Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTTCCACCTGAATCAAAAGATTGTTCTGTGATAAAAATCCTGGATGAGGCATTAATGGAAGAAATGGAAGCAGAAGTCATGCTAGAGCATCTAGAAGTGGTCGACTCTGGAAGCGACCTTGAGAACATAGAGGAAGACCAAGAGGTTATTTACTTAAATAGCAGCGAAAGATCAGCCAAAAGCATACGCGAATCTCTGGACATGGCGAATCATGAGTATAAATTTCTGAACTCGTCCGTAGAAGAACCACCGTTGCTCGAGCTTAAAGCATTGCCCCAACACCTCAAATATGCTTACTTGGTTTCGTCGGTGCCAATCATAATAGCAGTAGACTTAGCCATAGAGAAGAAGCAGATGTTGCTGGCGTGTTAA
mRNA sequence
ATGAAATTTCCACCTGAATCAAAAGATTGTTCTGTGATAAAAATCCTGGATGAGGCATTAATGGAAGAAATGGAAGCAGAAGTCATGCTAGAGCATCTAGAAGTGGTCGACTCTGGAAGCGACCTTGAGAACATAGAGGAAGACCAAGAGGTTATTTACTTAAATAGCAGCGAAAGATCAGCCAAAAGCATACGCGAATCTCTGGACATGGCGAATCATGAGTATAAATTTCTGAACTCGTCCGTAGAAGAACCACCGTTGCTCGAGCTTAAAGCATTGCCCCAACACCTCAAATATGCTTACTTGGTTTCGTCGGTGCCAATCATAATAGCAGTAGACTTAGCCATAGAGAAGAAGCAGATGTTGCTGGCGTGTTAA
Coding sequence (CDS)
ATGAAATTTCCACCTGAATCAAAAGATTGTTCTGTGATAAAAATCCTGGATGAGGCATTAATGGAAGAAATGGAAGCAGAAGTCATGCTAGAGCATCTAGAAGTGGTCGACTCTGGAAGCGACCTTGAGAACATAGAGGAAGACCAAGAGGTTATTTACTTAAATAGCAGCGAAAGATCAGCCAAAAGCATACGCGAATCTCTGGACATGGCGAATCATGAGTATAAATTTCTGAACTCGTCCGTAGAAGAACCACCGTTGCTCGAGCTTAAAGCATTGCCCCAACACCTCAAATATGCTTACTTGGTTTCGTCGGTGCCAATCATAATAGCAGTAGACTTAGCCATAGAGAAGAAGCAGATGTTGCTGGCGTGTTAA
Protein sequence
MKFPPESKDCSVIKILDEALMEEMEAEVMLEHLEVVDSGSDLENIEEDQEVIYLNSSERSAKSIRESLDMANHEYKFLNSSVEEPPLLELKALPQHLKYAYLVSSVPIIIAVDLAIEKKQMLLAC
Homology
BLAST of Moc05g12650 vs. NCBI nr
Match:
XP_022158578.1 (uncharacterized protein LOC111025032 [Momordica charantia])
HSP 1 Score: 83.2 bits (204), Expect = 1.8e-12
Identity = 59/119 (49.58%), Postives = 80/119 (67.23%), Query Frame = 0
Query: 12 VIKILDEALMEEMEAEVMLE-HLEVVDSGSDLENIEEDQEVIYLNSSERSAKS---IRES 71
V+++LDEA+ME + AE MLE H VD+ D + E QE++YL+ A+S + ES
Sbjct: 120 VLRVLDEAVMESLSAETMLEQHNSEVDNMLDKVD-EICQEILYLDCEGDLARSWSIVHES 179
Query: 72 LDMANHEYKFLNSSVEEPPLLELKALPQHLKYAYLVSS--VPIIIAVDLAIEKKQMLLA 125
L++ + + K L S +EPP LELKALPQHLKYAYL +S +PIIIA +L EK+ LLA
Sbjct: 180 LELEDIKCKQLKPSFDEPPELELKALPQHLKYAYLEASNMLPIIIAANLTTEKENELLA 237
BLAST of Moc05g12650 vs. NCBI nr
Match:
XP_017233064.1 (PREDICTED: uncharacterized protein LOC108207111 [Daucus carota subsp. sativus])
HSP 1 Score: 75.9 bits (185), Expect = 2.8e-10
Identity = 48/127 (37.80%), Postives = 79/127 (62.20%), Query Frame = 0
Query: 1 MKFPPESKDCSVIKILDEALMEEMEAEVMLEHLEVVDSGSDLENIEEDQEVIYL--NSSE 60
MK+ + +DCS I I DE + +++E+ + LE + E + + + +L NS
Sbjct: 100 MKYSDDVEDCSAITIFDELISDKLESNSSHDPLEQLILNVSQEEDDNVELLAWLEANSQV 159
Query: 61 RSAKSIRESLDMANHEYKFLNSSVEEPPLLELKALPQHLKYAYL--VSSVPIIIAVDLAI 120
+ ESLD+++ E+K SS++EPP LELKALP HLKYAYL S++P+II+ +L+I
Sbjct: 160 TRTRGRFESLDLSSREFKTPKSSIDEPPELELKALPSHLKYAYLGPSSTLPVIISAELSI 219
Query: 121 EKKQMLL 124
+++ L+
Sbjct: 220 AQEEKLV 226
BLAST of Moc05g12650 vs. NCBI nr
Match:
KAG8501049.1 (hypothetical protein CXB51_003148 [Gossypium anomalum])
HSP 1 Score: 75.5 bits (184), Expect = 3.7e-10
Identity = 48/129 (37.21%), Postives = 80/129 (62.02%), Query Frame = 0
Query: 1 MKFPPESKDCSVIKILDEALMEE--MEAEVMLEHLEVVDSGSDLENIEEDQEVIYLNSSE 60
M+FP DCSV+ L++ ++E+ E +LE + +D SD EED+ + L +++
Sbjct: 510 MQFPDAIDDCSVVSDLEDLIVEKELNSVEDLLERILTLDPPSD---EEEDENLALLEANQ 569
Query: 61 R--SAKSIRESLDMANHEYKFLNSSVEEPPLLELKALPQHLKYAYL--VSSVPIIIAVDL 120
+ + +S ESLD+ +Y +S+EEPP LELK LP HLKY YL S++P+I++ +L
Sbjct: 570 KGFNPQSRFESLDLEERDYTQPKASIEEPPKLELKVLPSHLKYVYLGNASTLPVIVSAEL 629
Query: 121 AIEKKQMLL 124
E+++ L+
Sbjct: 630 TTEQEEKLI 635
BLAST of Moc05g12650 vs. NCBI nr
Match:
XP_022143500.1 (uncharacterized protein LOC111013378 [Momordica charantia])
HSP 1 Score: 75.5 bits (184), Expect = 3.7e-10
Identity = 52/131 (39.69%), Postives = 85/131 (64.89%), Query Frame = 0
Query: 1 MKFPPESKDCSVIKILDEALMEEMEAEVMLEHLEVVDSGSDLENIEE-DQEVIYLNSSER 60
MK+P ++ + +V+++LDEA+++ + AE MLE + + + LE +E QE++Y + +
Sbjct: 133 MKYPSDAGERAVLRVLDEAVLKSLSAEAMLEK-QNGEVDTVLEQADEICQEILYFDCTSD 192
Query: 61 SAKS---IRESLDMANHEYKFLNSSVEEPPLLELKALPQHLKYAYLVSS--VPIIIAVDL 120
A+S + ESL + + K L +S+EE P L LKA+P+H+KYAYL +S +PIII L
Sbjct: 193 LARSWSRVHESLVLEDIGRKQLKTSIEETPELVLKAVPKHMKYAYLGASNMLPIIIVAYL 252
Query: 121 AIEKKQMLLAC 126
+EK+ LL C
Sbjct: 253 IVEKENELLQC 262
BLAST of Moc05g12650 vs. NCBI nr
Match:
XP_017227899.1 (PREDICTED: uncharacterized protein LOC108203467 [Daucus carota subsp. sativus])
HSP 1 Score: 72.4 bits (176), Expect = 3.1e-09
Identity = 50/132 (37.88%), Postives = 82/132 (62.12%), Query Frame = 0
Query: 1 MKFPPESKDCSVIKILDEALMEEMEAEVMLEHLEVVDSGSDLENI--EEDQEVIYLNSSE 60
MK+ + +DCS I I DE + +++++ + LE + + N+ EED V L E
Sbjct: 334 MKYSDDVEDCSAITIFDELISDKLDSNSSHDPLEQL-----ILNVSQEEDDNVELLAWLE 393
Query: 61 RSAKSIR-----ESLDMANHEYKFLNSSVEEPPLLELKALPQHLKYAYL--VSSVPIIIA 120
+++ R ESLD+++ E+K SS++EPP LELK LP HLKYAYL S++P+II+
Sbjct: 394 ANSQVTRTSGRFESLDLSSREFKTPKSSIDEPPELELKDLPSHLKYAYLGPSSTLPVIIS 453
Query: 121 VDLAIEKKQMLL 124
+L+I +++ L+
Sbjct: 454 AELSIAEEEKLV 460
BLAST of Moc05g12650 vs. ExPASy TrEMBL
Match:
A0A6J1DWH3 (uncharacterized protein LOC111025032 OS=Momordica charantia OX=3673 GN=LOC111025032 PE=4 SV=1)
HSP 1 Score: 83.2 bits (204), Expect = 8.5e-13
Identity = 59/119 (49.58%), Postives = 80/119 (67.23%), Query Frame = 0
Query: 12 VIKILDEALMEEMEAEVMLE-HLEVVDSGSDLENIEEDQEVIYLNSSERSAKS---IRES 71
V+++LDEA+ME + AE MLE H VD+ D + E QE++YL+ A+S + ES
Sbjct: 120 VLRVLDEAVMESLSAETMLEQHNSEVDNMLDKVD-EICQEILYLDCEGDLARSWSIVHES 179
Query: 72 LDMANHEYKFLNSSVEEPPLLELKALPQHLKYAYLVSS--VPIIIAVDLAIEKKQMLLA 125
L++ + + K L S +EPP LELKALPQHLKYAYL +S +PIIIA +L EK+ LLA
Sbjct: 180 LELEDIKCKQLKPSFDEPPELELKALPQHLKYAYLEASNMLPIIIAANLTTEKENELLA 237
BLAST of Moc05g12650 vs. ExPASy TrEMBL
Match:
A0A6J1CNZ2 (uncharacterized protein LOC111013378 OS=Momordica charantia OX=3673 GN=LOC111013378 PE=4 SV=1)
HSP 1 Score: 75.5 bits (184), Expect = 1.8e-10
Identity = 52/131 (39.69%), Postives = 85/131 (64.89%), Query Frame = 0
Query: 1 MKFPPESKDCSVIKILDEALMEEMEAEVMLEHLEVVDSGSDLENIEE-DQEVIYLNSSER 60
MK+P ++ + +V+++LDEA+++ + AE MLE + + + LE +E QE++Y + +
Sbjct: 133 MKYPSDAGERAVLRVLDEAVLKSLSAEAMLEK-QNGEVDTVLEQADEICQEILYFDCTSD 192
Query: 61 SAKS---IRESLDMANHEYKFLNSSVEEPPLLELKALPQHLKYAYLVSS--VPIIIAVDL 120
A+S + ESL + + K L +S+EE P L LKA+P+H+KYAYL +S +PIII L
Sbjct: 193 LARSWSRVHESLVLEDIGRKQLKTSIEETPELVLKAVPKHMKYAYLGASNMLPIIIVAYL 252
Query: 121 AIEKKQMLLAC 126
+EK+ LL C
Sbjct: 253 IVEKENELLQC 262
BLAST of Moc05g12650 vs. ExPASy TrEMBL
Match:
A0A6J1D1L0 (uncharacterized protein LOC111016198 OS=Momordica charantia OX=3673 GN=LOC111016198 PE=4 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 4.8e-08
Identity = 51/129 (39.53%), Postives = 76/129 (58.91%), Query Frame = 0
Query: 1 MKFPPESKDCSVIKILDEALMEEMEAEVMLEHLEVVDSGSDLENIEEDQEVIYLN----S 60
+KFP + ++CS++++ D+ EEM+ E +L+ LE + E E++ ++I S
Sbjct: 133 IKFPADIEECSLLRLADDLRSEEMQTEELLDQLE-EEITKIFEEKEKEAKLIQGRPNEAS 192
Query: 61 SERSAKSIRESLDMANHEYKFLNSSVEEPPLLELKALPQHLKYAYL--VSSVPIIIAVDL 120
S+R K ES ++ + E L SSVE+ LELK LP HLKYAYL ++ I IA DL
Sbjct: 193 SDRVYKKAFESSELKDREQASLQSSVEKASKLELKVLPTHLKYAYLGKAETLAINIAADL 252
Query: 121 AIEKKQMLL 124
A EKK+ L
Sbjct: 253 A-EKKEFRL 259
BLAST of Moc05g12650 vs. ExPASy TrEMBL
Match:
A0A6J1CS22 (uncharacterized protein LOC111013805 OS=Momordica charantia OX=3673 GN=LOC111013805 PE=4 SV=1)
HSP 1 Score: 64.7 bits (156), Expect = 3.1e-07
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0
Query: 1 MKFPPESKDCSVIKILDEALMEEMEAEVMLEHLEVVDSGSDLENIEEDQEVI---YLNSS 60
MKF ES++CSV+KILDEALMEE+E EVMLE LE V + S +E EE+ E + LN++
Sbjct: 335 MKFSAESEECSVLKILDEALMEELEXEVMLERLEAVGAKSVVEAFEEELEDVKSECLNTN 394
Query: 61 ERSAKSIRESLDM 71
+ K I ESLD+
Sbjct: 395 KGFVKKIYESLDV 407
BLAST of Moc05g12650 vs. ExPASy TrEMBL
Match:
A0A2G9HWC5 (DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_05521 PE=4 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 2.7e-06
Identity = 52/129 (40.31%), Postives = 69/129 (53.49%), Query Frame = 0
Query: 1 MKFPPESKDCSVIKILDEALMEEMEAEVMLEHLE-----VVDSGSDLENIEEDQEVIYLN 60
MKFP ES +C + + D E AE L+ LE ++D G+ EED EV+
Sbjct: 455 MKFPNESDECFAVSLFDNFAGNESIAEQPLDSLERALLDLIDEGN-----EEDLEVVKTL 514
Query: 61 SSERSAKSIR-ESLDMANHEYKFLNSSVEEPPLLELKALPQHLKYAYLVSS--VPIIIA- 119
+ + KS ESL+ + K L S+EEPP LELK LP HL Y YL S +P+II+
Sbjct: 515 DASKFFKSRGVESLERTT-QSKVLKPSIEEPPTLELKPLPSHLCYVYLGESDTLPVIISS 574
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022158578.1 | 1.8e-12 | 49.58 | uncharacterized protein LOC111025032 [Momordica charantia] | [more] |
XP_017233064.1 | 2.8e-10 | 37.80 | PREDICTED: uncharacterized protein LOC108207111 [Daucus carota subsp. sativus] | [more] |
KAG8501049.1 | 3.7e-10 | 37.21 | hypothetical protein CXB51_003148 [Gossypium anomalum] | [more] |
XP_022143500.1 | 3.7e-10 | 39.69 | uncharacterized protein LOC111013378 [Momordica charantia] | [more] |
XP_017227899.1 | 3.1e-09 | 37.88 | PREDICTED: uncharacterized protein LOC108203467 [Daucus carota subsp. sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DWH3 | 8.5e-13 | 49.58 | uncharacterized protein LOC111025032 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1CNZ2 | 1.8e-10 | 39.69 | uncharacterized protein LOC111013378 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A6J1D1L0 | 4.8e-08 | 39.53 | uncharacterized protein LOC111016198 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |
A0A6J1CS22 | 3.1e-07 | 54.79 | uncharacterized protein LOC111013805 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A2G9HWC5 | 2.7e-06 | 40.31 | DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_055... | [more] |
Match Name | E-value | Identity | Description | |