Moc05g09690 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g09690
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	transcription factor SRM1-like
Location	chr5: 7529725 .. 7530324 (-)
RNA-Seq Expression	Moc05g09690
Synteny	Moc05g09690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAATTCTGAGTTTTTTTATTCCGATTCCGATTTTTATTCTTCCGGCCATTTCCCCGCCGGCCGGACTCCGACTAATGAAAATCATTGTATTGGCAATGACATAATGTCGGATTACTTAACCTATTCTCCTCTTTCTTCGATTCAGTGGGAGCTGGAAGACGGCAGCTCAGCGCTGGACCCCACAACGCCAGTCTCGGATTTGGGTCCATCGCCGTCGCCGGAAAAGAAGAGGAAAGTCACATGTTGGACGAAAGACGAACACAAGTAGTAGTAATCTACTCTGTTTTTTCCCTTATAAAGAAAAAATAATTATAAATTCATCTCCTTCCAATTTGGTTGCAGGCTATTTTTGATTGGACTGCAAATATATGGGAAAGGACATTGGAAAAGCATTGCAACGGAAGTTGCTGTAACAAAAACAGCGGCCCAAGTGGCCAGTCATGCCCAGAAGTTCTACAGCCGTAAACTTTCATCGGAGCAAAGTCGGAAGAGGTCGAGTATTAACGATATCACCACCGTAGATGTGGAGACAATGTCGCGGTTTCTCGCCGGCCGGCCGGCTGTCGCCCACTTCAACCCTCACTCCACTATTTAG

mRNA sequence

ATGCAGAATTCTGAGTTTTTTTATTCCGATTCCGATTTTTATTCTTCCGGCCATTTCCCCGCCGGCCGGACTCCGACTAATGAAAATCATTGTATTGGCAATGACATAATGTCGGATTACTTAACCTATTCTCCTCTTTCTTCGATTCAGTGGGAGCTGGAAGACGGCAGCTCAGCGCTGGACCCCACAACGCCAGTCTCGGATTTGGGTCCATCGCCGTCGCCGGAAAAGAAGAGGAAAGTCACATGTTGGACGAAAGACGAACACAAGCTATTTTTGATTGGACTGCAAATATATGGGAAAGGACATTGGAAAAGCATTGCAACGGAAGTTGCTGTAACAAAAACAGCGGCCCAAGTGGCCAGTCATGCCCAGAAGTTCTACAGCCGTAAACTTTCATCGGAGCAAAGTCGGAAGAGGTCGAGTATTAACGATATCACCACCGTAGATGTGGAGACAATGTCGCGGTTTCTCGCCGGCCGGCCGGCTGTCGCCCACTTCAACCCTCACTCCACTATTTAG

Coding sequence (CDS)

ATGCAGAATTCTGAGTTTTTTTATTCCGATTCCGATTTTTATTCTTCCGGCCATTTCCCCGCCGGCCGGACTCCGACTAATGAAAATCATTGTATTGGCAATGACATAATGTCGGATTACTTAACCTATTCTCCTCTTTCTTCGATTCAGTGGGAGCTGGAAGACGGCAGCTCAGCGCTGGACCCCACAACGCCAGTCTCGGATTTGGGTCCATCGCCGTCGCCGGAAAAGAAGAGGAAAGTCACATGTTGGACGAAAGACGAACACAAGCTATTTTTGATTGGACTGCAAATATATGGGAAAGGACATTGGAAAAGCATTGCAACGGAAGTTGCTGTAACAAAAACAGCGGCCCAAGTGGCCAGTCATGCCCAGAAGTTCTACAGCCGTAAACTTTCATCGGAGCAAAGTCGGAAGAGGTCGAGTATTAACGATATCACCACCGTAGATGTGGAGACAATGTCGCGGTTTCTCGCCGGCCGGCCGGCTGTCGCCCACTTCAACCCTCACTCCACTATTTAG

Protein sequence

MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI

Homology

[Close]

BLAST of Moc05g09690 vs. NCBI nr
Match: XP_022145143.1 (transcription factor SRM1-like [Momordica charantia])

HSP 1 Score: 353.6 bits (906), Expect = 9.7e-94
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSAL 60
           MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSAL
Sbjct: 1   MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSAL 60

Query: 61  DPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQV 120
           DPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQV
Sbjct: 61  DPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQV 120

Query: 121 ASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI 174
           ASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI
Sbjct: 121 ASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI 173

[Close]

BLAST of Moc05g09690 vs. NCBI nr
Match: XP_021730551.1 (transcription factor SRM1-like [Chenopodium quinoa] >XP_021773490.1 transcription factor SRM1-like [Chenopodium quinoa])

HSP 1 Score: 102.1 bits (253), Expect = 5.1e-18
Identity = 52/94 (55.32%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 71  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSR 130
           P  +  +++K T WT++EH+LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R
Sbjct: 107 PKQNDVERKKGTPWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYYLR 166

Query: 131 KLSSEQSRKRSSINDITTVDVETMSRFLAGRPAV 165
           + S ++ RKRSSI+DITTVD ++     A RPAV
Sbjct: 167 QNSGKKERKRSSIHDITTVDEKS-----AARPAV 195

[Close]

BLAST of Moc05g09690 vs. NCBI nr
Match: XP_010695074.1 (PREDICTED: transcription factor DIVARICATA [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 101.3 bits (251), Expect = 8.7e-18
Identity = 49/96 (51.04%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 71  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSR 130
           P  +  +++K T WT++EH+LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R
Sbjct: 102 PKHNEVERKKGTPWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYYLR 161

Query: 131 KLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH 167
           + S ++ RKRSSI+DITTVD +  ++ + G   + H
Sbjct: 162 QNSGKKERKRSSIHDITTVDEKLAAQSVPGGNTMEH 197

[Close]

BLAST of Moc05g09690 vs. NCBI nr
Match: KMS97920.1 (hypothetical protein BVRB_4g097390 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 101.3 bits (251), Expect = 8.7e-18
Identity = 49/96 (51.04%), Postives = 70/96 (72.92%), Query Frame = 0


Query: 71  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSR 130
           P  +  +++K T WT++EH+LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R
Sbjct: 163 PKHNEVERKKGTPWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYYLR 222

Query: 131 KLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH 167
           + S ++ RKRSSI+DITTVD +  ++ + G   + H
Sbjct: 223 QNSGKKERKRSSIHDITTVDEKLAAQSVPGGNTMEH 258

[Close]

BLAST of Moc05g09690 vs. NCBI nr
Match: XP_038690692.1 (transcription factor DIVARICATA-like [Tripterygium wilfordii] >KAF5729399.1 hypothetical protein HS088_TW21G01564 [Tripterygium wilfordii])

HSP 1 Score: 101.3 bits (251), Expect = 8.7e-18
Identity = 48/80 (60.00%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 71  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSR 130
           P P   +++K T WT++EHKLFLIGL+ +GKG W+SI+  V VT+TA QVASHAQK++ R
Sbjct: 96  PKPKEGERKKGTPWTEEEHKLFLIGLEKFGKGDWRSISRNVVVTRTATQVASHAQKYFLR 155

Query: 131 KLSSEQSRKRSSINDITTVD 151
           + S ++ RKRSSI+DITTVD
Sbjct: 156 QCSVKKERKRSSIHDITTVD 175

[Close]

BLAST of Moc05g09690 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.0e-18
Identity = 48/95 (50.53%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 70  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYS 129
           G S S +++RK   WT+DEH+LFL+GL  YGKG W+SI+    VT+T  QVASHAQK++ 
Sbjct: 106 GKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 165

Query: 130 RKLSSEQSRKRSSINDITTV---DVETMSRFLAGR 162
           R  S  + R+RSSI+DIT+V   DV T    + G+
Sbjct: 166 RLNSMNKDRRRSSIHDITSVGNADVSTPQGPITGQ 200

[Close]

BLAST of Moc05g09690 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 40/79 (50.63%), Postives = 63/79 (79.75%), Query Frame = 0


Query: 73  PSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKL 132
           PS ++++K   WT++EHKLFL+GL+ YGKG W++I+    +T+T  QVASHAQK++ R+L
Sbjct: 123 PSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQL 182

Query: 133 SSEQSRKRSSINDITTVDV 152
           S  + ++R+SI+DITTV++
Sbjct: 183 SGGKDKRRASIHDITTVNL 201

[Close]

BLAST of Moc05g09690 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-16
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 72  SPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRK 131
           S + +++RK   WT++EH+LFL+GL  +GKG W+SI+    +++T  QVASHAQK++ R 
Sbjct: 132 SKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRL 191

Query: 132 LSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH 167
            S  + R+RSSI+DIT+V          G P   H
Sbjct: 192 NSMNRDRRRSSIHDITSVTAGDQVAAQQGAPITGH 226

[Close]

BLAST of Moc05g09690 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-16
Identity = 41/95 (43.16%), Postives = 61/95 (64.21%), Query Frame = 0


Query: 72  SPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRK 131
           S + +++RK   WT++EH+LFL+GL  +GKG W+SI+    +++T  QVASHAQK++ R 
Sbjct: 132 SKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRL 191

Query: 132 LSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAH 167
            S  + R+RSSI+DIT+V          G P   H
Sbjct: 192 NSMNRDRRRSSIHDITSVTAGDQVAAQQGAPITGH 226

[Close]

BLAST of Moc05g09690 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.6e-14
Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 0


Query: 76  EKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSE 135
           E+KR V  WT++EHKLFL+GLQ  GKG W+ I+     T+T  QVASHAQK++ R+ +  
Sbjct: 90  ERKRGVP-WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLN 149

Query: 136 QSRKRSSINDITTVDVETM 155
           + R+RSS+ DITT  V  M
Sbjct: 150 RRRRRSSLFDITTDSVSVM 167

[Close]

BLAST of Moc05g09690 vs. ExPASy TrEMBL
Match: A0A6J1CV56 (transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 4.7e-94
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSAL 60
           MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSAL
Sbjct: 1   MQNSEFFYSDSDFYSSGHFPAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSAL 60

Query: 61  DPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQV 120
           DPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQV
Sbjct: 61  DPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQV 120

Query: 121 ASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI 174
           ASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI
Sbjct: 121 ASHAQKFYSRKLSSEQSRKRSSINDITTVDVETMSRFLAGRPAVAHFNPHSTI 173

[Close]

BLAST of Moc05g09690 vs. ExPASy TrEMBL
Match: A0A7C8ZAH3 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.0e-19
Identity = 54/94 (57.45%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 71  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSR 130
           P  S  +++K T WT++EH+LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R
Sbjct: 106 PKHSEAERKKGTPWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYYLR 165

Query: 131 KLSSEQSRKRSSINDITTVDVETMSRFLAGRPAV 165
           + S ++ RKRSSI+DITTVD +T     A RPAV
Sbjct: 166 QNSGKKERKRSSIHDITTVDDKT-----AARPAV 194

[Close]

BLAST of Moc05g09690 vs. ExPASy TrEMBL
Match: A0A803N8C1 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.5e-18
Identity = 52/94 (55.32%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 71  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSR 130
           P  +  +++K T WT++EH+LFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK+Y R
Sbjct: 107 PKQNDVERKKGTPWTEEEHRLFLIGLEKYGKGDWRSISRNVVVTRTPTQVASHAQKYYLR 166

Query: 131 KLSSEQSRKRSSINDITTVDVETMSRFLAGRPAV 165
           + S ++ RKRSSI+DITTVD ++     A RPAV
Sbjct: 167 QNSGKKERKRSSIHDITTVDEKS-----AARPAV 195

[Close]

BLAST of Moc05g09690 vs. ExPASy TrEMBL
Match: A0A6A2YSL0 (Transcription factor DIVARICATA OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111238pilonHSYRG00070 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.2e-18
Identity = 52/96 (54.17%), Postives = 68/96 (70.83%), Query Frame = 0


Query: 55  DGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVT 114
           D SSAL        +  +    +KRK T WT++EHKLFLIGLQ +GKG W+SI+  V +T
Sbjct: 90  DDSSALSSCDSEKQISFTSKDNEKRKGTPWTEEEHKLFLIGLQKFGKGDWRSISRNVVIT 149

Query: 115 KTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVD 151
           +T  QVASHAQK++ R+ S ++ RKRSSI+DITTVD
Sbjct: 150 RTPTQVASHAQKYFLRQSSVKKERKRSSIHDITTVD 185

[Close]

BLAST of Moc05g09690 vs. ExPASy TrEMBL
Match: A0A7J7C5I7 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW21G01564 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.2e-18
Identity = 48/80 (60.00%), Postives = 64/80 (80.00%), Query Frame = 0


Query: 71  PSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSR 130
           P P   +++K T WT++EHKLFLIGL+ +GKG W+SI+  V VT+TA QVASHAQK++ R
Sbjct: 96  PKPKEGERKKGTPWTEEEHKLFLIGLEKFGKGDWRSISRNVVVTRTATQVASHAQKYFLR 155

Query: 131 KLSSEQSRKRSSINDITTVD 151
           + S ++ RKRSSI+DITTVD
Sbjct: 156 QCSVKKERKRSSIHDITTVD 175

[Close]

BLAST of Moc05g09690 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 7.5e-20
Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 70  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYS 129
           G      ++++ T WT++EHKLFLIGL+ YGKG W+SI+  V VT+T  QVASHAQK++ 
Sbjct: 87  GSKHGESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFL 146

Query: 130 RKLSSEQSRKRSSINDITTVD 151
           R+ S ++ RKRSSI+DITTVD
Sbjct: 147 RQNSVKKERKRSSIHDITTVD 167

[Close]

BLAST of Moc05g09690 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19
Identity = 45/86 (52.33%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 67  SDLGPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQK 126
           S  G SP  E+K+ V  WT++EHKLFL+GL+ YGKG W++I+    +T+T  QVASHAQK
Sbjct: 127 SQAGRSPELERKKGVP-WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQK 186

Query: 127 FYSRKLSSEQSRKRSSINDITTVDVE 153
           ++ R+LS  + ++R+SI+DITTV++E
Sbjct: 187 YFIRQLSGGKDKRRASIHDITTVNLE 211

[Close]

BLAST of Moc05g09690 vs. TAIR 10
Match: AT5G01200.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 2.2e-19
Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 38  SDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKV-TCWTKDEHKLFLIGL 97
           SDY      SS  ++   G     P   ++D   SP PEK+RK    WT+DEH  FL+GL
Sbjct: 103 SDYFFGLENSSYGYDYVVGGKRSSPA--MTDCFRSPMPEKERKKGVPWTEDEHLRFLMGL 162

Query: 98  QIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSRKRSSINDITTVDV 152
           + YGKG W++IA     T+T  QVASHAQK++ R+L+  + ++RSSI+DITTV++
Sbjct: 163 KKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDGKDKRRSSIHDITTVNI 215

[Close]

BLAST of Moc05g09690 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 2.9e-19
Identity = 48/95 (50.53%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 70  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYS 129
           G S S +++RK   WT+DEH+LFL+GL  YGKG W+SI+    VT+T  QVASHAQK++ 
Sbjct: 106 GKSKSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI 165

Query: 130 RKLSSEQSRKRSSINDITTV---DVETMSRFLAGR 162
           R  S  + R+RSSI+DIT+V   DV T    + G+
Sbjct: 166 RLNSMNKDRRRSSIHDITSVGNADVSTPQGPITGQ 200

[Close]

BLAST of Moc05g09690 vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 4.6e-17
Identity = 40/81 (49.38%), Postives = 60/81 (74.07%), Query Frame = 0


Query: 70  GPSPSPEKKRKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYS 129
           G S + +++RK   WT++EH+LFL+GL  +GKG W+SI+    +++T  QVASHAQK++ 
Sbjct: 122 GGSRAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI 181

Query: 130 RKLSSEQSRKRSSINDITTVD 151
           R  S  + R+RSSI+DITTV+
Sbjct: 182 RLNSMNRDRRRSSIHDITTVN 202

The following BLAST results are available for this feature:

BLAST of Moc05g09690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145143.1	9.7e-94	100.00	transcription factor SRM1-like [Momordica charantia]	[more]
XP_021730551.1	5.1e-18	55.32	transcription factor SRM1-like [Chenopodium quinoa] >XP_021773490.1 transcriptio...	[more]
XP_010695074.1	8.7e-18	51.04	PREDICTED: transcription factor DIVARICATA [Beta vulgaris subsp. vulgaris]	[more]
KMS97920.1	8.7e-18	51.04	hypothetical protein BVRB_4g097390 [Beta vulgaris subsp. vulgaris]	[more]
XP_038690692.1	8.7e-18	60.00	transcription factor DIVARICATA-like [Tripterygium wilfordii] >KAF5729399.1 hypo...	[more]

BLAST of Moc05g09690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNN6	4.0e-18	50.53	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
Q8S9H7	1.2e-17	50.63	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
B8A9B2	4.9e-16	43.16	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	4.9e-16	43.16	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]
Q2V9B0	1.6e-14	51.90	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]

BLAST of Moc05g09690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CV56	4.7e-94	100.00	transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE...	[more]
A0A7C8ZAH3	5.0e-19	57.45	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]
A0A803N8C1	2.5e-18	55.32	Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	[more]
A0A6A2YSL0	4.2e-18	54.17	Transcription factor DIVARICATA OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111...	[more]
A0A7J7C5I7	4.2e-18	60.00	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW21G01564 ...	[more]

BLAST of Moc05g09690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04760.1	7.5e-20	56.79	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	1.7e-19	52.33	Homeodomain-like transcriptional regulator	[more]
AT5G01200.1	2.2e-19	45.22	Duplicated homeodomain-like superfamily protein	[more]
AT5G08520.1	2.9e-19	50.53	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	4.6e-17	49.38	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 80..130 e-value: 6.5E-8 score: 42.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 76..128 score: 6.155979
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 84..127 e-value: 1.87864E-8 score: 46.4146
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 83..126 e-value: 2.4E-9 score: 37.3
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 76..132 score: 17.914526
None	No IPR available	GENE3D	1.10.10.60		coord: 82..132 e-value: 3.1E-15 score: 58.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..79
None	No IPR available	PANTHER	PTHR44191:SF13	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	coord: 71..153
None	No IPR available	PANTHER	PTHR44191	TRANSCRIPTION FACTOR KUA1	coord: 71..153
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 82..130 e-value: 2.0E-14 score: 51.6
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 78..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g09690.1	Moc05g09690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding