Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAAGGGGTTTGAGGTGGGGACTAAAAAGGTGATGATTTCCCATTTGCAATATGCTGATGACACTATTCTATTTTGTCTTGATGAGAATGACTTTCTGTTTAAATGGTGGATTGTGGTAAATTGGTTTTTAAGGGCTTCAGGCCTCTCCTTAAATCTAGACAAGACCTCTCTTGTGGGATTAAATATCAGTGATGAAAGATTGGAGGATAAAGCTTTAAGCTTGGGCTACAGAGGGGAAACTTTTCCTTTATCCTATCTTGGGCTTCCATTAGGGGGAAACTACAAAGCTGCTACCCTGTGGCAGCCTTTGGTAGAGAAAATGAAGCAAAAGCTTAACAAATGGCACAACCTAGTTCTCTCAAAATGAGGTAGATTGACTCTAGCCCAATCGGTATTGAACAGTATGCCCATATATTATCTCTCTTTTAAAAGCTCCTGTGGGAATTGCTAAAACTCTTGATAAGCTTGTGAGAGATTTTTTTTTGGAAATCAGACAGATTACACCCCACAGAAATTTGGTTAATTGAGAAACTACTTCTCTGCCCTTGAAAGAGGGAGGCCTTTGGCATATAGGGGCTTTTCACCTCCGAAATAATGTGCTATTGTTGAAGTGGTTATGGAGATTCACTCAAGAGGAAGATGCCCTATGGAGAAGAGTTAAAAGTATTTACGGGATTGAGCCTCTCAGGTGGATGTCAAAAAAGCCTAAAAGAAAAGCAGTTGGTAAACCTTGGTTTGAAATAGCAAAGAACAGCATCCTCTTCCTCAAATTCTTGTCTTTCAAAGTAAAGCATGGTGATAGAGTTCGCTTTTGGTTGGATAGATGGACTGAAAATTCCACCCTTGCTCATGACTTTCCAGAAATTTTTGCTTTATCTTTGACGTAAAAGGCCGCAATTGCTGACTGTTGGAATGATGAGCAGCTCGCTTGGGATCTTGGCCTAAGGAGGGGTCTTTTTGACAGAGAAGTAGGGGTTGGGTTGACATAATGAGTAGATTAGATACTACTTGGATTGGAGAAGGAGCTGATAAAGTGGTATGGTTTCTAGACTCTTCTGGTGCTTACACGGTGAAATCAGGCTTAAAAATTCTGTTGGAAGACACTCCACACTTGAGTCCGCTTGTTACCTCTCTTCTTTGGAAATACTCAATCCTTAAGAAGGTAAAAGTCTTCCTTTGGACCCTAGCCAACAGAGCGGTTAACATAGCCGACAGACTCCACTCCAGAGAAGATGTCCAAATTGGACTCTTTCCCCTCCTGTTTGTGTTCTTTGCAAACAAAATGAGCAAACCATAG
mRNA sequence
ATGATTAAGGGGTTTGAGGTGGGGACTAAAAAGGTGATGATTTCCCATTTGCAATATGCTGATGACACTATTCTATTTTGTCTTGATGAGAATGACTTTCTGTTTAAATGGTGGATTGTGGTAAATTGGTTTTTAAGGGCTTCAGGCCTCTCCTTAAATCTAGACAAGACCTCTCTTGTGGGATTAAATATCAGTGATGAAAGATTGGAGGATAAAGCTTTAAGCTTGGGCTACAGAGGGGAAACTTTTCCTTTATCCTATCTTGGGCTTCCATTAGGGGGAAACTACAAAGCTGCTACCCTGTGGCAGCCTTTGGTAGAGAAAATGAAGCAAAAGCTTAACAAATGGCACAACCTATGGTTATGGAGATTCACTCAAGAGGAAGATGCCCTATGGAGAAGAGTTAAAAGTATTTACGGGATTGAGCCTCTCAGGTGGATGTCAAAAAAGCCTAAAAGAAAAGCAGTTGGTAAACCTTGGTTTGAAATAGCAAAGAACAGCATCCTCTTCCTCAAATTCTTGTCTTTCAAAGTAAAGCATGGTGATAGAGTTCGCTTTTGGTTGGATAGATGGACTGAAAATTCCACCCTTGCTCATGACTTTCCAGAAATTTTTGCTTTATCTTTGACATTAGATACTACTTGGATTGGAGAAGGAGCTGATAAAGTGGTATGGTTTCTAGACTCTTCTGGTGCTTACACGGTGAAATCAGGCTTAAAAATTCTGTTGGAAGACACTCCACACTTGAGTCCGCTTGTTACCTCTCTTCTTTGGAAATACTCAATCCTTAAGAAGGTAAAAGTCTTCCTTTGGACCCTAGCCAACAGAGCGGTTAACATAGCCGACAGACTCCACTCCAGAGAAGATGTCCAAATTGGACTCTTTCCCCTCCTGTTTGTGTTCTTTGCAAACAAAATGAGCAAACCATAG
Coding sequence (CDS)
ATGATTAAGGGGTTTGAGGTGGGGACTAAAAAGGTGATGATTTCCCATTTGCAATATGCTGATGACACTATTCTATTTTGTCTTGATGAGAATGACTTTCTGTTTAAATGGTGGATTGTGGTAAATTGGTTTTTAAGGGCTTCAGGCCTCTCCTTAAATCTAGACAAGACCTCTCTTGTGGGATTAAATATCAGTGATGAAAGATTGGAGGATAAAGCTTTAAGCTTGGGCTACAGAGGGGAAACTTTTCCTTTATCCTATCTTGGGCTTCCATTAGGGGGAAACTACAAAGCTGCTACCCTGTGGCAGCCTTTGGTAGAGAAAATGAAGCAAAAGCTTAACAAATGGCACAACCTATGGTTATGGAGATTCACTCAAGAGGAAGATGCCCTATGGAGAAGAGTTAAAAGTATTTACGGGATTGAGCCTCTCAGGTGGATGTCAAAAAAGCCTAAAAGAAAAGCAGTTGGTAAACCTTGGTTTGAAATAGCAAAGAACAGCATCCTCTTCCTCAAATTCTTGTCTTTCAAAGTAAAGCATGGTGATAGAGTTCGCTTTTGGTTGGATAGATGGACTGAAAATTCCACCCTTGCTCATGACTTTCCAGAAATTTTTGCTTTATCTTTGACATTAGATACTACTTGGATTGGAGAAGGAGCTGATAAAGTGGTATGGTTTCTAGACTCTTCTGGTGCTTACACGGTGAAATCAGGCTTAAAAATTCTGTTGGAAGACACTCCACACTTGAGTCCGCTTGTTACCTCTCTTCTTTGGAAATACTCAATCCTTAAGAAGGTAAAAGTCTTCCTTTGGACCCTAGCCAACAGAGCGGTTAACATAGCCGACAGACTCCACTCCAGAGAAGATGTCCAAATTGGACTCTTTCCCCTCCTGTTTGTGTTCTTTGCAAACAAAATGAGCAAACCATAG
Protein sequence
MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLVGLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAATLWQPLVEKMKQKLNKWHNLWLWRFTQEEDALWRRVKSIYGIEPLRWMSKKPKRKAVGKPWFEIAKNSILFLKFLSFKVKHGDRVRFWLDRWTENSTLAHDFPEIFALSLTLDTTWIGEGADKVVWFLDSSGAYTVKSGLKILLEDTPHLSPLVTSLLWKYSILKKVKVFLWTLANRAVNIADRLHSREDVQIGLFPLLFVFFANKMSKP
Homology
BLAST of Moc05g10890 vs. NCBI nr
Match:
XP_022158566.1 (uncharacterized protein LOC111025019 [Momordica charantia])
HSP 1 Score: 204.1 bits (518), Expect = 1.7e-48
Identity = 102/258 (39.53%), Postives = 142/258 (55.04%), Query Frame = 0
Query: 1 MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLV 60
+I+GF VG +++++SHL+YADDTI+FC L +WW +++ F++ SGL +NL KTSL+
Sbjct: 81 IIQGFAVGRERIVVSHLRYADDTIIFCPAYKGNLDRWWALISLFIKGSGLRINLAKTSLI 140
Query: 61 GLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAATLWQPLVEKMKQKLNKWHN-- 120
G+NI + K +G R E YLGLPLGGN++ W+ LVEK + K N
Sbjct: 141 GINIGENEATSKVDKIGCRVERMSFRYLGLPLGGNHRVIVFWRHLVEKAPVSITKEMNKI 200
Query: 121 ----------------------------------------------LWLWRFTQEEDALW 180
WLW FT+EE+ALW
Sbjct: 201 VRDLFWSGATSHGCKNLVKWDISSLPMKLGGLGIGAFPPKNNALLMKWLWHFTREENALW 260
Query: 181 RRV-KSIYGIEPLRWMSKKPKRKAVGKPWFEIAKNSILFLKFLSFKVKHGDRVRFWLDRW 210
RRV SIYG++ W++K PK KA G+PWF+IAKN F + + FK GDR+ FW+D+W
Sbjct: 261 RRVIASIYGVDKYGWLTKAPKGKAKGRPWFDIAKNLSAFQEMVVFKANQGDRLSFWMDKW 320
BLAST of Moc05g10890 vs. NCBI nr
Match:
CAN83561.1 (hypothetical protein VITISV_024106 [Vitis vinifera])
HSP 1 Score: 156.0 bits (393), Expect = 5.3e-34
Identity = 103/342 (30.12%), Postives = 151/342 (44.15%), Query Frame = 0
Query: 1 MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLV 60
M++GF VG + +SHLQ+ADDTI F + L ++ F SGL +NL+K+S+
Sbjct: 1270 MLEGFRVGRNRTRVSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIY 1329
Query: 61 GLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAATLWQPLVEKMKQKLN------ 120
G+N+ L A L + +P+ YLGLPLGGN KA W P+VE++ +
Sbjct: 1330 GINLDQAHLSRLAEMLDCKASGWPILYLGLPLGGNPKACGFWDPVVERISKPKTIGGLGL 1389
Query: 121 ---KWHNL-----WLWRFTQEEDALWRRV-KSIYGIEPLRWMSKKPKRKAVGKPWFEIAK 180
W NL WLWR+ +E LW +V SIYG W + R + W IA+
Sbjct: 1390 GNISWRNLALLGKWLWRYPREGSXLWHQVILSIYGSHSNGWDANTVVRWSXRCXWKAIAQ 1449
Query: 181 NSILFLKFLSFKVKHGDRVRFWLDRWTENSTLAHDFPEIF-------------------- 240
F + V +GDR+RFW D W + L +P +F
Sbjct: 1450 VFQEFSLITRYVVGNGDRIRFWEDLWRXDQPLGTQYPRLFRVVVDKNISISSVLGPSRPF 1509
Query: 241 -------------------ALSLTLDTTWIGEGA-DKVVWFLDSSGAYTVKSGLKILLED 288
L +LD ++ D +W L SSG ++VKS L +
Sbjct: 1510 LWNLNFRRNLSDSEIEDLEGLMRSLDDLYLSPSVPDARLWPLSSSGLFSVKSFFLALSQS 1569
BLAST of Moc05g10890 vs. NCBI nr
Match:
RVW90400.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera])
HSP 1 Score: 153.7 bits (387), Expect = 2.6e-33
Identity = 81/215 (37.67%), Postives = 117/215 (54.42%), Query Frame = 0
Query: 1 MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLV 60
+++GF VG + +SHLQ+ADDTI F + L V+ F SGL +NLDK+++
Sbjct: 681 VLEGFRVGRNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLVFGHISGLKVNLDKSNIY 740
Query: 61 GLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAATLWQPLVEKMKQKLNKWHNL- 120
G+N+ L A+ L + +P+ YLGLPLGGN KA+ W P++E++ ++L+ W
Sbjct: 741 GINLEQNHLSRLAVMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAY 800
Query: 121 ------WLWRFTQEEDALWRRV-KSIYGIEPLRWMSKKPKRKAVGKPWFEIAKNSILFLK 180
WLWR+ +E ALW +V SIYG W R + PW IA F K
Sbjct: 801 LSFGGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNNVRWSHRCPWKAIALVFQEFSK 860
Query: 181 FLSFKVKHGDRVRFWLDRWTENSTLAHDFPEIFAL 208
F F V GDR+RFW D W + TL +P + ++
Sbjct: 861 FTRFVVGDGDRIRFWDDLWWGDQTLGTQYPRLLSV 895
BLAST of Moc05g10890 vs. NCBI nr
Match:
XP_009335445.1 (PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri])
HSP 1 Score: 153.7 bits (387), Expect = 2.6e-33
Identity = 115/422 (27.25%), Postives = 170/422 (40.28%), Query Frame = 0
Query: 1 MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLV 60
+IKG +G ++V ISHLQ+ADDTI F ++ D V+N F SGL +N K S+
Sbjct: 488 LIKGLGIGQERVEISHLQFADDTIFFLAEDEDVWNNLLEVLNLFCTISGLKINKAKCSMA 547
Query: 61 GLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAATLWQPLVEKMKQKLNKWH--- 120
G+N E+L+ A S G ++P+ YLGLPLGG KA W P+VEKM+++L W
Sbjct: 548 GINSDCEKLKGMADSWGCEVGSWPIKYLGLPLGGRPKALMFWDPVVEKMEKRLQSWKKAF 607
Query: 121 ------------------------------------------------------------ 180
Sbjct: 608 LSKGGRLTLIQFVLGSLPIYYMSLFKIPCGVIGRLEKLMKGFLWEGVEEGKKNHLVKWEI 667
Query: 181 -------------NL----------WLWRFTQEEDALWRRV-KSIYGIEPLRWMSKKPKR 240
NL WLWRF +E ++LW +V +S YG++ W + P R
Sbjct: 668 VIKSKEEGGLCVGNLRNQKEALLAKWLWRFPKEPNSLWHKVIRSKYGLQDNGWNANPPLR 727
Query: 241 KAVGKPWFEIAKNSILFLKFLSFKVKHGDRVRFWLDRWTENSTLAHDFPEIFALS----- 293
+ PW +I+ FL+ F+V +G+RVRFW D W E L +P +F LS
Sbjct: 728 GSSRSPWKDISCGLQSFLQCCKFEVGNGERVRFWEDGWLEGGPLKEQYPRLFLLSRMHNQ 787
BLAST of Moc05g10890 vs. NCBI nr
Match:
RVX05136.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])
HSP 1 Score: 153.3 bits (386), Expect = 3.4e-33
Identity = 105/337 (31.16%), Postives = 152/337 (45.10%), Query Frame = 0
Query: 1 MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLV 60
+++GF+VG + +SHLQ+ADDTI F + + V+ F SGL +NLDK+++
Sbjct: 138 VLEGFKVGRNRTRVSHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIY 197
Query: 61 GLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAATLWQPLVEKMKQKLNKWHNLW 120
G+N+ L A L + +P+ YLGLPLGGN K + W P++E++ ++L+ W +
Sbjct: 198 GINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAY 257
Query: 121 L---WRFT-----------------------------QEEDALWRRV------------- 180
L R T + D LW V
Sbjct: 258 LSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDV 317
Query: 181 ---KSIYGIEPLRWMSKKPKRKAVGKPWFEIAKNSILFLKFLSFKVKHGDRVRFWLDRWT 240
SIYG W R + PW IA F KF F V +GDR+RFW D W
Sbjct: 318 CVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWW 377
Query: 241 ENSTLAHDFPEIFALSLTLDTTWIGEGADKVVWFLDSSGAYTVKSGLKILLE--DTPHLS 288
L +P + + +T I DK W L SG +TVKS L + ++P +
Sbjct: 378 GEQPLGVQYPRLLRV-VTDKNAPISSILDKRSWSLSPSGLFTVKSFFLALSQYSESPPIF 437
BLAST of Moc05g10890 vs. ExPASy TrEMBL
Match:
A0A6J1E196 (uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025019 PE=4 SV=1)
HSP 1 Score: 204.1 bits (518), Expect = 8.2e-49
Identity = 102/258 (39.53%), Postives = 142/258 (55.04%), Query Frame = 0
Query: 1 MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLV 60
+I+GF VG +++++SHL+YADDTI+FC L +WW +++ F++ SGL +NL KTSL+
Sbjct: 81 IIQGFAVGRERIVVSHLRYADDTIIFCPAYKGNLDRWWALISLFIKGSGLRINLAKTSLI 140
Query: 61 GLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAATLWQPLVEKMKQKLNKWHN-- 120
G+NI + K +G R E YLGLPLGGN++ W+ LVEK + K N
Sbjct: 141 GINIGENEATSKVDKIGCRVERMSFRYLGLPLGGNHRVIVFWRHLVEKAPVSITKEMNKI 200
Query: 121 ----------------------------------------------LWLWRFTQEEDALW 180
WLW FT+EE+ALW
Sbjct: 201 VRDLFWSGATSHGCKNLVKWDISSLPMKLGGLGIGAFPPKNNALLMKWLWHFTREENALW 260
Query: 181 RRV-KSIYGIEPLRWMSKKPKRKAVGKPWFEIAKNSILFLKFLSFKVKHGDRVRFWLDRW 210
RRV SIYG++ W++K PK KA G+PWF+IAKN F + + FK GDR+ FW+D+W
Sbjct: 261 RRVIASIYGVDKYGWLTKAPKGKAKGRPWFDIAKNLSAFQEMVVFKANQGDRLSFWMDKW 320
BLAST of Moc05g10890 vs. ExPASy TrEMBL
Match:
A5BSZ6 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_024106 PE=4 SV=1)
HSP 1 Score: 156.0 bits (393), Expect = 2.6e-34
Identity = 103/342 (30.12%), Postives = 151/342 (44.15%), Query Frame = 0
Query: 1 MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLV 60
M++GF VG + +SHLQ+ADDTI F + L ++ F SGL +NL+K+S+
Sbjct: 1270 MLEGFRVGRNRTRVSHLQFADDTIFFSNSREEELQTLKSLLLVFGHISGLKVNLNKSSIY 1329
Query: 61 GLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAATLWQPLVEKMKQKLN------ 120
G+N+ L A L + +P+ YLGLPLGGN KA W P+VE++ +
Sbjct: 1330 GINLDQAHLSRLAEMLDCKASGWPILYLGLPLGGNPKACGFWDPVVERISKPKTIGGLGL 1389
Query: 121 ---KWHNL-----WLWRFTQEEDALWRRV-KSIYGIEPLRWMSKKPKRKAVGKPWFEIAK 180
W NL WLWR+ +E LW +V SIYG W + R + W IA+
Sbjct: 1390 GNISWRNLALLGKWLWRYPREGSXLWHQVILSIYGSHSNGWDANTVVRWSXRCXWKAIAQ 1449
Query: 181 NSILFLKFLSFKVKHGDRVRFWLDRWTENSTLAHDFPEIF-------------------- 240
F + V +GDR+RFW D W + L +P +F
Sbjct: 1450 VFQEFSLITRYVVGNGDRIRFWEDLWRXDQPLGTQYPRLFRVVVDKNISISSVLGPSRPF 1509
Query: 241 -------------------ALSLTLDTTWIGEGA-DKVVWFLDSSGAYTVKSGLKILLED 288
L +LD ++ D +W L SSG ++VKS L +
Sbjct: 1510 LWNLNFRRNLSDSEIEDLEGLMRSLDDLYLSPSVPDARLWPLSSSGLFSVKSFFLALSQS 1569
BLAST of Moc05g10890 vs. ExPASy TrEMBL
Match:
A0A438I181 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_280 PE=4 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 1.3e-33
Identity = 81/215 (37.67%), Postives = 117/215 (54.42%), Query Frame = 0
Query: 1 MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLV 60
+++GF VG + +SHLQ+ADDTI F + L V+ F SGL +NLDK+++
Sbjct: 681 VLEGFRVGRNRTRVSHLQFADDTIFFSSTREEDLMTLKSVLLVFGHISGLKVNLDKSNIY 740
Query: 61 GLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAATLWQPLVEKMKQKLNKWHNL- 120
G+N+ L A+ L + +P+ YLGLPLGGN KA+ W P++E++ ++L+ W
Sbjct: 741 GINLEQNHLSRLAVMLDCKASGWPILYLGLPLGGNPKASGFWDPVIERISRRLDGWQKAY 800
Query: 121 ------WLWRFTQEEDALWRRV-KSIYGIEPLRWMSKKPKRKAVGKPWFEIAKNSILFLK 180
WLWR+ +E ALW +V SIYG W R + PW IA F K
Sbjct: 801 LSFGGKWLWRYPREGSALWHQVILSIYGSHSNGWDVNNNVRWSHRCPWKAIALVFQEFSK 860
Query: 181 FLSFKVKHGDRVRFWLDRWTENSTLAHDFPEIFAL 208
F F V GDR+RFW D W + TL +P + ++
Sbjct: 861 FTRFVVGDGDRIRFWDDLWWGDQTLGTQYPRLLSV 895
BLAST of Moc05g10890 vs. ExPASy TrEMBL
Match:
A0A438J8A4 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF2_60 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 1.7e-33
Identity = 105/337 (31.16%), Postives = 152/337 (45.10%), Query Frame = 0
Query: 1 MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLV 60
+++GF+VG + +SHLQ+ADDTI F + + V+ F SGL +NLDK+++
Sbjct: 138 VLEGFKVGRNRTRVSHLQFADDTIFFSSSREEDMMTLKNVLLVFGHISGLKVNLDKSNIY 197
Query: 61 GLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAATLWQPLVEKMKQKLNKWHNLW 120
G+N+ L A L + +P+ YLGLPLGGN K + W P++E++ ++L+ W +
Sbjct: 198 GINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGFWDPVIERISRRLDGWQKAY 257
Query: 121 L---WRFT-----------------------------QEEDALWRRV------------- 180
L R T + D LW V
Sbjct: 258 LSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRDFLWSGVGEGKRDHLVNWDV 317
Query: 181 ---KSIYGIEPLRWMSKKPKRKAVGKPWFEIAKNSILFLKFLSFKVKHGDRVRFWLDRWT 240
SIYG W R + PW IA F KF F V +GDR+RFW D W
Sbjct: 318 CVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWW 377
Query: 241 ENSTLAHDFPEIFALSLTLDTTWIGEGADKVVWFLDSSGAYTVKSGLKILLE--DTPHLS 288
L +P + + +T I DK W L SG +TVKS L + ++P +
Sbjct: 378 GEQPLGVQYPRLLRV-VTDKNAPISSILDKRSWSLSPSGLFTVKSFFLALSQYSESPPIF 437
BLAST of Moc05g10890 vs. ExPASy TrEMBL
Match:
A5BSZ3 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_035610 PE=4 SV=1)
HSP 1 Score: 152.5 bits (384), Expect = 2.8e-33
Identity = 110/360 (30.56%), Postives = 153/360 (42.50%), Query Frame = 0
Query: 1 MIKGFEVGTKKVMISHLQYADDTILFCLDENDFLFKWWIVVNWFLRASGLSLNLDKTSLV 60
+ +GF VG + +SHLQ+ADDTI F + L V+ F SGL +NLDK+++
Sbjct: 1124 VFEGFRVGRNRTRVSHLQFADDTIFFXSTREEDLLTLKSVLVVFGHISGLKVNLDKSNIY 1183
Query: 61 GLNISDERLEDKALSLGYRGETFPLSYLGLPLGGNYKAAT--------LWQPLVEKMKQK 120
G+N+ + L A L + +P+ YLGLPLGGN K+ LW + E +
Sbjct: 1184 GINLGQDHLHRLAKLLDCKASGWPILYLGLPLGGNPKSGRIERLQRDFLWSGVGEGKRDH 1243
Query: 121 LNKWH------------------------NLWLWRFTQEEDALWRRV-KSIYGIEPLRWM 180
L W WLWR+ +E ALW +V SIYG W
Sbjct: 1244 LVSWDVVCKSKMKGGLGLGRISLRNSALLGKWLWRYPKEGSALWHQVILSIYGSHSNGWD 1303
Query: 181 SKKPKRKAVGKPWFEIAKNSILFLKFLSFKVKHGDRVRFWLDRWTENSTLAHDFP----- 240
+ R + PW IA+ F KF F V GDR+RFW D W + +L FP
Sbjct: 1304 ANTVVRWSHRCPWKAIAQVFQDFSKFTRFMVGDGDRIRFWEDLWWGDQSLGVRFPRLLRV 1363
Query: 241 ----------------------------------EIFALSLTLDTTWIGEGA-DKVVWFL 288
E+ +L +LD + DK W L
Sbjct: 1364 VMDKNIPISSILGSTRPFSWNFNFRRNLSDSEIEEVESLMQSLDHIHLSPSVPDKRSWSL 1423
BLAST of Moc05g10890 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05
Identity = 25/76 (32.89%), Postives = 42/76 (55.26%), Query Frame = 0
Query: 221 DKVVWFLDSSGAYTVKSGLKILLED---------TPHLSPLVTSLLWKYSILKKVKVFLW 280
DK++W +++G YTV+SG +L D PH S + + +W I+ K+K FLW
Sbjct: 117 DKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLW 176
Query: 281 TLANRAVNIADRLHSR 288
++A+ +RL +R
Sbjct: 177 RALSQALATTERLTTR 192
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022158566.1 | 1.7e-48 | 39.53 | uncharacterized protein LOC111025019 [Momordica charantia] | [more] |
CAN83561.1 | 5.3e-34 | 30.12 | hypothetical protein VITISV_024106 [Vitis vinifera] | [more] |
RVW90400.1 | 2.6e-33 | 37.67 | Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera] | [more] |
XP_009335445.1 | 2.6e-33 | 27.25 | PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri] | [more] |
RVX05136.1 | 3.4e-33 | 31.16 | LINE-1 retrotransposable element ORF2 protein [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1E196 | 8.2e-49 | 39.53 | uncharacterized protein LOC111025019 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A5BSZ6 | 2.6e-34 | 30.12 | Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... | [more] |
A0A438I181 | 1.3e-33 | 37.67 | Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX... | [more] |
A0A438J8A4 | 1.7e-33 | 31.16 | LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=LORF... | [more] |
A5BSZ3 | 2.8e-33 | 30.56 | Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI... | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 1.1e-05 | 32.89 | Ribonuclease H-like superfamily protein | [more] |