Moc05g12060 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g12060
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr5: 9444445 .. 9445805 (+)
RNA-Seq Expression	Moc05g12060
Synteny	Moc05g12060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGAATTTGCACAACGTTTTAATCGAGCTTCGAACCCGGTCCCTGCTCCAACCCGAATCGTCAAAGGAAGACCTGCACAAGAGGGCAAAATCTCCGACGCTCAAGTCAGTAAACAGCTCGGACTCAATATTAAGTTACCTGATAGTGGAAATGAGGCCCTTTATTTATAGGTTTAGGTTACGACAGGCGGTTACCTTGGTCAGATTTGAGGTTGGACGTGTCGGGTTCGAGCACATCGAACTCGGACACTTTCCTGGAGATAACAGGTTAGTTCTTTAATAGGAATTTGAGCTCCCTTAATTTGTTCCTCTTAATCTTTTTTCAGTGACCAGTCCCCGTCCTATACGTGGCAATAAGATATTTCATCCCCAAACATTGGCCCCATCTCTGCCAGGTTCGATCTTGACCTGACAGAGAAGATCGTTTCCCTTTAGGGAAATGGATTCACGTGATGACTTCCGAGGCCGTCATGATAAATGTTACCGTTGAGAAACCTAAAAAATAGAACCGGCGTTTGGCGCACGCTTGATTACTTCTGACGTTCAGACTTCTTACGATCTGAGACGTCCAATTTGGGACACGTGTGTGGCCAGGATTGAATTTTGGGTTACTATAAATACCCCCAAGGTTCTGTTTCCATTTTTACGCTTTCTGAAATCTTGGAGTCCAACTTCATCATATCGGAATCTTTAGGCCAGTCTCGTTCCTTTTCTCTTGTTAAGTTCTATCTTTTATTTTCAAGGTCATGTCGACGTCCTCTAGTCCCTCGAGTCTAAGTAATAGCAGTTCGTCTAACGGGGCAGCTCGGAATTAGGACCCTTCGCCTAGAAGGGCCGATTCCATAGAGGAGTTCGCCAATAGGTTAGGCTCCGAACTAAAGGAGGAGATATATAATTTTAGGTTCTCAAAGGATGATGGGGATCATAGCGATACTTCAGCCTCGGGACAAGGTTTAGAATTCCCTTCCCAGATGTCTGAGAACTACCTTGGCCCCCTTCGTAGGAGATATAACATTCCAAATGACATCATCCTTAGGCTTCCTAAGGAAGGGGAACGAGTTGATAATCCACCTGAAGGGTGCGTAACCCTTTACTTGAAAATGTTTGAATATGGTTTTCGCCTTCCCGTTCAACCTTTAGTGCAGGAATTCCTATTCTGAACTGGATTAGCGCCTGCTCAGGTGGCCCCCAATGGATGGGGAGTCATTTTCGATTTAGTCGTTTTATTTTGGCTTAGATGTAGGGAAGTGGACGACCTGGACCTCCTCGGAGTCGACCAGCTTCTGGCTTGCTTCGAGGTTAAGCGAATCTCTAGGAAGCCTAGGAGATATTACGTGTGTGCCCGGAAGGGCGGATGA

mRNA sequence

ATGCGTGAATTTGCACAACGTTTTAATCGAGCTTCGAACCCGGTCCCTGCTCCAACCCGAATCGTCAAAGGAAGACCTGCACAAGAGGGCAAAATCTCCGACGCTCAAGCGGTTACCTTGGTCAGATTTGAGGTTGGACGTGTCGGGTTCGAGCACATCGAACTCGGACACTTTCCTGGAGATAACAGGTTCTCAAAGGATGATGGGGATCATAGCGATACTTCAGCCTCGGGACAAGGTTTAGAATTCCCTTCCCAGATGTCTGAGAACTACCTTGGCCCCCTTCGTAGGAGATATAACATTCCAAATGACATCATCCTTAGGCTTCCTAAGGAAGGGGAACGAGTTGATAATCCACCTGAAGGGGAAGTGGACGACCTGGACCTCCTCGGAGTCGACCAGCTTCTGGCTTGCTTCGAGGTTAAGCGAATCTCTAGGAAGCCTAGGAGATATTACGTGTGTGCCCGGAAGGGCGGATGA

Coding sequence (CDS)

ATGCGTGAATTTGCACAACGTTTTAATCGAGCTTCGAACCCGGTCCCTGCTCCAACCCGAATCGTCAAAGGAAGACCTGCACAAGAGGGCAAAATCTCCGACGCTCAAGCGGTTACCTTGGTCAGATTTGAGGTTGGACGTGTCGGGTTCGAGCACATCGAACTCGGACACTTTCCTGGAGATAACAGGTTCTCAAAGGATGATGGGGATCATAGCGATACTTCAGCCTCGGGACAAGGTTTAGAATTCCCTTCCCAGATGTCTGAGAACTACCTTGGCCCCCTTCGTAGGAGATATAACATTCCAAATGACATCATCCTTAGGCTTCCTAAGGAAGGGGAACGAGTTGATAATCCACCTGAAGGGGAAGTGGACGACCTGGACCTCCTCGGAGTCGACCAGCTTCTGGCTTGCTTCGAGGTTAAGCGAATCTCTAGGAAGCCTAGGAGATATTACGTGTGTGCCCGGAAGGGCGGATGA

Protein sequence

MREFAQRFNRASNPVPAPTRIVKGRPAQEGKISDAQAVTLVRFEVGRVGFEHIELGHFPGDNRFSKDDGDHSDTSASGQGLEFPSQMSENYLGPLRRRYNIPNDIILRLPKEGERVDNPPEGEVDDLDLLGVDQLLACFEVKRISRKPRRYYVCARKGG

Homology

[Close]

BLAST of Moc05g12060 vs. NCBI nr
Match: XP_022159063.1 (uncharacterized protein LOC111025502, partial [Momordica charantia])

HSP 1 Score: 109.0 bits (271), Expect = 3.8e-20
Identity = 62/153 (40.52%), Postives = 79/153 (51.63%), Query Frame = 0


Query: 61  DNRFSKDDGDHSDTSASGQGLEFPSQMSENYLGPLRRRYNIPNDIILRLPKEGERVDNPP 120
           +N    DDG+ SD S SGQGLE+PS++ E+YLG LRR + IP +I+LRLP+EGER DNPP
Sbjct: 25  ENXRISDDGEDSDASTSGQGLEYPSRIPEHYLGSLRRGFAIPENILLRLPEEGERADNPP 84

Query: 121 EGEV-------------------------------------------------------D 159
           EG V                                                       +
Sbjct: 85  EGWVTLYFKMFEYGLRLPLHPFVQEFLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSE 144

[Close]

BLAST of Moc05g12060 vs. NCBI nr
Match: XP_022158122.1 (uncharacterized protein LOC111024680 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 3.8e-04
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 125 DDLDLLGVDQLLACFEVKRISRKPRRYYVCARKG 159
           ++ +LL VDQLLACFE KRI++KP R+Y+CARKG
Sbjct: 51  EEAELLDVDQLLACFEAKRIAKKPGRFYMCARKG 84

[Close]

BLAST of Moc05g12060 vs. NCBI nr
Match: XP_022144034.1 (uncharacterized protein LOC111013826 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 3.8e-04
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 125 DDLDLLGVDQLLACFEVKRISRKPRRYYVCARKG 159
           ++ +LL VDQLLACFE KRI++KP R+Y+CARKG
Sbjct: 51  EEAELLDVDQLLACFEAKRIAKKPGRFYMCARKG 84

[Close]

BLAST of Moc05g12060 vs. NCBI nr
Match: XP_022155229.1 (uncharacterized protein LOC111022371 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 3.8e-04
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 125 DDLDLLGVDQLLACFEVKRISRKPRRYYVCARKG 159
           ++ +LL VDQLLACFE KRI++KP R+Y+CARKG
Sbjct: 51  EEAELLDVDQLLACFEAKRIAKKPGRFYMCARKG 84

[Close]

BLAST of Moc05g12060 vs. NCBI nr
Match: XP_022158650.1 (uncharacterized protein LOC111025108 [Momordica charantia])

HSP 1 Score: 55.8 bits (133), Expect = 3.8e-04
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 125 DDLDLLGVDQLLACFEVKRISRKPRRYYVCARKG 159
           ++ +LL VDQLLACFE KRI++KP R+Y+CARKG
Sbjct: 51  EEAELLDVDQLLACFEAKRIAKKPGRFYMCARKG 84

[Close]

BLAST of Moc05g12060 vs. ExPASy TrEMBL
Match: A0A6J1DXS5 (uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025502 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.8e-20
Identity = 62/153 (40.52%), Postives = 79/153 (51.63%), Query Frame = 0


Query: 61  DNRFSKDDGDHSDTSASGQGLEFPSQMSENYLGPLRRRYNIPNDIILRLPKEGERVDNPP 120
           +N    DDG+ SD S SGQGLE+PS++ E+YLG LRR + IP +I+LRLP+EGER DNPP
Sbjct: 25  ENXRISDDGEDSDASTSGQGLEYPSRIPEHYLGSLRRGFAIPENILLRLPEEGERADNPP 84

Query: 121 EGEV-------------------------------------------------------D 159
           EG V                                                       +
Sbjct: 85  EGWVTLYFKMFEYGLRLPLHPFVQEFLFRTGLAPAQVAPNGWGVIFALAILFWLRARDSE 144

[Close]

BLAST of Moc05g12060 vs. ExPASy TrEMBL
Match: A0A6J1CR42 (uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013826 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-04
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 125 DDLDLLGVDQLLACFEVKRISRKPRRYYVCARKG 159
           ++ +LL VDQLLACFE KRI++KP R+Y+CARKG
Sbjct: 51  EEAELLDVDQLLACFEAKRIAKKPGRFYMCARKG 84

[Close]

BLAST of Moc05g12060 vs. ExPASy TrEMBL
Match: A0A6J1DWD2 (uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024680 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-04
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 125 DDLDLLGVDQLLACFEVKRISRKPRRYYVCARKG 159
           ++ +LL VDQLLACFE KRI++KP R+Y+CARKG
Sbjct: 51  EEAELLDVDQLLACFEAKRIAKKPGRFYMCARKG 84

[Close]

BLAST of Moc05g12060 vs. ExPASy TrEMBL
Match: A0A6J1DPM7 (uncharacterized protein LOC111022371 OS=Momordica charantia OX=3673 GN=LOC111022371 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-04
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 125 DDLDLLGVDQLLACFEVKRISRKPRRYYVCARKG 159
           ++ +LL VDQLLACFE KRI++KP R+Y+CARKG
Sbjct: 51  EEAELLDVDQLLACFEAKRIAKKPGRFYMCARKG 84

[Close]

BLAST of Moc05g12060 vs. ExPASy TrEMBL
Match: A0A6J1DWF1 (uncharacterized protein LOC111025108 OS=Momordica charantia OX=3673 GN=LOC111025108 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.9e-04
Identity = 23/34 (67.65%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 125 DDLDLLGVDQLLACFEVKRISRKPRRYYVCARKG 159
           ++ +LL VDQLLACFE KRI++KP R+Y+CARKG
Sbjct: 51  EEAELLDVDQLLACFEAKRIAKKPGRFYMCARKG 84

The following BLAST results are available for this feature:

BLAST of Moc05g12060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159063.1	3.8e-20	40.52	uncharacterized protein LOC111025502, partial [Momordica charantia]	[more]
XP_022158122.1	3.8e-04	67.65	uncharacterized protein LOC111024680 [Momordica charantia]	[more]
XP_022144034.1	3.8e-04	67.65	uncharacterized protein LOC111013826 [Momordica charantia]	[more]
XP_022155229.1	3.8e-04	67.65	uncharacterized protein LOC111022371 [Momordica charantia]	[more]
XP_022158650.1	3.8e-04	67.65	uncharacterized protein LOC111025108 [Momordica charantia]	[more]

BLAST of Moc05g12060 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g12060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXS5	1.8e-20	40.52	uncharacterized protein LOC111025502 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CR42	1.9e-04	67.65	uncharacterized protein LOC111013826 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DWD2	1.9e-04	67.65	uncharacterized protein LOC111024680 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DPM7	1.9e-04	67.65	uncharacterized protein LOC111022371 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DWF1	1.9e-04	67.65	uncharacterized protein LOC111025108 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Moc05g12060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g12060.1	Moc05g12060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane