ET+PV IAA+LAEEKE                TL + +   PS      K   + G + S
Sbjct: 338 ETLPVFIAADLAEEKECRLIEMLRNHKKAIGWTLADIKGISPSY--CMHKINLEEGCKNS 380

[Close]

BLAST of Moc05g13170 vs. ExPASy TrEMBL
Match: A0A6J1CNZ2 (uncharacterized protein LOC111013378 OS=Momordica charantia OX=3673 GN=LOC111013378 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 6.9e-38
Identity = 99/256 (38.67%), Postives = 142/256 (55.47%), Query Frame = 0


Query: 1   MGDPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSIT 60
           M D G+FTIPVSIGG  +G ALCDLGASINLM LSVY++LG+ E RPTTVTLQLA+ SI 
Sbjct: 1   MKDSGNFTIPVSIGGYKIGQALCDLGASINLMSLSVYKRLGVREVRPTTVTLQLANHSIA 60

Query: 61  HPE-----------------------------------------GRALIDVHNRELTMRV 120
           +PE                                         GR L+DVH  ++TMRV
Sbjct: 61  NPEGKIEGVLVQVDKFIFLADFIVLDFDAGEDVPIILWRPFLATGRTLVDVHKGKVTMRV 120

Query: 121 NDQQVTFSVFNSIKYPTVMEECSLLEIVDDLMNGEMQMEELLRQLEDEQRKILKAGDKEA 180
            DQ++ FS+++S+KYP+   E ++L ++D+ +   +  E +L +   E   +L+  D+  
Sbjct: 121 QDQEIKFSIYDSMKYPSDAGERAVLRVLDEAVLKSLSAEAMLEKQNGEVDTVLEQADEIC 180

Query: 181 KLIQGQPHEPGSDRIYKKTFEPLELKDMVQTSLQPSVVNAPKLELKVLPSHLKYAYPGEA 216
           + I          R + +  E L L+D+ +  L+ S+   P+L LK +P H+KYAY G +
Sbjct: 181 QEILYFDCTSDLARSWSRVHESLVLEDIGRKQLKTSIEETPELVLKAVPKHMKYAYLGAS 240

[Close]

BLAST of Moc05g13170 vs. ExPASy TrEMBL
Match: A0A2G9HH15 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10756 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.8e-37
Identity = 117/317 (36.91%), Postives = 169/317 (53.31%), Query Frame = 0


Query: 3   DPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSITHP 62
           DPGSFTIP +IG    G ALCDLGASINLMP S+Y+ LG+GEA+PT++TLQLADRS+T+P
Sbjct: 586 DPGSFTIPCTIGTHFSGRALCDLGASINLMPYSIYRTLGLGEAKPTSITLQLADRSLTYP 645

Query: 63  E-----------------------------------------GRALIDVHNRELTMRVND 122
                                                     GR LIDV   ELTMRV D
Sbjct: 646 NGVIEDILVKVDKFIFPADFVVLDMEVDIEVPIILGRPFLATGRTLIDVQKGELTMRVQD 705

Query: 123 QQVTFSVFNSIKYPTVMEECSLLEIVDDLMNGEMQMEELLRQLEDEQRKILKAGDKEAKL 182
           QQ+TF+VF ++K+P   +EC  + + D L   E   E+ L  LE   R +L   D+E + 
Sbjct: 706 QQITFNVFKAMKFPNESDECFAVSLFDKLAGNESIAEQPLDPLE---RALLDLLDEENE- 765

Query: 183 IQGQPHEPGSDRIYKKTFEPLELKDMVQTS----LQPSVVNAPKLELKVLPSHLKYAYPG 242
              +  E        K F+   ++ + +T+    L+PS+   P LELK LPSHL YAY G
Sbjct: 766 ---EDCEVVKTLDASKYFKSRGVESLERTAPSKVLKPSIEEPPTLELKPLPSHLCYAYLG 825

Query: 243 EAETMPVIIAANLAE---EKEFPATLTNRQPHHPSMPRVKA--------KAKKDRGSELS 264
           E++T+PVII+++L++   EK       ++     ++  +K         K   + G + S
Sbjct: 826 ESDTLPVIISSSLSDLQVEKLLRVLRNHKGAIGWTIADIKGISPSFCMHKILLEDGQKPS 885

[Close]

BLAST of Moc05g13170 vs. ExPASy TrEMBL
Match: A0A2G9GK35 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21798 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 7.6e-37
Identity = 118/319 (36.99%), Postives = 172/319 (53.92%), Query Frame = 0


Query: 3   DPGSFTIPVSIGGKDVGHALCDLGASINLMPLSVYQKLGIGEARPTTVTLQLADRSITHP 62
           DPGSFTIP +IG    G ALCDLGASINLMP S+Y+ LG+GEA+PT++TLQLADRS+T+P
Sbjct: 392 DPGSFTIPCTIGTHFSGRALCDLGASINLMPYSIYRTLGLGEAKPTSITLQLADRSLTYP 451

Query: 63  E-----------------------------------------GRALIDVHNRELTMRVND 122
           +                                         GR LIDV   ELTMRV D
Sbjct: 452 KGVIEDILVKVDKFIFPADFVVLDMEVDIEVPIILGRPFLATGRTLIDVQKGELTMRVQD 511

Query: 123 QQVTFSVFNSIKYPTVMEECSLLEIVDDLMNGEMQMEELLRQLEDEQRKILKAGDKEAKL 182
           QQ+TF+VF ++K+P   +EC  + + D+L   E   E+ L  LE   R +L   D+E + 
Sbjct: 512 QQITFNVFKAMKFPNESDECFAVNLFDNLAGNESIAEQSLDPLE---RALLDLLDEENE- 571

Query: 183 IQGQPHEPGSDRIYKKTFEPLELKDMVQTS----LQPSVVNAPKLELKVLPSHLKYAYPG 242
              + +E        K F+   ++ + + +    L+PS+   P LELK LPSHL YAY G
Sbjct: 572 ---EDYEVVKTLDASKYFKSRGVESLERIAPSKVLKPSIEEPPTLELKPLPSHLCYAYLG 631

Query: 243 EAETMPVIIAANLAE---EKEFPA----------TLTNRQPHHPSMPRVKAKAKKDRGSE 264
           E++T+PVII+++L++   EK              T+ + +   PS    K   + D+  +
Sbjct: 632 ESDTLPVIISSSLSDLQVEKLLRVLRNHKGAIGWTIVDIKGISPSFCMHKILLEDDQ--K 691

The following BLAST results are available for this feature:

BLAST of Moc05g13170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147186.1	8.5e-75	63.04	uncharacterized protein LOC111016198 [Momordica charantia]	[more]
XP_022156989.1	7.5e-63	51.42	uncharacterized protein LOC111023818 [Momordica charantia]	[more]
XP_030502183.1	5.6e-50	48.06	uncharacterized protein LOC115717351 [Cannabis sativa]	[more]
XP_030485610.1	1.1e-48	46.72	uncharacterized protein LOC115702304 [Cannabis sativa]	[more]
XP_030504924.1	2.3e-48	47.67	uncharacterized protein LOC115719886 [Cannabis sativa]	[more]

BLAST of Moc05g13170 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g13170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1L0	4.1e-75	63.04	uncharacterized protein LOC111016198 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1DV77	3.6e-63	51.42	uncharacterized protein LOC111023818 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1CNZ2	6.9e-38	38.67	uncharacterized protein LOC111013378 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A2G9HH15	5.8e-37	36.91	Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10756 PE=...	[more]
A0A2G9GK35	7.6e-37	36.99	Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21798 PE=...	[more]

BLAST of Moc05g13170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 107..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..250
None	No IPR available	PANTHER	PTHR33067:SF13	ASPARTYL PROTEASE	coord: 3..102
None	No IPR available	PANTHER	PTHR33067	FAMILY NOT NAMED	coord: 3..102
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 9..95 e-value: 6.90312E-10 score: 53.4944
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..103 e-value: 5.2E-13 score: 50.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g13170.1	Moc05g13170.1	mRNA