Moc05g07660 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g07660
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	50S ribosomal protein l3
Location	chr5: 5614857 .. 5618479 (-)
RNA-Seq Expression	Moc05g07660
Synteny	Moc05g07660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCTTTATCCAGAGGTCTCGTTTCTCGTTTCCGTCTTCTCTCCATCAATTCCGGCGCCTCTTCTACAATTTCCCCTTCTTCTTCGCGAACGCATCCCTCTTGTTACTACTTCTTCCGTTCTTTCAGCTCCGAGGATTTGATCCAGGCCGGCGACGTCTCCTCGCCTTCTTCTCCGATCATTGAAGCTAAGCCCGGTGTCATGGCCCCTAACTCGAAGCGGACGGGCGTCATTGCCGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCATCACCGTGCTCTGGGTTGATGATAATATTGTGTCTCAGGTCAAGACAATCGAGAAAGAAGGTATCACAGCCCTCCAGGTATTACTTAACTCTCTTCTTCTCATTTTCATTCCATTGCCGGAGATAATTTTTGTTTCTCCTTCTTGTTATTATCACTGAGGAGTCTATTTTTGGAACACTATTCACTATTTTAATCTCTTGTGTTATGGCAGCACTTCACTTTCAAGTCCTTGGATTTTGGAATTATACTGAACTGAACTGCACGCCGTTTTGGATTAGTGTCTAACTATGAATACACTTAATTAGACCTAAATATAACCATCTGTGACAGTTTTTTAATTAATAACTGGGTTTTGTGGGTCATTATGCTCATGACCAACCTCCCTAATATTTGGGAGGATTCGCCCACTCCAAAGATAGCTCTGAGAGACAACAAGCGTTTTAGAAATTACTACCATTTACTCCCATTGTTGTTTTCAATATTTCTAAGAAAAAACCAGTTGTCTTGAGTATTAGACCATATGTATGAGGTTTGTTTTTTCAGTTTTAAAAATCTTATATCGCATAGGTAGGTGATAGGACTTGAGTTTATTGACCAAAGGTGCTATGCTATGGTGCTAGTTAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCGGAATTAGGACATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAACTGAGGGAGTTTCCAGTGTCAGCAGATGCACTTCTTCCAGTTGGTACAACAATTGGTGTTCGTCATTTTGTCCCTGGACAGTATGTTGATGTGACTGGAATCACAAGAGGGAAAGGTTTTCAGGTGAATCCATTGTAGCATTCCTCTAGTTTTTGAACTTGCACCCTTTACCATTTTATTTGTCATTCAATTCCTTATATTTGTTAATATGGTTAAGTTAGTTGCATATTTGAAGCCCTTAAGGTGCTAGGATCATTCGAAATAGAATTGACATGTGAATATCTTTTAGAGATACAATTTATGGATTTTAATGCCATCGCGGGAACATTGAGTGGTATAAATGTATGTCTCTCTTTGAATTTTGGTCAAATTATCTATCCAATGAAATAATGGATTTAACAGATTACGTTGCAACGCAATAATCGGCTGAATAACAAAGAATACTGTAACCACGAGAGTAAGCAATTATTTACACGAAACACAATAACCCCACCCAAAGCTTTTGACATGTTATCATGCTTAATCATGCTCCAACTTGTTTCTTGGCATGCATGCTTAATTAACTAACACTCTGCATGATCTGCAAGGTACAATGTAACTGTGAAAGTTACCATGCTGCACATGTATGTTAGACTAAGAGAACATGAACGGTTTCTCAATGAGGTCATGTGCATCCTTAAGGAGAAAAGAATAACACGATCCATGGATATAAATATAAGCATGAAAGTGTTTGTGGCTACAGAACCCTAGGAAAGACATGTACGTGGCTGATTATTTATGTGGAGCTATGATATTTGCTTTGTCTTCTCTACATGTTTGTGCCAGTTTGGCTGATTTTGGGTTGTATATTTGTGTCCCGAAAGTGATTCACGAGGTCCAATCCACAACTATCATATAAATAACTGTTTTCTTTCCATGTAGGTATATTATTTTTTCTGTTTCCCTAAAAGTGATGTCTCTCATGGCTAATTTTTTTTTTCTAACTGTGCACAGGGAGTGATGAAAAGGCATGGATTTAAAGGAATGCCAGCATCCCATGGAGCATCATTATCCCATAGAAGCCCTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTGTGCTTATCTTGACGTTCATTTTTAAGATTGAGTGGTATATCAGTTCTCAAATGCGTTTTAGAGCTACCCTACCTGAAACATGTGCTGGATACTCACATTTGAGATAGTTGCTATTTCGTGTTCGCTTACTGGGTGGGTCTCTCTGATTCTGGGAGTTGTGCTGCTTCTCTCTCTCTCTCTCATGTCAATTTGCAAGGCTCCTTCTCAATGAATGAAAATTTTAGAGATGAGAATTAACAATTTACTAAACCATCATGGTGTGGCCTAGTGGTCAATAAGGGTCAAATAACATATGGCTTAGAGGGAATGACTTCAAAAGGTGGCCACATACCTAGAATTTAATATCCTATGAATTACCTTGGCAACCACATGTACTAGGGTCAGACAGTTATCCTGTGAGATTAGTCGAGGTGCGTGCAAGCTGGCTCGGACACTCACGGATATAAAGAAAAAGAATTTGGAATTTTACTAGGAGTGTTTAGTCAACAAATATGAATAGCTGGCACCCTGGGAAGTGTATGGTTTTTGGATTTAACTATGCTTTTGGATGGAATCAATATTAAGTAATATTTGGAAGTTACTACTTGTGGTTGCAATCTTGAAAATAATATCCTGACGAAACTTAATTTACTAAGTTTTAAGAGATTGAACCTGAATCCCTATACTGAATTTATCTTCAACAGAAGTACTGTGTTTGGATAGAACATACTTTGATTTAGTTTGTTGGAATCATGGAAACTTTTGTGTTGAATGGCAGAATCTCATTCCTGTTTCTAAAGATAAAGGAAAAAAATCCCATAATGTGGAATAATATCCTTGTGACTATGGTCCGTTATGTTAATGTAGTGAAGAATTGTAATTCTTTCTCTCTTTATATCATGTAATTTATGACAGTGAGAAAGCATATACTTATTTTGCAGGTCTTTAAAGGTAAAAAAATGCCTGGACGCATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGGTCTACAAAATTGACCCCGCAAGAAACTTGATATGGGTGAAAGGCCAAGTACGTTTCTTATAAAAACCTAATTCCAACTCCTGATCCAATCCATATTCTCTAGAGTCCTTGTTCTGTTTCTATGTTTGACCCATAAATTTCATACTCTTGGCACAACATGGTCTGAGATTATTGCTGCACACACCTTCAGGTCCCCGGTGCCGAAGGAAACTTTGTATTTATAAAAGACGCATTCTACAAGAAACCCGATAAGTCGATCCTTCCGTTTCCCACCTACTTCGCAACTGAAGACGAGGACTCCGAGAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGTTGGAGATTGATTAGGAGTTGCCTTTTCAGCGCAAGTAGTGGATTTTGGTCTGCTTTTGGTTTTTTATTTTCAACTTCTGATAGTGTATGCAGGCGTGCTTATTGATGGCCCTGATGAGTAGTCAATTTCATTATAGAAATGCAGCTGGAGGATCTGTACGAGGAAATCCAACCTCTTAA

mRNA sequence

ATGTCGGCTTTATCCAGAGGTCTCGTTTCTCGTTTCCGTCTTCTCTCCATCAATTCCGGCGCCTCTTCTACAATTTCCCCTTCTTCTTCGCGAACGCATCCCTCTTGTTACTACTTCTTCCGTTCTTTCAGCTCCGAGGATTTGATCCAGGCCGGCGACGTCTCCTCGCCTTCTTCTCCGATCATTGAAGCTAAGCCCGGTGTCATGGCCCCTAACTCGAAGCGGACGGGCGTCATTGCCGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCATCACCGTGCTCTGGGTTGATGATAATATTGTGTCTCAGGTCAAGACAATCGAGAAAGAAGGTATCACAGCCCTCCAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCGGAATTAGGACATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAACTGAGGGAGTTTCCAGTGTCAGCAGATGCACTTCTTCCAGTTGGTACAACAATTGGTGTTCGTCATTTTGTCCCTGGACAGTATGTTGATGTGACTGGAATCACAAGAGGGAAAGGTTTTCAGGGAGTGATGAAAAGGCATGGATTTAAAGGAATGCCAGCATCCCATGGAGCATCATTATCCCATAGAAGCCCTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTCTTTAAAGGTAAAAAAATGCCTGGACGCATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGGTCTACAAAATTGACCCCGCAAGAAACTTGATATGGGTGAAAGGCCAAGTCCCCGGTGCCGAAGGAAACTTTGTATTTATAAAAGACGCATTCTACAAGAAACCCGATAAGTCGATCCTTCCGTTTCCCACCTACTTCGCAACTGAAGACGAGGACTCCGAGAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGCGTGCTTATTGATGGCCCTGATGAGTAGTCAATTTCATTATAGAAATGCAGCTGGAGGATCTGTACGAGGAAATCCAACCTCTTAA

Coding sequence (CDS)

ATGTCGGCTTTATCCAGAGGTCTCGTTTCTCGTTTCCGTCTTCTCTCCATCAATTCCGGCGCCTCTTCTACAATTTCCCCTTCTTCTTCGCGAACGCATCCCTCTTGTTACTACTTCTTCCGTTCTTTCAGCTCCGAGGATTTGATCCAGGCCGGCGACGTCTCCTCGCCTTCTTCTCCGATCATTGAAGCTAAGCCCGGTGTCATGGCCCCTAACTCGAAGCGGACGGGCGTCATTGCCGTCAAGTGTGGAATGTCGGCGCTGTGGGATAAATGGGGAGCTAGGATACCCATCACCGTGCTCTGGGTTGATGATAATATTGTGTCTCAGGTCAAGACAATCGAGAAAGAAGGTATCACAGCCCTCCAGATTGGCTGTGGACAGAAGAAGGCGAAGCATTTGACAAAACCGGAATTAGGACATTTTAGGGCTCAAGGTGTTCCATTGAAGAGGAAACTGAGGGAGTTTCCAGTGTCAGCAGATGCACTTCTTCCAGTTGGTACAACAATTGGTGTTCGTCATTTTGTCCCTGGACAGTATGTTGATGTGACTGGAATCACAAGAGGGAAAGGTTTTCAGGGAGTGATGAAAAGGCATGGATTTAAAGGAATGCCAGCATCCCATGGAGCATCATTATCCCATAGAAGCCCTGGTTCTACGGGTCAGAGGGATGCTCCTGGAAAGGTCTTTAAAGGTAAAAAAATGCCTGGACGCATGGGTGGGAAGCAGAGAACTGTGAAAAATGTGTGGGTCTACAAAATTGACCCCGCAAGAAACTTGATATGGGTGAAAGGCCAAGTCCCCGGTGCCGAAGGAAACTTTGTATTTATAAAAGACGCATTCTACAAGAAACCCGATAAGTCGATCCTTCCGTTTCCCACCTACTTCGCAACTGAAGACGAGGACTCCGAGAAGTTGGAACCTCTTGTTGCTGATCTTGGAGAAGTAGATCCATTTATGGCGTGCTTATTGATGGCCCTGATGAGTAGTCAATTTCATTATAGAAATGCAGCTGGAGGATCTGTACGAGGAAATCCAACCTCTTAA

Protein sequence

MSALSRGLVSRFRLLSINSGASSTISPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATEDEDSEKLEPLVADLGEVDPFMACLLMALMSSQFHYRNAAGGSVRGNPTS

Homology

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BLAST of Moc05g07660 vs. NCBI nr
Match: XP_022138212.1 (50S ribosomal protein L3-2, chloroplastic [Momordica charantia])

HSP 1 Score: 644.4 bits (1661), Expect = 5.5e-181
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MSALSRGLVSRFRLLSINSGASSTISPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSSP 60
           MSALSRGLVSRFRLLSINSGASSTISPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSSP
Sbjct: 1   MSALSRGLVSRFRLLSINSGASSTISPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSSP 60

Query: 61  IIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGIT 120
           IIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGIT
Sbjct: 61  IIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGIT 120

Query: 121 ALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQY 180
           ALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQY
Sbjct: 121 ALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQY 180

Query: 181 VDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMG 240
           VDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMG
Sbjct: 181 VDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMG 240

Query: 241 GKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATED 300
           GKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATED
Sbjct: 241 GKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATED 300

Query: 301 EDSEKLEPLVADLGEVDPFM 321
           EDSEKLEPLVADLGEVDPFM
Sbjct: 301 EDSEKLEPLVADLGEVDPFM 320

[Close]

BLAST of Moc05g07660 vs. NCBI nr
Match: XP_022972230.1 (50S ribosomal protein L3-2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 595.1 bits (1533), Expect = 3.8e-166
Identity = 297/323 (91.95%), Postives = 308/323 (95.36%), Query Frame = 0


Query: 1   MSALSRGLVSRFRLLSINSGASSTI---SPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSP 60
           MSALSRGL+SRFRLLSINSGAS TI   S SSS THPSCY+FFR+FS+E  IQAGD SS 
Sbjct: 1   MSALSRGLISRFRLLSINSGASPTITSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSSL 60

Query: 61  SSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKE 120
           SSPIIEAK GVM+PNSKRTGVIAVKCGMSALWDKWGAR+PITVLWVDDNIVSQVKTIEKE
Sbjct: 61  SSPIIEAKSGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEKE 120

Query: 121 GITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVP 180
           GITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVS DALLPVGTTIGVRHFVP
Sbjct: 121 GITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSEDALLPVGTTIGVRHFVP 180

Query: 181 GQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPG 240
           GQ+VDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKM G
Sbjct: 181 GQFVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMAG 240

Query: 241 RMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFA 300
           RMGGKQRTVKNVWVYKIDPARNL+WV+GQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFA
Sbjct: 241 RMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFA 300

Query: 301 TEDEDSEKLEPLVADLGEVDPFM 321
            +DED+E LEPLVADLGEVDPFM
Sbjct: 301 NDDEDTETLEPLVADLGEVDPFM 323

[Close]

BLAST of Moc05g07660 vs. NCBI nr
Match: XP_022947107.1 (50S ribosomal protein L3-2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 587.0 bits (1512), Expect = 1.0e-163
Identity = 292/324 (90.12%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MSALSRGLVSRFRLLSINSGASSTI----SPSSSRTHPSCYYFFRSFSSEDLIQAGDVSS 60
           MSALSRGL+SRFRLLSINS AS TI    S SSS THPSCY+FFR+FS+E  IQAGD SS
Sbjct: 1   MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60

Query: 61  PSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
            SSPIIEAKPGVM+PNSKRTGVIAVKCGMSALWDKWGAR+PITVLWVDDNIVSQVKTIEK
Sbjct: 61  LSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFV 180
           EGITALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKLREFPV+ DALLPVGTTIGVRHFV
Sbjct: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV 180

Query: 181 PGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMP 240
           PGQ++DVTGITRGKGFQGVMK+HGFKGMPASHGASLSHRS GSTGQRDAPGKVFKGKKM 
Sbjct: 181 PGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300
           GRMGGKQRTVKNVWVYKIDPARNL+WV+GQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300

Query: 301 ATEDEDSEKLEPLVADLGEVDPFM 321
           A  DED+E LEPLVADLGEVDPFM
Sbjct: 301 ANNDEDTETLEPLVADLGEVDPFM 324

[Close]

BLAST of Moc05g07660 vs. NCBI nr
Match: KAG7029037.1 (50S ribosomal protein L3-2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 585.9 bits (1509), Expect = 2.3e-163
Identity = 291/324 (89.81%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MSALSRGLVSRFRLLSINSGASSTI----SPSSSRTHPSCYYFFRSFSSEDLIQAGDVSS 60
           MSALSRGL+SRFRLLSINS AS TI    S SSS THPSCY+FFR+FS+E  IQAGD SS
Sbjct: 1   MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60

Query: 61  PSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
            +SPIIEAKPGVM+PNSKRTGVIAVKCGMSALWDKWGAR+PITVLWVDDNIVSQVKTIEK
Sbjct: 61  LTSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFV 180
           EGITALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKLREFPV+ DALLPVGTTIGVRHFV
Sbjct: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV 180

Query: 181 PGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMP 240
           PGQ++DVTGITRGKGFQGVMK+HGFKGMPASHGASLSHRS GSTGQRDAPGKVFKGKKM 
Sbjct: 181 PGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300
           GRMGGKQRTVKNVWVYKIDPARNL+WV+GQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300

Query: 301 ATEDEDSEKLEPLVADLGEVDPFM 321
           A  DED+E LEPLVADLGEVDPFM
Sbjct: 301 ANNDEDTETLEPLVADLGEVDPFM 324

[Close]

BLAST of Moc05g07660 vs. NCBI nr
Match: KAG6597593.1 (50S ribosomal protein L3-2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 585.1 bits (1507), Expect = 4.0e-163
Identity = 292/324 (90.12%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MSALSRGLVSRFRLLSINSGASSTI----SPSSSRTHPSCYYFFRSFSSEDLIQAGDVSS 60
           MSALSRGL+SRFRLLSINS AS TI    S SSS THPSCY+FFR+FS+E  IQAGD SS
Sbjct: 1   MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60

Query: 61  PSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
            SSPIIEAKPGVM+PNSKRTGVIAVKCGMSALWDKWGAR+PITVLWVDDNIVSQVKTIEK
Sbjct: 61  LSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFV 180
           EGITALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKLREFPV+ DALLPVGTTIGVRHFV
Sbjct: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV 180

Query: 181 PGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMP 240
           PGQ+VDVTGITRGKGFQGVMKRHGF GMPASHGASLSHRS GSTGQRDAPGKVFKGKKM 
Sbjct: 181 PGQFVDVTGITRGKGFQGVMKRHGFDGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300
           GRMGGKQRTVKNVWVYKIDPARNL+WV+GQVPGAEGNFVFIKDAFYKKP+KSILPFPTYF
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPNKSILPFPTYF 300

Query: 301 ATEDEDSEKLEPLVADLGEVDPFM 321
           A +DED+E LEPLVADLGEVDPFM
Sbjct: 301 ANDDEDTETLEPLVADLGEVDPFM 324

[Close]

BLAST of Moc05g07660 vs. ExPASy Swiss-Prot
Match: Q9LRN8 (50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL3B PE=1 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.4e-134
Identity = 247/326 (75.77%), Postives = 273/326 (83.74%), Query Frame = 0


Query: 1   MSALSRGLVSRF-RLLSINSGASSTISPSSSRTHPSCYYFF--RSFSSEDLIQAG---DV 60
           M+A+ RGL+SR  + LSI S     I+PSSS + P C  FF  R FSS+  +  G   D+
Sbjct: 1   MAAVPRGLLSRINQFLSIRS-----ITPSSSESLPHCSSFFLIRRFSSDTGLMDGGGSDI 60

Query: 61  SSPSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTI 120
               + IIEAK G M+  SKRTG+IAVKCGM+ALWDKWG RIPI++LWVDDNIVSQVKT+
Sbjct: 61  IGAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTV 120

Query: 121 EKEGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRH 180
           EKEGI ALQIGCGQKK KHL+K  +GHFRAQGVPLKRKLREFPV+ DALLPVGT++GVRH
Sbjct: 121 EKEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGVRH 180

Query: 181 FVPGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKK 240
           FVPGQYVDVTGITRGKGFQG MKRHGF GMPASHGASLSHRS GSTGQRDAPGKVFKG+K
Sbjct: 181 FVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRK 240

Query: 241 MPGRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPT 300
           M GRMG  QRTVKNVWVYKIDPARNL+WV+GQVPGAEGNFVFIKDA+ KKPD S LPFPT
Sbjct: 241 MAGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISKLPFPT 300

Query: 301 YFATEDEDSEKLEPLVADLGEVDPFM 321
           Y A EDED  +LEPLVADLGEVDPFM
Sbjct: 301 YLAPEDEDPSELEPLVADLGEVDPFM 321

[Close]

BLAST of Moc05g07660 vs. ExPASy Swiss-Prot
Match: Q2G8Y0 (50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=rplC PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.0e-57
Identity = 111/206 (53.88%), Postives = 148/206 (71.84%), Query Frame = 0


Query: 75  RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 134
           RTGVIA K GM+ L+ + G  +P+TVL +++  V  V+T E++G  ALQ+G G+ K K++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKNV 61

Query: 135 TKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQG 194
            KP+  HF    VPLK ++ EF V+ DALL VG+TI   HFVPGQYVD+TG T+GKGFQG
Sbjct: 62  AKPQREHFAKAEVPLKMEVAEFRVADDALLDVGSTIAASHFVPGQYVDITGQTQGKGFQG 121

Query: 195 VMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYKI 254
            MKR GF GM A+HG S+SHR+ GSTG R  PG+VFK KKM G MG +QRT +N+ V + 
Sbjct: 122 AMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVVRT 181

Query: 255 DPARNLIWVKGQVPGAEGNFVFIKDA 281
           D  R LI+VKG VPG++  ++ ++DA
Sbjct: 182 DDERGLIFVKGSVPGSKNAWLLVRDA 207

[Close]

BLAST of Moc05g07660 vs. ExPASy Swiss-Prot
Match: Q5NQ64 (50S ribosomal protein L3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=rplC PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.0e-57
Identity = 117/238 (49.16%), Postives = 157/238 (65.97%), Query Frame = 0


Query: 75  RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 134
           RTGVIA K GM+ L+ + G  +P+TVL ++D  V  VK  +++G  A+Q+G G  KAK++
Sbjct: 2   RTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKNV 61

Query: 135 TKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQG 194
           TKP  GHF    V LK KL EFPVS DA+L VGT+I   HF+ GQ VD++G T+GKGF G
Sbjct: 62  TKPVRGHFAKAEVELKAKLVEFPVSEDAVLEVGTSISADHFIAGQLVDISGQTQGKGFAG 121

Query: 195 VMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYKI 254
            MKR GF G+ A+HG SLSHRS GSTG R  PG+VFK KKM G MG +QRT +N+ V   
Sbjct: 122 AMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVIST 181

Query: 255 DPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATEDEDSEKLEPLVAD 313
           D  R+LI+V+G VPG++G ++ I+DA  K    +  P+P      + +     P+ A+
Sbjct: 182 DAERDLIFVRGSVPGSKGAWLIIRDA-VKVARPTDAPYPAAIKAANGNEAPAAPVAAE 238

[Close]

BLAST of Moc05g07660 vs. ExPASy Swiss-Prot
Match: Q5FTY3 (50S ribosomal protein L3 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rplC PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.6e-56
Identity = 115/219 (52.51%), Postives = 146/219 (66.67%), Query Frame = 0


Query: 75  RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 134
           RTG+IA K GM+ L+ + G  +P+TVL +D+  V   +T E++G TA+Q+G G  K K++
Sbjct: 2   RTGLIAKKLGMTRLFKEDGTHVPVTVLHLDNVEVVDARTNERDGYTAIQLGLGNAKVKNV 61

Query: 135 TKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQG 194
           TK   GHF    V  KR L EF VS DALL  GT +   HFV GQ VDVTG ++GKGF G
Sbjct: 62  TKANRGHFARTKVEPKRHLAEFRVSEDALLEAGTKLSAAHFVVGQKVDVTGQSKGKGFAG 121

Query: 195 VMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYKI 254
           VMKRH F G+ ASHG S+SHRS GSTGQR  PGKVFKGKKM G MG ++ T  N+ +  +
Sbjct: 122 VMKRHNFAGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGDERVTTLNLEIAAV 181

Query: 255 DPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFP 294
           D  RNLI V+G +PGA+   V I+DA  KK   +  P+P
Sbjct: 182 DEERNLIMVRGAIPGAKNGLVLIRDAI-KKARHADAPYP 219

[Close]

BLAST of Moc05g07660 vs. ExPASy Swiss-Prot
Match: Q5LLU6 (50S ribosomal protein L3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) OX=246200 GN=rplC PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.9e-55
Identity = 115/219 (52.51%), Postives = 147/219 (67.12%), Query Frame = 0


Query: 75  RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKAKHL 134
           R+G+IA K GM+ L+ + G +IP+TVL +D+  V   +T EK+G TA+Q+G G  K K +
Sbjct: 2   RSGIIAKKVGMTRLFMEDGKQIPVTVLQLDNLQVVAQRTTEKDGYTAVQLGAGTPKIKRV 61

Query: 135 TKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQG 194
           +K   GHF AQ V  KRKL EF VS DAL+ VG  I   HF+ GQ VDV+G + GKGF G
Sbjct: 62  SKAMRGHFAAQKVEPKRKLAEFRVSEDALIEVGAEISAEHFLTGQKVDVSGTSIGKGFAG 121

Query: 195 VMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYKI 254
            MKRH F G+ ASHG S+SHRS GSTGQ   PG+VFKGKKM G MG  + T +N+ V K 
Sbjct: 122 AMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLEVVKT 181

Query: 255 DPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFP 294
           D  R L+++KG VPG +  +V +KDA  KK  +  LPFP
Sbjct: 182 DAERGLVFIKGAVPGPKSGWVTVKDAVKKKAPEG-LPFP 219

[Close]

BLAST of Moc05g07660 vs. ExPASy TrEMBL
Match: A0A6J1CAF7 (50S ribosomal protein L3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111009440 PE=3 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.7e-181
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MSALSRGLVSRFRLLSINSGASSTISPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSSP 60
           MSALSRGLVSRFRLLSINSGASSTISPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSSP
Sbjct: 1   MSALSRGLVSRFRLLSINSGASSTISPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSPSSP 60

Query: 61  IIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGIT 120
           IIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGIT
Sbjct: 61  IIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGIT 120

Query: 121 ALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQY 180
           ALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQY
Sbjct: 121 ALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVPGQY 180

Query: 181 VDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMG 240
           VDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMG
Sbjct: 181 VDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMG 240

Query: 241 GKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATED 300
           GKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATED
Sbjct: 241 GKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFATED 300

Query: 301 EDSEKLEPLVADLGEVDPFM 321
           EDSEKLEPLVADLGEVDPFM
Sbjct: 301 EDSEKLEPLVADLGEVDPFM 320

[Close]

BLAST of Moc05g07660 vs. ExPASy TrEMBL
Match: A0A6J1I7Y9 (50S ribosomal protein L3-2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470821 PE=3 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.9e-166
Identity = 297/323 (91.95%), Postives = 308/323 (95.36%), Query Frame = 0


Query: 1   MSALSRGLVSRFRLLSINSGASSTI---SPSSSRTHPSCYYFFRSFSSEDLIQAGDVSSP 60
           MSALSRGL+SRFRLLSINSGAS TI   S SSS THPSCY+FFR+FS+E  IQAGD SS 
Sbjct: 1   MSALSRGLISRFRLLSINSGASPTITSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSSL 60

Query: 61  SSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKE 120
           SSPIIEAK GVM+PNSKRTGVIAVKCGMSALWDKWGAR+PITVLWVDDNIVSQVKTIEKE
Sbjct: 61  SSPIIEAKSGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEKE 120

Query: 121 GITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFVP 180
           GITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVS DALLPVGTTIGVRHFVP
Sbjct: 121 GITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSEDALLPVGTTIGVRHFVP 180

Query: 181 GQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPG 240
           GQ+VDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKM G
Sbjct: 181 GQFVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMAG 240

Query: 241 RMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFA 300
           RMGGKQRTVKNVWVYKIDPARNL+WV+GQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFA
Sbjct: 241 RMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYFA 300

Query: 301 TEDEDSEKLEPLVADLGEVDPFM 321
            +DED+E LEPLVADLGEVDPFM
Sbjct: 301 NDDEDTETLEPLVADLGEVDPFM 323

[Close]

BLAST of Moc05g07660 vs. ExPASy TrEMBL
Match: A0A6J1G5I5 (50S ribosomal protein L3-2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451076 PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 5.1e-164
Identity = 292/324 (90.12%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MSALSRGLVSRFRLLSINSGASSTI----SPSSSRTHPSCYYFFRSFSSEDLIQAGDVSS 60
           MSALSRGL+SRFRLLSINS AS TI    S SSS THPSCY+FFR+FS+E  IQAGD SS
Sbjct: 1   MSALSRGLISRFRLLSINSAASPTITSSSSSSSSWTHPSCYFFFRTFSTEGSIQAGDGSS 60

Query: 61  PSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
            SSPIIEAKPGVM+PNSKRTGVIAVKCGMSALWDKWGAR+PITVLWVDDNIVSQVKTIEK
Sbjct: 61  LSSPIIEAKPGVMSPNSKRTGVIAVKCGMSALWDKWGARVPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFV 180
           EGITALQIGCGQKKAKHLTKPE+GHFRAQGVPLKRKLREFPV+ DALLPVGTTIGVRHFV
Sbjct: 121 EGITALQIGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFV 180

Query: 181 PGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMP 240
           PGQ++DVTGITRGKGFQGVMK+HGFKGMPASHGASLSHRS GSTGQRDAPGKVFKGKKM 
Sbjct: 181 PGQFIDVTGITRGKGFQGVMKKHGFKGMPASHGASLSHRSLGSTGQRDAPGKVFKGKKMA 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300
           GRMGGKQRTVKNVWVYKIDPARNL+WV+GQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF
Sbjct: 241 GRMGGKQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAFYKKPDKSILPFPTYF 300

Query: 301 ATEDEDSEKLEPLVADLGEVDPFM 321
           A  DED+E LEPLVADLGEVDPFM
Sbjct: 301 ANNDEDTETLEPLVADLGEVDPFM 324

[Close]

BLAST of Moc05g07660 vs. ExPASy TrEMBL
Match: E5GC40 (50S ribosomal protein l3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 6.2e-154
Identity = 276/325 (84.92%), Postives = 299/325 (92.00%), Query Frame = 0


Query: 1   MSALSRGLVSRFRLLSINSGASSTIS----PSSSRTHPSCYYFFRSFSSEDLIQAGDVSS 60
           MSALSRGL+SR RLLSINSGAS +++     SSSRT+ SCYYFFR+FS++DL QA D S 
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           P+S IIEAKPG M+ NS+RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFV 180
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKL+EFPVS DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMP 240
           PGQYVDVTGI+RGKGFQGVMKRHGFKGMPASHGASLSHRS GSTGQRDAPGKVFKG+KM 
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKS-ILPFPTY 300
           GRMGGKQRTVKNVW+YKIDPARNLIWVKG +PGAEG+FVFIKDA YK+ +KS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FATEDEDSEKLEPLVADLGEVDPFM 321
           FAT+ ED++KLEPLVADLGEVDPFM
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFM 325

[Close]

BLAST of Moc05g07660 vs. ExPASy TrEMBL
Match: A0A1S3AYD1 (50S ribosomal protein L3-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103483925 PE=3 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 6.2e-154
Identity = 276/325 (84.92%), Postives = 299/325 (92.00%), Query Frame = 0


Query: 1   MSALSRGLVSRFRLLSINSGASSTIS----PSSSRTHPSCYYFFRSFSSEDLIQAGDVSS 60
           MSALSRGL+SR RLLSINSGAS +++     SSSRT+ SCYYFFR+FS++DL QA D S 
Sbjct: 1   MSALSRGLISRLRLLSINSGASHSVTSSSYSSSSRTNASCYYFFRAFSTQDLTQASDGSL 60

Query: 61  PSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120
           P+S IIEAKPG M+ NS+RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK
Sbjct: 61  PASSIIEAKPGTMSSNSRRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEK 120

Query: 121 EGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRHFV 180
           EGITALQIGCGQKK KHL+KPELGHFRAQGVPLKRKL+EFPVS DALLPVGT IG RHFV
Sbjct: 121 EGITALQIGCGQKKEKHLSKPELGHFRAQGVPLKRKLKEFPVSQDALLPVGTEIGARHFV 180

Query: 181 PGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMP 240
           PGQYVDVTGI+RGKGFQGVMKRHGFKGMPASHGASLSHRS GSTGQRDAPGKVFKG+KM 
Sbjct: 181 PGQYVDVTGISRGKGFQGVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMA 240

Query: 241 GRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKS-ILPFPTY 300
           GRMGGKQRTVKNVW+YKIDPARNLIWVKG +PGAEG+FVFIKDA YK+ +KS ILPFPTY
Sbjct: 241 GRMGGKQRTVKNVWIYKIDPARNLIWVKGPIPGAEGSFVFIKDAMYKRLNKSAILPFPTY 300

Query: 301 FATEDEDSEKLEPLVADLGEVDPFM 321
           FAT+ ED++KLEPLVADLGEVDPFM
Sbjct: 301 FATDGEDTDKLEPLVADLGEVDPFM 325

[Close]

BLAST of Moc05g07660 vs. TAIR 10
Match: AT3G17465.1 (ribosomal protein L3 plastid )

HSP 1 Score: 480.7 bits (1236), Expect = 9.8e-136
Identity = 247/326 (75.77%), Postives = 273/326 (83.74%), Query Frame = 0


Query: 1   MSALSRGLVSRF-RLLSINSGASSTISPSSSRTHPSCYYFF--RSFSSEDLIQAG---DV 60
           M+A+ RGL+SR  + LSI S     I+PSSS + P C  FF  R FSS+  +  G   D+
Sbjct: 1   MAAVPRGLLSRINQFLSIRS-----ITPSSSESLPHCSSFFLIRRFSSDTGLMDGGGSDI 60

Query: 61  SSPSSPIIEAKPGVMAPNSKRTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTI 120
               + IIEAK G M+  SKRTG+IAVKCGM+ALWDKWG RIPI++LWVDDNIVSQVKT+
Sbjct: 61  IGAQTRIIEAKQGEMSSRSKRTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTV 120

Query: 121 EKEGITALQIGCGQKKAKHLTKPELGHFRAQGVPLKRKLREFPVSADALLPVGTTIGVRH 180
           EKEGI ALQIGCGQKK KHL+K  +GHFRAQGVPLKRKLREFPV+ DALLPVGT++GVRH
Sbjct: 121 EKEGIFALQIGCGQKKPKHLSKAVVGHFRAQGVPLKRKLREFPVTEDALLPVGTSLGVRH 180

Query: 181 FVPGQYVDVTGITRGKGFQGVMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKK 240
           FVPGQYVDVTGITRGKGFQG MKRHGF GMPASHGASLSHRS GSTGQRDAPGKVFKG+K
Sbjct: 181 FVPGQYVDVTGITRGKGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRK 240

Query: 241 MPGRMGGKQRTVKNVWVYKIDPARNLIWVKGQVPGAEGNFVFIKDAFYKKPDKSILPFPT 300
           M GRMG  QRTVKNVWVYKIDPARNL+WV+GQVPGAEGNFVFIKDA+ KKPD S LPFPT
Sbjct: 241 MAGRMGADQRTVKNVWVYKIDPARNLMWVRGQVPGAEGNFVFIKDAWCKKPDISKLPFPT 300

Query: 301 YFATEDEDSEKLEPLVADLGEVDPFM 321
           Y A EDED  +LEPLVADLGEVDPFM
Sbjct: 301 YLAPEDEDPSELEPLVADLGEVDPFM 321

[Close]

BLAST of Moc05g07660 vs. TAIR 10
Match: AT2G43030.1 (Ribosomal protein L3 family protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-37
Identity = 86/206 (41.75%), Postives = 125/206 (60.68%), Query Frame = 0


Query: 77  GVIAVKCGMSALWDKWGARIPITVL-WVDDNIVSQVKTIEKEGITALQIGCGQKKAKHLT 136
           GV+  K GM + +++ G  +P+TV+ + + NIV+Q+KT+  +G  A+QIG  + + K LT
Sbjct: 57  GVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLT 116

Query: 137 KPELGHFRAQGVPLKRKLREFPV-SADALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQG 196
           KPE GH +  G    R L+EF + + +   P    +    F  G  VDV G T GKGFQG
Sbjct: 117 KPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQG 176

Query: 197 VMKRHGFKGMPASHGASLSHRSPGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYKI 256
            +KRH FK    +HG S SHR+ GS G    PG+V+KGKKMPGRMGG +  ++ + + K+
Sbjct: 177 GIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKV 236

Query: 257 DPARNLIWVKGQVPGAEGNFVFIKDA 281
           D   N++ +KG +PG  GN + I  A
Sbjct: 237 DKELNVVMIKGALPGKPGNLLRITPA 261

The following BLAST results are available for this feature:

BLAST of Moc05g07660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138212.1	5.5e-181	100.00	50S ribosomal protein L3-2, chloroplastic [Momordica charantia]	[more]
XP_022972230.1	3.8e-166	91.95	50S ribosomal protein L3-2, chloroplastic [Cucurbita maxima]	[more]
XP_022947107.1	1.0e-163	90.12	50S ribosomal protein L3-2, chloroplastic [Cucurbita moschata]	[more]
KAG7029037.1	2.3e-163	89.81	50S ribosomal protein L3-2, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]
KAG6597593.1	4.0e-163	90.12	50S ribosomal protein L3-2, mitochondrial, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of Moc05g07660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRN8	1.4e-134	75.77	50S ribosomal protein L3-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL...	[more]
Q2G8Y0	1.0e-57	53.88	50S ribosomal protein L3 OS=Novosphingobium aromaticivorans (strain ATCC 700278 ...	[more]
Q5NQ64	4.0e-57	49.16	50S ribosomal protein L3 OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 ...	[more]
Q5FTY3	2.6e-56	52.51	50S ribosomal protein L3 OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=rpl...	[more]
Q5LLU6	2.9e-55	52.51	50S ribosomal protein L3 OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / ...	[more]

BLAST of Moc05g07660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CAF7	2.7e-181	100.00	50S ribosomal protein L3-2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1I7Y9	1.9e-166	91.95	50S ribosomal protein L3-2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1G5I5	5.1e-164	90.12	50S ribosomal protein L3-2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
E5GC40	6.2e-154	84.92	50S ribosomal protein l3 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3AYD1	6.2e-154	84.92	50S ribosomal protein L3-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10348392...	[more]

BLAST of Moc05g07660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17465.1	9.8e-136	75.77	ribosomal protein L3 plastid	[more]
AT2G43030.1	1.6e-37	41.75	Ribosomal protein L3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 200..284 e-value: 3.4E-27 score: 96.8
None	No IPR available	GENE3D	3.30.160.810		coord: 107..170 e-value: 8.7E-23 score: 82.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..241
None	No IPR available	PANTHER	PTHR11229:SF15	BNAA01G27990D PROTEIN	coord: 1..321
IPR000597	Ribosomal protein L3	PFAM	PF00297	Ribosomal_L3	coord: 173..256 e-value: 5.3E-19 score: 68.4
IPR019927	Ribosomal protein L3, bacterial/organelle-type	TIGRFAM	TIGR03625	TIGR03625	coord: 77..278 e-value: 3.4E-77 score: 256.8
IPR019927	Ribosomal protein L3, bacterial/organelle-type	PANTHER	PTHR11229	50S RIBOSOMAL PROTEIN L3	coord: 1..321
IPR019927	Ribosomal protein L3, bacterial/organelle-type	HAMAP	MF_01325_B	Ribosomal_L3_B	coord: 75..281 score: 34.444241
IPR019926	Ribosomal protein L3, conserved site	PROSITE	PS00474	RIBOSOMAL_L3	coord: 175..198
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 65..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g07660.1	Moc05g07660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome