Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATTGGTGAGCAGTCGAGTTTCGAAGGAATTATGAGGTTCGATGGAGCCAACTTTGGGTATTGGAAAATGCAGATTAAGGATTACTTAACTTGCAAAAAGGTGCACAAAGCGTTGAAGGAACGACCAGCTGGAATGAAGCTTGAAGATTGGGAAGATATGGATGAACAGGCAGTTGCAATTATTAGGTTGTGTCTATCAATGAATGTAGCAAGTCTCGTGGCAAATGAGACAACAGCGATAGGTCTGATGAATGCACTGACCAACATGTATGAAAAATAATCTGCCAATAATAAGGTATATCTTGTTAGAAGATATTTTAACATTCGTATGGATGAGAATGCTTCTGTGAATTCCCATATAAATGAAGTCACTAATTTAATCAATCAGTTAGCGTCTCTGAAGATTACATTTAGTGATGAGGTGAATGCTATTTTATTGTTGACTTCTTTGCCTGAAAGTTGGGAAACAATGAAGACAGCTGTGTCTAATTCATTAGGAGATAAGAGTTTAAAATTTACAGAAATTTGTGATGCTGCAACTGCTGAGGAAATTCGCAGGAAAGAGAGTGGAAAAGAATCCACTTCTAGTTCTGCATCTGGCTCAGCATTAGCTGTTCAGAGAGGTAAAGAAAAGGTTGAGTATGATGACAGACAACATAGAAATAGCAGGAAAAATGGGAATGGTGAGATTGAATGTTATTACTGCCACAAGAAGGGCCACTATAAGAGGCACTGTAGAAAATTGAAAGAGGATCTGAAAAAGCTGGATGCAAATGCAAATGCAGTTGTGCATGATGCTCTTGTGTGTGTTGAGAGTAACACAATGTCGGTGGACCAGTCACCAGAATGGATAGTAGACAGTGTAGCTTCAGTACACATCTCTTCAGATAGGAGGTTGTTCACATCTTTCACTGCAGAAAACTATGGCATGGTGAGGATGGGAAATGGTAGGCTCTCCAAGACTAGAGGAATTGGAAATATCAGTCTGAAGACCGATAGTGGGACTGAGTTGGTTTTGCGAGATGTTAGGTATGTACCCAGCATCAGAATGAATTTAATATCTGCAGGGAAGTTGGATGACGATGGTTACAGAAGTGAGTTTGCTGGAAATATGTGGAAACTCACTAGAGGATCCGAGCTGGTGGTTGTTGGCCACAGGACATCTACAGTGTACACAGTGAGGTTTGATGTTGCCAAAGGATCAGAGAGACAGAGGATGCATAGAGCTGCAAATGGTTTAGATGGAGACGGGATAAAACCAACAGCATTGACAACCAAGATAGATCCATCAGTTCATGTTCAACAATCGGGAGGCAAGGATAAGGAAAAGAAAAAGAGTTTAGTTGGTTGTGAGGTGATAGCCCCAGTTGTCAGACGGTTCAACGAATTGATGAAGTCGCATAGGCGAAAAGATGCATCGAAGAGGAAGACTACAGTTGGTGCTGAGGTCGAGGCTGAAGTCTCTAGCTTGGTAACAGACTTAAGTGGGAGTGTCAAGTCATCGAAGAAGAATTCTTTCTTTGGGAGTCGTTGGCCACGATCGAAGAAGGAAGCTTTGGGAGGTACCACTTAG
mRNA sequence
ATGGGAATTGGTGAGCAGTCGAGTTTCGAAGGAATTATGAGGTTCGATGGAGCCAACTTTGGGTATTGGAAAATGCAGATTAAGGATTACTTAACTTGCAAAAAGGTGCACAAAGCGTTGAAGGAACGACCAGCTGGAATGAAGCTTGAAGATTGGGAAGATATGGATGAACAGGCAGTTGCAATTATTAGGTTGTGTCTATCAATGAATGTAGCAAGTCTCGTGGCAAATGAGACAACAGCGATAGCGTCTCTGAAGATTACATTTAGTGATGAGGTGAATGCTATTTTATTGTTGACTTCTTTGCCTGAAAGTTGGGAAACAATGAAGACAGCTGTGTCTAATTCATTAGGAGATAAGAGTTTAAAATTTACAGAAATTTGTGATGCTGCAACTGCTGAGGAAATTCGCAGGAAAGAGAGTGGAAAAGAATCCACTTCTAGTTCTGCATCTGGCTCAGCATTAGCTGTTCAGAGAGGTAAAGAAAAGGTTGAGTATGATGACAGACAACATAGAAATAGCAGGAAAAATGGGAATGGTGAGATTGAATGTTATTACTGCCACAAGAAGGGCCACTATAAGAGGCACTGTAGAAAATTGAAAGAGGATCTGAAAAAGCTGGATGCAAATGCAAATGCAGTTGTGCATGATGCTCTTGTGTGTGTTGAGAGTAACACAATGTCGGTGGACCAGTCACCAGAATGGATAGTAGACAGTGTAGCTTCAGTACACATCTCTTCAGATAGGAGGTTGTTCACATCTTTCACTGCAGAAAACTATGGCATGGTGAGGATGGGAAATGGTAGGCTCTCCAAGACTAGAGGAATTGGAAATATCAGTCTGAAGACCGATAGTGGGACTGAGTTGGTTTTGCGAGATGTTAGGTATGTACCCAGCATCAGAATGAATTTAATATCTGCAGGGAAGTTGGATGACGATGGTTACAGAAGTGAGTTTGCTGGAAATATGTGGAAACTCACTAGAGGATCCGAGCTGGTGGTTGTTGGCCACAGGACATCTACAGTGTACACAGTGAGGTTTGATGTTGCCAAAGGATCAGAGAGACAGAGGATGCATAGAGCTGCAAATGGTTTAGATGGAGACGGGATAAAACCAACAGCATTGACAACCAAGATAGATCCATCAGTTCATGTTCAACAATCGGGAGGCAAGGATAAGGAAAAGAAAAAGAGTTTAGTTGGTTGTGAGGTGATAGCCCCAGTTGTCAGACGGTTCAACGAATTGATGAAGTCGCATAGGCGAAAAGATGCATCGAAGAGGAAGACTACAGTTGGTGCTGAGGTCGAGGCTGAAGTCTCTAGCTTGGTAACAGACTTAAGTGGGAGTGTCAAGTCATCGAAGAAGAATTCTTTCTTTGGGAGTCGTTGGCCACGATCGAAGAAGGAAGCTTTGGGAGGTACCACTTAG
Coding sequence (CDS)
ATGGGAATTGGTGAGCAGTCGAGTTTCGAAGGAATTATGAGGTTCGATGGAGCCAACTTTGGGTATTGGAAAATGCAGATTAAGGATTACTTAACTTGCAAAAAGGTGCACAAAGCGTTGAAGGAACGACCAGCTGGAATGAAGCTTGAAGATTGGGAAGATATGGATGAACAGGCAGTTGCAATTATTAGGTTGTGTCTATCAATGAATGTAGCAAGTCTCGTGGCAAATGAGACAACAGCGATAGCGTCTCTGAAGATTACATTTAGTGATGAGGTGAATGCTATTTTATTGTTGACTTCTTTGCCTGAAAGTTGGGAAACAATGAAGACAGCTGTGTCTAATTCATTAGGAGATAAGAGTTTAAAATTTACAGAAATTTGTGATGCTGCAACTGCTGAGGAAATTCGCAGGAAAGAGAGTGGAAAAGAATCCACTTCTAGTTCTGCATCTGGCTCAGCATTAGCTGTTCAGAGAGGTAAAGAAAAGGTTGAGTATGATGACAGACAACATAGAAATAGCAGGAAAAATGGGAATGGTGAGATTGAATGTTATTACTGCCACAAGAAGGGCCACTATAAGAGGCACTGTAGAAAATTGAAAGAGGATCTGAAAAAGCTGGATGCAAATGCAAATGCAGTTGTGCATGATGCTCTTGTGTGTGTTGAGAGTAACACAATGTCGGTGGACCAGTCACCAGAATGGATAGTAGACAGTGTAGCTTCAGTACACATCTCTTCAGATAGGAGGTTGTTCACATCTTTCACTGCAGAAAACTATGGCATGGTGAGGATGGGAAATGGTAGGCTCTCCAAGACTAGAGGAATTGGAAATATCAGTCTGAAGACCGATAGTGGGACTGAGTTGGTTTTGCGAGATGTTAGGTATGTACCCAGCATCAGAATGAATTTAATATCTGCAGGGAAGTTGGATGACGATGGTTACAGAAGTGAGTTTGCTGGAAATATGTGGAAACTCACTAGAGGATCCGAGCTGGTGGTTGTTGGCCACAGGACATCTACAGTGTACACAGTGAGGTTTGATGTTGCCAAAGGATCAGAGAGACAGAGGATGCATAGAGCTGCAAATGGTTTAGATGGAGACGGGATAAAACCAACAGCATTGACAACCAAGATAGATCCATCAGTTCATGTTCAACAATCGGGAGGCAAGGATAAGGAAAAGAAAAAGAGTTTAGTTGGTTGTGAGGTGATAGCCCCAGTTGTCAGACGGTTCAACGAATTGATGAAGTCGCATAGGCGAAAAGATGCATCGAAGAGGAAGACTACAGTTGGTGCTGAGGTCGAGGCTGAAGTCTCTAGCTTGGTAACAGACTTAAGTGGGAGTGTCAAGTCATCGAAGAAGAATTCTTTCTTTGGGAGTCGTTGGCCACGATCGAAGAAGGAAGCTTTGGGAGGTACCACTTAG
Protein sequence
MGIGEQSSFEGIMRFDGANFGYWKMQIKDYLTCKKVHKALKERPAGMKLEDWEDMDEQAVAIIRLCLSMNVASLVANETTAIASLKITFSDEVNAILLLTSLPESWETMKTAVSNSLGDKSLKFTEICDAATAEEIRRKESGKESTSSSASGSALAVQRGKEKVEYDDRQHRNSRKNGNGEIECYYCHKKGHYKRHCRKLKEDLKKLDANANAVVHDALVCVESNTMSVDQSPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGRLSKTRGIGNISLKTDSGTELVLRDVRYVPSIRMNLISAGKLDDDGYRSEFAGNMWKLTRGSELVVVGHRTSTVYTVRFDVAKGSERQRMHRAANGLDGDGIKPTALTTKIDPSVHVQQSGGKDKEKKKSLVGCEVIAPVVRRFNELMKSHRRKDASKRKTTVGAEVEAEVSSLVTDLSGSVKSSKKNSFFGSRWPRSKKEALGGTT
Homology
BLAST of Moc05g09520 vs. NCBI nr
Match:
XP_034902342.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC118039689 [Populus alba])
HSP 1 Score: 234.2 bits (596), Expect = 2.3e-57
Identity = 146/377 (38.73%), Postives = 215/377 (57.03%), Query Frame = 0
Query: 11 GIMRFDGANFGYWKMQIKDYLTCKKVH-KALKERPAGMKLEDWEDMDEQAVAIIRLCLSM 70
GI +FDG +FGYWKMQI+DYL KK+H L +P M+ E+W+ +D Q + II+L LS
Sbjct: 9 GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGSKPEKMEAEEWQLLDRQVLGIIQLSLSR 68
Query: 71 NVASLVANE-----------------------TTAIASLKITFSDEVNAILLLTSLPESW 130
VA V E T ++S++I F DE+ A++LL SLP SW
Sbjct: 69 RVAHNVTKEKSTAKLMEALSGMYEKLSANNTITNQLSSVEIEFDDEIRALILLASLPSSW 128
Query: 131 ETMKTAVSNSLGDKSLKFTEICDAATAEEIRRKESGKESTSSSASGSALAV--------- 190
E M+TAVSNS G LK+ +I D AEE+RRK+SG+ SS+SGSAL +
Sbjct: 129 EGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRGRRQDR 188
Query: 191 --QRGKEKVEYDDRQHRNSRKNGNGEIECYYCHKKGHYKRHCRKLKEDLKKLDANANAV- 250
RG+ K Y + SRK ++EC+ C K GH+ R+C K K+ K D+ +
Sbjct: 189 GSSRGRSKSRYRSKSKFGSRK----QVECWNCGKPGHFSRNCTKPKK--PKADSTNATID 248
Query: 251 -VHDALVCVESNTMSVDQSPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGRLSKT 310
V DA++ V + Q EWI+DS AS H + + ++ ++G+V + +G
Sbjct: 249 EVQDAIILVVQS-----QIDEWILDSGASFHCTPHNEMLQNYVGGDHGVVYLADGTPLNI 308
Query: 311 RGIGNISLKTDSGTELVLRDVRYVPSIRMNLISAGKLDDDGYRSEFAGNMWKLTRGSELV 350
GIG++ +KT +G+ L++VR+VP ++ LIS G+LDD G+ FAG MWK+++G+ ++
Sbjct: 309 VGIGDVQIKTMNGSIWTLQNVRHVPELKKKLISVGQLDDSGHSILFAGGMWKVSKGAMVL 368
BLAST of Moc05g09520 vs. NCBI nr
Match:
TKS15174.1 (hypothetical protein D5086_0000036030 [Populus alba])
HSP 1 Score: 232.3 bits (591), Expect = 8.9e-57
Identity = 142/372 (38.17%), Postives = 212/372 (56.99%), Query Frame = 0
Query: 11 GIMRFDGANFGYWKMQIKDYLTCKKVH-KALKERPAGMKLEDWEDMDEQAVAIIRLCLSM 70
GI +FDG +FGYWKMQI+DYL KK+H L +P M+ E+W+ +D Q + II+L LS
Sbjct: 9 GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGSKPEKMEAEEWQLLDRQVLGIIQLSLSR 68
Query: 71 NVASLVANE-----------------------TTAIASLKITFSDEVNAILLLTSLPESW 130
VA V E T ++S++I F DE+ A++LL SLP SW
Sbjct: 69 RVAHNVTKEKSTAKLMEALSGMYEKLSANNTITNQLSSVEIEFDDEIRALILLASLPSSW 128
Query: 131 ETMKTAVSNSLGDKSLKFTEICDAATAEEIRRKESGKESTSSSASGSALAV--------- 190
E M+TAVSNS G LK+ +I D AEE+RRK+SG+ SS+SGSAL +
Sbjct: 129 EGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRGRRQDR 188
Query: 191 --QRGKEKVEYDDRQHRNSRKNGNGEIECYYCHKKGHYKRHCRKLKEDLKKLDANANAV- 250
RG+ K Y + SRK ++EC+ C K GH+ R+C K K+ K D+ +
Sbjct: 189 GSSRGRSKSRYRSKSKFGSRK----QVECWNCGKPGHFSRNCTKPKK--PKADSTNATID 248
Query: 251 -VHDALVCVESNTMSVDQSPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGRLSKT 310
V DA++ V + Q EWI+DS AS H + + ++ ++G+V + +G
Sbjct: 249 EVQDAIILVVQS-----QIDEWILDSGASFHCTPHNEMLQNYVGGDHGVVYLADGTPLNI 308
Query: 311 RGIGNISLKTDSGTELVLRDVRYVPSIRMNLISAGKLDDDGYRSEFAGNMWKLTRGSELV 346
GIG++ +KT +G+ L++VR+VP ++ LIS G+LDD G+ FAG MWK+++G+ ++
Sbjct: 309 VGIGDVQIKTMNGSIWTLQNVRHVPELKKKLISVGQLDDSGHSILFAGGMWKVSKGAMVL 365
BLAST of Moc05g09520 vs. NCBI nr
Match:
KAG5549868.1 (hypothetical protein RHGRI_014986 [Rhododendron griersonianum])
HSP 1 Score: 231.1 bits (588), Expect = 2.0e-56
Identity = 148/407 (36.36%), Postives = 215/407 (52.83%), Query Frame = 0
Query: 12 IMRFDGANFGYWKMQIKDYLTCKKVHKALK---ERPAGMKLEDWEDMDEQAVAIIRLCLS 71
++ F+G N+ WK++++D L CK +H ++ +P MK EDW ++ +AV +IR +
Sbjct: 8 MISFNGTNWVTWKIKMEDLLYCKDLHGPVEGDTAKPIDMKREDWTILNRKAVGLIRQWID 67
Query: 72 MNVASLVANETTA----------------------------------------------- 131
+V V+ ET+A
Sbjct: 68 DSVFHHVSTETSAYDLWKKLESLYDRKSATNKAFLFKKLVNLKFKEGKSIAEHLNEMNSI 127
Query: 132 ---IASLKITFSDEVNAILLLTSLPESWETMKTAVSNSLGDKSLKFTEICDAATAEEIRR 191
+AS+KI F DE+ A++LL+SLPE+WET+ VSNS D + +++ + EE RR
Sbjct: 128 VNQLASMKIVFDDELQALMLLSSLPETWETLVVTVSNSAPDGVVSKSQVTSSLLNEETRR 187
Query: 192 KESGKESTSSSASGSALAVQRGKEKVEYDDRQHRNS---RKNGNGEIECYYCHKKGHYKR 251
K +G S S + + RG+ ++ Q R S R +IEC+YC KKGH KR
Sbjct: 188 KSTG-SSHSEALVVNPRGRPRGRSSTPHNRDQSRGSSRGRSPSKQDIECHYCKKKGHMKR 247
Query: 252 HCRKLK-------EDLKKLDANANAVVHD---ALVCVESNTMSVDQSPEWIVDSVASVHI 311
C KLK + K N AV D +VC ES V Q W++DS AS H+
Sbjct: 248 ECLKLKFKEENRAKHGDKKQENTTAVSSDGELVVVCDESCVNLVSQDTNWVIDSGASFHV 307
Query: 312 SSDRRLFTSFTAENYGMVRMGNGRLSKTRGIGNISLKTDSGTELVLRDVRYVPSIRMNLI 353
+S FTS+ ++G VRMGN LSK G+GNI L+T G +LVL+DVR+VP IR+NLI
Sbjct: 308 TSRADFFTSYNEGDFGCVRMGNEGLSKIVGMGNICLETSVGCKLVLKDVRHVPDIRLNLI 367
BLAST of Moc05g09520 vs. NCBI nr
Match:
RVX08463.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 230.7 bits (587), Expect = 2.6e-56
Identity = 137/356 (38.48%), Postives = 208/356 (58.43%), Query Frame = 0
Query: 5 EQSSFEGIMRFDGANFGYWKMQIKDYLTCKKVH-KALKERPAGMKLEDWEDMDEQAVAII 64
E GI +FDG +F YW+MQI+DYL +K+H L +P MK E+W D Q + +I
Sbjct: 4 EAGKASGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWVLFDRQVLGVI 63
Query: 65 RLCLSMNVASLVANETTAIASLK----ITFSDEVNAILLLTSLPESWETMKTAVSNSLGD 124
RL LS +VA V E T +K I F DE+ A+++L SLP SWE M+ AVSNS G
Sbjct: 64 RLTLSRSVAHNVVKEKTTADLMKALSEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGK 123
Query: 125 KSLKFTEICDAATAEEIRRKESGKESTSSSASGSALAVQ---RGKEKVEYDDRQH-RNSR 184
+ LK+ +I D AEEIRR+++G+ +S SGSAL ++ RG + R + RNS
Sbjct: 124 EKLKYNDIRDLILAEEIRRRDAGE----TSGSGSALNLETRGRGNNRNSNQGRSNSRNSN 183
Query: 185 KN-----GNGEIECYYCHKKGHYKRHCRKLKEDLKKLDANANAV---VHDALVCVESNTM 244
+N +++C+ C K GH+KR C+ K+ K D +ANAV V DAL+ + +
Sbjct: 184 RNISKSRSGQQVQCWNCGKTGHFKRQCKSPKK--KNEDDSANAVTEEVQDALLLAVDSPL 243
Query: 245 SVDQSPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGRLSKTRGIGNISLKTDSGT 304
+W++DS AS H + R + ++ A ++G V + +G G+G++ + +G
Sbjct: 244 D-----DWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGY 303
Query: 305 ELVLRDVRYVPSIRMNLISAGKLDDDGYRSEFAGNMWKLTRGSELVVVGHRTSTVY 344
+L VR++P +R NLIS G+LDD+GY F G WK+T+G+ ++ G +T+T+Y
Sbjct: 304 VWLLEKVRHIPDLRRNLISVGQLDDEGYAILFVGGTWKVTKGARVLARGKKTNTLY 348
BLAST of Moc05g09520 vs. NCBI nr
Match:
CAN65867.1 (hypothetical protein VITISV_034935 [Vitis vinifera])
HSP 1 Score: 230.7 bits (587), Expect = 2.6e-56
Identity = 136/356 (38.20%), Postives = 209/356 (58.71%), Query Frame = 0
Query: 5 EQSSFEGIMRFDGANFGYWKMQIKDYLTCKKVH-KALKERPAGMKLEDWEDMDEQAVAII 64
E GI +FDG +F YW+MQI+DYL +K+H L +P MK E+W +D Q + +I
Sbjct: 4 EAGKASGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVI 63
Query: 65 RLCLSMNVASLVANETTAIASLK----ITFSDEVNAILLLTSLPESWETMKTAVSNSLGD 124
RL LS +VA V E T +K I F DE+ A+++L SLP SWE M+ AVSNS G
Sbjct: 64 RLTLSRSVAHNVVKEKTTADLMKALSEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGK 123
Query: 125 KSLKFTEICDAATAEEIRRKESGKESTSSSASGSALAVQ---RGKEKVEYDDRQH-RNSR 184
+ LK+ +I D AEEIRR+++G+ +S SGSAL ++ RG + R + RNS
Sbjct: 124 EKLKYNDIRDLILAEEIRRRDAGE----TSGSGSALNLETRGRGNNRNSNQGRSNSRNSN 183
Query: 185 KN-----GNGEIECYYCHKKGHYKRHCRKLKEDLKKLDANANAV---VHDALVCVESNTM 244
+N +++C+ C K GH+KR C+ K+ K D +ANAV V DAL+ + +
Sbjct: 184 RNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKK--KNEDDSANAVTEEVQDALLLAVDSPL 243
Query: 245 SVDQSPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGRLSKTRGIGNISLKTDSGT 304
+W++DS AS H + R + ++ A ++G V + +G G+G++ + +G+
Sbjct: 244 D-----DWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGS 303
Query: 305 ELVLRDVRYVPSIRMNLISAGKLDDDGYRSEFAGNMWKLTRGSELVVVGHRTSTVY 344
+L VR++P +R NLIS G+LDD+G+ F G WK+T+G+ ++ G +T T+Y
Sbjct: 304 VWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLY 348
BLAST of Moc05g09520 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 172.6 bits (436), Expect = 1.1e-41
Identity = 124/406 (30.54%), Postives = 196/406 (48.28%), Query Frame = 0
Query: 12 IMRFDGAN-FGYWKMQIKDYLTCKKVHKAL---KERPAGMKLEDWEDMDEQAVAIIRLCL 71
+ +F+G N F W+ +++D L + +HK L ++P MK EDW D+DE+A + IRL L
Sbjct: 8 VAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHL 67
Query: 72 SMNVASLVANETTA---------------------------------------------- 131
S +V + + +E TA
Sbjct: 68 SDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNG 127
Query: 132 ----IASLKITFSDEVNAILLLTSLPESWETMKTAVSNSLGDKSLKFTEICDAATAEEIR 191
+A+L + +E AILLL SLP S++ + T + + G +++ ++ A E
Sbjct: 128 LITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILH--GKTTIELKDVTSALLLNEKM 187
Query: 192 RKESGKESTSSSASGSALAVQRGKEKVEYDDRQHRNSRKNGNGEIECYYCHKKGHYKRHC 251
RK+ + + G + QR + ++ ++ + CY C++ GH+KR C
Sbjct: 188 RKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDC 247
Query: 252 ---RKLKEDL--KKLDANANAVVHD-----ALVCVESNTMSVD-QSPEWIVDSVASVHIS 311
RK K + +K D N A+V + + E M + EW+VD+ AS H +
Sbjct: 248 PNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHAT 307
Query: 312 SDRRLFTSFTAENYGMVRMGNGRLSKTRGIGNISLKTDSGTELVLRDVRYVPSIRMNLIS 353
R LF + A ++G V+MGN SK GIG+I +KT+ G LVL+DVR+VP +RMNLIS
Sbjct: 308 PVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLIS 367
BLAST of Moc05g09520 vs. ExPASy TrEMBL
Match:
A0A4U5QVL9 (CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000036030 PE=4 SV=1)
HSP 1 Score: 232.3 bits (591), Expect = 4.3e-57
Identity = 142/372 (38.17%), Postives = 212/372 (56.99%), Query Frame = 0
Query: 11 GIMRFDGANFGYWKMQIKDYLTCKKVH-KALKERPAGMKLEDWEDMDEQAVAIIRLCLSM 70
GI +FDG +FGYWKMQI+DYL KK+H L +P M+ E+W+ +D Q + II+L LS
Sbjct: 9 GIEKFDGTDFGYWKMQIEDYLYGKKLHLPLLGSKPEKMEAEEWQLLDRQVLGIIQLSLSR 68
Query: 71 NVASLVANE-----------------------TTAIASLKITFSDEVNAILLLTSLPESW 130
VA V E T ++S++I F DE+ A++LL SLP SW
Sbjct: 69 RVAHNVTKEKSTAKLMEALSGMYEKLSANNTITNQLSSVEIEFDDEIRALILLASLPSSW 128
Query: 131 ETMKTAVSNSLGDKSLKFTEICDAATAEEIRRKESGKESTSSSASGSALAV--------- 190
E M+TAVSNS G LK+ +I D AEE+RRK+SG+ SS+SGSAL +
Sbjct: 129 EGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRGRRQDR 188
Query: 191 --QRGKEKVEYDDRQHRNSRKNGNGEIECYYCHKKGHYKRHCRKLKEDLKKLDANANAV- 250
RG+ K Y + SRK ++EC+ C K GH+ R+C K K+ K D+ +
Sbjct: 189 GSSRGRSKSRYRSKSKFGSRK----QVECWNCGKPGHFSRNCTKPKK--PKADSTNATID 248
Query: 251 -VHDALVCVESNTMSVDQSPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGRLSKT 310
V DA++ V + Q EWI+DS AS H + + ++ ++G+V + +G
Sbjct: 249 EVQDAIILVVQS-----QIDEWILDSGASFHCTPHNEMLQNYVGGDHGVVYLADGTPLNI 308
Query: 311 RGIGNISLKTDSGTELVLRDVRYVPSIRMNLISAGKLDDDGYRSEFAGNMWKLTRGSELV 346
GIG++ +KT +G+ L++VR+VP ++ LIS G+LDD G+ FAG MWK+++G+ ++
Sbjct: 309 VGIGDVQIKTMNGSIWTLQNVRHVPELKKKLISVGQLDDSGHSILFAGGMWKVSKGAMVL 365
BLAST of Moc05g09520 vs. ExPASy TrEMBL
Match:
A5BPB3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034935 PE=4 SV=1)
HSP 1 Score: 230.7 bits (587), Expect = 1.3e-56
Identity = 136/356 (38.20%), Postives = 209/356 (58.71%), Query Frame = 0
Query: 5 EQSSFEGIMRFDGANFGYWKMQIKDYLTCKKVH-KALKERPAGMKLEDWEDMDEQAVAII 64
E GI +FDG +F YW+MQI+DYL +K+H L +P MK E+W +D Q + +I
Sbjct: 4 EAGKASGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVI 63
Query: 65 RLCLSMNVASLVANETTAIASLK----ITFSDEVNAILLLTSLPESWETMKTAVSNSLGD 124
RL LS +VA V E T +K I F DE+ A+++L SLP SWE M+ AVSNS G
Sbjct: 64 RLTLSRSVAHNVVKEKTTADLMKALSEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGK 123
Query: 125 KSLKFTEICDAATAEEIRRKESGKESTSSSASGSALAVQ---RGKEKVEYDDRQH-RNSR 184
+ LK+ +I D AEEIRR+++G+ +S SGSAL ++ RG + R + RNS
Sbjct: 124 EKLKYNDIRDLILAEEIRRRDAGE----TSGSGSALNLETRGRGNNRNSNQGRSNSRNSN 183
Query: 185 KN-----GNGEIECYYCHKKGHYKRHCRKLKEDLKKLDANANAV---VHDALVCVESNTM 244
+N +++C+ C K GH+KR C+ K+ K D +ANAV V DAL+ + +
Sbjct: 184 RNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKK--KNEDDSANAVTEEVQDALLLAVDSPL 243
Query: 245 SVDQSPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGRLSKTRGIGNISLKTDSGT 304
+W++DS AS H + R + ++ A ++G V + +G G+G++ + +G+
Sbjct: 244 D-----DWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGS 303
Query: 305 ELVLRDVRYVPSIRMNLISAGKLDDDGYRSEFAGNMWKLTRGSELVVVGHRTSTVY 344
+L VR++P +R NLIS G+LDD+G+ F G WK+T+G+ ++ G +T T+Y
Sbjct: 304 VWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLY 348
BLAST of Moc05g09520 vs. ExPASy TrEMBL
Match:
A0A438JHN2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3131 PE=4 SV=1)
HSP 1 Score: 230.7 bits (587), Expect = 1.3e-56
Identity = 137/356 (38.48%), Postives = 208/356 (58.43%), Query Frame = 0
Query: 5 EQSSFEGIMRFDGANFGYWKMQIKDYLTCKKVH-KALKERPAGMKLEDWEDMDEQAVAII 64
E GI +FDG +F YW+MQI+DYL +K+H L +P MK E+W D Q + +I
Sbjct: 4 EAGKASGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWVLFDRQVLGVI 63
Query: 65 RLCLSMNVASLVANETTAIASLK----ITFSDEVNAILLLTSLPESWETMKTAVSNSLGD 124
RL LS +VA V E T +K I F DE+ A+++L SLP SWE M+ AVSNS G
Sbjct: 64 RLTLSRSVAHNVVKEKTTADLMKALSEIDFDDEIRALIVLASLPNSWEAMRMAVSNSTGK 123
Query: 125 KSLKFTEICDAATAEEIRRKESGKESTSSSASGSALAVQ---RGKEKVEYDDRQH-RNSR 184
+ LK+ +I D AEEIRR+++G+ +S SGSAL ++ RG + R + RNS
Sbjct: 124 EKLKYNDIRDLILAEEIRRRDAGE----TSGSGSALNLETRGRGNNRNSNQGRSNSRNSN 183
Query: 185 KN-----GNGEIECYYCHKKGHYKRHCRKLKEDLKKLDANANAV---VHDALVCVESNTM 244
+N +++C+ C K GH+KR C+ K+ K D +ANAV V DAL+ + +
Sbjct: 184 RNISKSRSGQQVQCWNCGKTGHFKRQCKSPKK--KNEDDSANAVTEEVQDALLLAVDSPL 243
Query: 245 SVDQSPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGRLSKTRGIGNISLKTDSGT 304
+W++DS AS H + R + ++ A ++G V + +G G+G++ + +G
Sbjct: 244 D-----DWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLPNGY 303
Query: 305 ELVLRDVRYVPSIRMNLISAGKLDDDGYRSEFAGNMWKLTRGSELVVVGHRTSTVY 344
+L VR++P +R NLIS G+LDD+GY F G WK+T+G+ ++ G +T+T+Y
Sbjct: 304 VWLLEKVRHIPDLRRNLISVGQLDDEGYAILFVGGTWKVTKGARVLARGKKTNTLY 348
BLAST of Moc05g09520 vs. ExPASy TrEMBL
Match:
A0A438IBT7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_788 PE=4 SV=1)
HSP 1 Score: 229.9 bits (585), Expect = 2.1e-56
Identity = 142/364 (39.01%), Postives = 213/364 (58.52%), Query Frame = 0
Query: 27 IKDYLTCKKVHKALK---ERPAGMKLEDWEDMDEQAVAIIRLCLSMNVASL--------- 86
++D L CK ++ ++ +P GMK ++W+ +D +AV IR ++N A L
Sbjct: 1 MEDLLFCKDLNGPIEGDSGKPEGMKDDEWKKLDRKAVGFIRK-TAVNKAFLFRKLVNSKY 60
Query: 87 ------------VANETTAIASLKITFSDEVNAILLLTSLPESWETMKTAVSNSLGDKSL 146
+ + +A++KITF DE+ A+LLL+SLPESWET+ VSNS D +
Sbjct: 61 KEGTPIAEHLNEIKSIVNQLAAMKITFDDELQALLLLSSLPESWETLVVTVSNSTPDGVV 120
Query: 147 KFTEICDAATAEEIRRKESGKESTSSSASGSALAV---QRGKEKVEYD---DRQHRNSRK 206
+++ + EE RRK SG S+ AL + +RGK K + D+ S
Sbjct: 121 TMSQVTSSLLNEETRRKSSG------SSHSEALVIENRERGKSKSKASHNRDKSRGRSSS 180
Query: 207 NGNGEIECYYCHKKGHYKRHCRKL------KEDLKKLDANANAVVHDALVCVESNTMSVD 266
++ECYYCHKKGH KR CRKL KE + N AVV D + + + +SV+
Sbjct: 181 ISKKDVECYYCHKKGHMKRECRKLKFKEQNKEKNSEKKQNDTAVVTDGELMIIRDDVSVN 240
Query: 267 ---QSPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGRLSKTRGIGNISLKTDSGT 326
Q +W++DS AS H++S FTS++ ++G VRMGN +SK G+G+I L+T++G
Sbjct: 241 LIGQETDWVIDSGASFHVTSRADFFTSYSQGDFGNVRMGNEDVSKIFGMGDICLETNTGC 300
Query: 327 ELVLRDVRYVPSIRMNLISAGKLDDDGYRSEFAGNMWKLTRGSELVVVGHRTSTVYTVRF 352
+L+LRDVR+VP IR+NLISAGKLDD+GY + F+ WKL++GS +V G +T ++YTV+
Sbjct: 301 KLLLRDVRHVPDIRLNLISAGKLDDEGYNNNFSDGKWKLSKGSLVVAKGKKTCSLYTVQA 357
BLAST of Moc05g09520 vs. ExPASy TrEMBL
Match:
A0A438HTJ3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3129 PE=4 SV=1)
HSP 1 Score: 226.5 bits (576), Expect = 2.4e-55
Identity = 136/374 (36.36%), Postives = 212/374 (56.68%), Query Frame = 0
Query: 5 EQSSFEGIMRFDGANFGYWKMQIKDYLTCKKVH-KALKERPAGMKLEDWEDMDEQAVAII 64
E GI +FDG +F YW+MQI+DYL +K+H L +P MK E+W +D Q + +I
Sbjct: 4 EAGKASGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVI 63
Query: 65 RLCLSMNVASLVANE----------------------TTAIASLKITFSDEVNAILLLTS 124
RL LS +VA V E T ++S++I F DE+ A+++L S
Sbjct: 64 RLTLSRSVAHNVVKEKTTADLMKALSVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLAS 123
Query: 125 LPESWETMKTAVSNSLGDKSLKFTEICDAATAEEIRRKESGKESTSSSASGSALAVQ--- 184
LP SWE M+ AVSNS G + LK+ +I D AEEIRR+++G+ +S SGSAL ++
Sbjct: 124 LPNSWEAMRMAVSNSTGKEKLKYNDIRDLILAEEIRRRDAGE----TSGSGSALNLETRG 183
Query: 185 RGKEKVEYDDRQH-RNSRKN-----GNGEIECYYCHKKGHYKRHCRKLKEDLKKLDANAN 244
RG + R + RNS +N +++C+ C K GH+KR C+ K+ K D +AN
Sbjct: 184 RGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKK--KNEDDSAN 243
Query: 245 AV---VHDALVCVESNTMSVDQSPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGR 304
AV V DAL+ + + +W++DS AS H + R + ++ A ++G V + +G
Sbjct: 244 AVTEEVQDALLLAVDSPLD-----DWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGS 303
Query: 305 LSKTRGIGNISLKTDSGTELVLRDVRYVPSIRMNLISAGKLDDDGYRSEFAGNMWKLTRG 344
G+G++ + +G+ +L VR++P +R NLIS G+LDD+G+ F G WK+T+G
Sbjct: 304 ALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKG 363
BLAST of Moc05g09520 vs. TAIR 10
Match:
AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 53.1 bits (126), Expect = 6.9e-07
Identity = 25/74 (33.78%), Postives = 45/74 (60.81%), Query Frame = 0
Query: 14 RFDGANFGYWKMQIKDYLTCKKVHKALKERPAGMKLEDWEDMDEQAVAIIRLCLSMNVAS 73
+ DG ++ + +M+I+DYL KK+H+ L ++ M +DW + Q + +IRL +S N+A
Sbjct: 8 KVDGTSYSFCRMKIEDYLYGKKLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAH 67
Query: 74 LVANETTAIASLKI 88
VA E + +K+
Sbjct: 68 NVAKEKSPDGLMKV 81
BLAST of Moc05g09520 vs. TAIR 10
Match:
AT3G21000.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 45.1 bits (105), Expect = 1.9e-04
Identity = 32/144 (22.22%), Postives = 61/144 (42.36%), Query Frame = 0
Query: 172 RNSRKNGNGEIECYYCHKKGHYKRHCRKLKEDLKKLDANANAVVHDALVCVESNTMSVDQ 231
++ R E C C+K H + C K + K + VV L V +
Sbjct: 218 KDLRLKSKSEKWCGLCYKNNHNQEDC-KFRIHTDKEEKEDEIVVDYRLETVPNLGAKTYD 277
Query: 232 SPEWIVDSVASVHISSDRRLFTSFTAENYGMVRMGNGRLSKTRGIGNISLKTDSGTELVL 291
WI+ +A ++++ + FT+ V +G + G G++ ++ G + +
Sbjct: 278 DDIWIIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTI 337
Query: 292 RDVRYVPSIRMNLISAGKLDDDGY 316
R+V +VP + N++S GK+ Y
Sbjct: 338 RNVIFVPGLNRNVLSFGKMVSKRY 360
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_034902342.1 | 2.3e-57 | 38.73 | LOW QUALITY PROTEIN: uncharacterized protein LOC118039689 [Populus alba] | [more] |
TKS15174.1 | 8.9e-57 | 38.17 | hypothetical protein D5086_0000036030 [Populus alba] | [more] |
KAG5549868.1 | 2.0e-56 | 36.36 | hypothetical protein RHGRI_014986 [Rhododendron griersonianum] | [more] |
RVX08463.1 | 2.6e-56 | 38.48 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
CAN65867.1 | 2.6e-56 | 38.20 | hypothetical protein VITISV_034935 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 1.1e-41 | 30.54 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A4U5QVL9 | 4.3e-57 | 38.17 | CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000036030... | [more] |
A5BPB3 | 1.3e-56 | 38.20 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_034935 PE=4 SV=1 | [more] |
A0A438JHN2 | 1.3e-56 | 38.48 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A438IBT7 | 2.1e-56 | 39.01 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A438HTJ3 | 2.4e-55 | 36.36 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
Match Name | E-value | Identity | Description | |
AT3G29785.1 | 6.9e-07 | 33.78 | unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact... | [more] |
AT3G21000.1 | 1.9e-04 | 22.22 | Gag-Pol-related retrotransposon family protein | [more] |