Moc05g06770 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g06770
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	translocator protein homolog
Location	chr5: 4771278 .. 4773712 (+)
RNA-Seq Expression	Moc05g06770
Synteny	Moc05g06770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTCATCGTTCAACAATGTCGCTGGAGAGGCCACCAGGGAGACGCAAGAGCTCGGGATGGAAGCAGCGGACGACAACCGAACGGGACTTCCACTCGTTGAATTCCTAGCAGAGACGCCAAAAACTGGTGTGTGTTGTGTAGAAATCATGGAGAAGATCAAACAAATCTAAGAAATGGAGGAGAGAGGAGGGGAGAGAAGAGAGATGGAGTCTGGAAGAGAAAAAAAAGTAAGGAGGGACATGAAATATCATTTCACACAAGTATGTGATGTCAGCAGTGACTAGAAAACTAGTGTTTTGAAGAGGGCGATTAGAAAACTTAAGAGACACCTACAGAACGCTTATTTTGTCAATTTTCCCAAATATTTTTGTCATATTTACAACTGTCCCTAATTTATAAAAATAAACATAATAAGAGAATTTGATATTTTTTAGTACAAATATATAGATATAGGAATTCAAACTCATAACCTTTTGATTGAGATTGGTACTTCGATATTAATTGAAATATCATAAATTCGGTAGTATGTAACGTCAATTCGTCAAGTATGACCAATTTTTTCTTGTAGCAACGAATGGTTGGGACAAATTTACTTTGCGCGATTTAAAATTGAGGTAATTACATAAATGTCTTATAAATATGTGATTTTAAATATAGTAAAAAGTTTAAAATTTTACAAAAATAGTATAATCAAACAATAAAGTAAAACTCAAATATGATGTAAAATAGAACTCAAATATTAGGTAAAATATACAAAAATGTATGCTACAGCCTATAGTTGAGTGAAAATTCTCTTTACAAATTTCATATTGCCAAATGAACCAACAACGGTTGGATATTGAGTTCACATAAATATTTTAAAAAAAATGTGGGGCCTTTCGTATGTGTTAGATTATAAAATTTAATCTTTGAACAATGGATCATATTTTCTATTTAATGTATGAGTTTTGAATTATACTTTTATTTAATCATTATTATTAAAGTTTATTAGCATGGTGACACTTGGATCATTTTAGTTCCTGTACTTTTAACTTTAGTTCATTTTGACTCTCGTATTTTCAAATGTTCGTTTTAGTCCATATCCTTTTAAAAAGTAACTATTTTAGGGTCCCTTAATTTCATATTTTAATCTCTATTTTTCTATCACAATTTTAGCATGACACTATACTCAACAAATCTCTTAAAATGTAACGACTTTATACTAAAAAGTTCTTATTATGTGTAGAATTTATATTAAAATTTTAAAAATACGGACCAAAACGAATATTTTGAAGGTAGAATGACTAAAATGAACTAAAGTTAAAAGTACAATAACCAAACTAGTATTTTTAACTTTTATAATTTAAAGATAGACTCACTACATGTTTTGGTTTATAATATTTGGGCATTGTTTCAATATGTACCTTCATTTTTTAAGAGTGAACCGAAGATTTGAACCCTCAGCTTAAAGAAATGAATAAATGTATAAGCTATCCTCATATTCAGACATCAAAATTTTTATTGCTATAAAAAGTTAAACCACTAAAATTATTCGGAATACCGTCCTAAAAGTTACTATTTTTAAATTTTCAGAGCATCATTCTTTTGATTCCTTGGTAATTGGTTAAAAATTGAAATTGTAAAAAAATTGGGGACTAAATTGAAAAGCCACTCAAATAAAATTGTGGCGGATATGAATTGTTCAAAGGAAATCGCGCGGCATGCAACGGATGATCCTTCTGAAACCACCTGAAGGCTGAATTTCCTCTGTAACGTTCAATCTTCCTTTAATTTCTCCAAATTTATTACCTCTCTCTCTCTCTCTCTCTTCTTCTTCCGCCCCTTCGCCTTGCCCTAATCTTCAGTTCAATCCTCTCGATCGGAATCCCAATCGTCTCTCAAAATTCAGAGATCACAGATCGGAGATCAGAGATTAACAATGTCTTCCAGTCCGCCTTTCAAATCCAGGCCAGAATCCAAGTACACCAAGGCCAAGAGGGCGCTCCGGTCCCTCGCCGTCTCCGTCGCCATTCCCCTGTCTCTCACCATCACCGTCATCTTCCTCTTCGGCTCCGGCCGCCATTTCCCCAATCGGAGCCGCCCGGTGTGGATGGCGCCGCTCTGGTTCCTCCATCTATCGTCGATCGGCTCCTCCTTCCTGATCGGGCTCTCCGCCTGGCTCGTGTGGGCCGACGGCGGATTTCACGGCAATTCCACCGCCCTGCCGCTCTACATCGCGCATCTCGCCCTCAGCGTCGTCTGGAATCCTCTGGTACTCGTGATTCGCGCCGTTCTGCTTGCGTTTCTGTTCTGTGTTTTGGATTTCATTACTCTGTTTGCCTGTTATCGGAGCTTCAAGCGAGTGAATCCGTTCGCTAAGGATCTTATTAAGCCCTGTTTGGCTTCCACTGCGTATCTCTCTGCAGTCACTTACGTGTTGATTCATCTTTGA

mRNA sequence

ATGTTGTCATCGTTCAACAATGTCGCTGGAGAGGCCACCAGGGAGACGCAAGAGCTCGGGATGGAAGCAGCGGACGACAACCGAACGGGACTTCCACTCGTTGAATTCCTAGCAGAGACGCCAAAAACTGTTCAATCCTCTCGATCGGAATCCCAATCGTCTCTCAAAATTCAGAGATCACAGATCGGAGATCAGAGATTAACAATGTCTTCCAGTCCGCCTTTCAAATCCAGGCCAGAATCCAAGTACACCAAGGCCAAGAGGGCGCTCCGGTCCCTCGCCGTCTCCGTCGCCATTCCCCTGTCTCTCACCATCACCGTCATCTTCCTCTTCGGCTCCGGCCGCCATTTCCCCAATCGGAGCCGCCCGGTGTGGATGGCGCCGCTCTGGTTCCTCCATCTATCGTCGATCGGCTCCTCCTTCCTGATCGGGCTCTCCGCCTGGCTCGTGTGGGCCGACGGCGGATTTCACGGCAATTCCACCGCCCTGCCGCTCTACATCGCGCATCTCGCCCTCAGCGTCGTCTGGAATCCTCTGGTACTCGTGATTCGCGCCGTTCTGCTTGCGTTTCTGTTCTGTGTTTTGGATTTCATTACTCTGTTTGCCTGTTATCGGAGCTTCAAGCGAGTGAATCCGTTCGCTAAGGATCTTATTAAGCCCTGTTTGGCTTCCACTGCGTATCTCTCTGCAGTCACTTACGTGTTGATTCATCTTTGA

Coding sequence (CDS)

ATGTTGTCATCGTTCAACAATGTCGCTGGAGAGGCCACCAGGGAGACGCAAGAGCTCGGGATGGAAGCAGCGGACGACAACCGAACGGGACTTCCACTCGTTGAATTCCTAGCAGAGACGCCAAAAACTGTTCAATCCTCTCGATCGGAATCCCAATCGTCTCTCAAAATTCAGAGATCACAGATCGGAGATCAGAGATTAACAATGTCTTCCAGTCCGCCTTTCAAATCCAGGCCAGAATCCAAGTACACCAAGGCCAAGAGGGCGCTCCGGTCCCTCGCCGTCTCCGTCGCCATTCCCCTGTCTCTCACCATCACCGTCATCTTCCTCTTCGGCTCCGGCCGCCATTTCCCCAATCGGAGCCGCCCGGTGTGGATGGCGCCGCTCTGGTTCCTCCATCTATCGTCGATCGGCTCCTCCTTCCTGATCGGGCTCTCCGCCTGGCTCGTGTGGGCCGACGGCGGATTTCACGGCAATTCCACCGCCCTGCCGCTCTACATCGCGCATCTCGCCCTCAGCGTCGTCTGGAATCCTCTGGTACTCGTGATTCGCGCCGTTCTGCTTGCGTTTCTGTTCTGTGTTTTGGATTTCATTACTCTGTTTGCCTGTTATCGGAGCTTCAAGCGAGTGAATCCGTTCGCTAAGGATCTTATTAAGCCCTGTTTGGCTTCCACTGCGTATCTCTCTGCAGTCACTTACGTGTTGATTCATCTTTGA

Protein sequence

MLSSFNNVAGEATRETQELGMEAADDNRTGLPLVEFLAETPKTVQSSRSESQSSLKIQRSQIGDQRLTMSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAPLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL

Homology

[Close]

BLAST of Moc05g06770 vs. NCBI nr
Match: XP_022138228.1 (translocator protein homolog [Momordica charantia])

HSP 1 Score: 331.6 bits (849), Expect = 5.4e-87
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 69  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAP 128
           MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAP
Sbjct: 1   MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAP 60

Query: 129 LWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLL 188
           LWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLL
Sbjct: 61  LWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLL 120

Query: 189 AFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 239
           AFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
Sbjct: 121 AFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 170

[Close]

BLAST of Moc05g06770 vs. NCBI nr
Match: XP_038878873.1 (translocator protein homolog [Benincasa hispida])

HSP 1 Score: 294.7 bits (753), Expect = 7.3e-76
Identity = 150/170 (88.24%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 70  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAP 129
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIPLSLTI VIFLFG S RHFPNR+RP+W+ P
Sbjct: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSARHFPNRNRPIWIGP 62

Query: 130 LWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLL 189
           LW LHLSSIGSSFLIGL+AWLVWADGGFHG S ALPLYIAHL+LSVVWNPLVLVIR+V+L
Sbjct: 63  LWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVVL 122

Query: 190 AFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 239
           AFLFCVLDF+TLFACYR+FKRVNPFAKDLIKPCLA TAYLSAVTYV I L
Sbjct: 123 AFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL 172

[Close]

BLAST of Moc05g06770 vs. NCBI nr
Match: XP_022973726.1 (translocator protein homolog [Cucurbita maxima] >XP_022975172.1 translocator protein homolog [Cucurbita maxima])

HSP 1 Score: 290.4 bits (742), Expect = 1.4e-74
Identity = 149/171 (87.13%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 69  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMA 128
           MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPL+LTI VIFLFG S RHFPNR+RP+W+A
Sbjct: 1   MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVA 60

Query: 129 PLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVL 188
           PLW LHLSSI SSFLIGL+AWLVWADGGFH  S ALPLYIAHL+LSVVWNPLVLVIRA+L
Sbjct: 61  PLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRALL 120

Query: 189 LAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 239
           LAFLFCVLDF+TL+ACYR+FKRVNPFAKDLIKPCLA TAYL AVTYV I L
Sbjct: 121 LAFLFCVLDFVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 171

[Close]

BLAST of Moc05g06770 vs. NCBI nr
Match: XP_023540366.1 (translocator protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.0 bits (741), Expect = 1.8e-74
Identity = 149/172 (86.63%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 68  TMSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWM 127
           TMSSSPPFKSRPESKYTKAKRALRSLAVSVAIPL+LTI VIFLFG S RHFPNR+RP+W+
Sbjct: 55  TMSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWV 114

Query: 128 APLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAV 187
           APLW LHLSSI SSFLIGL+AWLVWADGGFH  S ALPLYIAHL+LSVVWNPLVLVIRA+
Sbjct: 115 APLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRAL 174

Query: 188 LLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 239
           LLAFLFCVLD +TL+ACYR+FKRVNPFAKDLIKPCLA TAYL AVTYV I L
Sbjct: 175 LLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 226

[Close]

BLAST of Moc05g06770 vs. NCBI nr
Match: XP_022945022.1 (translocator protein homolog [Cucurbita moschata])

HSP 1 Score: 288.5 bits (737), Expect = 5.3e-74
Identity = 149/172 (86.63%), Postives = 158/172 (91.86%), Query Frame = 0


Query: 68  TMSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWM 127
           TMSSSPPFKSRPESKYTKAKRALRSLAVSVAIPL+LTI VIFLFG S RHFPNR+RP+W+
Sbjct: 55  TMSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWV 114

Query: 128 APLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAV 187
           APLW LHLSSI SSFLIGL+AWLVWADGGFH  S ALPLYIAHL+LSVVWNPLVLVIRA 
Sbjct: 115 APLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRAR 174

Query: 188 LLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 239
           LLAFLFCVLD +TL+ACYR+FKRVNPFAKDLIKPCLA TAYL AVTYV I L
Sbjct: 175 LLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 226

[Close]

BLAST of Moc05g06770 vs. ExPASy Swiss-Prot
Match: O82245 (Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 63/161 (39.13%), Postives = 97/161 (60.25%), Query Frame = 0


Query: 76  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSR-PVWMAPLWFLHL 135
           K + + K   AKR L+SL V+VA P+ +T+   +  G+   + NR++   W+ PLW LH 
Sbjct: 33  KGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGNRAKSSSWIPPLWLLHT 92

Query: 136 SSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLLAFLFCV 195
           + + SS L+GL+AWLVW DGGFH    AL LY+A   L +VW+P+   + + +      +
Sbjct: 93  TCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWL 152

Query: 196 LDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVL 236
                LF CY++F  ++P A +L+KPCLA  A+++AV   L
Sbjct: 153 GQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAVNVKL 193

[Close]

BLAST of Moc05g06770 vs. ExPASy TrEMBL
Match: A0A6J1CCG7 (translocator protein homolog OS=Momordica charantia OX=3673 GN=LOC111009451 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.6e-87
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 69  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAP 128
           MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAP
Sbjct: 1   MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSRPVWMAP 60

Query: 129 LWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLL 188
           LWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLL
Sbjct: 61  LWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLL 120

Query: 189 AFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 239
           AFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL
Sbjct: 121 AFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 170

[Close]

BLAST of Moc05g06770 vs. ExPASy TrEMBL
Match: A0A6J1ICB9 (translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474208 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 6.7e-75
Identity = 149/171 (87.13%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 69  MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMA 128
           MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPL+LTI VIFLFG S RHFPNR+RP+W+A
Sbjct: 1   MSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVA 60

Query: 129 PLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVL 188
           PLW LHLSSI SSFLIGL+AWLVWADGGFH  S ALPLYIAHL+LSVVWNPLVLVIRA+L
Sbjct: 61  PLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRALL 120

Query: 189 LAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 239
           LAFLFCVLDF+TL+ACYR+FKRVNPFAKDLIKPCLA TAYL AVTYV I L
Sbjct: 121 LAFLFCVLDFVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 171

[Close]

BLAST of Moc05g06770 vs. ExPASy TrEMBL
Match: A0A6J1FZS9 (translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111449384 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.5e-74
Identity = 149/172 (86.63%), Postives = 158/172 (91.86%), Query Frame = 0


Query: 68  TMSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWM 127
           TMSSSPPFKSRPESKYTKAKRALRSLAVSVAIPL+LTI VIFLFG S RHFPNR+RP+W+
Sbjct: 55  TMSSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWV 114

Query: 128 APLWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAV 187
           APLW LHLSSI SSFLIGL+AWLVWADGGFH  S ALPLYIAHL+LSVVWNPLVLVIRA 
Sbjct: 115 APLWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRAR 174

Query: 188 LLAFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 239
           LLAFLFCVLD +TL+ACYR+FKRVNPFAKDLIKPCLA TAYL AVTYV I L
Sbjct: 175 LLAFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 226

[Close]

BLAST of Moc05g06770 vs. ExPASy TrEMBL
Match: A0A5D3CWC4 (Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001010 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.3e-74
Identity = 144/170 (84.71%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 70  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAP 129
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIP+SLTI VIFLFG S RHFPNR+RP+W+ P
Sbjct: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGP 62

Query: 130 LWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLL 189
           LW L LSSIGSSFL+GL+AWLVWADGGFHG S ALPLYIAHL+LSVVW+PLVLVIR+V++
Sbjct: 63  LWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVI 122

Query: 190 AFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 239
           AFLFCVLDF+TLFACYR+F+RVNPFAKDL+KPCLA TAYLSAVTYV IHL
Sbjct: 123 AFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of Moc05g06770 vs. ExPASy TrEMBL
Match: A0A1S4DTF2 (translocator protein homolog OS=Cucumis melo OX=3656 GN=LOC107990392 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.3e-74
Identity = 144/170 (84.71%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 70  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFG-SGRHFPNRSRPVWMAP 129
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIP+SLTI VIFLFG S RHFPNR+RP+W+ P
Sbjct: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWIGP 62

Query: 130 LWFLHLSSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLL 189
           LW L LSSIGSSFL+GL+AWLVWADGGFHG S ALPLYIAHL+LSVVW+PLVLVIR+V++
Sbjct: 63  LWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSVVI 122

Query: 190 AFLFCVLDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVLIHL 239
           AFLFCVLDF+TLFACYR+F+RVNPFAKDL+KPCLA TAYLSAVTYV IHL
Sbjct: 123 AFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of Moc05g06770 vs. TAIR 10
Match: AT2G47770.1 (TSPO(outer membrane tryptophan-rich sensory protein)-related )

HSP 1 Score: 121.7 bits (304), Expect = 7.9e-28
Identity = 63/161 (39.13%), Postives = 97/161 (60.25%), Query Frame = 0


Query: 76  KSRPESKYTKAKRALRSLAVSVAIPLSLTITVIFLFGSGRHFPNRSR-PVWMAPLWFLHL 135
           K + + K   AKR L+SL V+VA P+ +T+   +  G+   + NR++   W+ PLW LH 
Sbjct: 33  KGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGNRAKSSSWIPPLWLLHT 92

Query: 136 SSIGSSFLIGLSAWLVWADGGFHGNSTALPLYIAHLALSVVWNPLVLVIRAVLLAFLFCV 195
           + + SS L+GL+AWLVW DGGFH    AL LY+A   L +VW+P+   + + +      +
Sbjct: 93  TCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWL 152

Query: 196 LDFITLFACYRSFKRVNPFAKDLIKPCLASTAYLSAVTYVL 236
                LF CY++F  ++P A +L+KPCLA  A+++AV   L
Sbjct: 153 GQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAVNVKL 193

The following BLAST results are available for this feature:

BLAST of Moc05g06770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138228.1	5.4e-87	100.00	translocator protein homolog [Momordica charantia]	[more]
XP_038878873.1	7.3e-76	88.24	translocator protein homolog [Benincasa hispida]	[more]
XP_022973726.1	1.4e-74	87.13	translocator protein homolog [Cucurbita maxima] >XP_022975172.1 translocator pro...	[more]
XP_023540366.1	1.8e-74	86.63	translocator protein homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022945022.1	5.3e-74	86.63	translocator protein homolog [Cucurbita moschata]	[more]

BLAST of Moc05g06770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82245	1.1e-26	39.13	Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1	[more]

BLAST of Moc05g06770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCG7	2.6e-87	100.00	translocator protein homolog OS=Momordica charantia OX=3673 GN=LOC111009451 PE=3...	[more]
A0A6J1ICB9	6.7e-75	87.13	translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474208 PE=3 SV...	[more]
A0A6J1FZS9	2.5e-74	86.63	translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111449384 PE=3 ...	[more]
A0A5D3CWC4	3.3e-74	84.71	Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4DTF2	3.3e-74	84.71	translocator protein homolog OS=Cucumis melo OX=3656 GN=LOC107990392 PE=3 SV=1	[more]

BLAST of Moc05g06770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47770.1	7.9e-28	39.13	TSPO(outer membrane tryptophan-rich sensory protein)-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038330	TspO/MBR-related superfamily	GENE3D	1.20.1260.100	TspO/MBR protein	coord: 87..238 e-value: 4.0E-17 score: 64.2
IPR004307	TspO/MBR-related protein	PFAM	PF03073	TspO_MBR	coord: 96..234 e-value: 3.0E-16 score: 59.7
IPR004307	TspO/MBR-related protein	PANTHER	PTHR10057	PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR	coord: 71..237
IPR004307	TspO/MBR-related protein	CDD	cd15904	TSPO_MBR	coord: 93..233 e-value: 5.40961E-24 score: 91.4044
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR10057:SF6	TSPO/MBR FAMILY PROTEIN	coord: 71..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g06770.1	Moc05g06770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane