Moc05g08940 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g08940
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	15-cis-zeta-carotene isomerase, chloroplastic
Location	chr5: 6844750 .. 6846944 (+)
RNA-Seq Expression	Moc05g08940
Synteny	Moc05g08940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTAGCCTCCGCCGCCGCCTCCGCCGCGCCCCTTCTTCACTACCCACTCGCAGCCTCCTCCTCCAACCAACCCCACCGTCGCCATCGCCGCCCGGATGCTATTAGCCTCCGCCACTCTTCAATTTCGATCCCCAATTTCCCTCCGTATCCCCTCAACTGCTCGCCGATTTCCGGACCCCGTCGGCTTGCTACCCGTTTGGGGGATTTTTCTGCCGGCGCTTCCATCGGAGACAGCGATACTGGTGGTTCGACCTCTGTCTCGGACGACGACGGCCTCGTCGGCGAGGACGCTGCGGTTTTTGATCTTTCCAAGCAGAAATTGACGTCGTGGGCTTATTTCACTGTGATTTTGGGGGTTGTTTTGTTCGTGCTCAATGTTGTTTGGATTGATAACTCCGGTGTGGGATTTGGCAAGGCCTTTGTGGACGCTGTTTCTGAACTCTCGGATAGTCATGAGGTTCCCTTCTATTACTTCGATTTCTTTAAATTGTTTCTGGATTGGTATATTTTTTTTTTTACCTGTACAAACAATGCTCATTGTGAATGTGATTCTGTATAACGTTCCCCAAAATGGGAGAGATTATCTTACTCTCAGATAGTTTTTACTGGTTGGTTTTGGTTGAAGCGATTGGATGTCTATAGCTAGTGGTTGGGCTTCCAATTTCATTCCTAATCTGAAGTTTTAGCTTCGTTTCTTTCAAGAAATCCTTCCTGTTAGTGAACTTAAAATCAATGATAGATGTTGAAATTTGAAAATTGTGTTCATTAGTACCATTTTAAATGGGTTTGTTTTCTAATTTTGGGCCATGTGAATTAAATAGATTTGTCAATTTTATGGTAGGCATGTCTAGCTCGGGATAGTTTCTACTGGATTAATGAAAGGAATTTTGAAGTTTAGTGAACTTAATATGTAAAGGGTGGAATTCAAACTTTAAAAGATTATGGACGAAAAATCTTACATGTCTTTGGCTTCTGAATTATGAATGACTGGGAGGATGAACTTAGCATTTGGTTTATATTGTGCATGGCCTTGCTAAATTCCTGAGTCTCACTTGGTTAACATGAATCCAAGTCTTGACTCTTGAAACTTTCTTCTGCAGGTTGTGATGTTGATGCTCATTTCCATTTTTGCCATTGCCCACAGTGGTTTGGCCACTCTTAGAGACCAAGGCGAGAAGCTTGTCGGTGAACGAGCTTTTCGGGTTCTGTTTGCAGGAATTTCTCTACCTTTGGCTGTCAGCACTGTGGTAGGATACCTTCCCTCTTCTTTTCCATTTAACTTGATGATGAAGTTATCTTAATATATATTGTTCCTTAAAAAATTCTGGATGCACACCCATATTGACTTGTTTACGCTAAGGAGTTGAATTCAGGTGTATTTCATTAACCATCGATACGACGGAGTACAATTATGGCAGCTCCAAAGTGTTCCCGGAGTGCATCAGCTCGTGTGGTTCAGTTCATTTATCTCCTTCTTCTTCCTCTATCCTTCAACTTTTAATTTGCTAGAGGTTGCAGCTGTTGATAAACCGAAAATGCACCTTTGGGAAACCGGCATCATTAGAATAACTAGGCATCCACAGGTATGTTTATATTTCCTTAACTTGAACATTCATTACATTTCATTACAATTTCGGGGTTTCATTGCCGTTAATTTGGCTGATAAACAAGGCTTAGGCTCAAATCTCGAACTAGAATTGGTGGCTTCGGCTTGAATCCATTGATAAACTAGAGTTGTCTCATGTTACTTTACTGCATCAAGAATTTTCAATGAACTTTCATACTTTTTATTTTAGTCCCAAAACTTTCAAAAGTTAAAAAGGCTTCTCAGCAAATCTCGGTTTCTCTTCAAAGATGGTTGGGCAGGTGATGTGGTGCTTGGCTCATACCATCTGGATAGGGAACTCTGTTGCAGTGGCAGCTTCCATTGGCTTGATAGGACATCATCTGTTCGGGGTATGGAACGGAGACAGGAGGCTAGCAAAGCGATACGGGGCAGATTTTGAAGCCGTGAAAAGGCGAACGAGCGTCATCCCGTTCGCTGCCATTGTGGACGGGCGTCAAAAGTTGCCCGACGATTATTACAAGGAGTTCATTCGGTTGCCATATTTGTCAATAACTGCACTGACAATGGGTGCGTACCTTGCTCACCCCCTTATGCAAGCTGCAAGTTTCAGGCTTCATTGGTAA

mRNA sequence

ATGGCGGTAGCCTCCGCCGCCGCCTCCGCCGCGCCCCTTCTTCACTACCCACTCGCAGCCTCCTCCTCCAACCAACCCCACCGTCGCCATCGCCGCCCGGATGCTATTAGCCTCCGCCACTCTTCAATTTCGATCCCCAATTTCCCTCCGTATCCCCTCAACTGCTCGCCGATTTCCGGACCCCGTCGGCTTGCTACCCGTTTGGGGGATTTTTCTGCCGGCGCTTCCATCGGAGACAGCGATACTGGTGGTTCGACCTCTGTCTCGGACGACGACGGCCTCGTCGGCGAGGACGCTGCGGTTTTTGATCTTTCCAAGCAGAAATTGACGTCGTGGGCTTATTTCACTGTGATTTTGGGGGTTGTTTTGTTCGTGCTCAATGTTGTTTGGATTGATAACTCCGGTGTGGGATTTGGCAAGGCCTTTGTGGACGCTGTTTCTGAACTCTCGGATAGTCATGAGGTTGTGATGTTGATGCTCATTTCCATTTTTGCCATTGCCCACAGTGGTTTGGCCACTCTTAGAGACCAAGGCGAGAAGCTTGTCGGTGAACGAGCTTTTCGGGTTCTGTTTGCAGGAATTTCTCTACCTTTGGCTGTCAGCACTGTGGTGTATTTCATTAACCATCGATACGACGGAGTACAATTATGGCAGCTCCAAAGTGTTCCCGGAGTGCATCAGCTCGTGTGGTTCAGTTCATTTATCTCCTTCTTCTTCCTCTATCCTTCAACTTTTAATTTGCTAGAGGTTGCAGCTGTTGATAAACCGAAAATGCACCTTTGGGAAACCGGCATCATTAGAATAACTAGGCATCCACAGATGGTTGGGCAGGTGATGTGGTGCTTGGCTCATACCATCTGGATAGGGAACTCTGTTGCAGTGGCAGCTTCCATTGGCTTGATAGGACATCATCTGTTCGGGGTATGGAACGGAGACAGGAGGCTAGCAAAGCGATACGGGGCAGATTTTGAAGCCGTGAAAAGGCGAACGAGCGTCATCCCGTTCGCTGCCATTGTGGACGGGCGTCAAAAGTTGCCCGACGATTATTACAAGGAGTTCATTCGGTTGCCATATTTGTCAATAACTGCACTGACAATGGGTGCGTACCTTGCTCACCCCCTTATGCAAGCTGCAAGTTTCAGGCTTCATTGGTAA

Coding sequence (CDS)

ATGGCGGTAGCCTCCGCCGCCGCCTCCGCCGCGCCCCTTCTTCACTACCCACTCGCAGCCTCCTCCTCCAACCAACCCCACCGTCGCCATCGCCGCCCGGATGCTATTAGCCTCCGCCACTCTTCAATTTCGATCCCCAATTTCCCTCCGTATCCCCTCAACTGCTCGCCGATTTCCGGACCCCGTCGGCTTGCTACCCGTTTGGGGGATTTTTCTGCCGGCGCTTCCATCGGAGACAGCGATACTGGTGGTTCGACCTCTGTCTCGGACGACGACGGCCTCGTCGGCGAGGACGCTGCGGTTTTTGATCTTTCCAAGCAGAAATTGACGTCGTGGGCTTATTTCACTGTGATTTTGGGGGTTGTTTTGTTCGTGCTCAATGTTGTTTGGATTGATAACTCCGGTGTGGGATTTGGCAAGGCCTTTGTGGACGCTGTTTCTGAACTCTCGGATAGTCATGAGGTTGTGATGTTGATGCTCATTTCCATTTTTGCCATTGCCCACAGTGGTTTGGCCACTCTTAGAGACCAAGGCGAGAAGCTTGTCGGTGAACGAGCTTTTCGGGTTCTGTTTGCAGGAATTTCTCTACCTTTGGCTGTCAGCACTGTGGTGTATTTCATTAACCATCGATACGACGGAGTACAATTATGGCAGCTCCAAAGTGTTCCCGGAGTGCATCAGCTCGTGTGGTTCAGTTCATTTATCTCCTTCTTCTTCCTCTATCCTTCAACTTTTAATTTGCTAGAGGTTGCAGCTGTTGATAAACCGAAAATGCACCTTTGGGAAACCGGCATCATTAGAATAACTAGGCATCCACAGATGGTTGGGCAGGTGATGTGGTGCTTGGCTCATACCATCTGGATAGGGAACTCTGTTGCAGTGGCAGCTTCCATTGGCTTGATAGGACATCATCTGTTCGGGGTATGGAACGGAGACAGGAGGCTAGCAAAGCGATACGGGGCAGATTTTGAAGCCGTGAAAAGGCGAACGAGCGTCATCCCGTTCGCTGCCATTGTGGACGGGCGTCAAAAGTTGCCCGACGATTATTACAAGGAGTTCATTCGGTTGCCATATTTGTCAATAACTGCACTGACAATGGGTGCGTACCTTGCTCACCCCCTTATGCAAGCTGCAAGTTTCAGGCTTCATTGGTAA

Protein sequence

MAVASAAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFPPYPLNCSPISGPRRLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILGVVLFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEKLVGERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFLYPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLSITALTMGAYLAHPLMQAASFRLHW

Homology

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BLAST of Moc05g08940 vs. NCBI nr
Match: XP_022145219.1 (15-cis-zeta-carotene isomerase, chloroplastic [Momordica charantia])

HSP 1 Score: 759.2 bits (1959), Expect = 1.7e-215
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MAVASAAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFPPYPLNCSPISG 60
           MAVASAAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFPPYPLNCSPISG
Sbjct: 1   MAVASAAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFPPYPLNCSPISG 60

Query: 61  PRRLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILG 120
           PRRLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILG
Sbjct: 61  PRRLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILG 120

Query: 121 VVLFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEK 180
           VVLFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEK
Sbjct: 121 VVLFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEK 180

Query: 181 LVGERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFL 240
           LVGERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFL
Sbjct: 181 LVGERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFL 240

Query: 241 YPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGL 300
           YPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGL
Sbjct: 241 YPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGL 300

Query: 301 IGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLS 360
           IGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLS
Sbjct: 301 IGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLS 360

Query: 361 ITALTMGAYLAHPLMQAASFRLHW 385
           ITALTMGAYLAHPLMQAASFRLHW
Sbjct: 361 ITALTMGAYLAHPLMQAASFRLHW 384

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BLAST of Moc05g08940 vs. NCBI nr
Match: XP_022972107.1 (15-cis-zeta-carotene isomerase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 625.5 bits (1612), Expect = 2.9e-175
Identity = 322/382 (84.29%), Postives = 340/382 (89.01%), Query Frame = 0


Query: 6   AAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFPP---YPLNCSPISGPR 65
           A ASA  L   P   +SSNQPH RHRRPDA +LR SSIS PNF P   + LN SPI   R
Sbjct: 2   AVASATTLFFSPF-PTSSNQPHHRHRRPDAFTLRPSSISTPNFLPQLSFSLNSSPIPRRR 61

Query: 66  RLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILGVV 125
           R       FSA ASIGDS++GGSTS SDDDGLVGEDAAVF+LS+QKL SW YFTVILGVV
Sbjct: 62  R-------FSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWVYFTVILGVV 121

Query: 126 LFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEKLV 185
           LFVLNVVWIDNS  G GKAFVDAVS LSDSHEVVML LI IFA+ HSGLA+LRDQGEKLV
Sbjct: 122 LFVLNVVWIDNSAGGVGKAFVDAVSGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLV 181

Query: 186 GERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFLYP 245
           GERAFRVLFAG+SLPLAVSTVVYFINHRYDGVQLWQL S+PG+HQLVW SSFISFFFLYP
Sbjct: 182 GERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYP 241

Query: 246 STFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIG 305
           STFNLLEVAAVDKPKMHLWETGI+RITRHPQMVGQV+WCLAHT+WIGNSVAVAASIGLIG
Sbjct: 242 STFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIG 301

Query: 306 HHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLSIT 365
           HHLFGVWNGDRRLAKRYGADFEAVKRRTSV+PFAAI+DGRQKLPDDYYKEFIRLPYLSIT
Sbjct: 302 HHLFGVWNGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSIT 361

Query: 366 ALTMGAYLAHPLMQAASFRLHW 385
           ALT+GAYLAHPLMQAASFRLHW
Sbjct: 362 ALTIGAYLAHPLMQAASFRLHW 375

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BLAST of Moc05g08940 vs. NCBI nr
Match: XP_022932715.1 (15-cis-zeta-carotene isomerase, chloroplastic [Cucurbita moschata] >KAG6597644.1 15-cis-zeta-carotene isomerase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 624.4 bits (1609), Expect = 6.5e-175
Identity = 323/387 (83.46%), Postives = 343/387 (88.63%), Query Frame = 0


Query: 1   MAVASAAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNF---PPYPLNCSP 60
           MAVASA       L +P   +SSNQPH RHRR DA +LR SSIS PNF    P+ LN SP
Sbjct: 1   MAVASATT-----LFFPPLPTSSNQPHHRHRRLDAFTLRPSSISTPNFLPQLPFSLNSSP 60

Query: 61  ISGPRRLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTV 120
           I   RR       FSA ASIGDS++GGSTS SDDDGLVGEDAAVF+LS+QKL SWAYFTV
Sbjct: 61  IPRRRR-------FSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTV 120

Query: 121 ILGVVLFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQ 180
           ILGVVLFVLNVVWIDNS  G GKAFVDA+S LSDSHEVVML LI IFA+ HSGLA+LRDQ
Sbjct: 121 ILGVVLFVLNVVWIDNSAGGVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQ 180

Query: 181 GEKLVGERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISF 240
           GEKLVGERAFRVLFAG+SLPLAVSTVVYFINHRYDGVQLWQL S+PG+HQLVW SSFISF
Sbjct: 181 GEKLVGERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISF 240

Query: 241 FFLYPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAAS 300
           FFLYPSTFNLLEVAAVDKPKMHLWETGI+RITRHPQMVGQV+WCLAHT+WIGNSVAVAAS
Sbjct: 241 FFLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAAS 300

Query: 301 IGLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLP 360
           IGLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSV+PFAAI+DGRQKLPDDYYKEFIRLP
Sbjct: 301 IGLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLP 360

Query: 361 YLSITALTMGAYLAHPLMQAASFRLHW 385
           YLSITALT+GAYLAHPLMQAASFRLHW
Sbjct: 361 YLSITALTIGAYLAHPLMQAASFRLHW 375

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BLAST of Moc05g08940 vs. NCBI nr
Match: XP_023540701.1 (15-cis-zeta-carotene isomerase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 619.8 bits (1597), Expect = 1.6e-173
Identity = 324/389 (83.29%), Postives = 342/389 (87.92%), Query Frame = 0


Query: 1   MAVASAAASAAPLLHYPLAASSSNQPH--RRHRRPDAISLRHSSISIPNF---PPYPLNC 60
           MAVASA       L +P   S SNQPH   RHRRPDA++LR SSIS PN     P+ LN 
Sbjct: 1   MAVASATT-----LFFPPFPSPSNQPHHRHRHRRPDALTLRPSSISTPNVLPQLPFSLNS 60

Query: 61  SPISGPRRLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYF 120
           SPI   RR       FSA ASIGDS++GGSTS SDDDGLVGEDAAVF+LS QKL SWAYF
Sbjct: 61  SPIPRRRR-------FSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSDQKLASWAYF 120

Query: 121 TVILGVVLFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLR 180
           TVILGVVLFVLNVVWIDNS  G GKAFVDAVS LSDSHEVVML LI IFA+ HSGLA+LR
Sbjct: 121 TVILGVVLFVLNVVWIDNSAGGVGKAFVDAVSGLSDSHEVVMLALIFIFAVVHSGLASLR 180

Query: 181 DQGEKLVGERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFI 240
           DQGEKLVGERAFRVLFAG+SLPLAVSTVVYFINHRYDGVQLWQL S+PG+HQLVW SSFI
Sbjct: 181 DQGEKLVGERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFI 240

Query: 241 SFFFLYPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVA 300
           SFFFLYPSTFNLLEVAAVDKPKMHLWETGI+RITRHPQMVGQV+WCLAHT+WIGNSVAVA
Sbjct: 241 SFFFLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVA 300

Query: 301 ASIGLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIR 360
           ASIGLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSV+PFAAI+DGRQKLPDDYYKEFIR
Sbjct: 301 ASIGLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIR 360

Query: 361 LPYLSITALTMGAYLAHPLMQAASFRLHW 385
           LPYLSITALT+GAYLAHPLMQAASFRLHW
Sbjct: 361 LPYLSITALTIGAYLAHPLMQAASFRLHW 377

[Close]

BLAST of Moc05g08940 vs. NCBI nr
Match: XP_038882546.1 (15-cis-zeta-carotene isomerase, chloroplastic [Benincasa hispida])

HSP 1 Score: 610.9 bits (1574), Expect = 7.5e-171
Identity = 316/382 (82.72%), Postives = 333/382 (87.17%), Query Frame = 0


Query: 6   AAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFP---PYPLNCSPISGPR 65
           A ASA P    P  +S      RRHRRPDA +LR  SIS PN P   P+  N +PIS   
Sbjct: 2   AVASATPPFSPPFLSS------RRHRRPDATTLRPFSISTPNCPLQLPFSFNSTPIS--- 61

Query: 66  RLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILGVV 125
               R   F+A ASIGDS++GGSTSVSDD G VGEDAA FDLS QKLTSW YFTVILGVV
Sbjct: 62  ----RRPRFAAEASIGDSESGGSTSVSDDGGFVGEDAAAFDLSDQKLTSWVYFTVILGVV 121

Query: 126 LFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEKLV 185
           LFVLNVVWIDNS  G GKAFVDAVS +SDSHEVVML+L  IFAI HSGLA+LRDQGEKLV
Sbjct: 122 LFVLNVVWIDNSAGGVGKAFVDAVSGISDSHEVVMLLLTFIFAIVHSGLASLRDQGEKLV 181

Query: 186 GERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFLYP 245
           GERAFRVLFAG+SLPLAVSTVVYFINHRYDGVQLWQLQSVPG+HQLVW SSF+SFFFLYP
Sbjct: 182 GERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLQSVPGLHQLVWLSSFVSFFFLYP 241

Query: 246 STFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIG 305
           STFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIG
Sbjct: 242 STFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIG 301

Query: 306 HHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLSIT 365
           HHLFGVWNGDRRLAKRYGADFEAVKRRTS++PFAAIVDGRQKLPDDYYKEF+RLPYLSIT
Sbjct: 302 HHLFGVWNGDRRLAKRYGADFEAVKRRTSIVPFAAIVDGRQKLPDDYYKEFVRLPYLSIT 361

Query: 366 ALTMGAYLAHPLMQAASFRLHW 385
           ALT+GAYLAHPLMQAASFRLHW
Sbjct: 362 ALTIGAYLAHPLMQAASFRLHW 370

[Close]

BLAST of Moc05g08940 vs. ExPASy Swiss-Prot
Match: Q9SAC0 (15-cis-zeta-carotene isomerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=Z-ISO PE=1 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.6e-139
Identity = 236/300 (78.67%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 85  STSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILGVVLFVLNVVWIDNSGVGFGKAFVD 144
           S S S    L+GED+A F+L KQKL SW YF V+LGVVLF+LNVVWIDNS  GFGK+F+D
Sbjct: 69  SDSESSPTLLIGEDSAAFELGKQKLVSWVYFGVVLGVVLFILNVVWIDNS-TGFGKSFID 128

Query: 145 AVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEKLVGERAFRVLFAGISLPLAVSTVV 204
           AVS +S S EV MLMLI IFAI HSGLA+LRD GEKL+GERAFRVLFAGISLPLA+ST+V
Sbjct: 129 AVSNISGSPEVAMLMLILIFAIVHSGLASLRDIGEKLIGERAFRVLFAGISLPLAMSTIV 188

Query: 205 YFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFLYPSTFNLLEVAAVDKPKMHLWETG 264
           YFINHRYDG QLWQLQ VPGVH+ +W ++F+SFFFLYPSTFNLLEVAAVDKPKMHLWETG
Sbjct: 189 YFINHRYDGSQLWQLQGVPGVHEAIWVANFVSFFFLYPSTFNLLEVAAVDKPKMHLWETG 248

Query: 265 IIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFE 324
           I+RITRHPQMVGQ++WCLAHT+WIGN+VA +AS+GLI HHLFG WNGDRRLAKRYG DFE
Sbjct: 249 IMRITRHPQMVGQIVWCLAHTLWIGNTVAASASLGLIAHHLFGAWNGDRRLAKRYGEDFE 308

Query: 325 AVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLSITALTMGAYLAHPLMQAASFRLHW 384
           ++K+RTSVIPFAAI +GRQ LP+DYYKEF+RLPYL+ITALT+GAY AHPLMQ ASFRLHW
Sbjct: 309 SIKKRTSVIPFAAIFEGRQVLPEDYYKEFVRLPYLAITALTVGAYFAHPLMQGASFRLHW 367

[Close]

BLAST of Moc05g08940 vs. ExPASy Swiss-Prot
Match: B4FHU1 (15-cis-zeta-carotene isomerase, chloroplastic OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 2.5e-129
Identity = 235/374 (62.83%), Postives = 279/374 (74.60%), Query Frame = 0


Query: 11  APLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFPPYPLNCSPISGPRRLATRLGD 70
           A  L   LAA+    PHRR      +    + I  P  PP     S     R +   +  
Sbjct: 2   ASQLRLHLAATPPLLPHRRPHLARPLCPTLNPIRAP-LPPLSRVLSHARPARAVGGGIEP 61

Query: 71  FSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILGVVLFVLNVVW 130
                + GD   GG         LVGED+A F+L  Q + SWAYF  ILG VL  LNV+W
Sbjct: 62  KEGVVAEGDESGGGPV-------LVGEDSAAFELKDQSVASWAYFAGILGAVLVALNVLW 121

Query: 131 IDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEKLVGERAFRVL 190
           ID S  G G  F+DAV+ +SDSHEVVML+L  IFA+ HSG+A+LR+ GEK+VGER +RVL
Sbjct: 122 IDPS-TGVGTKFLDAVASVSDSHEVVMLLLTIIFAVVHSGMASLRESGEKIVGERVYRVL 181

Query: 191 FAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFLYPSTFNLLEV 250
           FAGISLPLAV+T+VYFINHRYDG QLWQ+Q + G+H+L+WFSSFISFFFLYPSTFNLLEV
Sbjct: 182 FAGISLPLAVTTIVYFINHRYDGTQLWQVQGITGIHELLWFSSFISFFFLYPSTFNLLEV 241

Query: 251 AAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIGHHLFGVWN 310
           AAVDKPK+H+WETGI+RITRHPQMVGQV+WCLAHT+WIGNSVAVAAS+GLI HHLFG WN
Sbjct: 242 AAVDKPKLHMWETGIMRITRHPQMVGQVIWCLAHTLWIGNSVAVAASVGLISHHLFGAWN 301

Query: 311 GDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLSITALTMGAYL 370
           GDRRL  RYG  FE +K+RTSV+PFAAI+DGRQKLP DY+KEF RLPY++IT LT+GAY 
Sbjct: 302 GDRRLLSRYGEAFEVLKKRTSVMPFAAIIDGRQKLPKDYHKEFFRLPYVAITMLTLGAYF 361

Query: 371 AHPLMQAASFRLHW 385
           AHPLMQA+S++L W
Sbjct: 362 AHPLMQASSYQLPW 366

[Close]

BLAST of Moc05g08940 vs. ExPASy TrEMBL
Match: A0A6J1CUK6 (15-cis-zeta-carotene isomerase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014723 PE=4 SV=1)

HSP 1 Score: 759.2 bits (1959), Expect = 8.2e-216
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0


Query: 1   MAVASAAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFPPYPLNCSPISG 60
           MAVASAAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFPPYPLNCSPISG
Sbjct: 1   MAVASAAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFPPYPLNCSPISG 60

Query: 61  PRRLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILG 120
           PRRLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILG
Sbjct: 61  PRRLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILG 120

Query: 121 VVLFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEK 180
           VVLFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEK
Sbjct: 121 VVLFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEK 180

Query: 181 LVGERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFL 240
           LVGERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFL
Sbjct: 181 LVGERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFL 240

Query: 241 YPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGL 300
           YPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGL
Sbjct: 241 YPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGL 300

Query: 301 IGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLS 360
           IGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLS
Sbjct: 301 IGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLS 360

Query: 361 ITALTMGAYLAHPLMQAASFRLHW 385
           ITALTMGAYLAHPLMQAASFRLHW
Sbjct: 361 ITALTMGAYLAHPLMQAASFRLHW 384

[Close]

BLAST of Moc05g08940 vs. ExPASy TrEMBL
Match: A0A6J1I3V9 (15-cis-zeta-carotene isomerase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470740 PE=4 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 1.4e-175
Identity = 322/382 (84.29%), Postives = 340/382 (89.01%), Query Frame = 0


Query: 6   AAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNFPP---YPLNCSPISGPR 65
           A ASA  L   P   +SSNQPH RHRRPDA +LR SSIS PNF P   + LN SPI   R
Sbjct: 2   AVASATTLFFSPF-PTSSNQPHHRHRRPDAFTLRPSSISTPNFLPQLSFSLNSSPIPRRR 61

Query: 66  RLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILGVV 125
           R       FSA ASIGDS++GGSTS SDDDGLVGEDAAVF+LS+QKL SW YFTVILGVV
Sbjct: 62  R-------FSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWVYFTVILGVV 121

Query: 126 LFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEKLV 185
           LFVLNVVWIDNS  G GKAFVDAVS LSDSHEVVML LI IFA+ HSGLA+LRDQGEKLV
Sbjct: 122 LFVLNVVWIDNSAGGVGKAFVDAVSGLSDSHEVVMLALIFIFAVVHSGLASLRDQGEKLV 181

Query: 186 GERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFLYP 245
           GERAFRVLFAG+SLPLAVSTVVYFINHRYDGVQLWQL S+PG+HQLVW SSFISFFFLYP
Sbjct: 182 GERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISFFFLYP 241

Query: 246 STFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIG 305
           STFNLLEVAAVDKPKMHLWETGI+RITRHPQMVGQV+WCLAHT+WIGNSVAVAASIGLIG
Sbjct: 242 STFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAASIGLIG 301

Query: 306 HHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLSIT 365
           HHLFGVWNGDRRLAKRYGADFEAVKRRTSV+PFAAI+DGRQKLPDDYYKEFIRLPYLSIT
Sbjct: 302 HHLFGVWNGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLPYLSIT 361

Query: 366 ALTMGAYLAHPLMQAASFRLHW 385
           ALT+GAYLAHPLMQAASFRLHW
Sbjct: 362 ALTIGAYLAHPLMQAASFRLHW 375

[Close]

BLAST of Moc05g08940 vs. ExPASy TrEMBL
Match: A0A6J1F2X1 (15-cis-zeta-carotene isomerase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439180 PE=4 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 3.2e-175
Identity = 323/387 (83.46%), Postives = 343/387 (88.63%), Query Frame = 0


Query: 1   MAVASAAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNF---PPYPLNCSP 60
           MAVASA       L +P   +SSNQPH RHRR DA +LR SSIS PNF    P+ LN SP
Sbjct: 1   MAVASATT-----LFFPPLPTSSNQPHHRHRRLDAFTLRPSSISTPNFLPQLPFSLNSSP 60

Query: 61  ISGPRRLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTV 120
           I   RR       FSA ASIGDS++GGSTS SDDDGLVGEDAAVF+LS+QKL SWAYFTV
Sbjct: 61  IPRRRR-------FSAEASIGDSESGGSTSTSDDDGLVGEDAAVFNLSEQKLASWAYFTV 120

Query: 121 ILGVVLFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQ 180
           ILGVVLFVLNVVWIDNS  G GKAFVDA+S LSDSHEVVML LI IFA+ HSGLA+LRDQ
Sbjct: 121 ILGVVLFVLNVVWIDNSAGGVGKAFVDAISGLSDSHEVVMLALIFIFAVVHSGLASLRDQ 180

Query: 181 GEKLVGERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISF 240
           GEKLVGERAFRVLFAG+SLPLAVSTVVYFINHRYDGVQLWQL S+PG+HQLVW SSFISF
Sbjct: 181 GEKLVGERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLHSIPGLHQLVWLSSFISF 240

Query: 241 FFLYPSTFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAAS 300
           FFLYPSTFNLLEVAAVDKPKMHLWETGI+RITRHPQMVGQV+WCLAHT+WIGNSVAVAAS
Sbjct: 241 FFLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVIWCLAHTVWIGNSVAVAAS 300

Query: 301 IGLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLP 360
           IGLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSV+PFAAI+DGRQKLPDDYYKEFIRLP
Sbjct: 301 IGLIGHHLFGVWNGDRRLAKRYGADFEAVKRRTSVVPFAAILDGRQKLPDDYYKEFIRLP 360

Query: 361 YLSITALTMGAYLAHPLMQAASFRLHW 385
           YLSITALT+GAYLAHPLMQAASFRLHW
Sbjct: 361 YLSITALTIGAYLAHPLMQAASFRLHW 375

[Close]

BLAST of Moc05g08940 vs. ExPASy TrEMBL
Match: A0A1S3BYR9 (15-cis-zeta-carotene isomerase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494534 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.9e-167
Identity = 312/380 (82.11%), Postives = 333/380 (87.63%), Query Frame = 0


Query: 6   AAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPN-FPPYPLNCSPISGPRRL 65
           A ASA P    P  +S       RHRRPDAISLR  SIS PN     PL+ + +   RR 
Sbjct: 2   AVASATPPFSPPYLSSP------RHRRPDAISLRPFSISAPNCLLQLPLSLNSLHIFRR- 61

Query: 66  ATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILGVVLF 125
                 F+A ASIGD ++GGSTSVSDD+GLVGEDAAVFDLS+QKLTSW YFTVILGVVLF
Sbjct: 62  ----PRFAAEASIGDRESGGSTSVSDDEGLVGEDAAVFDLSEQKLTSWVYFTVILGVVLF 121

Query: 126 VLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEKLVGE 185
           VLNVVWIDNS  G GKAF+DAVS +SDSHEVVML+L  IFAI HSGLA+LRDQGEKLVGE
Sbjct: 122 VLNVVWIDNSAGGVGKAFLDAVSGISDSHEVVMLLLTLIFAIVHSGLASLRDQGEKLVGE 181

Query: 186 RAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFLYPST 245
           RAFRVLFAG+SLPLAVSTVVYFINHRYDGVQLWQLQSVPG+HQLVW SSF+SFFFLYPST
Sbjct: 182 RAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLQSVPGLHQLVWLSSFVSFFFLYPST 241

Query: 246 FNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIGHH 305
           FNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQV+WCLAHTIWIGNSVAVAASIGLIGHH
Sbjct: 242 FNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHH 301

Query: 306 LFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLSITAL 365
           LFGVWNGDRRLAKRYG DFEAV+RRTS+IPFAAIVDGRQKLPDDYYKEF+RLPYLSITAL
Sbjct: 302 LFGVWNGDRRLAKRYGVDFEAVQRRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITAL 361

Query: 366 TMGAYLAHPLMQAASFRLHW 385
           T+GAYLAHPLMQAASFRLHW
Sbjct: 362 TIGAYLAHPLMQAASFRLHW 370

[Close]

BLAST of Moc05g08940 vs. ExPASy TrEMBL
Match: A0A0A0KXF1 (NnrU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015720 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 1.0e-165
Identity = 311/382 (81.41%), Postives = 327/382 (85.60%), Query Frame = 0


Query: 6   AAASAAPLLHYPLAASSSNQPHRRHRRPDAISLRHSSISIPNF---PPYPLNCSPISGPR 65
           A ASA P    P  +S    P  RHRRPDAIS R  SIS PN     P  LN   I    
Sbjct: 2   AVASATPPFSPPFLSS----PRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRP 61

Query: 66  RLATRLGDFSAGASIGDSDTGGSTSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILGVV 125
           RL        A ASIGD ++GGSTSVSDD+G VGEDAA FDLS+QKLTSW YFTVILGVV
Sbjct: 62  RLV-------AEASIGDRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVV 121

Query: 126 LFVLNVVWIDNSGVGFGKAFVDAVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEKLV 185
           LFVLNVVWIDNS  G GKAF+DAVS +SDSHEVVML+LI IFAI HSGLA+LRDQGEKLV
Sbjct: 122 LFVLNVVWIDNSAGGVGKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLV 181

Query: 186 GERAFRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFLYP 245
           GERAFRVLFAG+SLPLAVSTVVYFINHRYDGVQLWQLQSVP +HQLVW SSF+SF FLYP
Sbjct: 182 GERAFRVLFAGVSLPLAVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYP 241

Query: 246 STFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIG 305
           STFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQV+WCLAHTIWIGNSVAVAASIGLIG
Sbjct: 242 STFNLLEVAAVDKPKMHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIG 301

Query: 306 HHLFGVWNGDRRLAKRYGADFEAVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLSIT 365
           HHLFGVWNGDRRLAKRYGADFEAVK RTS+IPFAAIVDGRQKLPDDYYKEF+RLPYLSIT
Sbjct: 302 HHLFGVWNGDRRLAKRYGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSIT 361

Query: 366 ALTMGAYLAHPLMQAASFRLHW 385
           ALT+GAYLAHPLMQAASFRLHW
Sbjct: 362 ALTIGAYLAHPLMQAASFRLHW 372

[Close]

BLAST of Moc05g08940 vs. TAIR 10
Match: AT1G10830.1 (15-cis-zeta-carotene isomerase )

HSP 1 Score: 497.3 bits (1279), Expect = 1.1e-140
Identity = 236/300 (78.67%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 85  STSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILGVVLFVLNVVWIDNSGVGFGKAFVD 144
           S S S    L+GED+A F+L KQKL SW YF V+LGVVLF+LNVVWIDNS  GFGK+F+D
Sbjct: 69  SDSESSPTLLIGEDSAAFELGKQKLVSWVYFGVVLGVVLFILNVVWIDNS-TGFGKSFID 128

Query: 145 AVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEKLVGERAFRVLFAGISLPLAVSTVV 204
           AVS +S S EV MLMLI IFAI HSGLA+LRD GEKL+GERAFRVLFAGISLPLA+ST+V
Sbjct: 129 AVSNISGSPEVAMLMLILIFAIVHSGLASLRDIGEKLIGERAFRVLFAGISLPLAMSTIV 188

Query: 205 YFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFLYPSTFNLLEVAAVDKPKMHLWETG 264
           YFINHRYDG QLWQLQ VPGVH+ +W ++F+SFFFLYPSTFNLLEVAAVDKPKMHLWETG
Sbjct: 189 YFINHRYDGSQLWQLQGVPGVHEAIWVANFVSFFFLYPSTFNLLEVAAVDKPKMHLWETG 248

Query: 265 IIRITRHPQMVGQVMWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFE 324
           I+RITRHPQMVGQ++WCLAHT+WIGN+VA +AS+GLI HHLFG WNGDRRLAKRYG DFE
Sbjct: 249 IMRITRHPQMVGQIVWCLAHTLWIGNTVAASASLGLIAHHLFGAWNGDRRLAKRYGEDFE 308

Query: 325 AVKRRTSVIPFAAIVDGRQKLPDDYYKEFIRLPYLSITALTMGAYLAHPLMQAASFRLHW 384
           ++K+RTSVIPFAAI +GRQ LP+DYYKEF+RLPYL+ITALT+GAY AHPLMQ ASFRLHW
Sbjct: 309 SIKKRTSVIPFAAIFEGRQVLPEDYYKEFVRLPYLAITALTVGAYFAHPLMQGASFRLHW 367

[Close]

BLAST of Moc05g08940 vs. TAIR 10
Match: AT1G10830.2 (15-cis-zeta-carotene isomerase )

HSP 1 Score: 302.4 bits (773), Expect = 5.3e-82
Identity = 149/198 (75.25%), Postives = 170/198 (85.86%), Query Frame = 0


Query: 85  STSVSDDDGLVGEDAAVFDLSKQKLTSWAYFTVILGVVLFVLNVVWIDNSGVGFGKAFVD 144
           S S S    L+GED+A F+L KQKL SW YF V+LGVVLF+LNVVWIDNS  GFGK+F+D
Sbjct: 69  SDSESSPTLLIGEDSAAFELGKQKLVSWVYFGVVLGVVLFILNVVWIDNS-TGFGKSFID 128

Query: 145 AVSELSDSHEVVMLMLISIFAIAHSGLATLRDQGEKLVGERAFRVLFAGISLPLAVSTVV 204
           AVS +S S EV MLMLI IFAI HSGLA+LRD GEKL+GERAFRVLFAGISLPLA+ST+V
Sbjct: 129 AVSNISGSPEVAMLMLILIFAIVHSGLASLRDIGEKLIGERAFRVLFAGISLPLAMSTIV 188

Query: 205 YFINHRYDGVQLWQLQSVPGVHQLVWFSSFISFFFLYPSTFNLLEVAAVDKPKMHLWETG 264
           YFINHRYDG QLWQLQ VPGVH+ +W ++F+SFFFLYPSTFNLLEVAAVDKPKMHLWETG
Sbjct: 189 YFINHRYDGSQLWQLQGVPGVHEAIWVANFVSFFFLYPSTFNLLEVAAVDKPKMHLWETG 248

Query: 265 IIRITRHPQMVGQVMWCL 283
           I+RITRHPQ++   + CL
Sbjct: 249 IMRITRHPQVLNISLMCL 265

The following BLAST results are available for this feature:

BLAST of Moc05g08940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145219.1	1.7e-215	100.00	15-cis-zeta-carotene isomerase, chloroplastic [Momordica charantia]	[more]
XP_022972107.1	2.9e-175	84.29	15-cis-zeta-carotene isomerase, chloroplastic [Cucurbita maxima]	[more]
XP_022932715.1	6.5e-175	83.46	15-cis-zeta-carotene isomerase, chloroplastic [Cucurbita moschata] >KAG6597644.1...	[more]
XP_023540701.1	1.6e-173	83.29	15-cis-zeta-carotene isomerase, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038882546.1	7.5e-171	82.72	15-cis-zeta-carotene isomerase, chloroplastic [Benincasa hispida]	[more]

BLAST of Moc05g08940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAC0	1.6e-139	78.67	15-cis-zeta-carotene isomerase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
B4FHU1	2.5e-129	62.83	15-cis-zeta-carotene isomerase, chloroplastic OS=Zea mays OX=4577 PE=1 SV=1	[more]

BLAST of Moc05g08940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUK6	8.2e-216	100.00	15-cis-zeta-carotene isomerase, chloroplastic OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1I3V9	1.4e-175	84.29	15-cis-zeta-carotene isomerase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1F2X1	3.2e-175	83.46	15-cis-zeta-carotene isomerase, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3BYR9	1.9e-167	82.11	15-cis-zeta-carotene isomerase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0KXF1	1.0e-165	81.41	NnrU domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015720 PE=4 S...	[more]

BLAST of Moc05g08940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10830.1	1.1e-140	78.67	15-cis-zeta-carotene isomerase	[more]
AT1G10830.2	5.3e-82	75.25	15-cis-zeta-carotene isomerase	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009915	NnrU domain	PFAM	PF07298	NnrU	coord: 156..375 e-value: 4.9E-50 score: 170.0
None	No IPR available	GENE3D	1.20.120.1630		coord: 150..335 e-value: 2.1E-12 score: 49.2
None	No IPR available	PANTHER	PTHR35988	15-CIS-ZETA-CAROTENE ISOMERASE, CHLOROPLASTIC	coord: 70..384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g08940.1	Moc05g08940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016120	carotene biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0090471	9,15,9'-tri-cis-zeta-carotene isomerase activity