Moc05g09550 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g09550
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Transcription factor DIVARICATA
Location	chr5: 7411697 .. 7413133 (+)
RNA-Seq Expression	Moc05g09550
Synteny	Moc05g09550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCCCGTAGAGAAGCAGAAGCAGATGCTCAGTCTTCCCTTTGATTATGTGACCTTGCTGAACAGCCAATTCAACCCCAACAATCAATTTTACGGCGATGTTTCGAGCTCTGGTTTTGCTCCGATATGGCAGTTGGACAATGTAATGCAAGCCAACAACTTTCCTGGTGAAATTCCCTTCGACTTCAATGCCTCTGTTCAAATTCCTTCTTTCGCTGCTGCTGCTGATGAAAATAACTTCCGTCCTACGATTCCTTTCAACCTCAATGTCATTACTCCAAATACTGTGACGTTGCCGAACACTCAATTCACCACTTTCACTCCAGCTTCTCAAAACAACCTCTATAACTATAACCCCAACAATCAATTTACAGCTTTCAGTTCTGCTCCTGAAAACAACCTCCCTCACAACCCCACATCGATCTCCATCAATGTGGGCAATCAGTATACTGGTTTGCTCTCCGATGTCATCAACTTCGACTCCGCACGACATAAGATGAAGAAACTGGAACACAAGTACGACAGCAGGCCTGTTTCAGAGACACAGTTTAACCAAGACTCCGTTTTGGATCAGAAACGTCCGTTGGAGTTCTCTTTGCAGCCGACCAATCGAATTCAAATTGTTCCCACGGATGCAGAAAACGAGTATAATTATACTGGTTTGCTCTCGGACATCATCAATTTCGACTCTGCACCAGATAAGAAGAAGAAATTCGAATCTTGGACGGAAGACGAGCACAAGTGAGTAACACACCCAACAAAAATAACCCTAATCTCCTCAGTTTTTGTTTTAACTCTGTTCAGACTCTGTTTTTTTTTTTTTTTAATCATGTTGCAACGGCTGTTTCAATTTGGTTGCAGGTTATTTTTGATTGGACTCCTGAAATTTGGGGAAGGAGATTGGAAAAACATAGCTACCAAAATTGTGCTCACTAAATCACCCACCCAAGTTGCAAGCCACAGTCAGAAATTCTTCCTCCGACAGCGCGTGCCGGAGCAGAATCGGAAAAGGTTGAGCATTCACGACATCACCACCGTAGATCCAGAGTCAATGGCGCGGTTACTCGCCGACCGGCAACGGCCTTCGTTGCCACCGGCACCCCCATTCTCGGTTAACACTACACCTCCGCCGCGGCCGCCACCACCACCTCCATCGTACTCTCCGTCAACACCGCCGCCGCAGCCGCAGCCACCTGTCAATTCTCCGCCTCTCCCACCGGATGGTCAATATTCCGAACCGCCGCCCTTACAACCTCCACCAGTATATCATTCATCCCCAATTGCATCGCCAGTCCATTACCAATCTCCTCCCTCACCTCCATCGTACTCTACATCAACGCCCCCATCTCCGTGGCCCACGCTTGCTGTTTATGAAAGCCTACTCTCACCAATCGACGGGGGCTATGGTTTTCCCCCACCTCCGCCCTCGTATTGA

mRNA sequence

ATGATTCCCGTAGAGAAGCAGAAGCAGATGCTCAGTCTTCCCTTTGATTATGTGACCTTGCTGAACAGCCAATTCAACCCCAACAATCAATTTTACGGCGATGTTTCGAGCTCTGGTTTTGCTCCGATATGGCAGTTGGACAATGTAATGCAAGCCAACAACTTTCCTGGTGAAATTCCCTTCGACTTCAATGCCTCTGTTCAAATTCCTTCTTTCGCTGCTGCTGCTGATGAAAATAACTTCCGTCCTACGATTCCTTTCAACCTCAATGTCATTACTCCAAATACTGTGACGTTGCCGAACACTCAATTCACCACTTTCACTCCAGCTTCTCAAAACAACCTCTATAACTATAACCCCAACAATCAATTTACAGCTTTCAGTTCTGCTCCTGAAAACAACCTCCCTCACAACCCCACATCGATCTCCATCAATGTGGGCAATCAGTATACTGGTTTGCTCTCCGATGTCATCAACTTCGACTCCGCACGACATAAGATGAAGAAACTGGAACACAAGTACGACAGCAGGCCTGTTTCAGAGACACAGTTTAACCAAGACTCCGTTTTGGATCAGAAACGTCCGTTGGAGTTCTCTTTGCAGCCGACCAATCGAATTCAAATTGTTCCCACGGATGCAGAAAACGAGTATAATTATACTGGTTTGCTCTCGGACATCATCAATTTCGACTCTGCACCAGATAAGAAGAAGAAATTCGAATCTTGGACGGAAGACGAGCACAAGTTATTTTTGATTGGACTCCTGAAATTTGGGGAAGGAGATTGGAAAAACATAGCTACCAAAATTGTGCTCACTAAATCACCCACCCAAGTTGCAAGCCACAGTCAGAAATTCTTCCTCCGACAGCGCGTGCCGGAGCAGAATCGGAAAAGGTTGAGCATTCACGACATCACCACCGTAGATCCAGAGTCAATGGCGCGGTTACTCGCCGACCGGCAACGGCCTTCGTTGCCACCGGCACCCCCATTCTCGGTTAACACTACACCTCCGCCGCGGCCGCCACCACCACCTCCATCGTACTCTCCGTCAACACCGCCGCCGCAGCCGCAGCCACCTGTCAATTCTCCGCCTCTCCCACCGGATGGTCAATATTCCGAACCGCCGCCCTTACAACCTCCACCAGTATATCATTCATCCCCAATTGCATCGCCAGTCCATTACCAATCTCCTCCCTCACCTCCATCGTACTCTACATCAACGCCCCCATCTCCGTGGCCCACGCTTGCTGTTTATGAAAGCCTACTCTCACCAATCGACGGGGGCTATGGTTTTCCCCCACCTCCGCCCTCGTATTGA

Coding sequence (CDS)

ATGATTCCCGTAGAGAAGCAGAAGCAGATGCTCAGTCTTCCCTTTGATTATGTGACCTTGCTGAACAGCCAATTCAACCCCAACAATCAATTTTACGGCGATGTTTCGAGCTCTGGTTTTGCTCCGATATGGCAGTTGGACAATGTAATGCAAGCCAACAACTTTCCTGGTGAAATTCCCTTCGACTTCAATGCCTCTGTTCAAATTCCTTCTTTCGCTGCTGCTGCTGATGAAAATAACTTCCGTCCTACGATTCCTTTCAACCTCAATGTCATTACTCCAAATACTGTGACGTTGCCGAACACTCAATTCACCACTTTCACTCCAGCTTCTCAAAACAACCTCTATAACTATAACCCCAACAATCAATTTACAGCTTTCAGTTCTGCTCCTGAAAACAACCTCCCTCACAACCCCACATCGATCTCCATCAATGTGGGCAATCAGTATACTGGTTTGCTCTCCGATGTCATCAACTTCGACTCCGCACGACATAAGATGAAGAAACTGGAACACAAGTACGACAGCAGGCCTGTTTCAGAGACACAGTTTAACCAAGACTCCGTTTTGGATCAGAAACGTCCGTTGGAGTTCTCTTTGCAGCCGACCAATCGAATTCAAATTGTTCCCACGGATGCAGAAAACGAGTATAATTATACTGGTTTGCTCTCGGACATCATCAATTTCGACTCTGCACCAGATAAGAAGAAGAAATTCGAATCTTGGACGGAAGACGAGCACAAGTTATTTTTGATTGGACTCCTGAAATTTGGGGAAGGAGATTGGAAAAACATAGCTACCAAAATTGTGCTCACTAAATCACCCACCCAAGTTGCAAGCCACAGTCAGAAATTCTTCCTCCGACAGCGCGTGCCGGAGCAGAATCGGAAAAGGTTGAGCATTCACGACATCACCACCGTAGATCCAGAGTCAATGGCGCGGTTACTCGCCGACCGGCAACGGCCTTCGTTGCCACCGGCACCCCCATTCTCGGTTAACACTACACCTCCGCCGCGGCCGCCACCACCACCTCCATCGTACTCTCCGTCAACACCGCCGCCGCAGCCGCAGCCACCTGTCAATTCTCCGCCTCTCCCACCGGATGGTCAATATTCCGAACCGCCGCCCTTACAACCTCCACCAGTATATCATTCATCCCCAATTGCATCGCCAGTCCATTACCAATCTCCTCCCTCACCTCCATCGTACTCTACATCAACGCCCCCATCTCCGTGGCCCACGCTTGCTGTTTATGAAAGCCTACTCTCACCAATCGACGGGGGCTATGGTTTTCCCCCACCTCCGCCCTCGTATTGA

Protein sequence

MIPVEKQKQMLSLPFDYVTLLNSQFNPNNQFYGDVSSSGFAPIWQLDNVMQANNFPGEIPFDFNASVQIPSFAAAADENNFRPTIPFNLNVITPNTVTLPNTQFTTFTPASQNNLYNYNPNNQFTAFSSAPENNLPHNPTSISINVGNQYTGLLSDVINFDSARHKMKKLEHKYDSRPVSETQFNQDSVLDQKRPLEFSLQPTNRIQIVPTDAENEYNYTGLLSDIINFDSAPDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRVPEQNRKRLSIHDITTVDPESMARLLADRQRPSLPPAPPFSVNTTPPPRPPPPPPSYSPSTPPPQPQPPVNSPPLPPDGQYSEPPPLQPPPVYHSSPIASPVHYQSPPSPPSYSTSTPPSPWPTLAVYESLLSPIDGGYGFPPPPPSY

Homology

[Close]

BLAST of Moc05g09550 vs. NCBI nr
Match: XP_022145143.1 (transcription factor SRM1-like [Momordica charantia])

HSP 1 Score: 115.9 bits (289), Expect = 8.6e-22
Identity = 63/143 (44.06%), Postives = 92/143 (64.34%), Query Frame = 0


Query: 178 PVSETQFNQDSVLDQKRPLEF-SLQPTNRIQIVPTDAENEYNYTGLLSDIINFDSAPDKK 237
           P   T  N++  +      ++ +  P + IQ    D  +  + T  +SD +    +P+KK
Sbjct: 20  PAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSD-LGPSPSPEKK 79

Query: 238 KKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRVPEQNR 297
           +K   WT+DEHKLFLIGL  +G+G WK+IAT++ +TK+  QVASH+QKF+ R+   EQ+R
Sbjct: 80  RKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSR 139

Query: 298 KRLSIHDITTVDPESMARLLADR 320
           KR SI+DITTVD E+M+R LA R
Sbjct: 140 KRSSINDITTVDVETMSRFLAGR 161

[Close]

BLAST of Moc05g09550 vs. NCBI nr
Match: XP_039024129.1 (transcription factor DIVARICATA-like [Hibiscus syriacus] >KAE8682471.1 Transcription factor DIVARICATA [Hibiscus syriacus])

HSP 1 Score: 112.5 bits (280), Expect = 9.5e-21
Identity = 51/82 (62.20%), Postives = 68/82 (82.93%), Query Frame = 0


Query: 227 INFDSAPDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFF 286
           I+F S  ++K+K   WTE+EHKLFLIGL KFG+GDW++I+  +V+T++PTQVASH+QK+F
Sbjct: 104 ISFTSKDNEKRKGTPWTEEEHKLFLIGLQKFGKGDWRSISRNVVITRTPTQVASHAQKYF 163

Query: 287 LRQRVPEQNRKRLSIHDITTVD 309
           LRQ   ++ RKR SIHDITTVD
Sbjct: 164 LRQSSVKKERKRSSIHDITTVD 185

[Close]

BLAST of Moc05g09550 vs. NCBI nr
Match: XP_022756064.1 (transcription factor DIVARICATA-like [Durio zibethinus])

HSP 1 Score: 110.9 bits (276), Expect = 2.8e-20
Identity = 52/101 (51.49%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 212 DAENEYNYTGLLSDIINFDSAPDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVL 271
           D++N+ ++T      +      +++KK   WTE+EHKLFLIGL KFG+GDW++I+  +V+
Sbjct: 99  DSDNQISFTSKSKQHVE-----NERKKGTPWTEEEHKLFLIGLHKFGKGDWRSISRNVVV 158

Query: 272 TKSPTQVASHSQKFFLRQRVPEQNRKRLSIHDITTVDPESM 313
           T++PTQVASH+QK+FLRQ   ++ RKR SIHDITTVD  +M
Sbjct: 159 TRTPTQVASHAQKYFLRQSSVKKERKRSSIHDITTVDSSTM 194

[Close]

BLAST of Moc05g09550 vs. NCBI nr
Match: XP_039066121.1 (transcription factor DIVARICATA-like [Hibiscus syriacus])

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-20
Identity = 52/97 (53.61%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 212 DAENEYNYTGLLSDIINFDSAPDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVL 271
           D+EN+ ++T           A +++KK   WTE+EH+LFLIGL KFG+GDW++I+  +V+
Sbjct: 96  DSENQISFTSKSKQ----QQADNERKKGTPWTEEEHRLFLIGLQKFGKGDWRSISRNVVI 155

Query: 272 TKSPTQVASHSQKFFLRQRVPEQNRKRLSIHDITTVD 309
           T++PTQVASH+QK+FLRQ    + RKR SIHDITTVD
Sbjct: 156 TRTPTQVASHAQKYFLRQSSIRKERKRSSIHDITTVD 188

[Close]

BLAST of Moc05g09550 vs. NCBI nr
Match: KAE8734808.1 (Transcription factor DIVARICATA [Hibiscus syriacus])

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-20
Identity = 52/97 (53.61%), Postives = 72/97 (74.23%), Query Frame = 0


Query: 212 DAENEYNYTGLLSDIINFDSAPDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVL 271
           D+EN+ ++T           A +++KK   WTE+EH+LFLIGL KFG+GDW++I+  +V+
Sbjct: 96  DSENQISFTSKSKQ----QQADNERKKGTPWTEEEHRLFLIGLQKFGKGDWRSISRNVVI 155

Query: 272 TKSPTQVASHSQKFFLRQRVPEQNRKRLSIHDITTVD 309
           T++PTQVASH+QK+FLRQ    + RKR SIHDITTVD
Sbjct: 156 TRTPTQVASHAQKYFLRQSSIRKERKRSSIHDITTVD 188

[Close]

BLAST of Moc05g09550 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.3e-17
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 235 KKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRVPEQ 294
           ++KK   WTE+EHKLFL+GL K+G+GDW+NI+   V+T++PTQVASH+QK+F+RQ    +
Sbjct: 127 ERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGK 186

Query: 295 NRKRLSIHDITTVDPESMARLLADRQRPSLPPAPPFSVNTTPPPRPPPPPPSYS 349
           +++R SIHDITTV+       L+D Q PS            P  + PP  P +S
Sbjct: 187 DKRRASIHDITTVN-------LSDNQTPS------------PDNKKPPSSPDHS 221

[Close]

BLAST of Moc05g09550 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.9e-09
Identity = 56/160 (35.00%), Postives = 87/160 (54.37%), Query Frame = 0


Query: 235 KKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRVPEQ 294
           +++K  +WTEDEH+LFL+GL K+G+GDW++I+   V+T++PTQVASH+QK+F+R     +
Sbjct: 113 ERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNK 172

Query: 295 NRKRLSIHDITTVDPESMARLLA----------------DRQRPSLPPAPPFSVNTTPPP 354
           +R+R SIHDIT+V    ++                    +   P++      S       
Sbjct: 173 DRRRSSIHDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAGGGNKSAKQAVSQ 232

Query: 355 RPPPPPPSYSPSTPPPQPQPPVN--SPPLPPDGQYSEPPP 377
            PP PP   +P+   P    PVN  +PP    G ++ P P
Sbjct: 233 APPGPPMYGTPAIGQPAVGTPVNLPAPPHMAYGVHAAPVP 272

[Close]

BLAST of Moc05g09550 vs. ExPASy Swiss-Prot
Match: Q9T0K5 (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=LRX3 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-07
Identity = 59/114 (51.75%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 325 PPAPPFSVNTTPPPRPPPPPPSYS-PSTPPPQPQPPVNSPPLPPDGQYSEPPPLQPPPVY 384
           PP+PP  V + PPP PPPPPP YS P  PPP P PPV SPP PP      PPP  PPPVY
Sbjct: 428 PPSPPPPVYSPPPP-PPPPPPVYSPPPPPPPPPPPPVYSPPPPP------PPPPPPPPVY 487

Query: 385 HSSPIASPVHYQSPPSPPSYSTSTPPSPWPTLAVYESLLSPIDGGYGFPPPPPS 438
              P + P     PP PP YS   PP P P   VY     P+   Y  PPPPPS
Sbjct: 488 SPPPPSPP-----PPPPPVYSPPPPPPPPPPPPVYSPPPPPV---YSSPPPPPS 526

[Close]

BLAST of Moc05g09550 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-07
Identity = 60/175 (34.29%), Postives = 90/175 (51.43%), Query Frame = 0


Query: 232 APDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRV 291
           A  +++K   WTE+EH+LFL+GL KFG+GDW++I+   V++++PTQVASH+QK+F+R   
Sbjct: 134 AEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNS 193

Query: 292 PEQNRKRLSIHDITTVDPESMARL-----LADRQRPSLPPAPPFSVNTTPPPRPPPPPPS 351
             ++R+R SIHDIT+V             +   Q    P A         PP        
Sbjct: 194 MNRDRRRSSIHDITSVTAGDQVAAQQGAPITGHQATGNPAAAALG-----PPGMKHHHHH 253

Query: 352 YSPSTPPPQPQPPVNSPPLPPDGQYSEPPPLQPPPVY--HSSPIASPVHYQSPPS 400
           +    PPP P     +P   P   +  P  +  P V+    +P   PV Y +PP+
Sbjct: 254 HPGGAPPPMPMYSA-APMGHPVAGHMVPAAVGTPVVFPPGHAPYVVPVGYPAPPA 302

[Close]

BLAST of Moc05g09550 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-07
Identity = 60/175 (34.29%), Postives = 90/175 (51.43%), Query Frame = 0


Query: 232 APDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRV 291
           A  +++K   WTE+EH+LFL+GL KFG+GDW++I+   V++++PTQVASH+QK+F+R   
Sbjct: 134 AEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNS 193

Query: 292 PEQNRKRLSIHDITTVDPESMARL-----LADRQRPSLPPAPPFSVNTTPPPRPPPPPPS 351
             ++R+R SIHDIT+V             +   Q    P A         PP        
Sbjct: 194 MNRDRRRSSIHDITSVTAGDQVAAQQGAPITGHQATGNPAAAALG-----PPGMKHHHHH 253

Query: 352 YSPSTPPPQPQPPVNSPPLPPDGQYSEPPPLQPPPVY--HSSPIASPVHYQSPPS 400
           +    PPP P     +P   P   +  P  +  P V+    +P   PV Y +PP+
Sbjct: 254 HPGGAPPPMPMYSA-APMGHPVAGHMVPAAVGTPVVFPPGHAPYVVPVGYPAPPA 302

[Close]

BLAST of Moc05g09550 vs. ExPASy TrEMBL
Match: A0A6J1CV56 (transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.2e-22
Identity = 63/143 (44.06%), Postives = 92/143 (64.34%), Query Frame = 0


Query: 178 PVSETQFNQDSVLDQKRPLEF-SLQPTNRIQIVPTDAENEYNYTGLLSDIINFDSAPDKK 237
           P   T  N++  +      ++ +  P + IQ    D  +  + T  +SD +    +P+KK
Sbjct: 20  PAGRTPTNENHCIGNDIMSDYLTYSPLSSIQWELEDGSSALDPTTPVSD-LGPSPSPEKK 79

Query: 238 KKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRVPEQNR 297
           +K   WT+DEHKLFLIGL  +G+G WK+IAT++ +TK+  QVASH+QKF+ R+   EQ+R
Sbjct: 80  RKVTCWTKDEHKLFLIGLQIYGKGHWKSIATEVAVTKTAAQVASHAQKFYSRKLSSEQSR 139

Query: 298 KRLSIHDITTVDPESMARLLADR 320
           KR SI+DITTVD E+M+R LA R
Sbjct: 140 KRSSINDITTVDVETMSRFLAGR 161

[Close]

BLAST of Moc05g09550 vs. ExPASy TrEMBL
Match: A0A6A2YSL0 (Transcription factor DIVARICATA OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111238pilonHSYRG00070 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.6e-21
Identity = 51/82 (62.20%), Postives = 68/82 (82.93%), Query Frame = 0


Query: 227 INFDSAPDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFF 286
           I+F S  ++K+K   WTE+EHKLFLIGL KFG+GDW++I+  +V+T++PTQVASH+QK+F
Sbjct: 104 ISFTSKDNEKRKGTPWTEEEHKLFLIGLQKFGKGDWRSISRNVVITRTPTQVASHAQKYF 163

Query: 287 LRQRVPEQNRKRLSIHDITTVD 309
           LRQ   ++ RKR SIHDITTVD
Sbjct: 164 LRQSSVKKERKRSSIHDITTVD 185

[Close]

BLAST of Moc05g09550 vs. ExPASy TrEMBL
Match: A0A5D2P1I7 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G125900v1 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-20
Identity = 49/78 (62.82%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 235 KKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRVPEQ 294
           ++KK   WTE+EHKLFLIGL KFG+GDW++I+  +V+T++PTQVASH+QK+FLRQ   ++
Sbjct: 117 ERKKGTPWTEEEHKLFLIGLQKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQSAVKK 176

Query: 295 NRKRLSIHDITTVDPESM 313
            RKR SIHDITTVD ++M
Sbjct: 177 ERKRSSIHDITTVDSKTM 194

[Close]

BLAST of Moc05g09550 vs. ExPASy TrEMBL
Match: A0A5D2JFU7 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D09G124300v1 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-20
Identity = 49/78 (62.82%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 235 KKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRVPEQ 294
           ++KK   WTE+EHKLFLIGL KFG+GDW++I+  +V+T++PTQVASH+QK+FLRQ   ++
Sbjct: 117 ERKKGTPWTEEEHKLFLIGLQKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQSAVKK 176

Query: 295 NRKRLSIHDITTVDPESM 313
            RKR SIHDITTVD ++M
Sbjct: 177 ERKRSSIHDITTVDSKTM 194

[Close]

BLAST of Moc05g09550 vs. ExPASy TrEMBL
Match: A0A1U8N0A7 (transcription factor DIVARICATA-like OS=Gossypium hirsutum OX=3635 GN=LOC107943249 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-20
Identity = 49/78 (62.82%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 235 KKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRVPEQ 294
           ++KK   WTE+EHKLFLIGL KFG+GDW++I+  +V+T++PTQVASH+QK+FLRQ   ++
Sbjct: 117 ERKKGTPWTEEEHKLFLIGLQKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQSAVKK 176

Query: 295 NRKRLSIHDITTVDPESM 313
            RKR SIHDITTVD ++M
Sbjct: 177 ERKRSSIHDITTVDSKTM 194

[Close]

BLAST of Moc05g09550 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 4.1e-22
Identity = 45/74 (60.81%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 235 KKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRVPEQ 294
           ++K+   WTE+EHKLFLIGL ++G+GDW++I+  +V+T++PTQVASH+QK+FLRQ   ++
Sbjct: 94  ERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKK 153

Query: 295 NRKRLSIHDITTVD 309
            RKR SIHDITTVD
Sbjct: 154 ERKRSSIHDITTVD 167

[Close]

BLAST of Moc05g09550 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 102.4 bits (254), Expect = 9.2e-22
Identity = 46/81 (56.79%), Postives = 65/81 (80.25%), Query Frame = 0


Query: 235 KKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRVPEQ 294
           ++KK   WTE+EHKLFL+GL K+G+GDW+NI+   V+T++PTQVASH+QK+F+RQ    +
Sbjct: 136 ERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGK 195

Query: 295 NRKRLSIHDITTVDPESMARL 316
           +++R SIHDITTV+ E  A L
Sbjct: 196 DKRRASIHDITTVNLEEEASL 216

[Close]

BLAST of Moc05g09550 vs. TAIR 10
Match: AT2G38090.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 5.9e-21
Identity = 50/100 (50.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 231 SAPDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQR 290
           +A  ++KK   WTE+EH+ FL+GL K+G+GDW+NIA   V T++PTQVASH+QK+F+RQ 
Sbjct: 132 TAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQV 191

Query: 291 VPEQNRKRLSIHDITTVD-PESMARLLADRQRPSLPPAPP 330
              ++++R SIHDITTV+ P+S     AD    + P +PP
Sbjct: 192 NGGKDKRRSSIHDITTVNIPDSPDAAAADNATANAPCSPP 231

[Close]

BLAST of Moc05g09550 vs. TAIR 10
Match: AT5G01200.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 8.6e-20
Identity = 54/119 (45.38%), Postives = 75/119 (63.03%), Query Frame = 0


Query: 223 LSDIINFDSAPDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHS 282
           ++D         ++KK   WTEDEH  FL+GL K+G+GDW+NIA   V T++PTQVASH+
Sbjct: 129 MTDCFRSPMPEKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHA 188

Query: 283 QKFFLRQRVPEQNRKRLSIHDITTVD-PESMARLLADRQRPSLPPAPPFSVNTTPPPRP 341
           QK+FLRQ    ++++R SIHDITTV+ P++ A   A     +L P P  S +    P P
Sbjct: 189 QKYFLRQLTDGKDKRRSSIHDITTVNIPDADASATATTADVALSPTPANSFDVFLQPNP 247

[Close]

BLAST of Moc05g09550 vs. TAIR 10
Match: AT1G49010.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 2.5e-11
Identity = 70/191 (36.65%), Postives = 104/191 (54.45%), Query Frame = 0


Query: 232 APDKKKKFESWTEDEHKLFLIGLLKFGEGDWKNIATKIVLTKSPTQVASHSQKFFLRQRV 291
           A  +++K   WTE+EH+LFL+GL KFG+GDW++I+   V++++PTQVASH+QK+F+R   
Sbjct: 126 AEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNS 185

Query: 292 PEQNRKRLSIHDITTVDPESMARLLADRQRPSLPPAPPFSVNTTPPPRPPPPPPSYSPST 351
             ++R+R SIHDITTV+ ++ A +    Q+P +    P      P P+P P P  + P T
Sbjct: 186 MNRDRRRSSIHDITTVNNQAPA-VTGGGQQPQVVKHRP----AQPQPQPQPQPQQHHPPT 245

Query: 352 PPPQPQ---PPVNSPPL-PPD--GQYSEPPPLQPPPV------YHSSPIASPVHYQSPPS 411
                     PV  P + PPD  G     P + PPP+      +H     +P    + P 
Sbjct: 246 MAGLGMYGGAPVGQPIIAPPDHMGSAVGTPVMLPPPMGTHHHHHHHHLGVAPYAVPAYPV 305

The following BLAST results are available for this feature:

BLAST of Moc05g09550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145143.1	8.6e-22	44.06	transcription factor SRM1-like [Momordica charantia]	[more]
XP_039024129.1	9.5e-21	62.20	transcription factor DIVARICATA-like [Hibiscus syriacus] >KAE8682471.1 Transcrip...	[more]
XP_022756064.1	2.8e-20	51.49	transcription factor DIVARICATA-like [Durio zibethinus]	[more]
XP_039066121.1	3.6e-20	53.61	transcription factor DIVARICATA-like [Hibiscus syriacus]	[more]
KAE8734808.1	3.6e-20	53.61	Transcription factor DIVARICATA [Hibiscus syriacus]	[more]

BLAST of Moc05g09550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9H7	2.3e-17	46.49	Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ...	[more]
Q9FNN6	3.9e-09	35.00	Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1	[more]
Q9T0K5	1.6e-07	51.75	Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
B8A9B2	1.6e-07	34.29	Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ...	[more]
Q8LH59	1.6e-07	34.29	Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=...	[more]

BLAST of Moc05g09550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CV56	4.2e-22	44.06	transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE...	[more]
A0A6A2YSL0	4.6e-21	62.20	Transcription factor DIVARICATA OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111...	[more]
A0A5D2P1I7	2.3e-20	62.82	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G125900v1 P...	[more]
A0A5D2JFU7	2.3e-20	62.82	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D09G124300v1 P...	[more]
A0A1U8N0A7	2.3e-20	62.82	transcription factor DIVARICATA-like OS=Gossypium hirsutum OX=3635 GN=LOC1079432...	[more]

BLAST of Moc05g09550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04760.1	4.1e-22	60.81	Duplicated homeodomain-like superfamily protein	[more]
AT5G58900.1	9.2e-22	56.79	Homeodomain-like transcriptional regulator	[more]
AT2G38090.1	5.9e-21	50.00	Duplicated homeodomain-like superfamily protein	[more]
AT5G01200.1	8.6e-20	45.38	Duplicated homeodomain-like superfamily protein	[more]
AT1G49010.1	2.5e-11	36.65	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 342..354 score: 60.0 coord: 322..338 score: 29.41 coord: 354..375 score: 33.64 coord: 385..401 score: 32.94
None	No IPR available	GENE3D	1.10.10.60		coord: 239..291 e-value: 6.4E-15 score: 57.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..386
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 320..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 393..408
None	No IPR available	PANTHER	PTHR44042:SF15	SYRINGOLIDE-INDUCED PROTEIN 1-3-1B	coord: 143..320
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 238..288 e-value: 8.6E-6 score: 35.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 234..286 score: 6.318553
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 241..281 e-value: 6.39237E-7 score: 43.7182
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 237..289 e-value: 4.2E-13 score: 47.4
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 241..284 e-value: 1.8E-7 score: 31.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 234..290 score: 14.78618
IPR043363	Transcription factor DIVARICATA-like	PANTHER	PTHR44042	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 143..320
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 237..290 score: 9.906008
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 235..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g09550.1	Moc05g09550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding