Moc05g12080 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g12080
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr5: 9447194 .. 9451762 (-)
RNA-Seq Expression	Moc05g12080
Synteny	Moc05g12080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTACTTCCTTATCGGCCTGGCTGACGAAACCTTGATGGTTAAGCTGGGCGAAGAAGCACCGTCAACCTTGGCTGTGATGTTGCAGAAGACCAAGAAGGTCATAGATGGGCAGGAGCTGCTCATAACCAAGCTAGGTCGGACAGATAAGAGGTCCGACCAGAGAAAGTCGGGCGGCCAAGACATAAGGAAGTCCAATTCTAAGCCCAGTCTTCCCAACCCACCTAGGGCTGATCTGACTACAGGAGATCAGACTCGGACTCCAGCCGAAGGGGGCCCTATGAGAGGTACACCCCAACCACTATTCTGATCTCGGAGATTCTCACTAATATCAAGGAAAACGGATTGGAAAAGCTCCCCAATCGACCTGATAAGCTTACATGGGATCTGGAAAAGTGCAGCAAAGACAGGTACTGACGTTTTCACCGCGACCACGACCATGATACCTCGAGTTGCTGGGAGTTGAAGTGCCAAATTGAAGACTTGATTTAATATGGCTACTTCAAAAGTATGTTGGAAAGTCGGGCTCGAGCTTGGCAAAGAAAAAAGAAGAGAGGAACCGTTCAAGAACGCCACCTCGGAGGGATGACCGGCCTGCGGTCATCAACACCATCTTTGGCGGCCCTAGTGGCGGCCGGTCAGGGAACAAAAGGAAGGAGCTTGCCAGGGAGGCTCGGCGTGAAGTGTGTATTATTTAAGAGCAGAAGCCGACCTGCCCCATCTCTTTCTCCGACTTCGACCTGGAAGGGGTACATTTGCCCCACAATGACGCCCTGGTGATCTCACCACTGATCAATCACGTCCAGGTCAGAAAGGTGTTAGTAGACGGGGGCGCTTCTACCAACATCCTATCTTTCACCATTTATTTAGCACTGGAATGGACTAGGGCATAGTTGAAGAAAAGTTCAACACTTTTAGTTAGATTCATAGGAGAATCCGTCACTCCGGAGGGATGCATCGATATCCCCATTACAATCAGTCAGGGTGACACTCAGGTCACCTAGATGGCCGAGTTCATGGTAATAAATGGAAGGTCGGCCTACAATACCATCTTCGGACAACCTATAATTCATTCACTTCGTGCCATCCCATCGAATTTGCACCAAGTCATGAAGTACTTTACAGCCAATGGGGTTGGCATGATCCGAGGTGAGCAGAAAACATCCCGCGAGTGCTATACCTCGGCACTCAAGGGATCGGCAGTCTGCACCCTGGAAGAACTAGCAAATCCTCTAAGTCCAACAGTTCAAACTTCCATGGACGAGCTGCCCAAGACTAGCCAGCGAGAAGTGGCTGCGCCTACAGAGGAGTTGGAGCTTGTCTCTTTACTCAGTTCAGAGAAGCAAGTGAGCATAGGCACGAAGCTGGGGGCCGCGGACAGAGAGGAGCTCATCTCCTTCCTCAGAGCGAACTCGAACGTGTTTGCATGGTCTCATGAGGACATGCCGGGCATAGATCCGAAGATTATGGTTCATTGCCTCAACATTGACGCATCGTTCCGACGCATTAAGCAAAAGAGAAGACCTATAAATAGAGAGAGGAGTGATGTAATTGTTGAGGAAGTAAGCAAACTTTTAAAAGCTGAATACATCAAAGAAATTTTGTATCCCGAGTGGCTCTCTAATGTAGTCTTAATGAAAAAATCTAATGGAAAGTAGAGAATGTGCGTAGATTTCACCAATCTTAACAAAGCTTGCTCAAAAGATTGTTTCCCACTGTCGAGGATTGACAAGCTCGTGGACGCTACGGCCGGGCACGAGCTACTCAGTTTCATAGATGCCTACTCCGGATACAACCAGATAAAGATGCATGAGCCAGATTAAGTCCACACCTCTTTTATAACTGATCAAGGCCTATACTACTATAAGATCATGCCCTTCGGTCTAAAGAACGCAGGAGCAACTTATCAAAGGATGGTGAACAAAATGTTCGCCAACCAGATCGGACGCAATATGAAGGTCTACGTAGACAATATGCTTGTCAAAAGCAAGAAATCCAAGTCGCACCTGGCCGACCTGACTAAAACTTTTGGGGTCCTCCACAAGTACTAGATGAAGTTGAATCCCGCTGTGCGCCTTTGGAGTTTCGTCTGGCAGATTCTTAGGGTTTATGGTCAATAACCAAGGAATCAAGGCCAACCCAGAGAAAATAAAGGTTGTGCTCGAGATGCAAGCCCCAAGGACCCTCAAGTAGCTACAATGCCTTAACGAAAGAATTACGACCCTCAATCGATTTGTCTCCAGGCCCACAAACAAATGCATCCTTCTCTTAAAAAACTTAAGGAAGAAGGGACCCTTTGAGTGGACAATTGAGTGCGAGAAAGCCTTTGAAGAACTCAAGAGTTATCTCTGCTCGACGTCATTGCTTGCAAAGCCCATGCTCGGAGATAAACTACACTTATATTTAGCAGTGTCCGACAAAGCAGTCAGTTCGGCCCTAGTTAAACAAGACGAAGTGCGGCAAATTCCTGTTTACTACACGAGAAAGGCCATGACCGAGGCCGAGACAATGTATCCCCAAATGGAGAAGTTGGCCCTCGACTTGGTCACCCCGGCACAAAGGCTGAGGCCGTACTTCCAAGCCCACACGGTGACTGTGCTCACAAACCTGCTTTTGAAGCAAGTCTTTCATAAACTAGAAACATCTGGCAGATTGATGAAATGGGTCGTGGAACTGAGTGAGTATGATACTCAGTTAGAGCCCTGAACGGCGGTGAAGGGGCAGACCGTCGCAGACTTCATAGCCAAACTCACTCCTCCACCGTCTTAAACATCTACGTCCGACCAGCCTTGGACGATGTACATGGACGAGTTTTCAAATGAGAAAGGATGCGGAGCGGGTGTGCTTCTCCTCGCCCCGGATGGCATGCGTTTTGAGTACATCATTCGCTTCAACTTCCGTACCTCAAACAATGAGGTCAAGTACGAAGCCCTGTTGGCCAGACTGCACATGGCAAGAGGACTTGGAGCCAGCCACCTTGAAATTTTCAGTGATTCACAGTTGATAGTGAATCAGATCAAAGAAGAGTATCAGACAAAGGACCCTCAAATGGAGAAATATCTGGTAAAGGTCAAGTCGCACCTCGCCCATTTCCAGACTTATGAAATTAGTCAGATTCCGAGATCGCAAAACTCCAATGCCGATGCCTTGGCCAAATTAGAGCTAGCCTACGAGACCGACCTGACGAGATCAATCCCAGTGGAAATCTTGGACAACCCTTCCATTTTGGAGTCGGATATGATGGAAGTCGACTCCCAACCTCCGTCATGGATGGATCCGATCAGAAACTTCCTAGAAAGCGATATTCTAATAGACTCGAGGAAGGCCAAAAAGATGACAAGGAAAGCAGCTCGATACTTGCTTCGAGATGGAACAATGTAACGGCGCAGATTTTCCTTACCCCTCCTTAAGTGCATTTCCAAAGACGATGGGAATTATGTCCTCAGGGAAGTGCATGAAGGGGTTTGTGGCAATCACTCAGGGGCTAGGTCATTGTCGGCGAAGGTCGTTCGTCAAGGTTACTACTGGCCCATAGTGGATCGAGACGCAAAAGAATTTGTGAAAGCGTGTGACAATTTCCAGCGTTTTGTGAATTTCATTCATCAACCTTCCGAGCTTCTGACTCCTATCTCAACACCATGGCCCTTTGCACAATGGAGAGTTGACCTTATCAGACCCTTCCCATTGGGTAAGGGGCAGACTAAGTATGTCGTTGTTGCCGTGGATTACTTCACCAAGTGGGCCGAGGCCGAAGCACTCTTGACAATCATGGAGGCTAGAGTCACGACCTTTATTTGGATGAACGTGGTCCGTCGTTTCGGCATACCCAATGCTATTATGACGGACAATGGCAAGCAGTTTGACAACGCCAAGTTCAAAGACTTTTGCCGCAAGCTTAGAATCAGTCCCCTCTGCTCGTCCCCAGCTCACCCTAAAGCCAACAGACAAGTAGAGGCGGTCAACAAAATCATTAAGCGTGGCCTTAAGCTATATCTTGACGCCATGAAAGAACGGTGGGCCGAGGAGCTACCTGAAGTGCTTTGGTCCTACCAAACTATGCCTCGAGAGTCCACTAGCGAAACTCCCTTCACCATGGCCTTTGGTTCCGAGGTCGTAGTTCTTGTAGAAATTGGGATGCCAACTGAGAGGATAGACTACTACGAGCATGCTAGGAACTAGAGGAACTACTCCTCAACCTCGACCTCCTCGATGAGAAGAGGGAAGCAGCCCAACTACGTATGGCCGAGTACCAAAATCGAATGGCAAGACACTACAACTCGAGAGTCCGACCTCAGAGTTTCCAGGTCGGACACTTAGTCATTCGCAACGTGCAGAAGCATGTTGAGGCATTGGAACCAAGTTGGGAGGGGCCATTCGAAGTCAAGGGCATAGTTCGACCTGGGACGTATATACTCGCCGACCTCGAAGGAAAGCTACTCTCGCACCCCTGGAACGTGGAGCATTTGAAAAGGTATTACCCTTGTAATGTCAAAATGGTCCAAAAGTGGAATGGGACTTGTAAAAATTCTCAAAGGTTAATTCCATTAAAGGGCACCGTATCATTTAA

mRNA sequence

ATGTGCTACTTCCTTATCGGCCTGGCTGACGAAACCTTGATGGTTAAGCTGGGCGAAGAAGCACCGTCAACCTTGGCTGTGATGTTGCAGAAGACCAAGAAGGTCATAGATGGGCAGGAGCTGCTCATAACCAAGCTAGGTCGGACAGATAAGAGGTCCGACCAGAGAAAGTCGGGCGGCCAAGACATAAGGAAGTCCAATTCTAAGCCCAGTCTTCCCAACCCACCTAGGGCTGATCTGACTACAGGAGATCAGACTCGGACTCCAGCCGAAGGGGGCCCTATGAGAGCTTACATGGGATCTGGAAAAGTGCAGCAAAGACAGTATGTTGGAAAGTCGGGCTCGAGCTTGGCAAAGAAAAAAGAAGAGAGGAACCGTTCAAGAACGCCACCTCGGAGGGATGACCGGCCTGCGGTCATCAACACCATCTTTGGCGGCCCTAGTGGCGGCCGGTCAGGGAACAAAAGGAAGGAGCTTGCCAGGGAGGCTCGGCGTGAAATGGCCGAGTTCATGGTAATAAATGGAAGGTCGGCCTACAATACCATCTTCGGACAACCTATAATTCATTCACTTCGTGCCATCCCATCGAATTTGCACCAAGTCATGAAGTACTTTACAGCCAATGGGGTTGGCATGATCCGAGGTGAGCAGAAAACATCCCGCGAGTGCTATACCTCGGCACTCAAGGGATCGGCAGTCTGCACCCTGGAAGAACTAGCAAATCCTCTAAGTCCAACAGTTCAAACTTCCATGGACGAGCTGCCCAAGACTAGCCAGCGAGAAGTGGCTGCGCCTACAGAGGAGTTGGAGCTTGTCTCTTTACTCAGTTCAGAGAAGCAAACTTATGAAATTAGTCAGATTCCGAGATCGCAAAACTCCAATGCCGATGCCTTGGCCAAATTAGAGCTAGCCTACGAGACCGACCTGACGAGATCAATCCCAGTGGAAATCTTGGACAACCCTTCCATTTTGGAGTCGGATATGATGGAAGTTAATTCCATTAAAGGGCACCGTATCATTTAA

Coding sequence (CDS)

ATGTGCTACTTCCTTATCGGCCTGGCTGACGAAACCTTGATGGTTAAGCTGGGCGAAGAAGCACCGTCAACCTTGGCTGTGATGTTGCAGAAGACCAAGAAGGTCATAGATGGGCAGGAGCTGCTCATAACCAAGCTAGGTCGGACAGATAAGAGGTCCGACCAGAGAAAGTCGGGCGGCCAAGACATAAGGAAGTCCAATTCTAAGCCCAGTCTTCCCAACCCACCTAGGGCTGATCTGACTACAGGAGATCAGACTCGGACTCCAGCCGAAGGGGGCCCTATGAGAGCTTACATGGGATCTGGAAAAGTGCAGCAAAGACAGTATGTTGGAAAGTCGGGCTCGAGCTTGGCAAAGAAAAAAGAAGAGAGGAACCGTTCAAGAACGCCACCTCGGAGGGATGACCGGCCTGCGGTCATCAACACCATCTTTGGCGGCCCTAGTGGCGGCCGGTCAGGGAACAAAAGGAAGGAGCTTGCCAGGGAGGCTCGGCGTGAAATGGCCGAGTTCATGGTAATAAATGGAAGGTCGGCCTACAATACCATCTTCGGACAACCTATAATTCATTCACTTCGTGCCATCCCATCGAATTTGCACCAAGTCATGAAGTACTTTACAGCCAATGGGGTTGGCATGATCCGAGGTGAGCAGAAAACATCCCGCGAGTGCTATACCTCGGCACTCAAGGGATCGGCAGTCTGCACCCTGGAAGAACTAGCAAATCCTCTAAGTCCAACAGTTCAAACTTCCATGGACGAGCTGCCCAAGACTAGCCAGCGAGAAGTGGCTGCGCCTACAGAGGAGTTGGAGCTTGTCTCTTTACTCAGTTCAGAGAAGCAAACTTATGAAATTAGTCAGATTCCGAGATCGCAAAACTCCAATGCCGATGCCTTGGCCAAATTAGAGCTAGCCTACGAGACCGACCTGACGAGATCAATCCCAGTGGAAATCTTGGACAACCCTTCCATTTTGGAGTCGGATATGATGGAAGTTAATTCCATTAAAGGGCACCGTATCATTTAA

Protein sequence

MCYFLIGLADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGRTDKRSDQRKSGGQDIRKSNSKPSLPNPPRADLTTGDQTRTPAEGGPMRAYMGSGKVQQRQYVGKSGSSLAKKKEERNRSRTPPRRDDRPAVINTIFGGPSGGRSGNKRKELAREARREMAEFMVINGRSAYNTIFGQPIIHSLRAIPSNLHQVMKYFTANGVGMIRGEQKTSRECYTSALKGSAVCTLEELANPLSPTVQTSMDELPKTSQREVAAPTEELELVSLLSSEKQTYEISQIPRSQNSNADALAKLELAYETDLTRSIPVEILDNPSILESDMMEVNSIKGHRII

Homology

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BLAST of Moc05g12080 vs. NCBI nr
Match: XP_022158414.1 (uncharacterized protein LOC111024904 [Momordica charantia])

HSP 1 Score: 253.8 bits (647), Expect = 2.1e-63
Identity = 179/413 (43.34%), Postives = 212/413 (51.33%), Query Frame = 0


Query: 1   MCYFLIGLADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGRTDKRSDQRKSGG 60
           MCYFL  LADETL VKLGEEAP+T   +LQK KKVIDGQELL TK GR +K+ DQ+K   
Sbjct: 96  MCYFLTSLADETLTVKLGEEAPTTFVEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKL-S 155

Query: 61  QDIRKSNSKPSLPNPPRADLTTGDQTRT---PAEGGPMRAYMGS---------------- 120
           Q+ RK++SK S      +  +  +  R    P+   P   Y  S                
Sbjct: 156 QEKRKADSK-SRDKGSSSSASRTEYRRLESGPSRSRPYERYTSSTIPISEILTNIEESGM 215

Query: 121 -----------GKVQQR------------------------------------QYVGKSG 180
                      G +++R                                    ++VGK  
Sbjct: 216 EKLLKRPEKLRGDLEKRNKEKYCRFHRDHGHNTTSCWELKRQIEDLIQDGYFKKFVGKPR 275

Query: 181 SSLAKKKEERNRSRTPPRRDDRPAVINTIFGGPSGGRSGNKRKELAREARRE-------- 240
           S+  +KKEER RSRTPPRR+DRPAVINTIFGGP+GG+SGNKRKELAREARRE        
Sbjct: 276 SNSVEKKEERKRSRTPPRREDRPAVINTIFGGPNGGQSGNKRKELAREARREVCIIREHK 335

Query: 241 -----------------------------------------------------------M 281
                                                                      M
Sbjct: 336 PTCSITFGDADLEGVHLPHNDALVIASLIDHDLVRRVLIDGGCIDLPVTIGQDATQVTQM 395

[Close]

BLAST of Moc05g12080 vs. NCBI nr
Match: XP_022154405.1 (uncharacterized protein LOC111021682 [Momordica charantia])

HSP 1 Score: 229.9 bits (585), Expect = 3.2e-56
Identity = 169/411 (41.12%), Postives = 206/411 (50.12%), Query Frame = 0


Query: 1   MCYFLIGLADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGRTDKRSDQRKSGG 60
           MCYFL GLADETL VKLGEEAP+T A +LQK KKVIDGQEL+ TK GR +K+ DQRK   
Sbjct: 1   MCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKVIDGQELVRTKTGRPEKQIDQRKP-S 60

Query: 61  QDIRKSNSKPSLPNP----PRADLTTGD---------QTRTPA------------EGGPM 120
           Q+ RK +SK     P     RAD    D         +  TP             E G  
Sbjct: 61  QEKRKGDSKSKDKGPSSSSSRADYRRSDSGHSRSRPYEWYTPTTILISEILTNIEESGME 120

Query: 121 RAYMGSGKVQQ----------------------------------------RQYVGKSGS 180
           +      K+++                                        +++V K   
Sbjct: 121 KLLKRPEKLRRDLEKRNKDKYCCFHRDHGHNTSNYWELKRQIEDLIQDGYFKKFVVKPRF 180

Query: 181 SLAKKKEERNRSRTPPRRDDRPAVINTIFGGPSGGRSGNKRKELAREARRE--------- 240
           +  +KKEE+ RSRT PRRDDRP +IN IFGGP+GG+S NKRKELAREA+RE         
Sbjct: 181 NSVEKKEEKKRSRTSPRRDDRPTIINIIFGGPNGGQSRNKRKELAREAKREVCIIREQKP 240

Query: 241 ----------------------------------------------------------MA 280
                                                                     MA
Sbjct: 241 TCSITFGDADLEGVHLPHNDALVIAPLIDHVLVRRVLVYGGCIDLPVTIGQDDTQVTQMA 300

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BLAST of Moc05g12080 vs. NCBI nr
Match: XP_022154846.1 (uncharacterized protein LOC111022006 [Momordica charantia])

HSP 1 Score: 224.9 bits (572), Expect = 1.0e-54
Identity = 170/436 (38.99%), Postives = 208/436 (47.71%), Query Frame = 0


Query: 1   MCYFLIGLADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGRTDKRSDQRKSG- 60
           M YFLIGLADETL ++LGEEAP T A +LQK KKVIDGQELL TK GR +K+ DQ+K G 
Sbjct: 1   MSYFLIGLADETLTIRLGEEAPVTFAEVLQKAKKVIDGQELLRTKTGRPEKQVDQKKPGQ 60

Query: 61  -------------------GQDIRKSNSKPSLPNP---------PRADLTTGDQ------ 120
                                + R++ S P+   P         P +++ T  +      
Sbjct: 61  VKWRADVRSKDKGPSSSSSRTEYRRTESGPTRSRPFERYTPTTIPISEMLTNIEESGMEK 120

Query: 121 -TRTPAE--GGPMRAYMGSGKVQQRQ------------YVGKSGSSLAKKKEERNRSRTP 180
             + P +  G P +    +    +RQ            +VGK  S+  +KKEER RSRTP
Sbjct: 121 LLKRPEKLRGDPEKCNKDNCWELKRQIEELIQDGYFKKFVGKPRSNSVEKKEERKRSRTP 180

Query: 181 PRRDDRPAVINTIFGGPSGGRSGNKRKELAREARRE------------------------ 240
           PRRDDRPAVINTIFGGPSGG+ GNKR +LAR  RRE                        
Sbjct: 181 PRRDDRPAVINTIFGGPSGGQFGNKRNKLARGTRREVCIIREQKPTCPITFGDADLEGVH 240

Query: 241 ------------------------------------------------------------ 280
                                                                       
Sbjct: 241 LPHNDALVIAPLIDHILVRRVLIDGGASANIWSLPTYLALGWTRSQLKKSPTPLVGFSGE 300

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BLAST of Moc05g12080 vs. NCBI nr
Match: XP_022157676.1 (uncharacterized protein LOC111024332 [Momordica charantia])

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-51
Identity = 162/409 (39.61%), Postives = 195/409 (47.68%), Query Frame = 0


Query: 8   LADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGRTDKRSDQRKSGGQDIRKSN 67
           +ADE L VKLGEEAP+T A +LQK KKVIDGQELL TK GR +++  + +SG  +     
Sbjct: 1   MADEALTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPERKIGRGRSGKDERADPK 60

Query: 68  SKPSLPNPPRADLTTGDQTRTPAEGGPMRAY---------------------MGSGKVQQ 127
           SK       +   ++G      AE GP R+                       G  K+ +
Sbjct: 61  SK------DKGSFSSGRAEYRRAENGPTRSRPYERFTPTTIPISEILTNIEDSGMEKLLK 120

Query: 128 R--------QYVGKSGSSLAKKKEERNRSRTPPRRDDRPAVINTIFGGPSGGRSGNKRKE 187
           R        +   K  +S A+KKEER RSRTPPRR DRPAVINTIFGGPSGG+SG+KRKE
Sbjct: 121 RPEKLRGAPERRSKDKTSSAEKKEERKRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKE 180

Query: 188 LAREARRE---------------------------------------------------- 247
           LAREARRE                                                    
Sbjct: 181 LAREARREVCIIREQGPTCPITFDGADLEEVHLPHNDALVIAPLIDHVVVRRVLVDGGAS 240

Query: 248 -------------------------------------------------------MAEFM 281
                                                                  M EF+
Sbjct: 241 ANILSLPTYLALGWTRSQLKRSPTPLVGFSGESVIPEGCIDLPVTLGQDQTRVTQMTEFV 300

[Close]

BLAST of Moc05g12080 vs. NCBI nr
Match: XP_022152110.1 (uncharacterized protein LOC111019899 [Momordica charantia])

HSP 1 Score: 212.6 bits (540), Expect = 5.2e-51
Identity = 170/443 (38.37%), Postives = 210/443 (47.40%), Query Frame = 0


Query: 1   MCYFLIGLADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGR---------TDK 60
           MCYFL GLADE L VKL EEAP+T A +LQK KKVIDGQELL TK+G+         TD 
Sbjct: 1   MCYFLTGLADEALTVKLVEEAPATFAEVLQKAKKVIDGQELLRTKIGQGRSGKDMENTDP 60

Query: 61  RSDQRKS---GGQDIRKSNSKPSLPNP---------PRADLTTGDQ-------TRTPAE- 120
           +S  + S   G  + R++ + P+   P         P +++ T  +        + P + 
Sbjct: 61  KSKDKGSFSNGRAEYRRAENGPTRSRPYERFTPTTIPISEILTNIEESGMEKLLKRPEKL 120

Query: 121 -GGPMRA-------------------YMGSGKVQQ-------RQYVGKSGSSLAKKKEER 180
            G P R                    +    +++        +++VGK  +S A+KKEER
Sbjct: 121 RGAPERRSKDKYCRFHREHGHNTSDYWELKSQIEDLIQDGYFKKFVGKPRTSSAEKKEER 180

Query: 181 NRSRTPPRRDDRPAVINTIFGGPSGGRSGNKRKELAREARRE------------------ 240
            RSRTPPRR DRPAVINTIFGGPSGG+SG+KRK+LAR ARRE                  
Sbjct: 181 KRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKKLARAARREVCIIREQRPTCPITFDXA 240

Query: 241 ------------------------------------------------------------ 281
                                                                       
Sbjct: 241 DLXEVHLPHNDALVIAPLIDHVVVRRVLVDGGASANILSLPTYLALGWTRSQLKKSPTPL 300

[Close]

BLAST of Moc05g12080 vs. ExPASy TrEMBL
Match: A0A6J1DZB9 (uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024904 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 9.9e-64
Identity = 179/413 (43.34%), Postives = 212/413 (51.33%), Query Frame = 0


Query: 1   MCYFLIGLADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGRTDKRSDQRKSGG 60
           MCYFL  LADETL VKLGEEAP+T   +LQK KKVIDGQELL TK GR +K+ DQ+K   
Sbjct: 96  MCYFLTSLADETLTVKLGEEAPTTFVEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKL-S 155

Query: 61  QDIRKSNSKPSLPNPPRADLTTGDQTRT---PAEGGPMRAYMGS---------------- 120
           Q+ RK++SK S      +  +  +  R    P+   P   Y  S                
Sbjct: 156 QEKRKADSK-SRDKGSSSSASRTEYRRLESGPSRSRPYERYTSSTIPISEILTNIEESGM 215

Query: 121 -----------GKVQQR------------------------------------QYVGKSG 180
                      G +++R                                    ++VGK  
Sbjct: 216 EKLLKRPEKLRGDLEKRNKEKYCRFHRDHGHNTTSCWELKRQIEDLIQDGYFKKFVGKPR 275

Query: 181 SSLAKKKEERNRSRTPPRRDDRPAVINTIFGGPSGGRSGNKRKELAREARRE-------- 240
           S+  +KKEER RSRTPPRR+DRPAVINTIFGGP+GG+SGNKRKELAREARRE        
Sbjct: 276 SNSVEKKEERKRSRTPPRREDRPAVINTIFGGPNGGQSGNKRKELAREARREVCIIREHK 335

Query: 241 -----------------------------------------------------------M 281
                                                                      M
Sbjct: 336 PTCSITFGDADLEGVHLPHNDALVIASLIDHDLVRRVLIDGGCIDLPVTIGQDATQVTQM 395

[Close]

BLAST of Moc05g12080 vs. ExPASy TrEMBL
Match: A0A6J1DJI4 (uncharacterized protein LOC111021682 OS=Momordica charantia OX=3673 GN=LOC111021682 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.5e-56
Identity = 169/411 (41.12%), Postives = 206/411 (50.12%), Query Frame = 0


Query: 1   MCYFLIGLADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGRTDKRSDQRKSGG 60
           MCYFL GLADETL VKLGEEAP+T A +LQK KKVIDGQEL+ TK GR +K+ DQRK   
Sbjct: 1   MCYFLTGLADETLTVKLGEEAPATFAEVLQKAKKVIDGQELVRTKTGRPEKQIDQRKP-S 60

Query: 61  QDIRKSNSKPSLPNP----PRADLTTGD---------QTRTPA------------EGGPM 120
           Q+ RK +SK     P     RAD    D         +  TP             E G  
Sbjct: 61  QEKRKGDSKSKDKGPSSSSSRADYRRSDSGHSRSRPYEWYTPTTILISEILTNIEESGME 120

Query: 121 RAYMGSGKVQQ----------------------------------------RQYVGKSGS 180
           +      K+++                                        +++V K   
Sbjct: 121 KLLKRPEKLRRDLEKRNKDKYCCFHRDHGHNTSNYWELKRQIEDLIQDGYFKKFVVKPRF 180

Query: 181 SLAKKKEERNRSRTPPRRDDRPAVINTIFGGPSGGRSGNKRKELAREARRE--------- 240
           +  +KKEE+ RSRT PRRDDRP +IN IFGGP+GG+S NKRKELAREA+RE         
Sbjct: 181 NSVEKKEEKKRSRTSPRRDDRPTIINIIFGGPNGGQSRNKRKELAREAKREVCIIREQKP 240

Query: 241 ----------------------------------------------------------MA 280
                                                                     MA
Sbjct: 241 TCSITFGDADLEGVHLPHNDALVIAPLIDHVLVRRVLVYGGCIDLPVTIGQDDTQVTQMA 300

[Close]

BLAST of Moc05g12080 vs. ExPASy TrEMBL
Match: A0A6J1DPX9 (uncharacterized protein LOC111022006 OS=Momordica charantia OX=3673 GN=LOC111022006 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 4.9e-55
Identity = 170/436 (38.99%), Postives = 208/436 (47.71%), Query Frame = 0


Query: 1   MCYFLIGLADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGRTDKRSDQRKSG- 60
           M YFLIGLADETL ++LGEEAP T A +LQK KKVIDGQELL TK GR +K+ DQ+K G 
Sbjct: 1   MSYFLIGLADETLTIRLGEEAPVTFAEVLQKAKKVIDGQELLRTKTGRPEKQVDQKKPGQ 60

Query: 61  -------------------GQDIRKSNSKPSLPNP---------PRADLTTGDQ------ 120
                                + R++ S P+   P         P +++ T  +      
Sbjct: 61  VKWRADVRSKDKGPSSSSSRTEYRRTESGPTRSRPFERYTPTTIPISEMLTNIEESGMEK 120

Query: 121 -TRTPAE--GGPMRAYMGSGKVQQRQ------------YVGKSGSSLAKKKEERNRSRTP 180
             + P +  G P +    +    +RQ            +VGK  S+  +KKEER RSRTP
Sbjct: 121 LLKRPEKLRGDPEKCNKDNCWELKRQIEELIQDGYFKKFVGKPRSNSVEKKEERKRSRTP 180

Query: 181 PRRDDRPAVINTIFGGPSGGRSGNKRKELAREARRE------------------------ 240
           PRRDDRPAVINTIFGGPSGG+ GNKR +LAR  RRE                        
Sbjct: 181 PRRDDRPAVINTIFGGPSGGQFGNKRNKLARGTRREVCIIREQKPTCPITFGDADLEGVH 240

Query: 241 ------------------------------------------------------------ 280
                                                                       
Sbjct: 241 LPHNDALVIAPLIDHILVRRVLIDGGASANIWSLPTYLALGWTRSQLKKSPTPLVGFSGE 300

[Close]

BLAST of Moc05g12080 vs. ExPASy TrEMBL
Match: A0A6J1DYW5 (uncharacterized protein LOC111024332 OS=Momordica charantia OX=3673 GN=LOC111024332 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.7e-52
Identity = 162/409 (39.61%), Postives = 195/409 (47.68%), Query Frame = 0


Query: 8   LADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGRTDKRSDQRKSGGQDIRKSN 67
           +ADE L VKLGEEAP+T A +LQK KKVIDGQELL TK GR +++  + +SG  +     
Sbjct: 1   MADEALTVKLGEEAPATFAEVLQKAKKVIDGQELLRTKTGRPERKIGRGRSGKDERADPK 60

Query: 68  SKPSLPNPPRADLTTGDQTRTPAEGGPMRAY---------------------MGSGKVQQ 127
           SK       +   ++G      AE GP R+                       G  K+ +
Sbjct: 61  SK------DKGSFSSGRAEYRRAENGPTRSRPYERFTPTTIPISEILTNIEDSGMEKLLK 120

Query: 128 R--------QYVGKSGSSLAKKKEERNRSRTPPRRDDRPAVINTIFGGPSGGRSGNKRKE 187
           R        +   K  +S A+KKEER RSRTPPRR DRPAVINTIFGGPSGG+SG+KRKE
Sbjct: 121 RPEKLRGAPERRSKDKTSSAEKKEERKRSRTPPRRTDRPAVINTIFGGPSGGQSGHKRKE 180

Query: 188 LAREARRE---------------------------------------------------- 247
           LAREARRE                                                    
Sbjct: 181 LAREARREVCIIREQGPTCPITFDGADLEEVHLPHNDALVIAPLIDHVVVRRVLVDGGAS 240

Query: 248 -------------------------------------------------------MAEFM 281
                                                                  M EF+
Sbjct: 241 ANILSLPTYLALGWTRSQLKRSPTPLVGFSGESVIPEGCIDLPVTLGQDQTRVTQMTEFV 300

[Close]

BLAST of Moc05g12080 vs. ExPASy TrEMBL
Match: A0A6J1DWS1 (uncharacterized protein LOC111024791 OS=Momordica charantia OX=3673 GN=LOC111024791 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.5e-51
Identity = 136/295 (46.10%), Postives = 166/295 (56.27%), Query Frame = 0


Query: 2   CYFLIGLADETLMVKLGEEAPSTLAVMLQKTKKVIDGQELLITKLGRTDKRSDQRKSGGQ 61
           CYF  GLADETL VKLGEEA +T A +LQK KKVIDGQELL  K GR +K+ DQ+K+  +
Sbjct: 21  CYFFTGLADETLTVKLGEEASATFAEVLQKAKKVIDGQELLRKKTGRLEKQIDQKKTSQE 80

Query: 62  DIR---KSNSKPSLPNPPRADLTTGDQTRTPAEGGPMRAYMGS----------------- 121
             R   KS  K S  +  RA+    D    P+   P   Y  +                 
Sbjct: 81  KRRAESKSKDKGSSSSSGRAEYLWSD--NGPSRSRPYERYTPTTITISEILTNIEETGME 140

Query: 122 ----------GKVQQR------------------------------------QYVGKSGS 181
                     G +++R                                    ++VGKS S
Sbjct: 141 KLLKRPKKLRGDLEKRNKDKYCHFHRDHGHNTSSCWELKRQIEDLIQDGXFKKFVGKSRS 200

Query: 182 SLAKKKEERNRSRTPPRRDDRPAVINTIFGGPSGGRSGNKRKELAREARREMAEFMVING 231
           +L +KKEER RSRTPPR+DDRPAVINTIFGG SGG+S NKRKELARE+RR+MAEF+VI+G
Sbjct: 201 NLVEKKEERKRSRTPPRQDDRPAVINTIFGGTSGGQSENKRKELARESRRQMAEFVVIDG 260

The following BLAST results are available for this feature:

BLAST of Moc05g12080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158414.1	2.1e-63	43.34	uncharacterized protein LOC111024904 [Momordica charantia]	[more]
XP_022154405.1	3.2e-56	41.12	uncharacterized protein LOC111021682 [Momordica charantia]	[more]
XP_022154846.1	1.0e-54	38.99	uncharacterized protein LOC111022006 [Momordica charantia]	[more]
XP_022157676.1	1.4e-51	39.61	uncharacterized protein LOC111024332 [Momordica charantia]	[more]
XP_022152110.1	5.2e-51	38.37	uncharacterized protein LOC111019899 [Momordica charantia]	[more]

BLAST of Moc05g12080 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g12080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZB9	9.9e-64	43.34	uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DJI4	1.5e-56	41.12	uncharacterized protein LOC111021682 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1DPX9	4.9e-55	38.99	uncharacterized protein LOC111022006 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DYW5	6.7e-52	39.61	uncharacterized protein LOC111024332 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DWS1	2.5e-51	46.10	uncharacterized protein LOC111024791 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Moc05g12080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g12080.1	Moc05g12080.1	mRNA