Moc05g09620 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g09620
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	protein SPIRRIG
Location	chr5: 7461562 .. 7462233 (-)
RNA-Seq Expression	Moc05g09620
Synteny	Moc05g09620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACCAGAAAGAAGTCCACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGCTGAACTTGGACGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGCCAAACCTAGAACGTCAGGAAGGGTTGCCCGAGGCACATGCACTAACGACCCCTGAGCCACTCCAAAAGCAGTTCGCGGTTTTGGAAGATAAGGTAGAGGGCATGCTTCAACGCATGACCCAAGTCCTTCGACAATACGAGCGACAAGAGTCCGACGAAGTACCCCTTGTCAGAGACCCGAGAAAGGGGAAGGGCCCAGCGCAAAGCGAGACCGAGGAGTCAACGAACAGTGCAGGGAGCAAGTTGCGGATAGGTGGAAATACCAGGCGACGAACCCAGATTTTCGACTCCCAAAAGATGAAAAAGCAACATAAATACTCGGCACCAAATGGGGGCAGGAGCGACCATGATGACAGAAACTCCGAGCCGGTAAGTCTCGACAAAGGCAAACCAGCAGATCAGCCAGAGTCCTCGGAGAAGCGACATAACCAAAAGGAGAAGGGATTCGACCTCGAAGAACTACTGGACCAAGCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAACAACGACAGGACTTCTACTAA

mRNA sequence

ATGACACCAGAAAGAAGTCCACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGCTGAACTTGGACGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGCCAAACCTAGAACGTCAGGAAGGGTTGCCCGAGGCACATGCACTAACGACCCCTGAGCCACTCCAAAAGCAGTTCGCGGTTTTGGAAGATAAGGTAGAGGGCATGCTTCAACGCATGACCCAAGTCCTTCGACAATACGAGCGACAAGAGTCCGACGAAGTACCCCTTGTCAGAGACCCGAGAAAGGGGAAGGGCCCAGCGCAAAGCGAGACCGAGGAGTCAACGAACAGTGCAGGGAGCAAGTTGCGGATAGGTGGAAATACCAGGCGACGAACCCAGATTTTCGACTCCCAAAAGATGAAAAAGCAACATAAATACTCGGCACCAAATGGGGGCAGGAGCGACCATGATGACAGAAACTCCGAGCCGGTAAGTCTCGACAAAGGCAAACCAGCAGATCAGCCAGAGTCCTCGGAGAAGCGACATAACCAAAAGGAGAAGGGATTCGACCTCGAAGAACTACTGGACCAAGCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAACAACGACAGGACTTCTACTAA

Coding sequence (CDS)

ATGACACCAGAAAGAAGTCCACGACGCTCTGATGATAACTGCTCTGCCAAGAGGAGGCTGAACTTGGACGACCCCCAGGTTGGAGGACCCGAGGATGGGACCAGCCAGCCAAACCTAGAACGTCAGGAAGGGTTGCCCGAGGCACATGCACTAACGACCCCTGAGCCACTCCAAAAGCAGTTCGCGGTTTTGGAAGATAAGGTAGAGGGCATGCTTCAACGCATGACCCAAGTCCTTCGACAATACGAGCGACAAGAGTCCGACGAAGTACCCCTTGTCAGAGACCCGAGAAAGGGGAAGGGCCCAGCGCAAAGCGAGACCGAGGAGTCAACGAACAGTGCAGGGAGCAAGTTGCGGATAGGTGGAAATACCAGGCGACGAACCCAGATTTTCGACTCCCAAAAGATGAAAAAGCAACATAAATACTCGGCACCAAATGGGGGCAGGAGCGACCATGATGACAGAAACTCCGAGCCGGTAAGTCTCGACAAAGGCAAACCAGCAGATCAGCCAGAGTCCTCGGAGAAGCGACATAACCAAAAGGAGAAGGGATTCGACCTCGAAGAACTACTGGACCAAGCCGACTCACCATTCACGGAGGAGATCATGAGAGAGAAGGTCCCTCCAAAATTCAAGCTACCCACGGTGAAACAACGACAGGACTTCTACTAA

Protein sequence

MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQFAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRIGGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQRQDFY

Homology

[Close]

BLAST of Moc05g09620 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60
           MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120
           FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI
Sbjct: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120

Query: 121 GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ 180
           GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ
Sbjct: 121 GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ 180

Query: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQRQDFY 224
           KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQRQDFY
Sbjct: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQRQDFY 223

[Close]

BLAST of Moc05g09620 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 333.6 bits (854), Expect = 1.3e-87
Identity = 176/218 (80.73%), Postives = 187/218 (85.78%), Query Frame = 0


Query: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60
           MTPERSPRRSDD+CSAKRRLNL DPQVGGPEDGTSQPN ERQEGL E  ALTTPEP QKQ
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120
           FAVLEDK                  ESDEVPLVRDP+KGKGP +S+TEESTNS GSKLRI
Sbjct: 61  FAVLEDK------------------ESDEVPLVRDPKKGKGPTESDTEESTNSVGSKLRI 120

Query: 121 GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ 180
           GGNTR+RT+IFD +K KKQHK  APNGG+SDHDDRNSEP+SLDKGKPAD+PESSEKRH+ 
Sbjct: 121 GGNTRQRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSH 180

Query: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ 219
           KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ
Sbjct: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ 200

[Close]

BLAST of Moc05g09620 vs. NCBI nr
Match: XP_022155816.1 (protein SPIRRIG [Momordica charantia])

HSP 1 Score: 173.3 bits (438), Expect = 2.3e-39
Identity = 94/138 (68.12%), Postives = 111/138 (80.43%), Query Frame = 0


Query: 84  RQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRIGGNTRRRTQIFDS---QKMKKQH 143
           R E+ EVPL R PRKGKGP +SE+EESTNS GS+LR+  N +RRTQ FDS   QK KKQ 
Sbjct: 5   RTEAGEVPLFRGPRKGKGPIESESEESTNSVGSRLRLEENIKRRTQNFDSRGQQKDKKQQ 64

Query: 144 KYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQADSPFTE 203
           K   P+GG+S+HD +N+EP+ LDK K  D+PE SE++ ++KEKGFDLEELLDQADSPF E
Sbjct: 65  KSPVPDGGKSNHDKQNAEPIDLDKDKSTDRPELSERQQSKKEKGFDLEELLDQADSPFIE 124

Query: 204 EIMREKVPPKFKLPTVKQ 219
           EIM EKVPPKFKLPTVKQ
Sbjct: 125 EIMGEKVPPKFKLPTVKQ 142

[Close]

BLAST of Moc05g09620 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia])

HSP 1 Score: 159.5 bits (402), Expect = 3.5e-35
Identity = 80/93 (86.02%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 125 RRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQKEKG 184
           RRRT+IFDSQK+KKQHK  APNG ++DHD+RNSEP+SL+KGKP D+PESSEKRHNQKEKG
Sbjct: 12  RRRTRIFDSQKIKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQKEKG 71

Query: 185 FDLEELLDQADSPFTEEIMREKVPPKFKLPTVK 218
           FDLEELL QADSPFTEEIMREKVPPKFKLPTVK
Sbjct: 72  FDLEELLGQADSPFTEEIMREKVPPKFKLPTVK 104

[Close]

BLAST of Moc05g09620 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 122.1 bits (305), Expect = 6.1e-24
Identity = 60/69 (86.96%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 138 KQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQADSP 197
           +QHK  APNGG+SDH+DR+SEP+SLDKGKPAD+PESSEKRHNQK+KGFDLEELLDQADSP
Sbjct: 41  QQHKSPAPNGGKSDHEDRSSEPISLDKGKPADRPESSEKRHNQKKKGFDLEELLDQADSP 100

Query: 198 FTEEIMREK 207
           FTEEIMREK
Sbjct: 101 FTEEIMREK 109

[Close]

BLAST of Moc05g09620 vs. ExPASy TrEMBL
Match: A0A6J1CUA7 (uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014646 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 7.8e-118
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60
           MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ
Sbjct: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120
           FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI
Sbjct: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120

Query: 121 GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ 180
           GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ
Sbjct: 121 GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ 180

Query: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQRQDFY 224
           KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQRQDFY
Sbjct: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQRQDFY 223

[Close]

BLAST of Moc05g09620 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.5e-88
Identity = 176/218 (80.73%), Postives = 187/218 (85.78%), Query Frame = 0


Query: 1   MTPERSPRRSDDNCSAKRRLNLDDPQVGGPEDGTSQPNLERQEGLPEAHALTTPEPLQKQ 60
           MTPERSPRRSDD+CSAKRRLNL DPQVGGPEDGTSQPN ERQEGL E  ALTTPEP QKQ
Sbjct: 1   MTPERSPRRSDDDCSAKRRLNLGDPQVGGPEDGTSQPNQERQEGLXEXXALTTPEPFQKQ 60

Query: 61  FAVLEDKVEGMLQRMTQVLRQYERQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRI 120
           FAVLEDK                  ESDEVPLVRDP+KGKGP +S+TEESTNS GSKLRI
Sbjct: 61  FAVLEDK------------------ESDEVPLVRDPKKGKGPTESDTEESTNSVGSKLRI 120

Query: 121 GGNTRRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQ 180
           GGNTR+RT+IFD +K KKQHK  APNGG+SDHDDRNSEP+SLDKGKPAD+PESSEKRH+ 
Sbjct: 121 GGNTRQRTRIFDPRKTKKQHKSPAPNGGKSDHDDRNSEPISLDKGKPADRPESSEKRHSH 180

Query: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ 219
           KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ
Sbjct: 181 KEKGFDLEELLDQADSPFTEEIMREKVPPKFKLPTVKQ 200

[Close]

BLAST of Moc05g09620 vs. ExPASy TrEMBL
Match: A0A6J1DSV3 (protein SPIRRIG OS=Momordica charantia OX=3673 GN=LOC111022848 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39
Identity = 94/138 (68.12%), Postives = 111/138 (80.43%), Query Frame = 0


Query: 84  RQESDEVPLVRDPRKGKGPAQSETEESTNSAGSKLRIGGNTRRRTQIFDS---QKMKKQH 143
           R E+ EVPL R PRKGKGP +SE+EESTNS GS+LR+  N +RRTQ FDS   QK KKQ 
Sbjct: 5   RTEAGEVPLFRGPRKGKGPIESESEESTNSVGSRLRLEENIKRRTQNFDSRGQQKDKKQQ 64

Query: 144 KYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQADSPFTE 203
           K   P+GG+S+HD +N+EP+ LDK K  D+PE SE++ ++KEKGFDLEELLDQADSPF E
Sbjct: 65  KSPVPDGGKSNHDKQNAEPIDLDKDKSTDRPELSERQQSKKEKGFDLEELLDQADSPFIE 124

Query: 204 EIMREKVPPKFKLPTVKQ 219
           EIM EKVPPKFKLPTVKQ
Sbjct: 125 EIMGEKVPPKFKLPTVKQ 142

[Close]

BLAST of Moc05g09620 vs. ExPASy TrEMBL
Match: A0A6J1E1E7 (uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025548 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.7e-35
Identity = 80/93 (86.02%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 125 RRRTQIFDSQKMKKQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQKEKG 184
           RRRT+IFDSQK+KKQHK  APNG ++DHD+RNSEP+SL+KGKP D+PESSEKRHNQKEKG
Sbjct: 12  RRRTRIFDSQKIKKQHKSLAPNGSKNDHDNRNSEPISLNKGKPIDRPESSEKRHNQKEKG 71

Query: 185 FDLEELLDQADSPFTEEIMREKVPPKFKLPTVK 218
           FDLEELL QADSPFTEEIMREKVPPKFKLPTVK
Sbjct: 72  FDLEELLGQADSPFTEEIMREKVPPKFKLPTVK 104

[Close]

BLAST of Moc05g09620 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.0e-24
Identity = 60/69 (86.96%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 138 KQHKYSAPNGGRSDHDDRNSEPVSLDKGKPADQPESSEKRHNQKEKGFDLEELLDQADSP 197
           +QHK  APNGG+SDH+DR+SEP+SLDKGKPAD+PESSEKRHNQK+KGFDLEELLDQADSP
Sbjct: 41  QQHKSPAPNGGKSDHEDRSSEPISLDKGKPADRPESSEKRHNQKKKGFDLEELLDQADSP 100

Query: 198 FTEEIMREK 207
           FTEEIMREK
Sbjct: 101 FTEEIMREK 109

The following BLAST results are available for this feature:

BLAST of Moc05g09620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145129.1	1.6e-117	100.00	uncharacterized protein LOC111014646 [Momordica charantia]	[more]
XP_022158830.1	1.3e-87	80.73	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022155816.1	2.3e-39	68.12	protein SPIRRIG [Momordica charantia]	[more]
XP_022159109.1	3.5e-35	86.02	uncharacterized protein LOC111025548 [Momordica charantia]	[more]
XP_022142767.1	6.1e-24	86.96	uncharacterized protein LOC111012805 [Momordica charantia]	[more]

BLAST of Moc05g09620 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g09620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUA7	7.8e-118	100.00	uncharacterized protein LOC111014646 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6J1DWY0	6.5e-88	80.73	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DSV3	1.1e-39	68.12	protein SPIRRIG OS=Momordica charantia OX=3673 GN=LOC111022848 PE=4 SV=1	[more]
A0A6J1E1E7	1.7e-35	86.02	uncharacterized protein LOC111025548 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	3.0e-24	86.96	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of Moc05g09620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g09620.1	Moc05g09620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm