Moc05g11070 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g11070
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr5: 8674507 .. 8675197 (-)
RNA-Seq Expression	Moc05g11070
Synteny	Moc05g11070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCTCGGTTCAACGAGGAAAAACTACAAGTGGAAGCTAGGCCTGACAGATGTAGTGACACTGCTAGCCTTTGTATCCAGTGTGAAAGACGAGCAGTTGGTGTTCTATTTTGAGAAGAAGACCCCAAGTACCTTCTCAGAAGCTTTGAGCAGCGCGCAGAAGCATATGAGTGCCGGAGAATTAATTCATTCAAAGAATGATTCTGACAGTAATCGCATAGATCATAATGCAAAGAGAGATAGACCTGGAGAAAAGCAACACGGATCAGGGTGGAAAAAAGCAGATAGGAGGCAGGATCGACCAGTCCAGCGGGATCCCCAACAGAAGTTTGAAAACACACTCCGACAACAGTTCCACTCAAACAGGTCCTGATGGAGATAAAAGACCAGAGACTGCTCAGATGGCCTGAAAGGATGAAAGCACCCTCCAGCAAAAGAAGCAAAGGTATTATTTGTTCCATCGAGATCATGGCCACACGATACAGAATTGTTTCGACCCCAACGAAGAAGTAGAGGACCTCATTCGAAGAGGTTACCTCAAAGAATACGTGGAAGATTCCAAGGCAACTCAAGAAAATGATCAAGATGACAAGTCACCCGCCAATGAGATAAGAACGATCTTCAGAGGACTTTCTGGAGGGGAATCAGACAGGAAGAGGAAAACAAGTGCCAGGGAAGCTAGAGGGTAA

mRNA sequence

ATGTGGCTCGGTTCAACGAGGAAAAACTACAAGTGGAAGCTAGGCCTGACAGATGTAGTGACACTGCTAGCCTTTGTATCCAGTGTGAAAGACGAGCAGTTGGTGTTCTATTTTGAGAAGAAGACCCCAAGTACCTTCTCAGAAGCTTTGAGCAGCGCGCAGAAGCATATGAGTGCCGGAGAATTAATTCATTCAAAGAATGATTCTGACAGTAATCGCATAGATCATAATGCAAAGAGAGATAGACCTGGAGAAAAGCAACACGGATCAGGGTGGAAAAAAGCAGATAGGAGGCAGGATCGACCAGTCCAGCGGGATCCCCAACAGAAGTTTGAAAACACACTCCGACAACAGTTCCACTCAAACAGAGGTTACCTCAAAGAATACGTGGAAGATTCCAAGGCAACTCAAGAAAATGATCAAGATGACAAGTCACCCGCCAATGAGATAAGAACGATCTTCAGAGGACTTTCTGGAGGGGAATCAGACAGGAAGAGGAAAACAAGTGCCAGGGAAGCTAGAGGGTAA

Coding sequence (CDS)

ATGTGGCTCGGTTCAACGAGGAAAAACTACAAGTGGAAGCTAGGCCTGACAGATGTAGTGACACTGCTAGCCTTTGTATCCAGTGTGAAAGACGAGCAGTTGGTGTTCTATTTTGAGAAGAAGACCCCAAGTACCTTCTCAGAAGCTTTGAGCAGCGCGCAGAAGCATATGAGTGCCGGAGAATTAATTCATTCAAAGAATGATTCTGACAGTAATCGCATAGATCATAATGCAAAGAGAGATAGACCTGGAGAAAAGCAACACGGATCAGGGTGGAAAAAAGCAGATAGGAGGCAGGATCGACCAGTCCAGCGGGATCCCCAACAGAAGTTTGAAAACACACTCCGACAACAGTTCCACTCAAACAGAGGTTACCTCAAAGAATACGTGGAAGATTCCAAGGCAACTCAAGAAAATGATCAAGATGACAAGTCACCCGCCAATGAGATAAGAACGATCTTCAGAGGACTTTCTGGAGGGGAATCAGACAGGAAGAGGAAAACAAGTGCCAGGGAAGCTAGAGGGTAA

Protein sequence

MWLGSTRKNYKWKLGLTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRIDHNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFENTLRQQFHSNRGYLKEYVEDSKATQENDQDDKSPANEIRTIFRGLSGGESDRKRKTSAREARG

Homology

[Close]

BLAST of Moc05g11070 vs. NCBI nr
Match: XP_022150104.1 (uncharacterized protein LOC111018365 [Momordica charantia])

HSP 1 Score: 132.9 bits (333), Expect = 2.7e-27
Identity = 93/182 (51.10%), Postives = 108/182 (59.34%), Query Frame = 0


Query: 15  GLTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRI 74
           GLTD V+LLAF+S V+DE L F F KKTPSTFSE LS AQ++MSAGE  +SK + D  R 
Sbjct: 70  GLTDTVSLLAFMSGVRDEHLSFSFRKKTPSTFSEELSRAQRYMSAGEFFYSKREPDEKRT 129

Query: 75  DHNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFE-----NTLRQQFHSN------- 134
           D   KR+R G+K   S W+K    +DR  Q+DP QKFE         +Q H +       
Sbjct: 130 DQ--KRERSGDKPPRSRWEK----RDRSSQKDPPQKFEKYTPTTVPLEQDHGHATQDCFD 189

Query: 135 ----------RGYLKEYVEDSKATQENDQDDKSPANEIRTIFRGLSGGESDRKRKTSARE 175
                      GYLKEYVEDSKATQ N + DKSPA EIRTI  GL   ES RK K    E
Sbjct: 190 LKEEVKGLIRMGYLKEYVEDSKATQ-NGESDKSPAREIRTIIGGLIERESGRKIKADVXE 244

[Close]

BLAST of Moc05g11070 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 124.8 bits (312), Expect = 7.4e-25
Identity = 95/216 (43.98%), Postives = 114/216 (52.78%), Query Frame = 0


Query: 15  GLTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRI 74
           GLTD V+LLAF+  V+DE L F F K+TPSTFSEALS AQ++MSAGE  +SK +S+  R 
Sbjct: 131 GLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSRAQRYMSAGEFFYSKRESNGKRT 190

Query: 75  DHNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFE---------------------- 134
           D   KR+R G+K  GS W+K    +DR  Q+DP QKFE                      
Sbjct: 191 DQ--KRERSGDKPQGSRWEK----RDRSCQKDPPQKFEKYTSTTVPLEQVLMEIKNQRLL 250

Query: 135 ---------NTLRQQ-----FHSN--------------------RGYLKEYVEDSKATQE 175
                    +T R +     FH +                    RGYLKEYVE+ KATQ 
Sbjct: 251 KWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLILRGYLKEYVEEPKATQ- 310

[Close]

BLAST of Moc05g11070 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-24
Identity = 93/216 (43.06%), Postives = 113/216 (52.31%), Query Frame = 0


Query: 15  GLTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRI 74
           GLTD V+LLAF+S V+DE L F F K+TP+TFSEALS AQ++MSAGE  +SK + D  R 
Sbjct: 306 GLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGKRT 365

Query: 75  DHNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFEN-------------TLRQQ--- 134
           D   KR+R G+K  GS W+K    +DR  Q+DP +KFE               ++ Q   
Sbjct: 366 D--PKRERSGDKPQGSRWEK----RDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLL 425

Query: 135 --------------------FHSN--------------------RGYLKEYVEDSKATQE 175
                               FH +                    RGYLKEYVE+ KATQ 
Sbjct: 426 KWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQ- 485

[Close]

BLAST of Moc05g11070 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 120.6 bits (301), Expect = 1.4e-23
Identity = 93/215 (43.26%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 16  LTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRID 75
           LTDVV+LLAF+S V+DE L F F KKTPSTFSE LS AQ++MSAGE  +SK + D  R D
Sbjct: 91  LTDVVSLLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKREPDGKRTD 150

Query: 76  HNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFE----------------------- 135
              KR+R G+K  GS W+K    +DR  Q+DP +KFE                       
Sbjct: 151 Q--KRERSGDKPQGSRWEK----RDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLK 210

Query: 136 --------NTLRQQ-----FHSN--------------------RGYLKEYVEDSKATQEN 175
                   +T R +     FH +                    RGYL+EYVE+ KATQ N
Sbjct: 211 WPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKATQ-N 270

[Close]

BLAST of Moc05g11070 vs. NCBI nr
Match: XP_022147761.1 (uncharacterized protein LOC111016619 [Momordica charantia])

HSP 1 Score: 114.8 bits (286), Expect = 7.7e-22
Identity = 62/98 (63.27%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 15  GLTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRI 74
           GLTD V LL F+S VKDEQLVF F K+T  TFSEA S AQ +MS GELIHSK D      
Sbjct: 122 GLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKYA 181

Query: 75  DHNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFE 113
           D+N KR RPGEK+HG  W+++D  Q R VQRDPQ+KFE
Sbjct: 182 DYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFE 219

[Close]

BLAST of Moc05g11070 vs. ExPASy TrEMBL
Match: A0A6J1D911 (uncharacterized protein LOC111018365 OS=Momordica charantia OX=3673 GN=LOC111018365 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-27
Identity = 93/182 (51.10%), Postives = 108/182 (59.34%), Query Frame = 0


Query: 15  GLTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRI 74
           GLTD V+LLAF+S V+DE L F F KKTPSTFSE LS AQ++MSAGE  +SK + D  R 
Sbjct: 70  GLTDTVSLLAFMSGVRDEHLSFSFRKKTPSTFSEELSRAQRYMSAGEFFYSKREPDEKRT 129

Query: 75  DHNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFE-----NTLRQQFHSN------- 134
           D   KR+R G+K   S W+K    +DR  Q+DP QKFE         +Q H +       
Sbjct: 130 DQ--KRERSGDKPPRSRWEK----RDRSSQKDPPQKFEKYTPTTVPLEQDHGHATQDCFD 189

Query: 135 ----------RGYLKEYVEDSKATQENDQDDKSPANEIRTIFRGLSGGESDRKRKTSARE 175
                      GYLKEYVEDSKATQ N + DKSPA EIRTI  GL   ES RK K    E
Sbjct: 190 LKEEVKGLIRMGYLKEYVEDSKATQ-NGESDKSPAREIRTIIGGLIERESGRKIKADVXE 244

[Close]

BLAST of Moc05g11070 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.6e-25
Identity = 95/216 (43.98%), Postives = 114/216 (52.78%), Query Frame = 0


Query: 15  GLTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRI 74
           GLTD V+LLAF+  V+DE L F F K+TPSTFSEALS AQ++MSAGE  +SK +S+  R 
Sbjct: 131 GLTDAVSLLAFIFGVRDEHLSFSFGKRTPSTFSEALSRAQRYMSAGEFFYSKRESNGKRT 190

Query: 75  DHNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFE---------------------- 134
           D   KR+R G+K  GS W+K    +DR  Q+DP QKFE                      
Sbjct: 191 DQ--KRERSGDKPQGSRWEK----RDRSCQKDPPQKFEKYTSTTVPLEQVLMEIKNQRLL 250

Query: 135 ---------NTLRQQ-----FHSN--------------------RGYLKEYVEDSKATQE 175
                    +T R +     FH +                    RGYLKEYVE+ KATQ 
Sbjct: 251 KWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLILRGYLKEYVEEPKATQ- 310

[Close]

BLAST of Moc05g11070 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 8.0e-25
Identity = 93/216 (43.06%), Postives = 113/216 (52.31%), Query Frame = 0


Query: 15  GLTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRI 74
           GLTD V+LLAF+S V+DE L F F K+TP+TFSEALS AQ++MSAGE  +SK + D  R 
Sbjct: 306 GLTDAVSLLAFMSGVRDEHLSFSFGKRTPNTFSEALSRAQRYMSAGEFFYSKREPDGKRT 365

Query: 75  DHNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFEN-------------TLRQQ--- 134
           D   KR+R G+K  GS W+K    +DR  Q+DP +KFE               ++ Q   
Sbjct: 366 D--PKRERSGDKPQGSRWEK----RDRSSQKDPPRKFEKYTPTTVPIEQVLMEIKDQRLL 425

Query: 135 --------------------FHSN--------------------RGYLKEYVEDSKATQE 175
                               FH +                    RGYLKEYVE+ KATQ 
Sbjct: 426 KWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIRRGYLKEYVEEPKATQ- 485

[Close]

BLAST of Moc05g11070 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 6.8e-24
Identity = 93/215 (43.26%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 16  LTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRID 75
           LTDVV+LLAF+S V+DE L F F KKTPSTFSE LS AQ++MSAGE  +SK + D  R D
Sbjct: 91  LTDVVSLLAFMSGVRDEHLSFSFGKKTPSTFSETLSRAQRYMSAGEFFYSKREPDGKRTD 150

Query: 76  HNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFE----------------------- 135
              KR+R G+K  GS W+K    +DR  Q+DP +KFE                       
Sbjct: 151 Q--KRERSGDKPQGSRWEK----RDRSSQKDPPRKFEKYTPTTVPLEQVLMEIKDQRLLK 210

Query: 136 --------NTLRQQ-----FHSN--------------------RGYLKEYVEDSKATQEN 175
                   +T R +     FH +                    RGYL+EYVE+ KATQ N
Sbjct: 211 WPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIRRGYLQEYVEEPKATQ-N 270

[Close]

BLAST of Moc05g11070 vs. ExPASy TrEMBL
Match: A0A6J1D3B7 (uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016619 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.7e-22
Identity = 62/98 (63.27%), Postives = 71/98 (72.45%), Query Frame = 0


Query: 15  GLTDVVTLLAFVSSVKDEQLVFYFEKKTPSTFSEALSSAQKHMSAGELIHSKNDSDSNRI 74
           GLTD V LL F+S VKDEQLVF F K+T  TFSEA S AQ +MS GELIHSK D      
Sbjct: 122 GLTDAVVLLVFISGVKDEQLVFSFGKRTSGTFSEARSRAQTYMSVGELIHSKRDPKGKYA 181

Query: 75  DHNAKRDRPGEKQHGSGWKKADRRQDRPVQRDPQQKFE 113
           D+N KR RPGEK+HG  W+++D  Q R VQRDPQ+KFE
Sbjct: 182 DYNTKRKRPGEKRHGLRWERSDSGQGRLVQRDPQRKFE 219

The following BLAST results are available for this feature:

BLAST of Moc05g11070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150104.1	2.7e-27	51.10	uncharacterized protein LOC111018365 [Momordica charantia]	[more]
XP_022142767.1	7.4e-25	43.98	uncharacterized protein LOC111012805 [Momordica charantia]	[more]
XP_022158830.1	1.6e-24	43.06	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159368.1	1.4e-23	43.26	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
XP_022147761.1	7.7e-22	63.27	uncharacterized protein LOC111016619 [Momordica charantia]	[more]

BLAST of Moc05g11070 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g11070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D911	1.3e-27	51.10	uncharacterized protein LOC111018365 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1CNT2	3.6e-25	43.98	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DWY0	8.0e-25	43.06	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DYL6	6.8e-24	43.26	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D3B7	3.7e-22	63.27	uncharacterized protein LOC111016619 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of Moc05g11070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g11070.1	Moc05g11070.1	mRNA