Moc05g09560 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g09560
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptiontranscription factor DIVARICATA-like
Locationchr5: 7421322 .. 7422478 (-)
RNA-Seq ExpressionMoc05g09560
SyntenyMoc05g09560
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGTCAGTGTGCGTCGGCCGCCGCCATAGTCACAGATGACCACGACCTCCAGCGTCAGATCCTGCAGTGCCCTTCTCCGGCACCGATTAACACGGACTTCATCAAATTCGAAGGTCCTAATTCTCCCACGTGGCTGCACGAGATACTCTCCGACGACGGCGCGTACGCGACACTGGACCCCTTAGTAACAAGCCCCCAGTATGCTTGTTTGATTCCCGACGGTGCGCGATATCAGTGTGCGACGGTGGGCGCCGCCACAGTCATCCAGCTTCCTCCTTTTCCGTCCAAAAGCTGGGATTCTATTGGTGGCTTCGATGTCGGGACTGAGACAGCGACAGATGGAATGCATTTTTCTCCTCTTCCGACGGACTTCTTCGACTTCGACAATCCGCCGGAGATATCCCAGCTGGACGACCCGCAGCATACCGGTTTGCTTTCTGATGTCGTCAATTTTGACTCGGCGCTGGATTTCCCGGGCAGACCAGAAGCTGAGCCCCGACCGGAACCCGAACCCGAACCCGAACCCAATTTGGCAGAGGGGAAGAGGAAGAAGAAGCTTAGATTTTGGACCAAGAATGAACACATGTACATATTCACAAGTCAAATCTATTGACTTGGTCTTTTTTTCTTTTACTTTTTTTTGTTATTTTATTCAAATGATTCTTTATTGCTTTCCTCCGCGCAGTACCCCTACATTCCCTGATGCAAAATTATATCTTGAATTTCGAGATTTTTCATTTTGATTCAACGAAAAAAATAGGCTTTAATTTGTTTTCTGTTTTCGCATGTGTATTTTGGTAGTATTTATATTATATTTTAAGAAAATGTAGGTTATTTGTGATCGGGATTCAGATGTATGGAAAAGGAAATTGGAAAGATATTGCAACAAAATTGGTGATCACAAAAACTTCCACACAGGTGGCAAGCCATGCCCAAAAGTACTATGACTATCACCAAAACCCTAACCCTAATTTAAGACAGAAAAATGGAAAGAGTGGCAGGGCCAAGTCCAGTATTTTCGACATCACCACCGTAGATCCCCACTCCAAGGCGCGCTTGCTTCACGGTCATGCGCCCATTGTTCAACCACCTTCGCCGCCTCAACAATTTACCATTACCAATTACTATCCTCCACCTCACCAACCAAGCTAG

mRNA sequence

ATGGACGGTCAGTGTGCGTCGGCCGCCGCCATAGTCACAGATGACCACGACCTCCAGCGTCAGATCCTGCAGTGCCCTTCTCCGGCACCGATTAACACGGACTTCATCAAATTCGAAGGTCCTAATTCTCCCACGTGGCTGCACGAGATACTCTCCGACGACGGCGCGTACGCGACACTGGACCCCTTAGTAACAAGCCCCCAGTATGCTTGTTTGATTCCCGACGGTGCGCGATATCAGTGTGCGACGGTGGGCGCCGCCACAGTCATCCAGCTTCCTCCTTTTCCGTCCAAAAGCTGGGATTCTATTGGTGGCTTCGATGTCGGGACTGAGACAGCGACAGATGGAATGCATTTTTCTCCTCTTCCGACGGACTTCTTCGACTTCGACAATCCGCCGGAGATATCCCAGCTGGACGACCCGCAGCATACCGGTTTGCTTTCTGATGTCGTCAATTTTGACTCGGCGCTGGATTTCCCGGGCAGACCAGAAGCTGAGCCCCGACCGGAACCCGAACCCGAACCCGAACCCAATTTGGCAGAGGGGAAGAGGAAGAAGAAGCTTAGATTTTGGACCAAGAATGAACACATGTTATTTGTGATCGGGATTCAGATGTATGGAAAAGGAAATTGGAAAGATATTGCAACAAAATTGGTGATCACAAAAACTTCCACACAGGTGGCAAGCCATGCCCAAAAGTACTATGACTATCACCAAAACCCTAACCCTAATTTAAGACAGAAAAATGGAAAGAGTGGCAGGGCCAAGTCCAGTATTTTCGACATCACCACCGTAGATCCCCACTCCAAGGCGCGCTTGCTTCACGGTCATGCGCCCATTGTTCAACCACCTTCGCCGCCTCAACAATTTACCATTACCAATTACTATCCTCCACCTCACCAACCAAGCTAG

Coding sequence (CDS)

ATGGACGGTCAGTGTGCGTCGGCCGCCGCCATAGTCACAGATGACCACGACCTCCAGCGTCAGATCCTGCAGTGCCCTTCTCCGGCACCGATTAACACGGACTTCATCAAATTCGAAGGTCCTAATTCTCCCACGTGGCTGCACGAGATACTCTCCGACGACGGCGCGTACGCGACACTGGACCCCTTAGTAACAAGCCCCCAGTATGCTTGTTTGATTCCCGACGGTGCGCGATATCAGTGTGCGACGGTGGGCGCCGCCACAGTCATCCAGCTTCCTCCTTTTCCGTCCAAAAGCTGGGATTCTATTGGTGGCTTCGATGTCGGGACTGAGACAGCGACAGATGGAATGCATTTTTCTCCTCTTCCGACGGACTTCTTCGACTTCGACAATCCGCCGGAGATATCCCAGCTGGACGACCCGCAGCATACCGGTTTGCTTTCTGATGTCGTCAATTTTGACTCGGCGCTGGATTTCCCGGGCAGACCAGAAGCTGAGCCCCGACCGGAACCCGAACCCGAACCCGAACCCAATTTGGCAGAGGGGAAGAGGAAGAAGAAGCTTAGATTTTGGACCAAGAATGAACACATGTTATTTGTGATCGGGATTCAGATGTATGGAAAAGGAAATTGGAAAGATATTGCAACAAAATTGGTGATCACAAAAACTTCCACACAGGTGGCAAGCCATGCCCAAAAGTACTATGACTATCACCAAAACCCTAACCCTAATTTAAGACAGAAAAATGGAAAGAGTGGCAGGGCCAAGTCCAGTATTTTCGACATCACCACCGTAGATCCCCACTCCAAGGCGCGCTTGCTTCACGGTCATGCGCCCATTGTTCAACCACCTTCGCCGCCTCAACAATTTACCATTACCAATTACTATCCTCCACCTCACCAACCAAGCTAG

Protein sequence

MDGQCASAAAIVTDDHDLQRQILQCPSPAPINTDFIKFEGPNSPTWLHEILSDDGAYATLDPLVTSPQYACLIPDGARYQCATVGAATVIQLPPFPSKSWDSIGGFDVGTETATDGMHFSPLPTDFFDFDNPPEISQLDDPQHTGLLSDVVNFDSALDFPGRPEAEPRPEPEPEPEPNLAEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIVQPPSPPQQFTITNYYPPPHQPS
Homology
BLAST of Moc05g09560 vs. NCBI nr
Match: XP_022145130.1 (transcription factor DIVARICATA-like [Momordica charantia])

HSP 1 Score: 170.2 bits (430), Expect = 2.7e-38
Identity = 116/234 (49.57%), Postives = 136/234 (58.12%), Query Frame = 0

Query: 91  QLPPFPS-KSWDSIGGFDVGTETATDGMHFSP-------LPTDFFDFDNPP------EIS 150
           QLPP  S   WD I GF   T         +P        P +  + DN P      E+S
Sbjct: 4   QLPPLLSLDDWD-IDGFYNETMPLPSAPAPAPEVRQEMQFPVELVNSDNNPSPMVLLELS 63

Query: 151 QLDDPQHTG----LLSDVVNFDSALDFPGRPEAEPRPEPEPEPEPNLAEGKRKKKLRFWT 210
             DD   T     LLSDV    SA++ P RP AE               G     +R WT
Sbjct: 64  SDDDVAETTTTNVLLSDV---SSAVNLPERPGAE-------------EAGSGNLPVRRWT 123

Query: 211 KNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKS 270
           K+EHMLF++G++ YG GNWK+IAT+ V+T+TSTQVASHAQKY  Y QNPN N  Q+NGKS
Sbjct: 124 KDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNIN--QRNGKS 183

Query: 271 GRAKSSIFDITTVDPHSKARLL-HGHAP-IVQPPSPP---QQFTITNYYPPPHQ 302
            R+KSSIFDIT VDPHS+ RLL    AP  +QPP PP   QQFTITNYYPPPHQ
Sbjct: 184 CRSKSSIFDITAVDPHSRVRLLRRRRAPAAIQPPLPPLQVQQFTITNYYPPPHQ 218

BLAST of Moc05g09560 vs. NCBI nr
Match: XP_022145147.1 (uncharacterized protein LOC111014661 [Momordica charantia])

HSP 1 Score: 140.2 bits (352), Expect = 2.9e-29
Identity = 84/165 (50.91%), Postives = 107/165 (64.85%), Query Frame = 0

Query: 139 DDPQHTGLLSDVVN-FDSALDFPGRPEAEPRPEPEPEPEPNLAEGKRKKKLRFWTKNEHM 198
           DD   T + S +++  +SA++ P RP AE               G     +R WTK+EHM
Sbjct: 131 DDAAETTITSVLLSAVNSAVNLPDRPGAE-------------EAGSGNLPVRRWTKDEHM 190

Query: 199 LFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKS 258
           LF++G + YGKGNWK+I+TK+ +TKTSTQV SHAQKY+ Y+QNPN   +Q+NGKS  +KS
Sbjct: 191 LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNS--KQRNGKSCISKS 250

Query: 259 SIFDITTVDPHSKARLLHGH-AP-IVQPP---SPPQQFTITNYYP 298
           SIF IT VDPHS A LL    AP  +QPP      QQFTITNY+P
Sbjct: 251 SIFGITAVDPHSMACLLRRRVAPAAIQPPLTLPQIQQFTITNYFP 280

BLAST of Moc05g09560 vs. NCBI nr
Match: XP_022133209.1 (transcription factor DIVARICATA-like [Momordica charantia])

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-20
Identity = 87/273 (31.87%), Postives = 126/273 (46.15%), Query Frame = 0

Query: 39  EGPNSPTWLHEILSDDGAYATLDPLVTSPQYACLIPDGARYQCATVGAATVIQLPPFPSK 98
           EGP SP++    +SDD           SP+ A   P         +    ++ +P     
Sbjct: 2   EGPPSPSFR---VSDD---------YWSPKTAPSSPAPWTRHQDKIFEHALVMVPENSPN 61

Query: 99  SWDSIGGFDVGTETATDGMHFSPLPTDFFDFDNPPEISQLDDPQHTGLLSDVVNFDSALD 158
            W  I G   G   A    H+  L +D  D D+     +++ P +          DS   
Sbjct: 62  RWLRIAGLIPGKSPAEVSYHYDALVSDLLDIDS----GRVELPSY-------AEDDSVAS 121

Query: 159 FPGRPEAEPRPEPEPEPEPNLAEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKL 218
            P   EA P P    +P  +      +KK + WTK EH LF++G++ +GKG+W+ I+  +
Sbjct: 122 LP-ETEAPP-PNLSEKPSKSRPNETERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNV 181

Query: 219 VITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHA 278
           VI++T TQVASHAQKY+         LRQ++ K  R +SSI DITTV+    A     H 
Sbjct: 182 VISRTPTQVASHAQKYF---------LRQESAKKDRKRSSIHDITTVEGSLVAAAATDHC 240

Query: 279 ------PIVQPPSP----PQQFTITNYYPPPHQ 302
                  I+QPP P    P QF   +Y+PP H+
Sbjct: 242 QLSTVPTIIQPPPPWPLLPHQFASASYFPPDHR 240

BLAST of Moc05g09560 vs. NCBI nr
Match: XP_022145143.1 (transcription factor SRM1-like [Momordica charantia])

HSP 1 Score: 102.1 bits (253), Expect = 8.9e-18
Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 0

Query: 155 SALDFPGRPEAEPRPEPEPEPEPNLAEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDI 214
           SALD P  P ++  P P PE         +K+K+  WTK+EH LF+IG+Q+YGKG+WK I
Sbjct: 58  SALD-PTTPVSDLGPSPSPE---------KKRKVTCWTKDEHKLFLIGLQIYGKGHWKSI 117

Query: 215 ATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLL 274
           AT++ +TKT+ QVASHAQK+Y          R+ + +  R +SSI DITTVD  + +R L
Sbjct: 118 ATEVAVTKTAAQVASHAQKFYS---------RKLSSEQSRKRSSINDITTVDVETMSRFL 164

Query: 275 HGHAPI 281
            G   +
Sbjct: 178 AGRPAV 164

BLAST of Moc05g09560 vs. NCBI nr
Match: XP_023003417.1 (transcription factor DIVARICATA-like [Cucurbita maxima])

HSP 1 Score: 98.6 bits (244), Expect = 9.8e-17
Identity = 66/169 (39.05%), Postives = 94/169 (55.62%), Query Frame = 0

Query: 143 HTGLLSDVVNFDSA-LDFPGRPEAEPRPEPEPEPEPNLAE-GKRKKKLRFWTKNEHMLFV 202
           +  L+SDV N DS  ++ P   +      PE E    L E    +KK + WTK EH LF+
Sbjct: 69  YDALVSDVQNIDSGRVELPNYADESLLSSPERESPGQLPEKASERKKGKPWTKKEHQLFL 128

Query: 203 IGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIF 262
           +G++ +GKG+W+ I+  +VIT+T TQVASHAQKY+         LRQ++ K  R +SSI 
Sbjct: 129 LGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYF---------LRQESAKKDRKRSSIH 188

Query: 263 DITTVDPH---SKARLLHG--------HAPIVQPPSP-PQQFTITNYYP 298
           DITTV+ +   + A    G        H+P    P P P QF+  +Y+P
Sbjct: 189 DITTVECNLVTAVAATSEGQLSIFSLTHSPSPSFPLPLPHQFSPASYFP 228

BLAST of Moc05g09560 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.8e-13
Identity = 52/131 (39.69%), Postives = 76/131 (58.02%), Query Frame = 0

Query: 180 AEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQ 239
           +E +RKK +  WT+ EH LF++G++ YGKG+W++I+   VIT+T TQVASHAQKY+    
Sbjct: 124 SEQERKKGVP-WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYF---- 183

Query: 240 NPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPI---VQPPSPP------QQF 299
                +RQ +G   + ++SI DITTV+      L     P     +PPS P      QQ 
Sbjct: 184 -----IRQLSGGKDKRRASIHDITTVN------LSDNQTPSPDNKKPPSSPDHSMAQQQT 238

Query: 300 TITNYYPPPHQ 302
           + T+ +  P Q
Sbjct: 244 SSTSIHKLPFQ 238

BLAST of Moc05g09560 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.2e-13
Identity = 49/120 (40.83%), Postives = 68/120 (56.67%), Query Frame = 0

Query: 182 GKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNP 241
           G+ +K+   WT+ EH LF++G+Q  GKG+W+ I+   V T+T TQVASHAQKY+      
Sbjct: 88  GRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF------ 147

Query: 242 NPNLRQKNGKSGRAKSSIFDITT----VDPHSKARLLHGHAPIVQPPSPPQQFTITNYYP 298
              LR+ N    R +SS+FDITT    V P  +        P+V P + P   T TN +P
Sbjct: 148 ---LRRSNLNRRRRRSSLFDITTDSVSVMPIEEVENKQ-EIPVVAPATLPT--TKTNAFP 195

BLAST of Moc05g09560 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.0e-12
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 0

Query: 180 AEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQ 239
           AE +R+K +  WT+ EH LF++G+  +GKG+W+ I+   VI++T TQVASHAQKY+    
Sbjct: 134 AEQERRKGIP-WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF---- 193

Query: 240 NPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPI 281
                +R  +    R +SSI DIT+V    +     G API
Sbjct: 194 -----IRLNSMNRDRRRSSIHDITSVTAGDQVAAQQG-API 223

BLAST of Moc05g09560 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.0e-12
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 0

Query: 180 AEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQ 239
           AE +R+K +  WT+ EH LF++G+  +GKG+W+ I+   VI++T TQVASHAQKY+    
Sbjct: 134 AEQERRKGIP-WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF---- 193

Query: 240 NPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPI 281
                +R  +    R +SSI DIT+V    +     G API
Sbjct: 194 -----IRLNSMNRDRRRSSIHDITSVTAGDQVAAQQG-API 223

BLAST of Moc05g09560 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.0e-12
Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 0

Query: 183 KRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPN 242
           + ++K   WT++EH LF++G+  YGKG+W+ I+   V+T+T TQVASHAQKY+       
Sbjct: 112 QERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYF------- 171

Query: 243 PNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIVQPPSP 287
             +R  +    R +SSI DIT+V          G+A +  P  P
Sbjct: 172 --IRLNSMNKDRRRSSIHDITSV----------GNADVSTPQGP 196

BLAST of Moc05g09560 vs. ExPASy TrEMBL
Match: A0A6J1CTL3 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111014647 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-38
Identity = 116/234 (49.57%), Postives = 136/234 (58.12%), Query Frame = 0

Query: 91  QLPPFPS-KSWDSIGGFDVGTETATDGMHFSP-------LPTDFFDFDNPP------EIS 150
           QLPP  S   WD I GF   T         +P        P +  + DN P      E+S
Sbjct: 4   QLPPLLSLDDWD-IDGFYNETMPLPSAPAPAPEVRQEMQFPVELVNSDNNPSPMVLLELS 63

Query: 151 QLDDPQHTG----LLSDVVNFDSALDFPGRPEAEPRPEPEPEPEPNLAEGKRKKKLRFWT 210
             DD   T     LLSDV    SA++ P RP AE               G     +R WT
Sbjct: 64  SDDDVAETTTTNVLLSDV---SSAVNLPERPGAE-------------EAGSGNLPVRRWT 123

Query: 211 KNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKS 270
           K+EHMLF++G++ YG GNWK+IAT+ V+T+TSTQVASHAQKY  Y QNPN N  Q+NGKS
Sbjct: 124 KDEHMLFLMGLEKYGNGNWKEIATEFVVTRTSTQVASHAQKYCKYRQNPNIN--QRNGKS 183

Query: 271 GRAKSSIFDITTVDPHSKARLL-HGHAP-IVQPPSPP---QQFTITNYYPPPHQ 302
            R+KSSIFDIT VDPHS+ RLL    AP  +QPP PP   QQFTITNYYPPPHQ
Sbjct: 184 CRSKSSIFDITAVDPHSRVRLLRRRRAPAAIQPPLPPLQVQQFTITNYYPPPHQ 218

BLAST of Moc05g09560 vs. ExPASy TrEMBL
Match: A0A6J1CVN6 (uncharacterized protein LOC111014661 OS=Momordica charantia OX=3673 GN=LOC111014661 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 84/165 (50.91%), Postives = 107/165 (64.85%), Query Frame = 0

Query: 139 DDPQHTGLLSDVVN-FDSALDFPGRPEAEPRPEPEPEPEPNLAEGKRKKKLRFWTKNEHM 198
           DD   T + S +++  +SA++ P RP AE               G     +R WTK+EHM
Sbjct: 131 DDAAETTITSVLLSAVNSAVNLPDRPGAE-------------EAGSGNLPVRRWTKDEHM 190

Query: 199 LFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKS 258
           LF++G + YGKGNWK+I+TK+ +TKTSTQV SHAQKY+ Y+QNPN   +Q+NGKS  +KS
Sbjct: 191 LFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNS--KQRNGKSCISKS 250

Query: 259 SIFDITTVDPHSKARLLHGH-AP-IVQPP---SPPQQFTITNYYP 298
           SIF IT VDPHS A LL    AP  +QPP      QQFTITNY+P
Sbjct: 251 SIFGITAVDPHSMACLLRRRVAPAAIQPPLTLPQIQQFTITNYFP 280

BLAST of Moc05g09560 vs. ExPASy TrEMBL
Match: A0A6J1BVC4 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111005863 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-20
Identity = 87/273 (31.87%), Postives = 126/273 (46.15%), Query Frame = 0

Query: 39  EGPNSPTWLHEILSDDGAYATLDPLVTSPQYACLIPDGARYQCATVGAATVIQLPPFPSK 98
           EGP SP++    +SDD           SP+ A   P         +    ++ +P     
Sbjct: 2   EGPPSPSFR---VSDD---------YWSPKTAPSSPAPWTRHQDKIFEHALVMVPENSPN 61

Query: 99  SWDSIGGFDVGTETATDGMHFSPLPTDFFDFDNPPEISQLDDPQHTGLLSDVVNFDSALD 158
            W  I G   G   A    H+  L +D  D D+     +++ P +          DS   
Sbjct: 62  RWLRIAGLIPGKSPAEVSYHYDALVSDLLDIDS----GRVELPSY-------AEDDSVAS 121

Query: 159 FPGRPEAEPRPEPEPEPEPNLAEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKL 218
            P   EA P P    +P  +      +KK + WTK EH LF++G++ +GKG+W+ I+  +
Sbjct: 122 LP-ETEAPP-PNLSEKPSKSRPNETERKKGKPWTKKEHQLFLLGLKKFGKGDWRSISRNV 181

Query: 219 VITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHA 278
           VI++T TQVASHAQKY+         LRQ++ K  R +SSI DITTV+    A     H 
Sbjct: 182 VISRTPTQVASHAQKYF---------LRQESAKKDRKRSSIHDITTVEGSLVAAAATDHC 240

Query: 279 ------PIVQPPSP----PQQFTITNYYPPPHQ 302
                  I+QPP P    P QF   +Y+PP H+
Sbjct: 242 QLSTVPTIIQPPPPWPLLPHQFASASYFPPDHR 240

BLAST of Moc05g09560 vs. ExPASy TrEMBL
Match: A0A6J1CV56 (transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-18
Identity = 57/126 (45.24%), Postives = 79/126 (62.70%), Query Frame = 0

Query: 155 SALDFPGRPEAEPRPEPEPEPEPNLAEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDI 214
           SALD P  P ++  P P PE         +K+K+  WTK+EH LF+IG+Q+YGKG+WK I
Sbjct: 58  SALD-PTTPVSDLGPSPSPE---------KKRKVTCWTKDEHKLFLIGLQIYGKGHWKSI 117

Query: 215 ATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLL 274
           AT++ +TKT+ QVASHAQK+Y          R+ + +  R +SSI DITTVD  + +R L
Sbjct: 118 ATEVAVTKTAAQVASHAQKFYS---------RKLSSEQSRKRSSINDITTVDVETMSRFL 164

Query: 275 HGHAPI 281
            G   +
Sbjct: 178 AGRPAV 164

BLAST of Moc05g09560 vs. ExPASy TrEMBL
Match: A0A6J1KMG9 (transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.8e-17
Identity = 66/169 (39.05%), Postives = 94/169 (55.62%), Query Frame = 0

Query: 143 HTGLLSDVVNFDSA-LDFPGRPEAEPRPEPEPEPEPNLAE-GKRKKKLRFWTKNEHMLFV 202
           +  L+SDV N DS  ++ P   +      PE E    L E    +KK + WTK EH LF+
Sbjct: 69  YDALVSDVQNIDSGRVELPNYADESLLSSPERESPGQLPEKASERKKGKPWTKKEHQLFL 128

Query: 203 IGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIF 262
           +G++ +GKG+W+ I+  +VIT+T TQVASHAQKY+         LRQ++ K  R +SSI 
Sbjct: 129 LGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYF---------LRQESAKKDRKRSSIH 188

Query: 263 DITTVDPH---SKARLLHG--------HAPIVQPPSP-PQQFTITNYYP 298
           DITTV+ +   + A    G        H+P    P P P QF+  +Y+P
Sbjct: 189 DITTVECNLVTAVAATSEGQLSIFSLTHSPSPSFPLPLPHQFSPASYFP 228

BLAST of Moc05g09560 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-17
Identity = 52/113 (46.02%), Postives = 67/113 (59.29%), Query Frame = 0

Query: 181 EGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQN 240
           E +RK+    WT+NEH LF+IG++ YGKG+W+ I+  +V+T+T TQVASHAQKY+     
Sbjct: 92  ESERKRGTP-WTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYF----- 151

Query: 241 PNPNLRQKNGKSGRAKSSIFDITTVD-----PHSKARLLHGHAPIVQPPSPPQ 289
               LRQ + K  R +SSI DITTVD     P S       H   VQ P   Q
Sbjct: 152 ----LRQNSVKKERKRSSIHDITTVDATLAMPGSNMDWTGQHGSPVQAPQQQQ 194

BLAST of Moc05g09560 vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-16
Identity = 50/109 (45.87%), Postives = 67/109 (61.47%), Query Frame = 0

Query: 180 AEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQ 239
           AE +RKK +  WT+ EH  F++G++ YGKG+W++IA   V T+T TQVASHAQKY+    
Sbjct: 133 AEHERKKGVP-WTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYF---- 192

Query: 240 NPNPNLRQKNGKSGRAKSSIFDITTVD-PHSKARLLHGHAPIVQPPSPP 288
                +RQ NG   + +SSI DITTV+ P S       +A    P SPP
Sbjct: 193 -----IRQVNGGKDKRRSSIHDITTVNIPDSPDAAAADNATANAPCSPP 231

BLAST of Moc05g09560 vs. TAIR 10
Match: AT5G01200.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 8.9e-16
Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 0

Query: 183 KRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQNPN 242
           K +KK   WT++EH+ F++G++ YGKG+W++IA   V T+T TQVASHAQKY+       
Sbjct: 140 KERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYF------- 199

Query: 243 PNLRQKNGKSGRAKSSIFDITTVD-PHSKARLLHGHAPIVQPPSPPQQFTITNYYPPPH 301
             LRQ      + +SSI DITTV+ P + A      A +   P+P   F +    P PH
Sbjct: 200 --LRQLTDGKDKRRSSIHDITTVNIPDADASATATTADVALSPTPANSFDVF-LQPNPH 248

BLAST of Moc05g09560 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 79.3 bits (194), Expect = 5.7e-15
Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 0

Query: 160 PGRPEAEPRPEPEPEPEPNLAEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLV 219
           PG      R +    PE        +KK   WT+ EH LF++G++ YGKG+W++I+   V
Sbjct: 118 PGHQVCNKRSQAGRSPE------LERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFV 177

Query: 220 ITKTSTQVASHAQKYYDYHQNPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAP 279
           IT+T TQVASHAQKY+         +RQ +G   + ++SI DITTV+   +A L    + 
Sbjct: 178 ITRTPTQVASHAQKYF---------IRQLSGGKDKRRASIHDITTVNLEEEASLETNKSS 224

Query: 280 IV 282
           IV
Sbjct: 238 IV 224

BLAST of Moc05g09560 vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-14
Identity = 48/123 (39.02%), Postives = 67/123 (54.47%), Query Frame = 0

Query: 180 AEGKRKKKLRFWTKNEHMLFVIGIQMYGKGNWKDIATKLVITKTSTQVASHAQKYYDYHQ 239
           AE +R+K +  WT+ EH LF++G+  +GKG+W+ I+   VI++T TQVASHAQKY+    
Sbjct: 126 AEQERRKGIP-WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF---- 185

Query: 240 NPNPNLRQKNGKSGRAKSSIFDITTVDPHSKARLLHGHAPIVQPPSPPQQFTITNYYPPP 299
                +R  +    R +SSI DITTV+  + A    G  P V    P Q        P  
Sbjct: 186 -----IRLNSMNRDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAQPQPQPQPQPQQ 238

Query: 300 HQP 303
           H P
Sbjct: 246 HHP 238

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145130.12.7e-3849.57transcription factor DIVARICATA-like [Momordica charantia][more]
XP_022145147.12.9e-2950.91uncharacterized protein LOC111014661 [Momordica charantia][more]
XP_022133209.12.5e-2031.87transcription factor DIVARICATA-like [Momordica charantia][more]
XP_022145143.18.9e-1845.24transcription factor SRM1-like [Momordica charantia][more]
XP_023003417.19.8e-1739.05transcription factor DIVARICATA-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q8S9H71.8e-1339.69Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ... [more]
Q2V9B05.2e-1340.83Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1[more]
B8A9B22.0e-1241.58Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ... [more]
Q8LH592.0e-1241.58Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=... [more]
Q9FNN62.0e-1238.46Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1CTL31.3e-3849.57transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1CVN61.4e-2950.91uncharacterized protein LOC111014661 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1BVC41.2e-2031.87transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1CV564.3e-1845.24transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE... [more]
A0A6J1KMG94.8e-1739.05transcription factor DIVARICATA-like OS=Cucurbita maxima OX=3661 GN=LOC111497033... [more]
Match NameE-valueIdentityDescription
AT5G04760.12.1e-1746.02Duplicated homeodomain-like superfamily protein [more]
AT2G38090.11.8e-1645.87Duplicated homeodomain-like superfamily protein [more]
AT5G01200.18.9e-1641.18Duplicated homeodomain-like superfamily protein [more]
AT5G58900.15.7e-1539.34Homeodomain-like transcriptional regulator [more]
AT1G49010.12.9e-1439.02Duplicated homeodomain-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 187..237
e-value: 1.7E-5
score: 34.2
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 183..235
score: 6.608863
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 191..234
e-value: 7.90841E-7
score: 43.333
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 191..234
e-value: 1.4E-8
score: 34.8
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 183..239
score: 14.878835
NoneNo IPR availableGENE3D1.10.10.60coord: 189..240
e-value: 1.5E-12
score: 49.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..185
NoneNo IPR availablePANTHERPTHR44042:SF15SYRINGOLIDE-INDUCED PROTEIN 1-3-1Bcoord: 145..273
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 187..236
e-value: 1.2E-12
score: 45.9
IPR043363Transcription factor DIVARICATA-likePANTHERPTHR44042DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 145..273
IPR017884SANT domainPROSITEPS51293SANTcoord: 191..242
score: 9.062263
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 185..239

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g09560.1Moc05g09560.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding