Moc05g09670 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g09670
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	transcription factor DIVARICATA-like
Location	chr5: 7504175 .. 7504930 (+)
RNA-Seq Expression	Moc05g09670
Synteny	Moc05g09670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGCAGCTTTCTCCTCTTCTGTCGTTGGATGATTGGGATGTTGATGGGTTTTATAATGAGACCATGCCGTTGCCGTCGTCGGCGCCAGCGCCGGAGGTTAGAGAAGAAATGGAGCTCGTCAACTGCGACAATAATCCTTCTCCAATGGTGTTGCTGGAGTTATCCTCCGACGACGCGGCGGAGACAACAATAACGAGCGTCCTTCTTTCCGCCGTCAACTCGGCGGTGAATTTGCCGGATAGACCTGGAGCTGAAGAAGCTGGCAGTGGCAATTTACCTGTCAGGCGTTGGACCAAGGACGAACACATGTAAGTATTGCGCTCTCGATCTCTTTTTCCCAAACAATATATATATAGGAATCTCTAGATGTGCATGAATTTCCACTTCTGATCCTTTAAAGTTTCTCCATCATAGTTCTGTTTGGGTTGCAGGTTATTTTTATTGGGGGAGGAGAAGTATGGGAAAGGAAACTGGAAAGAAATTTCCACAAAAATGGCGGTCACAAAAACATCTACCCAGGTGACCAGCCATGCCCAAAAGTACCACAAGTACAACCAAAACCCTAATTCAAAACAGCGAAATGGGAAGAGCTGCATATCCAAGTCTAGTATTTTCGGCATCACGGCCGTAGATCCCCACTCTATGGCGTGCCTACTTCGCCGTCGTGTTGCACCGGCCGCCATTCAACCACCGTTGACGCTACCGCAGATTCAACAATTTACCATTACCAATTACTTTCCTTGCGTTTGA

mRNA sequence

ATGGAAGAGCAGCTTTCTCCTCTTCTGTCGTTGGATGATTGGGATGTTGATGGGTTTTATAATGAGACCATGCCGTTGCCGTCGTCGGCGCCAGCGCCGGAGGTTAGAGAAGAAATGGAGCTCGTCAACTGCGACAATAATCCTTCTCCAATGGTGTTGCTGGAGTTATCCTCCGACGACGCGGCGGAGACAACAATAACGAGCGTCCTTCTTTCCGCCGTCAACTCGGCGGTGAATTTGCCGGATAGACCTGGAGCTGAAGAAGCTGGCAGTGGCAATTTACCTGTCAGGCGTTGGACCAAGGACGAACACATGTTATTTTTATTGGGGGAGGAGAAGTATGGGAAAGGAAACTGGAAAGAAATTTCCACAAAAATGGCGGTCACAAAAACATCTACCCAGGTGACCAGCCATGCCCAAAAGTACCACAAGTACAACCAAAACCCTAATTCAAAACAGCGAAATGGGAAGAGCTGCATATCCAAGTCTAGTATTTTCGGCATCACGGCCGTAGATCCCCACTCTATGGCGTGCCTACTTCGCCGTCGTGTTGCACCGGCCGCCATTCAACCACCGTTGACGCTACCGCAGATTCAACAATTTACCATTACCAATTACTTTCCTTGCGTTTGA

Coding sequence (CDS)

ATGGAAGAGCAGCTTTCTCCTCTTCTGTCGTTGGATGATTGGGATGTTGATGGGTTTTATAATGAGACCATGCCGTTGCCGTCGTCGGCGCCAGCGCCGGAGGTTAGAGAAGAAATGGAGCTCGTCAACTGCGACAATAATCCTTCTCCAATGGTGTTGCTGGAGTTATCCTCCGACGACGCGGCGGAGACAACAATAACGAGCGTCCTTCTTTCCGCCGTCAACTCGGCGGTGAATTTGCCGGATAGACCTGGAGCTGAAGAAGCTGGCAGTGGCAATTTACCTGTCAGGCGTTGGACCAAGGACGAACACATGTTATTTTTATTGGGGGAGGAGAAGTATGGGAAAGGAAACTGGAAAGAAATTTCCACAAAAATGGCGGTCACAAAAACATCTACCCAGGTGACCAGCCATGCCCAAAAGTACCACAAGTACAACCAAAACCCTAATTCAAAACAGCGAAATGGGAAGAGCTGCATATCCAAGTCTAGTATTTTCGGCATCACGGCCGTAGATCCCCACTCTATGGCGTGCCTACTTCGCCGTCGTGTTGCACCGGCCGCCATTCAACCACCGTTGACGCTACCGCAGATTCAACAATTTACCATTACCAATTACTTTCCTTGCGTTTGA

Protein sequence

MEEQLSPLLSLDDWDVDGFYNETMPLPSSAPAPEVREEMELVNCDNNPSPMVLLELSSDDAAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPHSMACLLRRRVAPAAIQPPLTLPQIQQFTITNYFPCV

Homology

[Close]

BLAST of Moc05g09670 vs. NCBI nr
Match: XP_022145147.1 (uncharacterized protein LOC111014661 [Momordica charantia])

HSP 1 Score: 421.8 bits (1083), Expect = 3.5e-114
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MEEQLSPLLSLDDWDVDGFYNETMPLPSSAPAPEVREEMELVNCDNNPSPMVLLELSSDD 60
           MEEQLSPLLSLDDWDVDGFYNETMPLPSSAPAPEVREEMELVNCDNNPSPMVLLELSSDD
Sbjct: 73  MEEQLSPLLSLDDWDVDGFYNETMPLPSSAPAPEVREEMELVNCDNNPSPMVLLELSSDD 132

Query: 61  AAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWK 120
           AAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWK
Sbjct: 133 AAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWK 192

Query: 121 EISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPHSMACLL 180
           EISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPHSMACLL
Sbjct: 193 EISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPHSMACLL 252

Query: 181 RRRVAPAAIQPPLTLPQIQQFTITNYFPCV 211
           RRRVAPAAIQPPLTLPQIQQFTITNYFPCV
Sbjct: 253 RRRVAPAAIQPPLTLPQIQQFTITNYFPCV 282

[Close]

BLAST of Moc05g09670 vs. NCBI nr
Match: XP_022145130.1 (transcription factor DIVARICATA-like [Momordica charantia])

HSP 1 Score: 330.1 bits (845), Expect = 1.4e-86
Identity = 173/214 (80.84%), Postives = 185/214 (86.45%), Query Frame = 0


Query: 1   MEEQLSPLLSLDDWDVDGFYNETMPLPSS-APAPEVREEM----ELVNCDNNPSPMVLLE 60
           MEEQL PLLSLDDWD+DGFYNETMPLPS+ APAPEVR+EM    ELVN DNNPSPMVLLE
Sbjct: 1   MEEQLPPLLSLDDWDIDGFYNETMPLPSAPAPAPEVRQEMQFPVELVNSDNNPSPMVLLE 60

Query: 61  LSS-DDAAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKY 120
           LSS DD AETT T+VLLS V+SAVNLP+RPGAEEAGSGNLPVRRWTKDEHMLFL+G EKY
Sbjct: 61  LSSDDDVAETTTTNVLLSDVSSAVNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKY 120

Query: 121 GKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPH 180
           G GNWKEI+T+  VT+TSTQV SHAQKY KY QNPN  QRNGKSC SKSSIF ITAVDPH
Sbjct: 121 GNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVDPH 180

Query: 181 SMACLLRRRVAPAAIQPPLTLPQIQQFTITNYFP 209
           S   LLRRR APAAIQPPL   Q+QQFTITNY+P
Sbjct: 181 SRVRLLRRRRAPAAIQPPLPPLQVQQFTITNYYP 214

[Close]

BLAST of Moc05g09670 vs. NCBI nr
Match: XP_039012789.1 (transcription factor DIVARICATA-like [Hibiscus syriacus])

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-12
Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT++EH LFLLG  KYGKG+W+ IS  + VT+TSTQV SHAQKY +       +Q +GK 
Sbjct: 120 WTEEEHRLFLLGLSKYGKGDWRSISRNVVVTRTSTQVASHAQKYFQ-------RQNSGKK 179

Query: 159 CISKSSIFGITAVDPHSMACLLRRRVAPAAI 190
              +SSI  IT VD H M   + + +  A I
Sbjct: 180 ERKRSSIHDITTVDTHMMDLRVEQNMLSAPI 203

[Close]

BLAST of Moc05g09670 vs. NCBI nr
Match: KAE8692976.1 (Transcription factor DIVARICATA [Hibiscus syriacus])

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-12
Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT++EH LFLLG  KYGKG+W+ IS  + VT+TSTQV SHAQKY +       +Q +GK 
Sbjct: 120 WTEEEHRLFLLGLSKYGKGDWRSISRNVVVTRTSTQVASHAQKYFQ-------RQNSGKK 179

Query: 159 CISKSSIFGITAVDPHSMACLLRRRVAPAAIQPPLTLP 197
              +SSI  IT VD H M   + + +  A I     LP
Sbjct: 180 ERKRSSIHDITTVDTHMMDLRVEQNMLSAPIGNVRQLP 210

[Close]

BLAST of Moc05g09670 vs. NCBI nr
Match: XP_022145143.1 (transcription factor SRM1-like [Momordica charantia])

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-11
Identity = 51/146 (34.93%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 55  ELSSDDAAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRR-----WTKDEHMLFLL 114
           ++ SD    + ++S+     + +  L       + G    P ++     WTKDEH LFL+
Sbjct: 35  DIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLI 94

Query: 115 GEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGIT 174
           G + YGKG+WK I+T++AVTKT+ QV SHAQK++       S++ + +    +SSI  IT
Sbjct: 95  GLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFY-------SRKLSSEQSRKRSSINDIT 154

Query: 175 AVDPHSMACLLRRRVAPAAIQPPLTL 196
            VD  +M+  L  R A A   P  T+
Sbjct: 155 TVDVETMSRFLAGRPAVAHFNPHSTI 173

[Close]

BLAST of Moc05g09670 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-11
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT+DEH LFLLG +KYGKG+W+ IS    VT+T TQV SHAQKY     + N  +R    
Sbjct: 120 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR---- 179

Query: 159 CISKSSIFGITAV 172
              +SSI  IT+V
Sbjct: 180 ---RSSIHDITSV 185

[Close]

BLAST of Moc05g09670 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.4e-11
Identity = 45/110 (40.91%), Postives = 56/110 (50.91%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT++EH LFLLG +K GKG+W+ IS     T+T TQV SHAQKY     N N ++R    
Sbjct: 97  WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRR---- 156

Query: 159 CISKSSIFGITAVDPHSMACLLRRRVAPAAIQPPLTLPQIQQFTITNYFP 209
              +SS+F IT      M            +  P TLP     T TN FP
Sbjct: 157 ---RSSLFDITTDSVSVMPIEEVENKQEIPVVAPATLPT----TKTNAFP 195

[Close]

BLAST of Moc05g09670 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 83  RPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKY 142
           RP  +E   G +P   WT++EH LFL+G +KYGKG+W+ IS    +T+T TQV SHAQKY
Sbjct: 122 RPSEQERKKG-VP---WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 181

Query: 143 HKYNQNPNSKQRNGKSCISKSSIFGITAVD 173
                    +Q +G     ++SI  IT V+
Sbjct: 182 F-------IRQLSGGKDKRRASIHDITTVN 200

[Close]

BLAST of Moc05g09670 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT++EH LFLLG +K+GKG+W+ IS    +++T TQV SHAQKY     + N  +R    
Sbjct: 144 WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRR---- 203

Query: 159 CISKSSIFGITAV 172
              +SSI  IT+V
Sbjct: 204 ---RSSIHDITSV 209

[Close]

BLAST of Moc05g09670 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT++EH LFLLG +K+GKG+W+ IS    +++T TQV SHAQKY     + N  +R    
Sbjct: 144 WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRR---- 203

Query: 159 CISKSSIFGITAV 172
              +SSI  IT+V
Sbjct: 204 ---RSSIHDITSV 209

[Close]

BLAST of Moc05g09670 vs. ExPASy TrEMBL
Match: A0A6J1CVN6 (uncharacterized protein LOC111014661 OS=Momordica charantia OX=3673 GN=LOC111014661 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.7e-114
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MEEQLSPLLSLDDWDVDGFYNETMPLPSSAPAPEVREEMELVNCDNNPSPMVLLELSSDD 60
           MEEQLSPLLSLDDWDVDGFYNETMPLPSSAPAPEVREEMELVNCDNNPSPMVLLELSSDD
Sbjct: 73  MEEQLSPLLSLDDWDVDGFYNETMPLPSSAPAPEVREEMELVNCDNNPSPMVLLELSSDD 132

Query: 61  AAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWK 120
           AAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWK
Sbjct: 133 AAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWK 192

Query: 121 EISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPHSMACLL 180
           EISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPHSMACLL
Sbjct: 193 EISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPHSMACLL 252

Query: 181 RRRVAPAAIQPPLTLPQIQQFTITNYFPCV 211
           RRRVAPAAIQPPLTLPQIQQFTITNYFPCV
Sbjct: 253 RRRVAPAAIQPPLTLPQIQQFTITNYFPCV 282

[Close]

BLAST of Moc05g09670 vs. ExPASy TrEMBL
Match: A0A6J1CTL3 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111014647 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 6.7e-87
Identity = 173/214 (80.84%), Postives = 185/214 (86.45%), Query Frame = 0


Query: 1   MEEQLSPLLSLDDWDVDGFYNETMPLPSS-APAPEVREEM----ELVNCDNNPSPMVLLE 60
           MEEQL PLLSLDDWD+DGFYNETMPLPS+ APAPEVR+EM    ELVN DNNPSPMVLLE
Sbjct: 1   MEEQLPPLLSLDDWDIDGFYNETMPLPSAPAPAPEVRQEMQFPVELVNSDNNPSPMVLLE 60

Query: 61  LSS-DDAAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKY 120
           LSS DD AETT T+VLLS V+SAVNLP+RPGAEEAGSGNLPVRRWTKDEHMLFL+G EKY
Sbjct: 61  LSSDDDVAETTTTNVLLSDVSSAVNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEKY 120

Query: 121 GKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPH 180
           G GNWKEI+T+  VT+TSTQV SHAQKY KY QNPN  QRNGKSC SKSSIF ITAVDPH
Sbjct: 121 GNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVDPH 180

Query: 181 SMACLLRRRVAPAAIQPPLTLPQIQQFTITNYFP 209
           S   LLRRR APAAIQPPL   Q+QQFTITNY+P
Sbjct: 181 SRVRLLRRRRAPAAIQPPLPPLQVQQFTITNYYP 214

[Close]

BLAST of Moc05g09670 vs. ExPASy TrEMBL
Match: A0A6A2ZN51 (Transcription factor DIVARICATA OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110819pilonHSYRG00103 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-12
Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT++EH LFLLG  KYGKG+W+ IS  + VT+TSTQV SHAQKY +       +Q +GK 
Sbjct: 120 WTEEEHRLFLLGLSKYGKGDWRSISRNVVVTRTSTQVASHAQKYFQ-------RQNSGKK 179

Query: 159 CISKSSIFGITAVDPHSMACLLRRRVAPAAIQPPLTLP 197
              +SSI  IT VD H M   + + +  A I     LP
Sbjct: 180 ERKRSSIHDITTVDTHMMDLRVEQNMLSAPIGNVRQLP 210

[Close]

BLAST of Moc05g09670 vs. ExPASy TrEMBL
Match: A0A6J1CV56 (transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11
Identity = 51/146 (34.93%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 55  ELSSDDAAETTITSVLLSAVNSAVNLPDRPGAEEAGSGNLPVRR-----WTKDEHMLFLL 114
           ++ SD    + ++S+     + +  L       + G    P ++     WTKDEH LFL+
Sbjct: 35  DIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSDLGPSPSPEKKRKVTCWTKDEHKLFLI 94

Query: 115 GEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGIT 174
           G + YGKG+WK I+T++AVTKT+ QV SHAQK++       S++ + +    +SSI  IT
Sbjct: 95  GLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFY-------SRKLSSEQSRKRSSINDIT 154

Query: 175 AVDPHSMACLLRRRVAPAAIQPPLTL 196
            VD  +M+  L  R A A   P  T+
Sbjct: 155 TVDVETMSRFLAGRPAVAHFNPHSTI 173

[Close]

BLAST of Moc05g09670 vs. ExPASy TrEMBL
Match: A0A6A2YB53 (Transcription factor DIVARICATA OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111708pilonHSYRG00243 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.6e-11
Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT++EH LFLLG  ++GKG+W+ IS  + VT+TSTQV SHAQKY +  QN   K+R    
Sbjct: 132 WTEEEHKLFLLGLSRFGKGDWRSISRNVVVTRTSTQVASHAQKYFQ-RQNSMKKER---- 191

Query: 159 CISKSSIFGITAVDPHSMACLLRRRVAPAAIQ 191
              +SSI  IT VD H    L+ + + P  ++
Sbjct: 192 --KRSSIHDITTVDTHVTDLLVEQNMVPGTVR 216

[Close]

BLAST of Moc05g09670 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT++EH LFL+G ++YGKG+W+ IS  + VT+T TQV SHAQKY    QN   K+R    
Sbjct: 101 WTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYF-LRQNSVKKER---- 160

Query: 159 CISKSSIFGITAVD 173
              +SSI  IT VD
Sbjct: 161 --KRSSIHDITTVD 167

[Close]

BLAST of Moc05g09670 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT+DEH LFLLG +KYGKG+W+ IS    VT+T TQV SHAQKY     + N  +R    
Sbjct: 120 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRR---- 179

Query: 159 CISKSSIFGITAV 172
              +SSI  IT+V
Sbjct: 180 ---RSSIHDITSV 185

[Close]

BLAST of Moc05g09670 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT++EH LFL+G +KYGKG+W+ IS    +T+T TQV SHAQKY         +Q +G  
Sbjct: 143 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYF-------IRQLSGGK 202

Query: 159 CISKSSIFGITAVDPHSMACL 180
              ++SI  IT V+    A L
Sbjct: 203 DKRRASIHDITTVNLEEEASL 216

[Close]

BLAST of Moc05g09670 vs. TAIR 10
Match: AT1G74840.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-11
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 99  WTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKS 158
           WT++EH LFLLG ++ GKG+WK IS     T+TSTQV SHAQKY     N N ++R    
Sbjct: 98  WTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRR---- 157

Query: 159 CISKSSIFGITAVDPHSMACLLRRRVAPAAIQPPLTLPQIQQFTI 204
              +SS+F +T      M    +  +     Q    +P+I  F+I
Sbjct: 158 ---RSSLFDMTTDTVIPMEEDHQVLIQENTSQSSSPVPEINNFSI 195

[Close]

BLAST of Moc05g09670 vs. TAIR 10
Match: AT1G19000.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.7e-11
Identity = 45/122 (36.89%), Postives = 64/122 (52.46%), Query Frame = 0


Query: 59  DDAAETTITSVL---LSAVNSAVNLPDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYG 118
           +D  ET  T ++    ++ N AV +    G  + G   +P   WT++EH  FL+G +K G
Sbjct: 67  EDKNETDATVIVADGYASANDAVQISSSSGGRKRG---VP---WTENEHKRFLIGLQKVG 126

Query: 119 KGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPHS 178
           KG+WK IS     ++T TQV SHAQKY     N N ++R       +SS+F IT      
Sbjct: 127 KGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRRRR-------RSSLFDITTETVTE 175

The following BLAST results are available for this feature:

BLAST of Moc05g09670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145147.1	3.5e-114	100.00	uncharacterized protein LOC111014661 [Momordica charantia]	[more]
XP_022145130.1	1.4e-86	80.84	transcription factor DIVARICATA-like [Momordica charantia]	[more]
XP_039012789.1	5.1e-12	48.35	transcription factor DIVARICATA-like [Hibiscus syriacus]	[more]
KAE8692976.1	5.1e-12	46.94	Transcription factor DIVARICATA [Hibiscus syriacus]	[more]
XP_022145143.1	2.5e-11	34.93	transcription factor SRM1-like [Momordica charantia]	[more]

BLAST of Moc05g09670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNN6	2.6e-11	52.05	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
Q2V9B0	4.4e-11	40.91	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q8S9H7	1.3e-10	43.33	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
B8A9B2	1.1e-09	46.58	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	1.1e-09	46.58	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]

BLAST of Moc05g09670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVN6	1.7e-114	100.00	uncharacterized protein LOC111014661 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1CTL3	6.7e-87	80.84	transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6A2ZN51	2.4e-12	46.94	Transcription factor DIVARICATA OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110...	[more]
A0A6J1CV56	1.2e-11	34.93	transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE...	[more]
A0A6A2YB53	1.6e-11	45.65	Transcription factor DIVARICATA OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111...	[more]

BLAST of Moc05g09670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04760.1	1.4e-12	51.35	Duplicated homeodomain-like superfamily protein	[more]
AT5G08520.1	1.9e-12	52.05	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	1.6e-11	44.44	Homeodomain-like transcriptional regulator	[more]
AT1G74840.1	2.7e-11	39.05	Homeodomain-like superfamily protein	[more]
AT1G19000.1	2.7e-11	36.89	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 95..145 e-value: 2.6E-7 score: 40.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 98..143 score: 6.35339
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 98..142 e-value: 5.53758E-9 score: 48.3406
None	No IPR available	GENE3D	1.10.10.60		coord: 97..147 e-value: 1.3E-12 score: 49.6
None	No IPR available	PANTHER	PTHR44191	TRANSCRIPTION FACTOR KUA1	coord: 93..174
None	No IPR available	PANTHER	PTHR44191:SF21	TRANSCRIPTION FACTOR SRM1	coord: 93..174
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 97..143 e-value: 5.5E-13 score: 47.0
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 98..142 e-value: 3.3E-9 score: 36.8
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 97..147 score: 12.46615
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 97..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g09670.1	Moc05g09670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding