Moc05g10360 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g10360
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Retrovirus-related pol polyprotein from transposon
Location	chr5: 8152219 .. 8152747 (-)
RNA-Seq Expression	Moc05g10360
Synteny	Moc05g10360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTTCTACTGTCAAGTACCCGCTGCAGAATTATTTGTCTTATGATAGACTTTCTCCAACTTATAATTCTTTTGTTCTTAATGTTCCTACTACTTATAAGCCTCAATTTTTTCATCAAGCAGTCTCATTTTCTCATTGGAGGGATGTTATGGATGCAGAATTGAAAGCCATAGAAACTAACAAGACTTGGACCTTTGTACCACTACCATCGGGACGTCATTCTATTGGATGTAAGTGGATCTACAAAGTCAAACACCGCTCTGATGGGACCATCGAACGTTATAAAGCAAAGTTGGTTGCCAAAGGCTACACTCAGCAAGAGGGACTTGACTACATTGAAACATTCTCACCAGTTGCAAAATTGGTAACTGTAAAAGTCTTGCTCACTATTGTTGTATCTTTACATTGGCGTTTAATAGCACACTTTGTGAGCTACATTTCATGAGATTTTTATTGAAATTATTTGTTAGTTTTCGTTTTTTTAGGACAAATTTAAGCACATAAGATATGTTTTGCAGGAATAA

mRNA sequence

ATGGCTGCTTCTACTGTCAAGTACCCGCTGCAGAATTATTTGTCTTATGATAGACTTTCTCCAACTTATAATTCTTTTGTTCTTAATGTTCCTACTACTTATAAGCCTCAATTTTTTCATCAAGCAGTCTCATTTTCTCATTGGAGGGATGTTATGGATGCAGAATTGAAAGCCATAGAAACTAACAAGACTTGGACCTTTGTACCACTACCATCGGGACGTCATTCTATTGGATGTAAGTGGATCTACAAAGTCAAACACCGCTCTGATGGGACCATCGAACGTTATAAAGCAAAGTTGGTTGCCAAAGGCTACACTCAGCAAGAGGGACTTGACTACATTGAAACATTCTCACCAGTTGCAAAATTGGAATAA

Coding sequence (CDS)

ATGGCTGCTTCTACTGTCAAGTACCCGCTGCAGAATTATTTGTCTTATGATAGACTTTCTCCAACTTATAATTCTTTTGTTCTTAATGTTCCTACTACTTATAAGCCTCAATTTTTTCATCAAGCAGTCTCATTTTCTCATTGGAGGGATGTTATGGATGCAGAATTGAAAGCCATAGAAACTAACAAGACTTGGACCTTTGTACCACTACCATCGGGACGTCATTCTATTGGATGTAAGTGGATCTACAAAGTCAAACACCGCTCTGATGGGACCATCGAACGTTATAAAGCAAAGTTGGTTGCCAAAGGCTACACTCAGCAAGAGGGACTTGACTACATTGAAACATTCTCACCAGTTGCAAAATTGGAATAA

Protein sequence

MAASTVKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIETNKTWTFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAKLE

Homology

[Close]

BLAST of Moc05g10360 vs. NCBI nr
Match: XP_022154919.1 (uncharacterized protein LOC111022065 [Momordica charantia])

HSP 1 Score: 194.1 bits (492), Expect = 7.0e-46
Identity = 89/122 (72.95%), Postives = 102/122 (83.61%), Query Frame = 0


Query: 2   AASTVKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIET 61
           +AS+V YPLQ YL Y+ LS +Y  FVL+V   Y+PQF+HQAV FSHWR+ M AEL A+E 
Sbjct: 692 SASSVFYPLQKYLDYNNLSASYKEFVLSVSCDYEPQFYHQAVPFSHWREAMRAELHAMEA 751

Query: 62  NKTWTFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVA 121
           N TW+ VPLP   HSIGCKWIYKVKH+SDG+IERYKA+LVAKGYTQQEGLDYIETFSPVA
Sbjct: 752 NHTWSVVPLPYEHHSIGCKWIYKVKHKSDGSIERYKARLVAKGYTQQEGLDYIETFSPVA 811

Query: 122 KL 124
           KL
Sbjct: 812 KL 813

[Close]

BLAST of Moc05g10360 vs. NCBI nr
Match: XP_022147774.1 (uncharacterized protein LOC111016631 isoform X1 [Momordica charantia] >XP_022147776.1 uncharacterized protein LOC111016631 isoform X1 [Momordica charantia])

HSP 1 Score: 187.2 bits (474), Expect = 8.6e-44
Identity = 86/123 (69.92%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 1   MAASTVKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIE 60
           +A+S +KY LQ YLSYD+LSP Y  F+LNV T ++P F+H AVS+ HWRD M+AEL A+E
Sbjct: 161 LASSPLKYKLQEYLSYDKLSPGYKRFILNVSTHHEPSFYHHAVSYFHWRDAMNAELLAME 220

Query: 61  TNKTWTFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPV 120
           +N TW+ V LP G HSIGCKW+YKVKH  DG+IERYKA+LVAKGYTQQEGLDYIETFS V
Sbjct: 221 SNNTWSVV-LPPGHHSIGCKWVYKVKHNPDGSIERYKARLVAKGYTQQEGLDYIETFSLV 280

Query: 121 AKL 124
           AKL
Sbjct: 281 AKL 282

[Close]

BLAST of Moc05g10360 vs. NCBI nr
Match: TYK16758.1 (Copia protein [Cucumis melo var. makuwa])

HSP 1 Score: 173.7 bits (439), Expect = 9.8e-40
Identity = 75/119 (63.03%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 5   TVKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIETNKT 64
           + KYP+  YLSY  LSPTY   +L V T  +  F+H+AV    WR+ M AEL+A+ETN+T
Sbjct: 531 STKYPINQYLSYQALSPTYKYSILQVSTKKELSFYHEAVISQEWREAMKAELEAMETNQT 590

Query: 65  WTFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAKL 124
           W+ VPLP G++SIGC+W+YK+KH+ DG+IERYKA+LVAKGYTQQEGLDY ETFSPVAK+
Sbjct: 591 WSIVPLPKGKNSIGCRWVYKIKHKVDGSIERYKARLVAKGYTQQEGLDYFETFSPVAKM 649

[Close]

BLAST of Moc05g10360 vs. NCBI nr
Match: MCH89318.1 (hypothetical protein [Trifolium medium])

HSP 1 Score: 173.3 bits (438), Expect = 1.3e-39
Identity = 72/118 (61.02%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 6   VKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIETNKTW 65
           VKYP+QNYL+YD+L P YN F+  V T Y+P F+HQAVS   WR  M  E+ A+E+N TW
Sbjct: 93  VKYPIQNYLAYDKLLPPYNQFINQVSTIYEPSFYHQAVSSPEWRKAMAEEIVALESNNTW 152

Query: 66  TFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAKL 124
           T  PLP G+ ++GC+WIYKVK+R+DGT++RYKA+LVA+G+TQQ G+D+++TFSPVAKL
Sbjct: 153 TVQPLPPGKKAVGCRWIYKVKYRADGTLDRYKARLVAQGFTQQAGIDFVDTFSPVAKL 210

[Close]

BLAST of Moc05g10360 vs. NCBI nr
Match: MCI05130.1 (retrovirus-related pol polyprotein from transposon [Trifolium medium])

HSP 1 Score: 167.2 bits (422), Expect = 9.2e-38
Identity = 69/118 (58.47%), Postives = 94/118 (79.66%), Query Frame = 0


Query: 6   VKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIETNKTW 65
           VKYP+QN+LSYD+L P+Y  F+  V T Y+P F+HQAVS   WR  M  EL A+E N TW
Sbjct: 135 VKYPIQNHLSYDKLQPSYQQFICQVSTIYEPSFYHQAVSSPEWRKAMAEELAALEANNTW 194

Query: 66  TFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAKL 124
           +  PL  G+ ++GC+WIYKVK+R+DG+++RYKA+LVA+G+TQQ G+D+++TFSPVAKL
Sbjct: 195 SVQPLQQGKKAVGCRWIYKVKYRADGSLDRYKARLVAQGFTQQAGIDFLDTFSPVAKL 252

[Close]

BLAST of Moc05g10360 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-20
Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 17  DRLSPTYNSFVLNVPTTYK--PQFFHQAVSFSHWRDVMDAELKAIETNKTWTFVPLPSGR 76
           ++L+P Y+   L + TT K  P+    A+    W   M  EL A+  NKTW  VP P  +
Sbjct: 10  NKLNPKYS---LTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQ 69

Query: 77  HSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAK 123
           + +GCKW++K K  SDGT++R KA+LVAKG+ Q+EG+ ++ET+SPV +
Sbjct: 70  NILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 114

[Close]

BLAST of Moc05g10360 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.9e-20
Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 20   SPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIETNKTWTFVPLPSGRHSI-G 79
            +P Y S  +++    +P+   QA+    WR+ M +E+ A   N TW  VP P    +I G
Sbjct: 941  NPKY-SLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVG 1000

Query: 80   CKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAK 123
            C+WI+  K+ SDG++ RYKA+LVAKGY Q+ GLDY ETFSPV K
Sbjct: 1001 CRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIK 1043

[Close]

BLAST of Moc05g10360 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.4e-19
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 25   SFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIETNKTWTFVPLPSGRHSI-GCKWIY 84
            S+  ++    +P+   QA+    WR  M +E+ A   N TW  VP P    +I GC+WI+
Sbjct: 928  SYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIF 987

Query: 85   KVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAK 123
              K  SDG++ RYKA+LVAKGY Q+ GLDY ETFSPV K
Sbjct: 988  TKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIK 1026

[Close]

BLAST of Moc05g10360 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-15
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 14  LSYDRLSPTYNSFVLNVPTTYK--PQFFHQAV---SFSHWRDVMDAELKAIETNKTWTFV 73
           +SY+    + N  VLN  T +   P  F +       S W + ++ EL A + N TWT  
Sbjct: 867 ISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTIT 926

Query: 74  PLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAKL 124
             P  ++ +  +W++ VK+   G   RYKA+LVA+G+TQ+  +DY ETF+PVA++
Sbjct: 927 KRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARI 981

[Close]

BLAST of Moc05g10360 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.3e-14
Identity = 31/72 (43.06%), Postives = 50/72 (69.44%), Query Frame = 0


Query: 52  MDAELKAIETNKTWTFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGL 111
           M  E+++++ N T+  V LP G+  + CKW++K+K   D  + RYKA+LV KG+ Q++G+
Sbjct: 830 MQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGI 889

Query: 112 DYIETFSPVAKL 124
           D+ E FSPV K+
Sbjct: 890 DFDEIFSPVVKM 901

[Close]

BLAST of Moc05g10360 vs. ExPASy TrEMBL
Match: A0A6J1DNP7 (uncharacterized protein LOC111022065 OS=Momordica charantia OX=3673 GN=LOC111022065 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.4e-46
Identity = 89/122 (72.95%), Postives = 102/122 (83.61%), Query Frame = 0


Query: 2   AASTVKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIET 61
           +AS+V YPLQ YL Y+ LS +Y  FVL+V   Y+PQF+HQAV FSHWR+ M AEL A+E 
Sbjct: 692 SASSVFYPLQKYLDYNNLSASYKEFVLSVSCDYEPQFYHQAVPFSHWREAMRAELHAMEA 751

Query: 62  NKTWTFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVA 121
           N TW+ VPLP   HSIGCKWIYKVKH+SDG+IERYKA+LVAKGYTQQEGLDYIETFSPVA
Sbjct: 752 NHTWSVVPLPYEHHSIGCKWIYKVKHKSDGSIERYKARLVAKGYTQQEGLDYIETFSPVA 811

Query: 122 KL 124
           KL
Sbjct: 812 KL 813

[Close]

BLAST of Moc05g10360 vs. ExPASy TrEMBL
Match: A0A6J1D203 (uncharacterized protein LOC111016631 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016631 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.2e-44
Identity = 86/123 (69.92%), Postives = 102/123 (82.93%), Query Frame = 0


Query: 1   MAASTVKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIE 60
           +A+S +KY LQ YLSYD+LSP Y  F+LNV T ++P F+H AVS+ HWRD M+AEL A+E
Sbjct: 161 LASSPLKYKLQEYLSYDKLSPGYKRFILNVSTHHEPSFYHHAVSYFHWRDAMNAELLAME 220

Query: 61  TNKTWTFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPV 120
           +N TW+ V LP G HSIGCKW+YKVKH  DG+IERYKA+LVAKGYTQQEGLDYIETFS V
Sbjct: 221 SNNTWSVV-LPPGHHSIGCKWVYKVKHNPDGSIERYKARLVAKGYTQQEGLDYIETFSLV 280

Query: 121 AKL 124
           AKL
Sbjct: 281 AKL 282

[Close]

BLAST of Moc05g10360 vs. ExPASy TrEMBL
Match: A0A5D3CZP1 (Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00100 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.8e-40
Identity = 75/119 (63.03%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 5   TVKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIETNKT 64
           + KYP+  YLSY  LSPTY   +L V T  +  F+H+AV    WR+ M AEL+A+ETN+T
Sbjct: 531 STKYPINQYLSYQALSPTYKYSILQVSTKKELSFYHEAVISQEWREAMKAELEAMETNQT 590

Query: 65  WTFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAKL 124
           W+ VPLP G++SIGC+W+YK+KH+ DG+IERYKA+LVAKGYTQQEGLDY ETFSPVAK+
Sbjct: 591 WSIVPLPKGKNSIGCRWVYKIKHKVDGSIERYKARLVAKGYTQQEGLDYFETFSPVAKM 649

[Close]

BLAST of Moc05g10360 vs. ExPASy TrEMBL
Match: A0A392MRN7 (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0010213 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.2e-40
Identity = 72/118 (61.02%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 6   VKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIETNKTW 65
           VKYP+QNYL+YD+L P YN F+  V T Y+P F+HQAVS   WR  M  E+ A+E+N TW
Sbjct: 93  VKYPIQNYLAYDKLLPPYNQFINQVSTIYEPSFYHQAVSSPEWRKAMAEEIVALESNNTW 152

Query: 66  TFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAKL 124
           T  PLP G+ ++GC+WIYKVK+R+DGT++RYKA+LVA+G+TQQ G+D+++TFSPVAKL
Sbjct: 153 TVQPLPPGKKAVGCRWIYKVKYRADGTLDRYKARLVAQGFTQQAGIDFVDTFSPVAKL 210

[Close]

BLAST of Moc05g10360 vs. ExPASy TrEMBL
Match: A0A2N9H2Y3 (Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS34107 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 8.1e-40
Identity = 78/122 (63.93%), Postives = 93/122 (76.23%), Query Frame = 0


Query: 1    MAASTVKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIE 60
            +A+S   YPL   LSYD LSPT+ +F L+V    +P FFHQA    HW++ M AEL A+E
Sbjct: 1813 LASSGKPYPLSTSLSYDHLSPTHRNFALSVTAILEPSFFHQANQSPHWQEAMFAELAALE 1872

Query: 61   TNKTWTFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPV 120
             N TWT  PLP G+H IGCKW+YKVK +SDG++ERYKA+LVAKGYTQQEGLDY ETFSPV
Sbjct: 1873 ANNTWTLTPLPLGKHPIGCKWVYKVKLKSDGSLERYKARLVAKGYTQQEGLDYSETFSPV 1932

Query: 121  AK 123
            AK
Sbjct: 1933 AK 1934

[Close]

BLAST of Moc05g10360 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 63/121 (52.07%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 3   ASTVKYPLQNYLSYDRLSPTYNSFVLNVPTTYKPQFFHQAVSFSHWRDVMDAELKAIETN 62
           AS   + +  +LSY+++SP Y+SF++ +    +P  +++A  F  W   MD E+ A+ET 
Sbjct: 53  ASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETT 112

Query: 63  KTWTFVPLPSGRHSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAK 122
            TW    LP  +  IGCKW+YK+K+ SDGTIERYKA+LVAKGYTQQEG+D+IETFSPV K
Sbjct: 113 HTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCK 172

Query: 123 L 124
           L
Sbjct: 173 L 173

[Close]

BLAST of Moc05g10360 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 17  DRLSPTYNSFVLNVPTTYK--PQFFHQAVSFSHWRDVMDAELKAIETNKTWTFVPLPSGR 76
           ++L+P Y+   L + TT K  P+    A+    W   M  EL A+  NKTW  VP P  +
Sbjct: 10  NKLNPKYS---LTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQ 69

Query: 77  HSIGCKWIYKVKHRSDGTIERYKAKLVAKGYTQQEGLDYIETFSPVAK 123
           + +GCKW++K K  SDGT++R KA+LVAKG+ Q+EG+ ++ET+SPV +
Sbjct: 70  NILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVR 114

The following BLAST results are available for this feature:

BLAST of Moc05g10360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154919.1	7.0e-46	72.95	uncharacterized protein LOC111022065 [Momordica charantia]	[more]
XP_022147774.1	8.6e-44	69.92	uncharacterized protein LOC111016631 isoform X1 [Momordica charantia] >XP_022147...	[more]
TYK16758.1	9.8e-40	63.03	Copia protein [Cucumis melo var. makuwa]	[more]
MCH89318.1	1.3e-39	61.02	hypothetical protein [Trifolium medium]	[more]
MCI05130.1	9.2e-38	58.47	retrovirus-related pol polyprotein from transposon [Trifolium medium]	[more]

BLAST of Moc05g10360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92520	1.8e-20	43.52	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	6.9e-20	46.15	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.4e-19	46.46	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	1.0e-15	35.65	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	4.3e-14	43.06	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Moc05g10360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNP7	3.4e-46	72.95	uncharacterized protein LOC111022065 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D203	4.2e-44	69.92	uncharacterized protein LOC111016631 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5D3CZP1	4.8e-40	63.03	Copia protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00100 P...	[more]
A0A392MRN7	6.2e-40	61.02	Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) OS=Tri...	[more]
A0A2N9H2Y3	8.1e-40	63.93	Integrase catalytic domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB...	[more]

BLAST of Moc05g10360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.3e-34	52.07	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.3e-21	43.52	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 62..124 e-value: 1.1E-16 score: 61.2
None	No IPR available	PANTHER	PTHR11439:SF302	REVERSE TRANSCRIPTASE, RNA-DEPENDENT DNA POLYMERASE-RELATED	coord: 66..123
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 66..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g10360.1	Moc05g10360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016779	nucleotidyltransferase activity