Moc05g08730 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g08730
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr5: 6666113 .. 6674694 (+)
RNA-Seq ExpressionMoc05g08730
SyntenyMoc05g08730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGACAAATATCACGCACACTATTATTATGAAGGGGTTCTGAAGTTCACCGGGGAGAATTTTAGTTTTTCAAAGATGCAAGTAAAAGATCTTCATACGTGCAAGAAGATACACGAGACCTTAGGGGAGAGACAAGCAGGGATGACCGATAAGGATTGGAATGAGATGGATAAGCAGATCATTGCGAATATCAGAATGTCGTTATCGATGAATGTTTGTAGTCTGGTGGCGAAAGAGACTACAACGAATGAGTTGTTGAAGGCCTTGCAAGACAGGTATGAAAAACCTTCTGCCAATACAAAAATACTTCTATGGATGAAGTATTTTAATATCCACAGGAGGGAACCTCGGTGAATTCCCACATTAATGAGCTCACCAATATCTTGAACAAGTTAGAAGGGATGAGTGTGAAGATTGAAGAGGTGGTGAAAGCTATCAGGTTGTTGACATCTTTGCCTAACAGTTGGGAGACAATGAAGACCGCGATGTCGAATTCGCTAGGGGAAAATAGCTTGAAATTTTCAGCTATTTGTGATGCCAACTTGTCTGAGGATGCCTGAAGAAAATTAGGGAAAATGTCTGCATCTACTTCAAGGACAGAAAACAAAGTTGAATCAGTTTTGGTAGGTCAGAACAAAGGGAAGACAAAGATGAATTACAATGGGAAGCAGCAACAGAGATATAACAGAGGTAGTGGAAGTTCCAATAGGGAAGTGGAGTGTTATTACTGCCACAAGAAGGGACACGTTAAACGCTTTTGCAGGAAGTTCAAAGAAGATTTTGAAAAGGGGAACAATACTGTAAATTTTGTAACAGAAGAAGATCGGGTTGAAGAGTTTCTGGCTTGTGTTCAGAGGAACATATCTGTAGACCAGTGGGTAATAGACACTGCAGCATCAGCGCACGTTGCTTTAGACAGACGTTAGTTCTCATTTCTTACTGTAGGTGATTATGGCTCAATGAAGATGGGGAATGAGAGTATCTCTAAGGTGAGAGGAATTGAAGATGTTTGTTTGAAGACAGGTGAAGGGGTTGAGTTGGTGCTATGAGGTGTCAGGTATATTCCTAGCTTCAGATTTAATTTGTTATCCGCAGGAAAGCTAGATGACGATGGCTACAACAGTGAGTTTAGTGGGGGTTGCTAAAAGCTCAAAAGGGAATCTAGGGTGGTGGCAACAGGCCACAAGAGATCTTCTGTTTATGTGTCTGAGTTTAAGGTTGTCAGGGGATCTGAGAGACAAAAAATGCACAGTGTAGCTGCAAATGGTTTAGGGCGAGACTTGAAAGAATCAGCAGCATTAACAGTCAGGACAGATCAGAAGAATCTGCCATCAGTTCAAGTACATCAGCTGGGAAGTAGAAGAAAGGGAAAGGAGAACAGCTCAGTGAGGTGTTCAGTAGACTGTTGGAACAATACCCAGTTGTCAGACGGATGAACGAGCTGATGAAGTCGCATAGGCGAGATAATGCATTGAGGGATAAGACTACAGTTGGTGCTAAAGTCAAGGGTAATGTCTCCAAAAAGGCAACAGACTTGGGTGGGAGCGCCAAGTCATCAGGGGAATCTTCCTTCAGAGGTCATTGGGTTCGATTGAGAAAGGAAGCGACGGGGACCACTTAGATCAAGTGGGAGGAAGTGGTGTCTCTAACGTTTGGGAGACAAGACCACGTAAGATTGCTCAGTCTCGGGGCAATCACAGATAGAGCTTGGGTAGGGCCGAGCAGTGTGGATCAGTTCGTTGATATAGTAGTCAGAACTGTGCCTTGATAAAGGGTGTCAAGAAGTTGATGGGACCTATTGATAGAGTGGGAGGCAAAGAATTGTTGCTTTGTCTCCAAGTGGGAGATTGTTGGGATTATGGAGCCAAAACAGGAAACCTATGTCCTATGAAGAAAATGATTTTTCAACACTATTACTAATTTCTACCATAGGATATTGTTGTCTTATAAGGATTACAATATTGTTTTCCTATAAGAATTAGCATATTTGGCCTCTTATAAGTAGATCTCTTATGTTAAGGTTTCATTTGTACAGAATCCAAATAAAAGGGATTTGAGTGGTTGTGGACAGTGTTGAAAAAGATTCTGTATCCCGTGTGTTTAGTGAGTGTTTTTCATTTATGTTTCTAAGTATTATTGTATTCAAATACTTAGAAGCTAGAGGGCTTTTGTTGGACCTCTAGGGGATATTTTTGGGGAGAGTTTTGTATTCCAATCCTGAACAATTATTCGTGAATTACCCACATATGAGTGGAAGACTGGACGTAGTCCTTAGTGGTGAACCAGTATAATTTTGCTGTGTTGTTTTCTTGTTCTATATTGCTTTTTTTTTTTCCTATTTCCATATTCTTGGTTGTGTTGGATATTTTCTGTGGAAGGGGAAATTATACAAGATCGTTAATTTCACAACAAAAGGGTCATCGAATTTGCACCGCTGGAATTCAGATTGTCGCACAGAGGGAAAGGTCGTCTCCATCTCTTGAGCCATCACCCTCATCGTCCCAGCCTCAGTTACCTGTCATGGACACTTCTTCACGACTTGACGAGGGGATTGGTGAGGAACATGTCGATGAAGGGGTTGGTGAGGAGCAACTACGTCGTGGACGTTGAAAGAAAGTACCACTTGTTAAGTTACAAGATTACGTGATACATACAGGTACTATGAAAAGTCCATCTCTTCCCCCATCTGGTCAACGCCATCATCCTTCCTCAGGGACTCCTTTTCCTATAGCACATTATGTTAGTTGTGATAAATTTACTGCACCACACCGAAATTTTCTTGTAACTATAACTAGAGGTGTTGGGCCACAATCTCTTAAAGAAGCTATCACAAATGCTGGATGTCATGTTGCTATGCAAAGATAAATTAGCGCTTTGGAAGACAATGGCACTTGGTCTATGGAAAAATTGCCTATCTGGAAGAAAGCTATTGGTAGTAAATGGGTGTACAAAATTAAATACAATTCTGATGGCAATATTGAGCGCTTAAAAGCCCGACTCGTTCTCCTTGGCAATCATCAAGTTGAAGGAATTGACTACAATGAGACTTTTGCTCAAATAGCAAAAATGATGATAGTTCGAATCTTTCTTGCGGTTGCAGGTTCGAAAAATTGGGAGTTGCATCAGATGGATGTACATAATGCCTTTCTTTATGGTGATTTGGATAAAGAGGTCTACATGAAACTTCCTCCAGGCTTTACATCTAGTGACTCCACCTTGGTTTGTCGACTACGAAAGTCACTGTATGGTTTACGTCAGGCTCCTAGATGTTGGTTTCCCAAGCTTGCGACAACTTTAAAGGGGTATGGTTTTCTTCAGTTTTATTCTGATTATTCTTTATTCACTTACACTAAAGGGTTAGTTCAACTCAATATTTTAGTGTATGTCGATGATTTGATCATCTCTAGCAATGATTATGTTGTGGTGAAGCGGTTTAAGGCATATTTGAGCCAATGTTTTCATATGAAGGATATTCTTGGTGTACTTAAATATTTCCTCGGTATTGAGGTGGCCAGAGATAATTCAGGTCTATATTTGTGCCAACGAACGTATGCTCTTGATATTATCTAGGAGGTTGGCTTATTGGGCTCCAAACCGATTTCATTTCCTCTCGAACAGAATCATCAGTTGGCACGTGCCACGAGTCATTCTCTCTCAGATCAGGAGTCATATCGACGCTTAGTTGGCTGCTATCTATTTGGCTGTCACTCGTCCTGACTTAGTTTACAGCCTCCACAACATAATCACTAGCATCACACATTAACTCAAAAGGACGATCCCAATCTGGAGTTACAACTATAGGAGCTGACACAAGCTTTTCTTTCAATAAATTAAAAGCTTTCAAGCATACATCATCAAATTGGAACTGTGTACCTTGCACCAACAGATTCGAAAGAGGTTTAGTAATTTTGGAAAAGTCTTTTATGAACTTCCTGTAAAACTCGGCATGGCCTAAAAAGCTCCTCACTCTCTTGACTGAAACAGGCGGTGGCAATTTCTCGATTATCTCTATCTTTGCTCTATCCACCTCGATTCCTCTGGAAGAAATTTTATGTCCTAGCACAATACCTTCTCGAACCATGAAATGACATTTCTCCTAATTCAAGACAAGGTTAGATTGCTCACATCTTTTCAACACCATTTCTAAATTAATGAGGCAATTATCAAATGAAACACCAAATACAGAAAAATCATCCATAAATACCTCATTACATTTCTCAACCATGTCTAAAAAGATGGCAATCATGCACTTTTGAAAAGTGGCGGGTGCATTGCATAAACCAAAGGGCATCCTCCTAAATGTGAAGGTACCATACGGGCACGTGAAGGTTGTCTTCTCTTAATCCTCTGGTGCAATTGCTATCTTATGATACTCGAAATACCTACCAAGGAAACAATAGTAATCATGCCCTGCTAACCGGTCCAACATCTGGTCAATAAAAGGCAAAGGAAAATGATCTTTCCTTTTTGCGTTATTTAACTTTCTGTAATCTATGCAAATTCTCCAACCAGTCACCAGTCTTGTAGGGATCAACTCATTATTCTCATTCTCAATTACTGTCATTCCTCCTTTCTTTTGGAACTAGATGCATTGGACTCACCCAGACACTGAAATAGGGTAAATTATTCCTGCATCGAGCCATTTTAGAATTTCACTTCTTACCACTTCTTTCATTTTCGGATTAAGTCTCCCCTGCACTTCAATTGATGGTAGAGTTGATGGTAGAGTACCATCTTCTAACAAAATCCTATGCATGCACAATGAAGGGTTGATATCCTTGATATATGCCAACGACCATCCTATTGCTAGTTTGTGTTTTCTTAGCACGCGTAGCAATTTGTCTTCCTCTTCACTAGACAACCCAGCTGAAACAATTACAGGGAGAGTAGACTCTTCACCCAAATATGTATATCTAAAGTGCGATGGTAGCAACTTCAACTCTAAAGTGGGGGCCTTTTCTATTAAAGGTGGATGCCTAGATGGAGATTGTCCTAGAGATTCATATCGCTCTCTCTCAAATGGGCTTAACGAATCCAACCACTTTATACATTTCATCACTTTTACATTTTCTAGTCCCTCAGGGACAGAGTGGATAAGTCTTACCTCAAGCGGTGTTGTCCATGTATCTGGCTGTTTTGAAACCAAAGAATCCAATAGATCAATGCGGAAACAACTATCACTCACTCTCGGATACTTGATGGCATTAAACATATTGAATGTGACTTCTTCACCTTGCACCCTCAAACACAGTTCACCCTTATAAACATCAATCAGGGCTTGTCCTGTTGCTAAAAATGGTCTTCCCAATATGATTGGGACTTCTCTATCTTCATCCATGTCAAGAACAACGAAATCAGCAGGAAAAATGAACTTGTCTACCATTACCAAGATGTCGTTAATGCTTCCTTTTGGGTGTTTAATGGATCGATCTGCCAATTGCAGAGTCACCGTCGTTGGGCTTGCTTCTCCCAATCCAAGCCTCTTGAAAATAGACAAAGGCATCAAATTTAAACTTGCCCCAAAATCACATAATGCTTTCTCAAAAGTGAAATTGCCAATAGAACATGGAATTGTAAAACTACCTAGATCTTTTAGCTTTTGAGGCAATTTTTATTGCAGGATGACACTGCAGTTTTCGGTGAGTGCCACTGTCTCATATTCTTCAAGTTTCCTCTTGTTCGACAAAATTTCTTTCATAAACTTGACATAGCTCGGCATCTGTTCAAGGGCATATGCAAAAGGAATATTAATATGAAGTTTCTTGAAAACATCTACAAATTTAGAGAACTGCTTATCTAGTTTACCCTTTCTAAGACGTTCAGGATAAAGCACGCTATGTTTTTCCTCTTCTTGTGGATGGATCACTTTATTAGGTTGTTCCTCAGGTGCCACTGGAACTTCAGATGGTGAGGCTTTGGCAAATGTGCTCTTTTCCTTTCCAATTTGTGCCTCAACTGTTTTGCCACTTCGCAAAGGTAATGGCCTTGCACTGCTCTTTAGGATTCAGTTTCGTTGTGCTTGGTAAGTTTCCTTGTTGACGATTGGTGTTCATATTTACCAATTGACCAACTTGTATCTCCAAATTTCGAATGGATGCTGCTTGATTTTGAAAGTTGGTCTTTTCGTTTCCACCATGAACTGATTTGTGTTATTTGCCATTTGCAACATCACTTCTTCAAGGTTATTCTTCTTTTCTGGCTGTTGGAACCCCGGTGGAGGAAGAGTAGTGTTTTGGTTCTGATTCTGATTCTGTCGCCATGAGAAATTTGGGTGGTTGTGCCAACGTGGATTATATGTGTTAGAATATGGATTGTTTGGCCGGCGATTAAAATTCCCAACAAAGTGAGCTTGCTCATGTTGGCCTTGCATAAATGGATTTCCCACTTGACAATCTTCGCTCTATGGTTACCATGGTAGTACTGACACAATGTAGATGGTGTTTGAATAGCATTTACTCCTAAATGGCTTGCTTGGAAAGTGAAGCAACCTACGCGGTTAATGCAGTGATAGCATCTACCTCATTTACTCCCATCGACCTTTTCTGAGTTGATCTCTCACTATGTCACTGGTAATTGTTCAATGTCATTTCCTCTAACAAGTCATATGCTCCGCTTTCAGTTTTACCCATGAAAGCTCCTTCTGATGCTGCGTCAATCGTAGTTCTTGTTCTATTATCTAATCCATTATAAACATTTTGCACTTGCATCCATTTAGGTAATCCATGGTGTGGGCACTTTTTTAGGAGCTCCTTGTATTTTTCCTATGCTTCATACAGTGTCTCTCCCTCAAAATGAGCAAAGTTATTAATCTCAACTCGAATCTTAGTAGACTTTGCAGGTGGAAAGAACTTGGCAAGGAATTTCTGAGCCAAATAATTCCATGTCTGAATTGAATCTACCGGCAAAGACTTCAACCATTGCTTAGCTCGGTCCTTTAGAGAGAACGGAAAAAGCCTTAGTTTGATAGCCTCATCTGTCACTCCATTATATTTGAATGTGTTGCAGATCTCTAAAAAATTTGCTATATGAGCATTTGAATCTTCACTTGGTAATCCACAAAATTGTACTGAAGTCTGGTCATCTGAAGCGTAGCCGGCTTGATCTCAAAATTTTTTGCTTAAATTGCACTAAAATCCCCAATTTTTTCCCACCAATCTCAATTTTTCTATCTTAAAGCTTGTTTCCCTTACTGATTTTTGTTGATTTCAGGCCCCTCTCCCCCACCAATGTGGATTCTTGCACATTTTCTCATGGGTTTTGTTCTCAATGCTTCATGGGTCTCTCTTCCAAGTTTGCTTTCGATCTAGACGTGGTTTCAACGGAAATCTTCTGGATTTTTCAAGTATCTTATAGGTATCTACTCCAAGTAAATGTATTTTAAGCATTTGAGTTTTGAATGTTGGTTTGCCATAGTTTCTTGTTGGTGGAAGGTTTCTCTCTTGTTGTTAAGAAACTCATTGTGTTGTGAGGTGGTTTCAAGGAGTCTTAGGAGTTGGTTGGGATAAATTTTGTAGCCAAAAATTTGAGGGAGTTTCTGTCATAGGTCCTAAATGATTAAAACTTGGAAGTTCCTCTGAATCATTTTTCAAAAACCGTTTTGTTGACATTGAGGCAGCCCGCTCTTATTTAGATTTAGTGGTTAAGCAAAGTATAGTGTCAGAAACGGGTTTACAACCTTGTTGTGTTGATCAGTCAAATATTTTTAGAAACATTGAGCAGCGAAGGTGGGGAGAGTTTGTAAAATCGCCCCAGTCTGCTGTGGTTCCCCATTGTGAGAGAATTTTATACAAATTTGAAAGAGGGGAGCACTAAGAGCTTTGTTCAAAAGAAGATGGTTGCTTTTGATTTTTCCGCCATCAATAAAATTTACAACTTACCAGACATTGATCGGGATGGGTACAACGCTTATGCAGCAGATGATTTAGATTATGATGAGGTTATTGCGACGTTGTGTAAGCCCGATACCCAGTGGAAAACCCGCCGAGAGGAGAAGTTGAGTTTCAAAACGTCTGAGTTAAGTGTGATTAATAAAGTGTGGCTAATTTCATTTGCGCCCGATTCCTTCCCACGACCCATGTGAGCGATGTCAAAAAGGATAGAGCAATCATTCTTTATGCCATTGTAACAGGAAAGTCCATTGATGTGGGGAGAATCATTCAGCAATCCATAAAGCATGGCAAGCGGGCATTGACCACGGGTGGCTTGGGTCACCCTTCGTTGATCACAACTTTATGGAAGGCGGCTAGAGTGGTGTGGGGACCAGATGATGAACTACAGCACCCTGGGCAATTATGGACAGGAACTATATATTTGGCCTAAAAGGATGGGATTCTGATGACAATGCTCCCACTGAGCAAGATAATATAGAGGCTACTTATTTAAGGGATGTCAGGGTGTCGTTGTCTTTGCAGGAGAGATTTGAACGAATGGATAGGCGTTAGCAAAGATAGTATGTCTATCGAAATCAATTTAATGCCCGCCTTATTCAGATGATGATGCAACAAGGATTTAATCAAGGGCCCGAGCCGGTTCAGTTTCCTGATCCGCCGCAGGCCTCTGACGACGATGTTGACGCATGA

mRNA sequence

ATGGGAGACAAATATCACGCACACTATTATTATGAAGGGGTTCTGAAGTTCACCGGGGAGAATTTTAGTTTTTCAAAGATGCAAGTAAAAGATCTTCATACGTGCAAGAAGATACACGAGACCTTAGGGGAGAGACAAGCAGGGATGACCGATAAGGATTGGAATGAGATGGATAAGCAGATCATTGCGAATATCAGAATGTCGTTATCGATGAATGTTTGTAGTCTGGTGGCGAAAGAGACTACAACGAATGAGTTGTTGAAGGCCTTGCAAGACAGAAAATTAGGGAAAATGTCTGCATCTACTTCAAGGACAGAAAACAAAGTTGAATCAGTTTTGGTAGGTCAGAACAAAGGGAAGACAAAGATGAATTACAATGGGAAGCAGCAACAGAGATATAACAGAGGTAGTGGAAGTTCCAATAGGGAAGTGGAGTGTTATTACTGCCACAAGAAGGGACACGTTAAACGCTTTTGCAGGAAGTTCAAAGAAGATTTTGAAAAGGGGAACAATACTGTAAATTTTGTAACAGAAGAAGATCGGGTTGAAGAGTTTCTGGCTTGTCTCAAAAGGGAATCTAGGGTGGTGGCAACAGGCCACAAGAGATCTTCTGTTTATGTGTCTGAGTTTAAGGTTGTCAGGGGATCTGAGAGACAAAAAATGCACAGTGTAGCTGCAAATGGTTTAGGGCGAGACTTGAAAGAATCAGCAGCATTAACAGTCAGGACAGATCAGAAGAATCTGCCATCAGTTCAAGTACATCAGCTGGGAAGTAGAAGAAAGGGAAAGGAGAACAGCTCAGTGAGGCGAGATAATGCATTGAGGGATAAGACTACAGTTGGTGCTAAAGTCAAGGGTAATGTCTCCAAAAAGGCAACAGACTTGGGTGGGAGCGCCAAGTCATCAGGGGAATCTTCCTTCAGAGGTCATTGGATTGTCGCACAGAGGGAAAGGTCGTCTCCATCTCTTGAGCCATCACCCTCATCGTCCCAGCCTCAGTTACCTGTCATGGACACTTCTTCACGACTTGACGAGGGGATTGGTGAGGAACATGTCGATGAAGGGGTTGGTGCCACTGGAACTTCAGATGGTGAGGCTTTGGCAAATGTGCTCTTTTCCTTTCCAATTTGTGCCTCAACTGTTTTGCCACTTCGCAAAGGTAATGGCCTTGCACTGCTCTTTAGGATTCAGTTTCGTTGTGCTTGGCCCCTCTCCCCCACCAATGTGGATTCTTGCACATTTTCTCATGGGTTTTGTTCTCAATGCTTCATGGGTCTCTCTTCCAAGTTTGCTTTCGATCTAGACGTGGTTTCAACGGAAATCTTCTGGATTTTTCAAGTATCTTATAGAAACATTGAGCAGCGAAGGTGGGGAGAGTTTGTAAAATCGCCCCAGTCTGCTGTGGTTCCCCATTACATTGATCGGGATGGGTACAACGCTTATGCAGCAGATGATTTAGATTATGATGAGGTTATTGCGACGTTGTGTAAGCCCGATACCCAGTGGAAAACCCGCCGAGAGGAGAAGTTGAGTTTCAAAACGTCTGAGTTAAGAAAGTCCATTGATGTGGGGAGAATCATTCAGCAATCCATAAAGCATGGCAAGCGGGCATTGACCACGGGTGGCTTGGGTCACCCTTCGTTGATCACAACTTTATGGAAGGCGGCTAGAGTGATGATGATGCAACAAGGATTTAATCAAGGGCCCGAGCCGGTTCAGTTTCCTGATCCGCCGCAGGCCTCTGACGACGATGTTGACGCATGA

Coding sequence (CDS)

ATGGGAGACAAATATCACGCACACTATTATTATGAAGGGGTTCTGAAGTTCACCGGGGAGAATTTTAGTTTTTCAAAGATGCAAGTAAAAGATCTTCATACGTGCAAGAAGATACACGAGACCTTAGGGGAGAGACAAGCAGGGATGACCGATAAGGATTGGAATGAGATGGATAAGCAGATCATTGCGAATATCAGAATGTCGTTATCGATGAATGTTTGTAGTCTGGTGGCGAAAGAGACTACAACGAATGAGTTGTTGAAGGCCTTGCAAGACAGAAAATTAGGGAAAATGTCTGCATCTACTTCAAGGACAGAAAACAAAGTTGAATCAGTTTTGGTAGGTCAGAACAAAGGGAAGACAAAGATGAATTACAATGGGAAGCAGCAACAGAGATATAACAGAGGTAGTGGAAGTTCCAATAGGGAAGTGGAGTGTTATTACTGCCACAAGAAGGGACACGTTAAACGCTTTTGCAGGAAGTTCAAAGAAGATTTTGAAAAGGGGAACAATACTGTAAATTTTGTAACAGAAGAAGATCGGGTTGAAGAGTTTCTGGCTTGTCTCAAAAGGGAATCTAGGGTGGTGGCAACAGGCCACAAGAGATCTTCTGTTTATGTGTCTGAGTTTAAGGTTGTCAGGGGATCTGAGAGACAAAAAATGCACAGTGTAGCTGCAAATGGTTTAGGGCGAGACTTGAAAGAATCAGCAGCATTAACAGTCAGGACAGATCAGAAGAATCTGCCATCAGTTCAAGTACATCAGCTGGGAAGTAGAAGAAAGGGAAAGGAGAACAGCTCAGTGAGGCGAGATAATGCATTGAGGGATAAGACTACAGTTGGTGCTAAAGTCAAGGGTAATGTCTCCAAAAAGGCAACAGACTTGGGTGGGAGCGCCAAGTCATCAGGGGAATCTTCCTTCAGAGGTCATTGGATTGTCGCACAGAGGGAAAGGTCGTCTCCATCTCTTGAGCCATCACCCTCATCGTCCCAGCCTCAGTTACCTGTCATGGACACTTCTTCACGACTTGACGAGGGGATTGGTGAGGAACATGTCGATGAAGGGGTTGGTGCCACTGGAACTTCAGATGGTGAGGCTTTGGCAAATGTGCTCTTTTCCTTTCCAATTTGTGCCTCAACTGTTTTGCCACTTCGCAAAGGTAATGGCCTTGCACTGCTCTTTAGGATTCAGTTTCGTTGTGCTTGGCCCCTCTCCCCCACCAATGTGGATTCTTGCACATTTTCTCATGGGTTTTGTTCTCAATGCTTCATGGGTCTCTCTTCCAAGTTTGCTTTCGATCTAGACGTGGTTTCAACGGAAATCTTCTGGATTTTTCAAGTATCTTATAGAAACATTGAGCAGCGAAGGTGGGGAGAGTTTGTAAAATCGCCCCAGTCTGCTGTGGTTCCCCATTACATTGATCGGGATGGGTACAACGCTTATGCAGCAGATGATTTAGATTATGATGAGGTTATTGCGACGTTGTGTAAGCCCGATACCCAGTGGAAAACCCGCCGAGAGGAGAAGTTGAGTTTCAAAACGTCTGAGTTAAGAAAGTCCATTGATGTGGGGAGAATCATTCAGCAATCCATAAAGCATGGCAAGCGGGCATTGACCACGGGTGGCTTGGGTCACCCTTCGTTGATCACAACTTTATGGAAGGCGGCTAGAGTGATGATGATGCAACAAGGATTTAATCAAGGGCCCGAGCCGGTTCAGTTTCCTGATCCGCCGCAGGCCTCTGACGACGATGTTGACGCATGA

Protein sequence

MGDKYHAHYYYEGVLKFTGENFSFSKMQVKDLHTCKKIHETLGERQAGMTDKDWNEMDKQIIANIRMSLSMNVCSLVAKETTTNELLKALQDRKLGKMSASTSRTENKVESVLVGQNKGKTKMNYNGKQQQRYNRGSGSSNREVECYYCHKKGHVKRFCRKFKEDFEKGNNTVNFVTEEDRVEEFLACLKRESRVVATGHKRSSVYVSEFKVVRGSERQKMHSVAANGLGRDLKESAALTVRTDQKNLPSVQVHQLGSRRKGKENSSVRRDNALRDKTTVGAKVKGNVSKKATDLGGSAKSSGESSFRGHWIVAQRERSSPSLEPSPSSSQPQLPVMDTSSRLDEGIGEEHVDEGVGATGTSDGEALANVLFSFPICASTVLPLRKGNGLALLFRIQFRCAWPLSPTNVDSCTFSHGFCSQCFMGLSSKFAFDLDVVSTEIFWIFQVSYRNIEQRRWGEFVKSPQSAVVPHYIDRDGYNAYAADDLDYDEVIATLCKPDTQWKTRREEKLSFKTSELRKSIDVGRIIQQSIKHGKRALTTGGLGHPSLITTLWKAARVMMMQQGFNQGPEPVQFPDPPQASDDDVDA
Homology
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BLAST of Moc05g08730 vs. NCBI nr
Match: XP_022152155.1 (cinnamoyl-CoA reductase-like SNL6 [Momordica charantia])

HSP 1 Score: 110.5 bits (275), Expect = 4.8e-20
Identity = 72/128 (56.25%), Postives = 83/128 (64.84%), Query Frame = 0 

Query: 195 VVATGHKRSSVYVSEFKVVRGSERQKMHSVAANGLGRDLKESAALTVRTDQKNLPSVQVH 254
           VVATGHKRS VYVSEF+V +GS RQ MH V A G  R L+  AAL  +TDQKNLPS QV 
Sbjct: 2   VVATGHKRSYVYVSEFEVAKGSLRQTMHKVVAYGSRRYLRRPAALMAKTDQKNLPSPQVK 61

Query: 255 QLGSRRKGKEN--------SSVR-RDNALRDKTTVGA-KVKGNVSKKATDLGGSAKSSGE 313
           QL S +KG EN        S+VR     ++    + A K  G++S  AT L GSAKSSGE
Sbjct: 62  QLRSTKKGNENLIGHRVHTSAVRCLGELVKSHRRISALKGTGSISSVATYLSGSAKSSGE 121

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BLAST of Moc05g08730 vs. NCBI nr
Match: XP_022157059.1 (uncharacterized protein LOC111023870 [Momordica charantia])

HSP 1 Score: 87.0 bits (214), Expect = 5.7e-13
Identity = 61/118 (51.69%), Postives = 67/118 (56.78%), Query Frame = 0 

Query: 204 SVYVSEFKVVRGSERQKMHSVAANGLGRDLKESAALTVRTDQKNLPSVQVHQLGSRRKGK 263
           SV   E   + GS RQ MH VA +  GRDLK    L  RTDQKNLPS  V QL S  KG 
Sbjct: 42  SVGKLETMAIAGSLRQTMHRVATDSSGRDLKGPTTLMARTDQKNLPSAHVKQLRSTEKGN 101

Query: 264 EN--------SSVRRDNAL-RDKTTVGA-KVKGNVSKKATDLGGSAKSSGESSFRGHW 312
           EN        S+VRR   L +    + A K  G VS   TDLGGSAKSSGESSF+G W
Sbjct: 102 ENLIGHQVHTSAVRRSGELVKSHRRISAFKGTGFVSSVVTDLGGSAKSSGESSFKGRW 159

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BLAST of Moc05g08730 vs. NCBI nr
Match: RVW30183.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-09
Identity = 59/193 (30.57%), Postives = 96/193 (49.74%), Query Frame = 0 

Query: 13  GVLKFTGENFSFSKMQVKDLHTCKKIH-ETLGERQAGMTDKDWNEMDKQIIANIRMSLSM 72
           G+ KF G +F++ +MQ++D    +K+H   LG +   M  ++W  +D+Q++  IR++LS 
Sbjct: 10  GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAEEWALLDRQVLGVIRLTLSR 69

Query: 73  NVCSLVAKETTTNELLKAL-------------------------QDRKLGKMSASTSRTE 132
           +V   V KE TT +L+KAL                         + R  G+ S S S   
Sbjct: 70  SVAHNVVKEKTTADLMKALSVSNSTGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSAL- 129

Query: 133 NKVESVLVGQNKGKTKMNYNGKQQQRYNRGSGSSNREVECYYCHKKGHVKRFCRKFKEDF 180
             +E+   G N+   +   N +   R NR    S ++V+C+ C K GH KR C+  K+  
Sbjct: 130 -NLETRGRGNNRNSNQGRSNSRNSNR-NRSKSRSGQQVQCWNCGKTGHFKRQCKSPKKKN 189

[Close]
BLAST of Moc05g08730 vs. NCBI nr
Match: RVX02202.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 74.3 bits (181), Expect = 3.8e-09
Identity = 59/210 (28.10%), Postives = 99/210 (47.14%), Query Frame = 0 

Query: 13  GVLKFTGENFSFSKMQVKDLHTCKKIH-ETLGERQAGMTDKDWNEMDKQIIANIRMSLSM 72
           G+ KF G +F++ +MQ++D    +K+H   LG +   M  K+W  +D+Q++  IR++LS 
Sbjct: 10  GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKAKEWPLLDRQVLGVIRLTLSR 69

Query: 73  NVCSLVAKETTTNELLKALQDRKLGKM--------------SASTSRTENKVESV----- 132
           +V   V KE TT +L+KAL D   G++              S ST + + K   +     
Sbjct: 70  SVTHNVVKEKTTADLMKALSDSCSGRLDFFAKQLGGNEDAVSNSTGKEKLKYNDIRDLIL 129

Query: 133 --------------------LVGQNKGKTKMNYNGKQQQR---YNRGSGSSNREVECYYC 180
                               L  + +G  + +  G+   R    NR    S ++V+C+ C
Sbjct: 130 AEEIRRRDASETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNRNRSKSRSGQQVQCWNC 189

[Close]
BLAST of Moc05g08730 vs. NCBI nr
Match: RVX04667.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 73.6 bits (179), Expect = 6.6e-09
Identity = 60/209 (28.71%), Postives = 98/209 (46.89%), Query Frame = 0 

Query: 13  GVLKFTGENFSFSKMQVKDLHTCKKIH-ETLGERQAGMTDKDWNEMDKQIIANIRMSLSM 72
           G+ KF G +F++ +MQ++D    +K+H   LG +   M  ++W  +D+Q++  IR++LS 
Sbjct: 10  GIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPESMKVEEWALLDRQVLGVIRLTLSR 69

Query: 73  NVCSLVAKETTTNELLKALQ--------DRKLGKMSASTSRTENK--------------- 132
           +V   V KE TT +L+KAL         + KLG M  + S +  K               
Sbjct: 70  SVAHNVVKEKTTADLMKALSGMYEKPSANNKLGVMRMAVSNSTGKEKLKYNDIRDLILAE 129

Query: 133 ------------------VESVLVGQNKGKTKMNYNGKQQQRYNRGSGSSNREVECYYCH 180
                             +E+   G N+   +   N +   R NR    S ++V+C+ C 
Sbjct: 130 EIRQRDAGETSGSGSALNLETRGRGNNRNSNQGRSNSRNSNR-NRSKSRSGQQVQCWNCG 189

[Close]
BLAST of Moc05g08730 vs. ExPASy TrEMBL
Match: A0A6J1DD48 (cinnamoyl-CoA reductase-like SNL6 OS=Momordica charantia OX=3673 GN=LOC111019944 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-20
Identity = 72/128 (56.25%), Postives = 83/128 (64.84%), Query Frame = 0 

Query: 195 VVATGHKRSSVYVSEFKVVRGSERQKMHSVAANGLGRDLKESAALTVRTDQKNLPSVQVH 254
           VVATGHKRS VYVSEF+V +GS RQ MH V A G  R L+  AAL  +TDQKNLPS QV 
Sbjct: 2   VVATGHKRSYVYVSEFEVAKGSLRQTMHKVVAYGSRRYLRRPAALMAKTDQKNLPSPQVK 61

Query: 255 QLGSRRKGKEN--------SSVR-RDNALRDKTTVGA-KVKGNVSKKATDLGGSAKSSGE 313
           QL S +KG EN        S+VR     ++    + A K  G++S  AT L GSAKSSGE
Sbjct: 62  QLRSTKKGNENLIGHRVHTSAVRCLGELVKSHRRISALKGTGSISSVATYLSGSAKSSGE 121

[Close]
BLAST of Moc05g08730 vs. ExPASy TrEMBL
Match: A0A6J1DVE9 (uncharacterized protein LOC111023870 OS=Momordica charantia OX=3673 GN=LOC111023870 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.8e-13
Identity = 61/118 (51.69%), Postives = 67/118 (56.78%), Query Frame = 0 

Query: 204 SVYVSEFKVVRGSERQKMHSVAANGLGRDLKESAALTVRTDQKNLPSVQVHQLGSRRKGK 263
           SV   E   + GS RQ MH VA +  GRDLK    L  RTDQKNLPS  V QL S  KG 
Sbjct: 42  SVGKLETMAIAGSLRQTMHRVATDSSGRDLKGPTTLMARTDQKNLPSAHVKQLRSTEKGN 101

Query: 264 EN--------SSVRRDNAL-RDKTTVGA-KVKGNVSKKATDLGGSAKSSGESSFRGHW 312
           EN        S+VRR   L +    + A K  G VS   TDLGGSAKSSGESSF+G W
Sbjct: 102 ENLIGHQVHTSAVRRSGELVKSHRRISAFKGTGFVSSVVTDLGGSAKSSGESSFKGRW 159

[Close]
BLAST of Moc05g08730 vs. ExPASy TrEMBL
Match: A0A2N9FSS1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17686 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-11
Identity = 61/192 (31.77%), Postives = 97/192 (50.52%), Query Frame = 0 

Query: 13  GVLKFTGENFSFSKMQVKDLHTCKKIH-ETLGERQAGMTDKDWNEMDKQIIANIRMSLSM 72
           G+ KF G +F + +MQ++D    KK+H   LGE+   M D +W  +D+Q++  IR++LS 
Sbjct: 10  GIEKFDGTDFGYWRMQIEDYLYGKKLHLPLLGEKPEDMEDAEWTLLDRQVLGVIRLTLSR 69

Query: 73  NVCSLVAKETTTNELLKALQD--------------RKLGKMSASTSRTENKVE------- 132
            V   V KE TT EL+ AL                +KL  +  +      + +       
Sbjct: 70  LVAHNVVKEKTTAELMTALCGMYEKPSANNKVHLMKKLFNLKMAEGEEVRRRDAGETSSS 129

Query: 133 -SVLVGQNKGKTK-MNYN-GKQQQRYNRGSGSSNREVECYYCHKKGHVKRFCRKFKEDFE 180
            S L  + +G+ K  NYN G+ + R  R      R++EC+ C K GH+++ C + K+  E
Sbjct: 130 GSALNLETRGRVKDRNYNRGRSKSRKGRSKSKPGRQLECWNCGKTGHIRKNCWELKKKNE 189

[Close]
BLAST of Moc05g08730 vs. ExPASy TrEMBL
Match: A0A0D3BI58 (CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-10
Identity = 49/156 (31.41%), Postives = 79/156 (50.64%), Query Frame = 0 

Query: 16  KFTGENFSFSKMQVKDLHTCKKIHETLGERQAGMTDKDWNEMDKQIIANIRMSLSMNVCS 75
           KF G +++F +MQ++D    KK+H+ L ++   M   +W  +D+Q++  IR++ S NV  
Sbjct: 13  KFDGTDYAFWRMQIEDYLYGKKLHQPLSKKPEKMDQDEWELLDRQVLGVIRLTQSKNVAH 72

Query: 76  LVAKETTTNELLKALQDRKLGKMSASTSRTENKVESVLVGQNKGKTKMNYNGKQQQRYNR 135
            VAKE TT  L+K L D                     +G+N  +   + NG+ + R  R
Sbjct: 73  NVAKEKTTEGLMKVLSD---------------------IGRNPDRNNRS-NGRSKSRNGR 132

Query: 136 GSGSSNREVECYYCHKKGHVKRFCR--KFKEDFEKG 170
           G     +  +C+ C K GH+K+ CR    KED  +G
Sbjct: 133 GQSKFRQPAKCWICGKTGHIKKNCRAPPKKEDNTRG 146

[Close]
BLAST of Moc05g08730 vs. ExPASy TrEMBL
Match: A0A2N9IKQ5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52541 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.4e-10
Identity = 64/220 (29.09%), Postives = 103/220 (46.82%), Query Frame = 0 

Query: 13  GVLKFTGENFSFSKMQVKDLHTCKKIH-ETLGERQAGMTDKDWNEMDKQIIANIRMSLSM 72
           G+ KF G +F + +MQ++D    KK+H   LGE+   M D +W  +D+Q++  IR++LS 
Sbjct: 10  GIEKFDGTDFGYWRMQIEDYLYGKKLHLPLLGEKPEDMEDAEWTLLDRQVLGVIRLTLSR 69

Query: 73  NVCSLVAKETTTNELLKAL--------------------QDRKLG-----KMSASTSRTE 132
            V   V KE TT EL+ AL                    Q +  G     +M+ S S  +
Sbjct: 70  TVAHNVVKEKTTAELMTALCGMYEKPSANNKVHLMKKLVQSKNGGSWEAMRMAVSNSAGK 129

Query: 133 -----NKVESVLVGQN--------------------KGKTK-MNYN-GKQQQRYNRGSGS 180
                N +  +++G+                     +G+ K  NYN G+ + R  R    
Sbjct: 130 GKLKYNDIRDLILGEEVRRRDAGETSSSGSALNLEARGRGKDRNYNRGRSKSRKGRSKSK 189

[Close]
BLAST of Moc05g08730 vs. TAIR 10
Match: AT3G29785.1 (unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.1 bits (144), Expect = 7.0e-09
Identity = 28/77 (36.36%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 16 KFTGENFSFSKMQVKDLHTCKKIHETLGERQAGMTDKDWNEMDKQIIANIRMSLSMNVCS 75
          K  G ++SF +M+++D    KK+H+ LG++   M+  DWN + +Q++  IR+++S N+  
Sbjct: 8  KVDGTSYSFCRMKIEDYLYGKKLHQPLGKKVETMSQDDWNILYRQVLDVIRLTISKNIAH 67

Query: 76 LVAKETTTNELLKALQD 93
           VAKE + + L+K L D
Sbjct: 68 NVAKEKSPDGLMKVLSD 84

The following BLAST results are available for this feature:
BLAST of Moc05g08730 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152155.14.8e-2056.25cinnamoyl-CoA reductase-like SNL6 [Momordica charantia][more]
XP_022157059.15.7e-1351.69uncharacterized protein LOC111023870 [Momordica charantia][more]
RVW30183.11.7e-0930.57Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVX02202.13.8e-0928.10Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVX04667.16.6e-0928.71Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
BLAST of Moc05g08730 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc05g08730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DD482.3e-2056.25cinnamoyl-CoA reductase-like SNL6 OS=Momordica charantia OX=3673 GN=LOC111019944... [more]
A0A6J1DVE92.8e-1351.69uncharacterized protein LOC111023870 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A2N9FSS12.6e-1131.77Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17686 PE=4 SV=1[more]
A0A0D3BI581.3e-1031.41CCHC-type domain-containing protein OS=Brassica oleracea var. oleracea OX=109376... [more]
A0A2N9IKQ56.4e-1029.09Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52541 PE=4 SV=1[more]
BLAST of Moc05g08730 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G29785.17.0e-0936.36unknown protein; Has 90 Blast hits to 90 proteins in 7 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.60.10coord: 116..172
e-value: 4.9E-5
score: 25.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..339
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 566..587
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 146..161
score: 8.630785
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 125..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g08730.1Moc05g08730.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding