Moc05g09880 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g09880
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Unknown protein
Location	chr5: 7695085 .. 7695786 (-)
RNA-Seq Expression	Moc05g09880
Synteny	Moc05g09880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATCCTAAAGCGACGCAAAATGGTGAGAACGATTGTAAGTCACCCGCTCGAGAAATCCGAACAATAATGGGAGGTCTGGTAGAGAGAAAATCTTGCAGAAAGAGAAAGGCGAGCATACGAGAAACCAGGACGAGCCTCAGACAACATGAGATCTGCCATGCATTTGTGGTAGAACAACCGACAAAAATCGAGTTCTCAGAGGATGAGGCGACTCACCTCCTTCACCCACATAATGATGCACTGGTCATCACTCTGAAAATAGCCAATGCAAAGGTGCATCGGATCTTGGTAGATGGGGGCAGTTCGACAGATATCATCTCCTTGACAGCCTACAAAGTTATGGATCTAGGAGAGAAAGGGCTTAAGAGTAGCCCGACACCACTGGTAGGGTTTGGAGGAGAACGGGTCATCCCTGAAGGGAGAATAGAATTGCCGGTGTCGTTCGGAAGCGGGCCAAAAAGCATCAGTAAAATGGTAGATTTTTTAGTCGTCGACTACGCATCCTCCTATAATGCGATACTAGGAAGACCAACAACGCACATGCTCAAAGCAATACCATCCACGTACCACCAGTCTATGAAATTCCCAACACCTGGTGGAATATGTGAGATCAAAGGAGAGCAATGAGTATTACATGAGTGCTGCTACACTTCTATGAAGGGTAACGATAGGGCTTCTACTGTGGGTGATCATTGA

mRNA sequence

ATGGAGGATCCTAAAGCGACGCAAAATGGTGAGAACGATTGTAAGTCACCCGCTCGAGAAATCCGAACAATAATGGGAGGTCTGGTAGAGAGAAAATCTTGCAGAAAGAGAAAGGCGAGCATACGAGAAACCAGGACGAGCCTCAGACAACATGAGATCTGCCATGCATTTGTGGTAGAACAACCGACAAAAATCGAGTTCTCAGAGGATGAGGCGACTCACCTCCTTCACCCACATAATGATGCACTGGTCATCACTCTGAAAATAGCCAATGCAAAGGTGCATCGGATCTTGGTAGATGGGGGCAGTTCGACAGATATCATCTCCTTGACAGCCTACAAAGTTATGGATCTAGGAGAGAAAGGGCTTAAGAGTAGCCCGACACCACTGGTAGGGTTTGGAGGAGAACGGGTCATCCCTGAAGGGAGAATAGAATTGCCGGTGTCGTTCGGAAGCGGGCCAAAAAGCATCAGTAAAATGGGTAACGATAGGGCTTCTACTGTGGGTGATCATTGA

Coding sequence (CDS)

ATGGAGGATCCTAAAGCGACGCAAAATGGTGAGAACGATTGTAAGTCACCCGCTCGAGAAATCCGAACAATAATGGGAGGTCTGGTAGAGAGAAAATCTTGCAGAAAGAGAAAGGCGAGCATACGAGAAACCAGGACGAGCCTCAGACAACATGAGATCTGCCATGCATTTGTGGTAGAACAACCGACAAAAATCGAGTTCTCAGAGGATGAGGCGACTCACCTCCTTCACCCACATAATGATGCACTGGTCATCACTCTGAAAATAGCCAATGCAAAGGTGCATCGGATCTTGGTAGATGGGGGCAGTTCGACAGATATCATCTCCTTGACAGCCTACAAAGTTATGGATCTAGGAGAGAAAGGGCTTAAGAGTAGCCCGACACCACTGGTAGGGTTTGGAGGAGAACGGGTCATCCCTGAAGGGAGAATAGAATTGCCGGTGTCGTTCGGAAGCGGGCCAAAAAGCATCAGTAAAATGGGTAACGATAGGGCTTCTACTGTGGGTGATCATTGA

Protein sequence

MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVEQPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGEKGLKSSPTPLVGFGGERVIPEGRIELPVSFGSGPKSISKMGNDRASTVGDH

Homology

[Close]

BLAST of Moc05g09880 vs. NCBI nr
Match: XP_022150028.1 (uncharacterized protein LOC111018300 [Momordica charantia])

HSP 1 Score: 252.7 bits (644), Expect = 2.3e-63
Identity = 131/158 (82.91%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVE 60
           +EDPKATQNGEND KSPAREIRTIMGG +ER+  RKRKASIRETRTS  QHEI H FV +
Sbjct: 69  VEDPKATQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIRETRTSQVQHEIYHTFVAK 128

Query: 61  QPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGE 120
           QP KIEFSEDEATHLLHPHND LVITLKIANAKVHRILVDGGSS DIISLTAYK MDLGE
Sbjct: 129 QPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDGGSSADIISLTAYKAMDLGE 188

Query: 121 KGLKSSPTPLVGFGGERVIPEGRIELPVSFGSGPKSIS 159
           +G KSSP  LV F GERVIPEGR EL V+FGSGPKSI+
Sbjct: 189 RGRKSSPASLVRFRGERVIPEGRTELTVTFGSGPKSIT 226

[Close]

BLAST of Moc05g09880 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-55
Identity = 115/152 (75.66%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 1   MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVE 60
           +E+PKATQNGE+D KSPAREIRTIMGG +ER+S RKRKA +RE RTS  Q+E+ HA+   
Sbjct: 471 VEEPKATQNGESD-KSPAREIRTIMGGPIERESGRKRKADVREARTSREQNEVYHAYTTN 530

Query: 61  QPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGE 120
           +P  IEFSEDEATHLLHPHNDALVI LKIAN KVHR+LVDGGSS DI+S TAYK MDL E
Sbjct: 531 RPVTIEFSEDEATHLLHPHNDALVIXLKIANVKVHRVLVDGGSSADIJSWTAYKAMDLXE 590

Query: 121 KGLKSSPTPLVGFGGERVIPEGRIELPVSFGS 153
           K LK SP PLVGFG ERVIPEGRIELPV+FG+
Sbjct: 591 KVLKXSPAPLVGFGXERVIPEGRIELPVTFGT 621

[Close]

BLAST of Moc05g09880 vs. NCBI nr
Match: XP_022155902.1 (uncharacterized protein LOC111022905 [Momordica charantia])

HSP 1 Score: 210.7 bits (535), Expect = 1.0e-50
Identity = 110/160 (68.75%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVE 60
           +EDPK TQNGEND KSPAREI+TIMGG +E +S RK K  +RE RT+L  +E+ + ++ +
Sbjct: 47  VEDPKVTQNGEND-KSPAREIQTIMGGPIESESGRKIKVDVREARTNLGHNEVYYTYIAD 106

Query: 61  QPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGE 120
           +   IEFS+DEATHLLHPHNDALVITLKIAN KVHRILVDGG+S DIIS TAYKVMD+GE
Sbjct: 107 RSATIEFSKDEATHLLHPHNDALVITLKIANVKVHRILVDGGNSADIISWTAYKVMDVGE 166

Query: 121 KGLKSSPTPLVGFGGERVIPEGRIELPVSFGSGPKSISKM 161
           K LKS+PTPL       VI EGRIE PV+FGSGPKS++KM
Sbjct: 167 KVLKSNPTPL-------VILEGRIESPVTFGSGPKSVTKM 198

[Close]

BLAST of Moc05g09880 vs. NCBI nr
Match: XP_022158828.1 (uncharacterized protein LOC111025292 [Momordica charantia])

HSP 1 Score: 209.9 bits (533), Expect = 1.7e-50
Identity = 109/142 (76.76%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVE 60
           +ED KATQN END KSPAREIRTIMGG +ER+S RKRKA +RE + SL Q+E+ HA+++ 
Sbjct: 47  VEDSKATQNSEND-KSPAREIRTIMGGPIERESGRKRKADVREAKASLGQNEVYHAYIMN 106

Query: 61  QPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGE 120
           Q   IEFSEDEATHLLHPHNDALVITLKIAN KVHRILVDGGSS DIIS TAYK MDLGE
Sbjct: 107 QSVAIEFSEDEATHLLHPHNDALVITLKIANXKVHRILVDGGSSADIISWTAYKAMDLGE 166

Query: 121 KGLKSSPTPLVGFGGERVIPEG 143
           K LKSS  PLVGFGGERV P+G
Sbjct: 167 KVLKSSLAPLVGFGGERVFPKG 187

[Close]

BLAST of Moc05g09880 vs. NCBI nr
Match: XP_022158093.1 (uncharacterized protein LOC111024662 [Momordica charantia])

HSP 1 Score: 209.9 bits (533), Expect = 1.7e-50
Identity = 108/160 (67.50%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 1   MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVE 60
           +EDPKAT N END KSP +EI+TI GG  ER+  +KRKAS++E R S    ++ HA    
Sbjct: 47  VEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVYHASFTG 106

Query: 61  QPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGE 120
           QP+KI+FSEDE T L HPHNDALVITLKI N KVHRILVDGGSST IISLTAYK MDLGE
Sbjct: 107 QPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGE 166

Query: 121 KGLKSSPTPLVGFGGERVIPEGRIELPVSFGSGPKSISKM 161
           K LKS+  PLVGFGGERVI + RI+LPV+FG+GP++I+K+
Sbjct: 167 KALKSNLAPLVGFGGERVIQKCRIKLPVTFGNGPRNITKI 206

[Close]

BLAST of Moc05g09880 vs. ExPASy TrEMBL
Match: A0A6J1D8C9 (uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018300 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.1e-63
Identity = 131/158 (82.91%), Postives = 138/158 (87.34%), Query Frame = 0


Query: 1   MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVE 60
           +EDPKATQNGEND KSPAREIRTIMGG +ER+  RKRKASIRETRTS  QHEI H FV +
Sbjct: 69  VEDPKATQNGENDSKSPAREIRTIMGGPMEREFGRKRKASIRETRTSQVQHEIYHTFVAK 128

Query: 61  QPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGE 120
           QP KIEFSEDEATHLLHPHND LVITLKIANAKVHRILVDGGSS DIISLTAYK MDLGE
Sbjct: 129 QPAKIEFSEDEATHLLHPHNDVLVITLKIANAKVHRILVDGGSSADIISLTAYKAMDLGE 188

Query: 121 KGLKSSPTPLVGFGGERVIPEGRIELPVSFGSGPKSIS 159
           +G KSSP  LV F GERVIPEGR EL V+FGSGPKSI+
Sbjct: 189 RGRKSSPASLVRFRGERVIPEGRTELTVTFGSGPKSIT 226

[Close]

BLAST of Moc05g09880 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 6.5e-56
Identity = 115/152 (75.66%), Postives = 129/152 (84.87%), Query Frame = 0


Query: 1   MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVE 60
           +E+PKATQNGE+D KSPAREIRTIMGG +ER+S RKRKA +RE RTS  Q+E+ HA+   
Sbjct: 471 VEEPKATQNGESD-KSPAREIRTIMGGPIERESGRKRKADVREARTSREQNEVYHAYTTN 530

Query: 61  QPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGE 120
           +P  IEFSEDEATHLLHPHNDALVI LKIAN KVHR+LVDGGSS DI+S TAYK MDL E
Sbjct: 531 RPVTIEFSEDEATHLLHPHNDALVIXLKIANVKVHRVLVDGGSSADILSWTAYKAMDLXE 590

Query: 121 KGLKSSPTPLVGFGGERVIPEGRIELPVSFGS 153
           K LK SP PLVGFG ERVIPEGRIELPV+FG+
Sbjct: 591 KVLKXSPAPLVGFGXERVIPEGRIELPVTFGT 621

[Close]

BLAST of Moc05g09880 vs. ExPASy TrEMBL
Match: A0A6J1DQL9 (uncharacterized protein LOC111022905 OS=Momordica charantia OX=3673 GN=LOC111022905 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.8e-51
Identity = 110/160 (68.75%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVE 60
           +EDPK TQNGEND KSPAREI+TIMGG +E +S RK K  +RE RT+L  +E+ + ++ +
Sbjct: 47  VEDPKVTQNGEND-KSPAREIQTIMGGPIESESGRKIKVDVREARTNLGHNEVYYTYIAD 106

Query: 61  QPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGE 120
           +   IEFS+DEATHLLHPHNDALVITLKIAN KVHRILVDGG+S DIIS TAYKVMD+GE
Sbjct: 107 RSATIEFSKDEATHLLHPHNDALVITLKIANVKVHRILVDGGNSADIISWTAYKVMDVGE 166

Query: 121 KGLKSSPTPLVGFGGERVIPEGRIELPVSFGSGPKSISKM 161
           K LKS+PTPL       VI EGRIE PV+FGSGPKS++KM
Sbjct: 167 KVLKSNPTPL-------VILEGRIESPVTFGSGPKSVTKM 198

[Close]

BLAST of Moc05g09880 vs. ExPASy TrEMBL
Match: A0A6J1DX67 (uncharacterized protein LOC111025292 OS=Momordica charantia OX=3673 GN=LOC111025292 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.3e-51
Identity = 109/142 (76.76%), Postives = 120/142 (84.51%), Query Frame = 0


Query: 1   MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVE 60
           +ED KATQN END KSPAREIRTIMGG +ER+S RKRKA +RE + SL Q+E+ HA+++ 
Sbjct: 47  VEDSKATQNSEND-KSPAREIRTIMGGPIERESGRKRKADVREAKASLGQNEVYHAYIMN 106

Query: 61  QPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGE 120
           Q   IEFSEDEATHLLHPHNDALVITLKIAN KVHRILVDGGSS DIIS TAYK MDLGE
Sbjct: 107 QSVAIEFSEDEATHLLHPHNDALVITLKIANXKVHRILVDGGSSADIISWTAYKAMDLGE 166

Query: 121 KGLKSSPTPLVGFGGERVIPEG 143
           K LKSS  PLVGFGGERV P+G
Sbjct: 167 KVLKSSLAPLVGFGGERVFPKG 187

[Close]

BLAST of Moc05g09880 vs. ExPASy TrEMBL
Match: A0A6J1DV51 (uncharacterized protein LOC111024662 OS=Momordica charantia OX=3673 GN=LOC111024662 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 8.3e-51
Identity = 108/160 (67.50%), Postives = 128/160 (80.00%), Query Frame = 0


Query: 1   MEDPKATQNGENDCKSPAREIRTIMGGLVERKSCRKRKASIRETRTSLRQHEICHAFVVE 60
           +EDPKAT N END KSP +EI+TI GG  ER+  +KRKAS++E R S    ++ HA    
Sbjct: 47  VEDPKATLNSENDDKSPVKEIQTIFGGPTERELGKKRKASMQEARASPGYCKVYHASFTG 106

Query: 61  QPTKIEFSEDEATHLLHPHNDALVITLKIANAKVHRILVDGGSSTDIISLTAYKVMDLGE 120
           QP+KI+FSEDE T L HPHNDALVITLKI N KVHRILVDGGSST IISLTAYK MDLGE
Sbjct: 107 QPSKIKFSEDETTRLFHPHNDALVITLKITNTKVHRILVDGGSSTGIISLTAYKAMDLGE 166

Query: 121 KGLKSSPTPLVGFGGERVIPEGRIELPVSFGSGPKSISKM 161
           K LKS+  PLVGFGGERVI + RI+LPV+FG+GP++I+K+
Sbjct: 167 KALKSNLAPLVGFGGERVIQKCRIKLPVTFGNGPRNITKI 206

The following BLAST results are available for this feature:

BLAST of Moc05g09880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150028.1	2.3e-63	82.91	uncharacterized protein LOC111018300 [Momordica charantia]	[more]
XP_022158830.1	1.0e-55	75.66	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022155902.1	1.0e-50	68.75	uncharacterized protein LOC111022905 [Momordica charantia]	[more]
XP_022158828.1	1.7e-50	76.76	uncharacterized protein LOC111025292 [Momordica charantia]	[more]
XP_022158093.1	1.7e-50	67.50	uncharacterized protein LOC111024662 [Momordica charantia]	[more]

BLAST of Moc05g09880 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g09880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8C9	1.1e-63	82.91	uncharacterized protein LOC111018300 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1DWY0	6.5e-56	75.66	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DQL9	4.8e-51	68.75	uncharacterized protein LOC111022905 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DX67	8.3e-51	76.76	uncharacterized protein LOC111025292 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DV51	8.3e-51	67.50	uncharacterized protein LOC111024662 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Moc05g09880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 67..160 e-value: 3.1E-5 score: 25.6
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 85..158 e-value: 1.87387E-8 score: 47.7164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g09880.1	Moc05g09880.1	mRNA