Moc05g09580 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g09580
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Myb transcription factor
Location	chr5: 7440210 .. 7441222 (+)
RNA-Seq Expression	Moc05g09580
Synteny	Moc05g09580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGGTCCCTACTTACCACTCTGATCTCTTTAAATATTATGACTGTCACTCAGAATCTGCGCTTGGATCTCCTTCGTGAGTGTAGGAAAATGGGTGAAGATTTCCCTCCCCCTCCAATGGAAAATATTTCTTTGGATGTGGAGCAGTGTGGGACAGATTTCCAGCAGCTTGATGAGTTTATGCAGCGTTCTCCTTCACCGATTTCGGCGGAATTCTTCAACTGCCGCACTCCTAATTCTCCCACGGCGTTGCAGTTGAAGTTTCAGAAGATACTCTCCGACTTCGAGGCCGCCGCCGCCATCGTGGATTCGACAGTAACAAAGCTCCCATGGTGTCCTAATTCTCCGATGACAGCGTTGCAGGATCTATTATTCTCCGACTTTGAGGCCGCCGCCGCCATGGTGGATTCGACAGTAACAAGGCTCCCATGGTGTCCTAATTCTCTGACGACGGCGTTGCAGGATCTATTATTCTCCGACTTCGAGGCCAATACAGAGACGGAGCCAACAATAACAAACTCTCTTTCCGTCGCCGTGAGTTCTGACAGCTCCGTCACAAATTTAACGGAGAGAAACTACGGCCGACGACCCCAATTACGTATTGGGCATTGGACCGAGCAGGAACAAAAGTATGCTCTGATCCTATGCTATGAATCAACCAACAATTACTCAACTCTAAAGTTTAGGCGGAAAAGTTTAAATTATATATGTTTCGAATTTCCCAATTCTGATCCTTTAAAGATTTTCCTCTCTCGTTTGGTTTTGATTATTGCAGGTCATTTTCTATGGGACTGAAGATTTATGGACCAGGGAACTGGAAACAGATTGCCGGATTGGTGGGCACAAGAACACACATCCAGGTGGGCAGCCATGCCCAAAAGTACTTCAAGCACCACGAAAACCGGAGAAATCGGAAGACTCCCACTGTTCGACCACCGCCGTCGCCGCCGCCGCAACAATTTACAATTACCAATTACTATCCTCCGCCACCTGATCACCAACGAAACTAG

mRNA sequence

ATGGGTGGGTCCCTACTTACCACTCTGATCTCTTTAAATATTATGACTGTCACTCAGAATCTGCGCTTGGATCTCCTTCGTGAGTGTAGGAAAATGGGTGAAGATTTCCCTCCCCCTCCAATGGAAAATATTTCTTTGGATGTGGAGCAGTGTGGGACAGATTTCCAGCAGCTTGATGAGTTTATGCAGCGTTCTCCTTCACCGATTTCGGCGGAATTCTTCAACTGCCGCACTCCTAATTCTCCCACGGCGTTGCAGTTGAAGTTTCAGAAGATACTCTCCGACTTCGAGGCCGCCGCCGCCATCGTGGATTCGACAGTAACAAAGCTCCCATGGTGTCCTAATTCTCCGATGACAGCGTTGCAGGATCTATTATTCTCCGACTTTGAGGCCGCCGCCGCCATGGTGGATTCGACAGTAACAAGGCTCCCATGGTGTCCTAATTCTCTGACGACGGCGTTGCAGGATCTATTATTCTCCGACTTCGAGGCCAATACAGAGACGGAGCCAACAATAACAAACTCTCTTTCCGTCGCCGTGAGTTCTGACAGCTCCGTCACAAATTTAACGGAGAGAAACTACGGCCGACGACCCCAATTACGTATTGGGCATTGGACCGAGCAGGAACAAAAGTCATTTTCTATGGGACTGAAGATTTATGGACCAGGGAACTGGAAACAGATTGCCGGATTGGTGGGCACAAGAACACACATCCAGGTGGGCAGCCATGCCCAAAAGTACTTCAAGCACCACGAAAACCGGAGAAATCGGAAGACTCCCACTGTTCGACCACCGCCGTCGCCGCCGCCGCAACAATTTACAATTACCAATTACTATCCTCCGCCACCTGATCACCAACGAAACTAG

Coding sequence (CDS)

ATGGGTGGGTCCCTACTTACCACTCTGATCTCTTTAAATATTATGACTGTCACTCAGAATCTGCGCTTGGATCTCCTTCGTGAGTGTAGGAAAATGGGTGAAGATTTCCCTCCCCCTCCAATGGAAAATATTTCTTTGGATGTGGAGCAGTGTGGGACAGATTTCCAGCAGCTTGATGAGTTTATGCAGCGTTCTCCTTCACCGATTTCGGCGGAATTCTTCAACTGCCGCACTCCTAATTCTCCCACGGCGTTGCAGTTGAAGTTTCAGAAGATACTCTCCGACTTCGAGGCCGCCGCCGCCATCGTGGATTCGACAGTAACAAAGCTCCCATGGTGTCCTAATTCTCCGATGACAGCGTTGCAGGATCTATTATTCTCCGACTTTGAGGCCGCCGCCGCCATGGTGGATTCGACAGTAACAAGGCTCCCATGGTGTCCTAATTCTCTGACGACGGCGTTGCAGGATCTATTATTCTCCGACTTCGAGGCCAATACAGAGACGGAGCCAACAATAACAAACTCTCTTTCCGTCGCCGTGAGTTCTGACAGCTCCGTCACAAATTTAACGGAGAGAAACTACGGCCGACGACCCCAATTACGTATTGGGCATTGGACCGAGCAGGAACAAAAGTCATTTTCTATGGGACTGAAGATTTATGGACCAGGGAACTGGAAACAGATTGCCGGATTGGTGGGCACAAGAACACACATCCAGGTGGGCAGCCATGCCCAAAAGTACTTCAAGCACCACGAAAACCGGAGAAATCGGAAGACTCCCACTGTTCGACCACCGCCGTCGCCGCCGCCGCAACAATTTACAATTACCAATTACTATCCTCCGCCACCTGATCACCAACGAAACTAG

Protein sequence

MGGSLLTTLISLNIMTVTQNLRLDLLRECRKMGEDFPPPPMENISLDVEQCGTDFQQLDEFMQRSPSPISAEFFNCRTPNSPTALQLKFQKILSDFEAAAAIVDSTVTKLPWCPNSPMTALQDLLFSDFEAAAAMVDSTVTRLPWCPNSLTTALQDLLFSDFEANTETEPTITNSLSVAVSSDSSVTNLTERNYGRRPQLRIGHWTEQEQKSFSMGLKIYGPGNWKQIAGLVGTRTHIQVGSHAQKYFKHHENRRNRKTPTVRPPPSPPPQQFTITNYYPPPPDHQRN

Homology

[Close]

BLAST of Moc05g09580 vs. NCBI nr
Match: XP_022145130.1 (transcription factor DIVARICATA-like [Momordica charantia])

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-11
Identity = 62/163 (38.04%), Postives = 77/163 (47.24%), Query Frame = 0


Query: 163 EANTETEPTITNSLSVAVSSDSSVTNLTERNYGRRP---QLRIGHWTEQEQKSFSMGLKI 222
           E +++ +   T + +V +S  SS  NL ER          L +  WT+ E   F MGL+ 
Sbjct: 60  ELSSDDDVAETTTTNVLLSDVSSAVNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEK 119

Query: 223 YGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKHHEN------------------------- 282
           YG GNWK+IA   V TRT  QV SHAQKY K+ +N                         
Sbjct: 120 YGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVDP 179

Query: 283 ------RRNRKTPTVRPPPSPP--PQQFTITNYYPPPPDHQRN 289
                  R R+ P    PP PP   QQFTITNYYPPP  HQ+N
Sbjct: 180 HSRVRLLRRRRAPAAIQPPLPPLQVQQFTITNYYPPP--HQQN 220

[Close]

BLAST of Moc05g09580 vs. NCBI nr
Match: XP_027343251.1 (probable basic-leucine zipper transcription factor S [Abrus precatorius])

HSP 1 Score: 72.0 bits (175), Expect = 9.4e-09
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 147 PNSLTT-ALQDLLFSDFEANTETEPTITNSLSVAVSSDSSVTNLTERNYGRRPQLRIGHW 206
           P SL T   ++ L S F + + +E  +  +++VAV+   +  N   R     P+ ++ HW
Sbjct: 8   PTSLVTERREEGLRSGFASASASETHVAVAVAVAVAEGEAHINNDSRPVPHAPKKKVSHW 67

Query: 207 TEQEQKSFSMGLKIYGPGNWKQIAGL-VGTRTHIQVGSHAQKYFKHHENRRNRKT----P 266
           TE+E + F  GLK +G G+WK I+   V ++T  QV SHAQKYF  H N++ RK+     
Sbjct: 68  TEEEHRLFLQGLKRFGKGDWKSISRYSVVSKTSAQVASHAQKYFLRHNNQKKRKSIHDIT 127

Query: 267 TVRPPPSPPPQQFTITNYYPPP 283
           T     S PP +  + + Y  P
Sbjct: 128 TDNDSISVPPSEIDLVSNYVNP 149

[Close]

BLAST of Moc05g09580 vs. NCBI nr
Match: EPS58300.1 (hypothetical protein M569_16517 [Genlisea aurea])

HSP 1 Score: 69.3 bits (168), Expect = 6.1e-08
Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 195 GRRPQLRIGHWTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKHHEN 254
           G   + ++ HWTE E + F  GL+ YG GNWK+I+   V T+TH QV SHAQKYF HH+ 
Sbjct: 54  GEVTKKKVSHWTEDEHRKFMQGLEAYGKGNWKKISNNFVITKTHTQVASHAQKYFLHHQG 113

Query: 255 RRNRKTPTVRPPPSPPPQQFTITNYYPPPP 284
             N  + + +    P     TI +   P P
Sbjct: 114 DDNNNSQSEKKRKRPSIHDTTIHDVVTPRP 143

[Close]

BLAST of Moc05g09580 vs. NCBI nr
Match: TKY45598.1 (Transcription factor DIVARICATA [Spatholobus suberectus])

HSP 1 Score: 66.2 bits (160), Expect = 5.1e-07
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 205 WTEQEQKSFSMGLKIYGPGNWKQIAGLVGTRTHIQVGSHAQKYFKHHENRRNRKTPTV 263
           WT++E + F  GL+I+G G+WK IA  V TRT  QV SHAQKYF HH + + +K  ++
Sbjct: 18  WTKEEHRLFLHGLEIFGKGDWKNIAKYVVTRTSTQVASHAQKYFLHHSSIKQKKRASI 75

[Close]

BLAST of Moc05g09580 vs. NCBI nr
Match: XP_028754750.1 (myb-like protein J [Prosopis alba])

HSP 1 Score: 66.2 bits (160), Expect = 5.1e-07
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 205 WTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKHHENRRNRK 259
           WTE+E + F +GL+ YG GNWK I+  +V TRT +Q+ SHAQK+F H  N+ N+K
Sbjct: 90  WTEEEHRLFLIGLQTYGKGNWKNISENVVKTRTPVQIASHAQKFFNHQINKGNKK 144

[Close]

BLAST of Moc05g09580 vs. ExPASy Swiss-Prot
Match: Q869R9 (Myb-like protein J OS=Dictyostelium discoideum OX=44689 GN=mybJ PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.8e-08
Identity = 34/94 (36.17%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 165 NTETEPTITNSLSVAVSSDSSVTNLTERNYGRRPQLRIGHWTEQEQKSFSMGLKIYGPGN 224
           N       T + + A ++    TN T    G++  L+ G WT++E   F  G++I+G G 
Sbjct: 344 NNNNTNNTTTTTTTATTTSGGKTNPT----GKKTSLKQG-WTKEEHIRFLNGIQIHGKGA 403

Query: 225 WKQIAGLVGTRTHIQVGSHAQKYFKHHENRRNRK 259
           WK+IA  VGTRT  Q+ SHAQKY+   +     K
Sbjct: 404 WKEIAQFVGTRTPTQIQSHAQKYYLRQKQETKNK 432

[Close]

BLAST of Moc05g09580 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.4e-07
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 205 WTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYF 249
           WTE+E K F MGLK YG G+W+ I+   V TRT  QV SHAQKYF
Sbjct: 134 WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYF 178

[Close]

BLAST of Moc05g09580 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-06
Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 181 SSDSSVTNLTERNYGRRPQLRIGHWTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQ 240
           S+D +V +  + N GR  +  +  WTE+E K F +GL+  G G+W+ I+   V TRT  Q
Sbjct: 76  SADDAVQH--QSNSGRERKRGV-PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQ 135

Query: 241 VGSHAQKYF--KHHENRRNRKT 260
           V SHAQKYF  + + NRR R++
Sbjct: 136 VASHAQKYFLRRSNLNRRRRRS 154

[Close]

BLAST of Moc05g09580 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.9e-06
Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 205 WTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKHHENRRNRK 259
           WTE+E + F +GL+  G G+W+ I+   V TRT  QV SHAQKYF    N   RK
Sbjct: 98  WTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRK 152

[Close]

BLAST of Moc05g09580 vs. ExPASy Swiss-Prot
Match: Q7XC57 (Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.0e-05
Identity = 26/55 (47.27%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 205 WTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKHHENRRNRK 259
           WTE+E + F +GL+  G G+W+ I+   V +RT  QV SHAQKYF    N   RK
Sbjct: 96  WTEEEHRRFLLGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNMTRRK 150

[Close]

BLAST of Moc05g09580 vs. ExPASy TrEMBL
Match: A0A6J1CTL3 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111014647 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.3e-11
Identity = 62/163 (38.04%), Postives = 77/163 (47.24%), Query Frame = 0


Query: 163 EANTETEPTITNSLSVAVSSDSSVTNLTERNYGRRP---QLRIGHWTEQEQKSFSMGLKI 222
           E +++ +   T + +V +S  SS  NL ER          L +  WT+ E   F MGL+ 
Sbjct: 60  ELSSDDDVAETTTTNVLLSDVSSAVNLPERPGAEEAGSGNLPVRRWTKDEHMLFLMGLEK 119

Query: 223 YGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKHHEN------------------------- 282
           YG GNWK+IA   V TRT  QV SHAQKY K+ +N                         
Sbjct: 120 YGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNINQRNGKSCRSKSSIFDITAVDP 179

Query: 283 ------RRNRKTPTVRPPPSPP--PQQFTITNYYPPPPDHQRN 289
                  R R+ P    PP PP   QQFTITNYYPPP  HQ+N
Sbjct: 180 HSRVRLLRRRRAPAAIQPPLPPLQVQQFTITNYYPPP--HQQN 220

[Close]

BLAST of Moc05g09580 vs. ExPASy TrEMBL
Match: S8BUP2 (Uncharacterized protein OS=Genlisea aurea OX=192259 GN=M569_16517 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.9e-08
Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 0


Query: 195 GRRPQLRIGHWTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKHHEN 254
           G   + ++ HWTE E + F  GL+ YG GNWK+I+   V T+TH QV SHAQKYF HH+ 
Sbjct: 54  GEVTKKKVSHWTEDEHRKFMQGLEAYGKGNWKKISNNFVITKTHTQVASHAQKYFLHHQG 113

Query: 255 RRNRKTPTVRPPPSPPPQQFTITNYYPPPP 284
             N  + + +    P     TI +   P P
Sbjct: 114 DDNNNSQSEKKRKRPSIHDTTIHDVVTPRP 143

[Close]

BLAST of Moc05g09580 vs. ExPASy TrEMBL
Match: M0ZND4 (I-box binding factor OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-07
Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 205 WTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKHHE-----NRRNRK 263
           WTE+EQ+SF  GL IYG G+W+ I+   V TRT IQV SHAQKYFK  E     NRR R 
Sbjct: 96  WTEEEQRSFLRGLDIYGKGDWRSISRHCVITRTAIQVASHAQKYFKRVEANKKGNRRARA 155

[Close]

BLAST of Moc05g09580 vs. ExPASy TrEMBL
Match: A0A1S4BXX8 (uncharacterized protein LOC107813057 OS=Nicotiana tabacum OX=4097 GN=LOC107813057 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.2e-07
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 193 NYGRRPQLRIGHWTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKH- 252
           NYGR+ +  I  WTE E + F  GL+IYG  NW +I+  L+  RTHIQ+ SHAQKYF   
Sbjct: 44  NYGRKIKKAI-PWTEDEHRLFLKGLEIYGKSNWAKISKDLLPNRTHIQIASHAQKYFMFK 103

Query: 253 -----HENRRNRKTPTV 263
                   R+NRK P++
Sbjct: 104 RLAAASNERKNRKKPSI 119

[Close]

BLAST of Moc05g09580 vs. ExPASy TrEMBL
Match: A0A1U7Y2J4 (uncharacterized protein LOC104239942 OS=Nicotiana sylvestris OX=4096 GN=LOC104239942 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.2e-07
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 193 NYGRRPQLRIGHWTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKH- 252
           NYGR+ +  I  WTE E + F  GL+IYG  NW +I+  L+  RTHIQ+ SHAQKYF   
Sbjct: 44  NYGRKIKKAI-PWTEDEHRLFLKGLEIYGKSNWAKISKDLLPNRTHIQIASHAQKYFMFK 103

Query: 253 -----HENRRNRKTPTV 263
                   R+NRK P++
Sbjct: 104 RLAAASNERKNRKKPSI 119

[Close]

BLAST of Moc05g09580 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 58.9 bits (141), Expect = 7.6e-09
Identity = 32/58 (55.17%), Postives = 37/58 (63.79%), Query Frame = 0


Query: 195 GRRPQLRIGH---WTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYF 249
           GR P+L       WTE+E K F MGLK YG G+W+ I+   V TRT  QV SHAQKYF
Sbjct: 130 GRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYF 187

[Close]

BLAST of Moc05g09580 vs. TAIR 10
Match: AT5G01200.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-08
Identity = 28/45 (62.22%), Postives = 30/45 (66.67%), Query Frame = 0


Query: 205 WTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYF 249
           WTE E   F MGLK YG G+W+ IA   V TRT  QV SHAQKYF
Sbjct: 148 WTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYF 192

[Close]

BLAST of Moc05g09580 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-08
Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 174 NSLSVAVSSDSSVTNLTERNYGRRPQLRIGHWTEQEQKSFSMGLKIYGPGNWKQIA-GLV 233
           +S + A   DS+        +G   + R   WTE E K F +GLK YG G+W+ I+  +V
Sbjct: 70  DSAAAAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVV 129

Query: 234 GTRTHIQVGSHAQKYF-KHHENRRNRKTPTV 263
            TRT  QV SHAQKYF + +  ++ RK  ++
Sbjct: 130 VTRTPTQVASHAQKYFLRQNSVKKERKRSSI 160

[Close]

BLAST of Moc05g09580 vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 5.0e-08
Identity = 36/72 (50.00%), Postives = 41/72 (56.94%), Query Frame = 0


Query: 205 WTEQEQKSFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYFKHHEN-----RRN-- 264
           WTE+E + F MGLK YG G+W+ IA   V TRT  QV SHAQKYF    N     RR+  
Sbjct: 143 WTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDKRRSSI 202

Query: 265 RKTPTVRPPPSP 269
               TV  P SP
Sbjct: 203 HDITTVNIPDSP 214

[Close]

BLAST of Moc05g09580 vs. TAIR 10
Match: AT1G74840.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.5e-07
Identity = 40/111 (36.04%), Postives = 56/111 (50.45%), Query Frame = 0


Query: 160 SDFEANTET--------EPTITNSLSVAVSSDSSVTNLTERNYGRRPQLRIGHWTEQEQK 219
           SD+E   ET        +    N      +S      ++  N G+  + R   WTE+E K
Sbjct: 46  SDYEQTAETPKIDGEDRDEQDMNKTPAGYASADEALPMSSSN-GKIERKRGVPWTEEEHK 105

Query: 220 SFSMGLKIYGPGNWKQIA-GLVGTRTHIQVGSHAQKYF--KHHENRRNRKT 260
            F +GL+  G G+WK I+   V TRT  QV SHAQKYF  + + NRR R++
Sbjct: 106 LFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRS 155

The following BLAST results are available for this feature:

BLAST of Moc05g09580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145130.1	2.6e-11	38.04	transcription factor DIVARICATA-like [Momordica charantia]	[more]
XP_027343251.1	9.4e-09	34.51	probable basic-leucine zipper transcription factor S [Abrus precatorius]	[more]
EPS58300.1	6.1e-08	41.11	hypothetical protein M569_16517 [Genlisea aurea]	[more]
TKY45598.1	5.1e-07	50.00	Transcription factor DIVARICATA [Spatholobus suberectus]	[more]
XP_028754750.1	5.1e-07	52.73	myb-like protein J [Prosopis alba]	[more]

BLAST of Moc05g09580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q869R9	4.8e-08	36.17	Myb-like protein J OS=Dictyostelium discoideum OX=44689 GN=mybJ PE=3 SV=1	[more]
Q8S9H7	2.4e-07	62.22	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q2V9B0	2.6e-06	42.68	Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9LVS0	5.9e-06	49.09	Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1	[more]
Q7XC57	1.0e-05	47.27	Transcription factor MYBS3 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS3 PE=...	[more]

BLAST of Moc05g09580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTL3	1.3e-11	38.04	transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
S8BUP2	2.9e-08	41.11	Uncharacterized protein OS=Genlisea aurea OX=192259 GN=M569_16517 PE=4 SV=1	[more]
M0ZND4	2.5e-07	57.81	I-box binding factor OS=Solanum tuberosum OX=4113 PE=4 SV=1	[more]
A0A1S4BXX8	4.2e-07	46.75	uncharacterized protein LOC107813057 OS=Nicotiana tabacum OX=4097 GN=LOC10781305...	[more]
A0A1U7Y2J4	4.2e-07	46.75	uncharacterized protein LOC104239942 OS=Nicotiana sylvestris OX=4096 GN=LOC10423...	[more]

BLAST of Moc05g09580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58900.1	7.6e-09	55.17	Homeodomain-like transcriptional regulator	[more]
AT5G01200.1	3.8e-08	62.22	Duplicated homeodomain-like superfamily protein	[more]
AT5G04760.1	3.8e-08	38.46	Duplicated homeodomain-like superfamily protein	[more]
AT2G38090.1	5.0e-08	50.00	Duplicated homeodomain-like superfamily protein	[more]
AT1G74840.1	2.5e-07	36.04	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 201..250 e-value: 2.8E-6 score: 36.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 197..248 score: 7.119809
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 205..248 e-value: 6.10268E-8 score: 46.4146
None	No IPR available	GENE3D	1.10.10.60		coord: 204..252 e-value: 4.9E-13 score: 51.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..288
None	No IPR available	PANTHER	PTHR44191	TRANSCRIPTION FACTOR KUA1	coord: 191..258
None	No IPR available	PANTHER	PTHR44191:SF21	TRANSCRIPTION FACTOR SRM1	coord: 191..258
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 203..247 e-value: 3.3E-9 score: 36.8
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 197..252 score: 16.948044
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 204..250 e-value: 9.6E-10 score: 36.6
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 203..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g09580.1	Moc05g09580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding