Moc05g06480 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g06480
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	F-box-like domain-containing protein
Location	chr5: 4515995 .. 4518554 (-)
RNA-Seq Expression	Moc05g06480
Synteny	Moc05g06480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTTCTCCATCTTCCCATTGACGTTGCCCTGAAAATTGCTTCTTCCCTCCAGGTTCCAATGGAGTTTTGTATAATCATGATCTTTTTGTTTTACTGGAATATTGTCTCGGGATTAATTGATTTTTCTCTGTCGATTTTGGGGCTGCGACCGGGAATAATGGTGCGAAGGCATCGGACATTTGTGCTTTGGCCTGTTGCTCGCGGTTGTGTAGGGAAATCTGCGATCTCGATTGTCTGTGGGAATCTCTGGCGAGAGAGAGATGGCCGTATATCAATGCTTCTTCGTCTTCTGGTTCGTCTTCATCAACTCTCGCGAAGCCTCCCATCTCCACGGTGCTCTTTCCATTGTCTTAATCTCCTTTTATTTGCGATCCTTTTCAATTGAGTTTATTATTTCCTCTCTTGGGTGAACAATTAACTTGTTTAGGAACAATTAACTTGTTTAGTATTTTTAGTTCTTTTTTTATTCCTAAATTAATTGAGAGATTTGAAAACTTGTATTGTTCTTTCTGTCTCATCATTCAAATGTAGTTGATTCGCACAAGCCCTTTCAAAATTTCCCCGCCCTTATCTGAAATGGTTGATTTTAAGGTTTTTCTGTTTCATTCGTGAATTTACGTGTTCAGTATTTTTAGCTTTTTGAAGCAATTAAGAGATTTGAAAGCTTGCTTTGTTCTTTCTGTCTGAAACATACATTGGATATCTAATATATCTAGAGTTCTGTCTCATTCGTGAATCTTGGATTTGATTCTTTGTTGTTAAAGTCGTCATATTCTGTTAGTGAACATAAGAAAATTGAAATGCCTTACAGGGATGGAGAAACTTTTACATCCGGAAGCATATTGAGATATCAGGAAAAGCTAAAGCAGCTGTCAAGTTTATAGAACAATGTTCTCCTTCGACCCCGATCGAGGCTGGAGACTATCATAGAGCAATTGCAGGCTTGTGGGATTTGAAGCTCAGTTTTGTAGATGTTCAAATGGTGCTTTTCAAACCCCAGCTTAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTAAAAATTGGCTTCAAGTCCCTGTACGTGCTGCTGCTTTTGCCATTTTAGTTCAACCATTTGTAGATTTTTTGGGTTCTAATCTAATCATTTAGATATAAATCATAATTTAGTCCTAAACTTTCATCCGTATTTCATTCTATTCCATTAGACTTTCAAATGCTTTTTTATGGTCCCTTTCATCAATCATTTAACTAAAAAGTCCAAATATGTTTGAACTAAAGTGATTTCTTTGCAAATTTTAGGGATTAAAATAGAATGTTTGAGAAGTTTAAAGATGAAAGTATAACAAGTATAAGAATTCCGAGATCAAAATAGGATTTAACCTAGTTATTTTATCTCTTGTAGGTGAGAGGGGTTGGGATGTTTGTTTATTGGTAGGAGCTTTTGAATAAGAGATGGATGGACCTTTTGGCCTGGTATTAAATACTTATGATTTAATTTACAAATACAGTATGCAAGACTCCAGCTTACAAATTCGAAGCCGAAACCTATGGTATTAAATACCTATGATTTGTTTTACTATCAAATACAGTATCCAAGAGTCTAGCTTACAAGTTTGAAGCCGAAGAACGCAGATGAAATATAGCAGTTAGAAAATTTTTTAGTAATAAAACAAAAACAGGTATAGATGAAAGGCTCTGCAAACCGTATAGGATTATTAGGCTTAGGATCACAGTTTATTTTGTATATCATGCATCTGAAATTGTTGAGTTGAGTTGATATTCAGCTTCTGGCAGGCAAATCAAGTCATGGAAGCACTTCTAAGTCACAAGATTTCAGAGAAGCATGTATATGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGCATGAGAGACGAACATCAGACTCGTCGAGTCTCTCTGGCCGAACTTATAGCCGCAGAAGGGGAGGATATTCTCGGGGTGCTTAGCCGAGGTGCTGTTCACGAGGTACTCCGGGTTCAGATTGCTGCAGGTGATCCCTTTTGCAGTCACTGGTCTCAACAAGGCACACAATAAGCACCCTTAGCATCTCTATAAGCATTCTGCAACTGCAATGATCTGTGTGCTGATAGTTCATGCATTTCATATAATTGCTTGTAAATTAATGTAGATATAAAAATGTAATATATTTGTTGGATATTCAGAGTTGATATCAAATATATATAATATAAGGTTGTAATTCACCAAGATATGCACATTAATTTGTTTATTTTGGTATGTAAGCATGGGGTTCAAGAGATTGGATTTTACAATTTTCATAATTTCTCACAAATCTTACCCTAATTTCTCTCTTCTTTTTGTGTCTAGAACCTATTTGTTGTGCACCGTAGAAATAACATTTTGTTCCAAACAAACTTGTTCCTTAACTTTTCATTCTTAAGCATCCTTTTCTATGCCAGCTTACCAATATCCCTTGAGGAATTTTAATTATGTGTTATGTCGTATGAACAAGATTTCTGTAGGTATTATTTTTAAATATATTGGTTTAGTGAATTTGCTATTGCAGCTGCCTTTGAATGCATAA

mRNA sequence

ATGGGGTTTCTCCATCTTCCCATTGACGTTGCCCTGAAAATTGCTTCTTCCCTCCAGGCATCGGACATTTGTGCTTTGGCCTGTTGCTCGCGGTTGTGTAGGGAAATCTGCGATCTCGATTGTCTGTGGGAATCTCTGGCGAGAGAGAGATGGCCGTATATCAATGCTTCTTCGTCTTCTGGTTCGTCTTCATCAACTCTCGCGAAGCCTCCCATCTCCACGGGATGGAGAAACTTTTACATCCGGAAGCATATTGAGATATCAGGAAAAGCTAAAGCAGCTGTCAAGTTTATAGAACAATGTTCTCCTTCGACCCCGATCGAGGCTGGAGACTATCATAGAGCAATTGCAGGCTTGTGGGATTTGAAGCTCAGTTTTGTAGATGTTCAAATGGTGCTTTTCAAACCCCAGCTTAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTAAAAATTGGCTTCAAGTCCCTGCAAATCAAGTCATGGAAGCACTTCTAAGTCACAAGATTTCAGAGAAGCATGTATATGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGCATGAGAGACGAACATCAGACTCGTCGAGTCTCTCTGGCCGAACTTATAGCCGCAGAAGGGGAGGATATTCTCGGGGTGCTTAGCCGAGGTGCTGTTCACGAGGTACTCCGGGTTCAGATTGCTGCAGTGAATTTGCTATTGCAGCTGCCTTTGAATGCATAA

Coding sequence (CDS)

ATGGGGTTTCTCCATCTTCCCATTGACGTTGCCCTGAAAATTGCTTCTTCCCTCCAGGCATCGGACATTTGTGCTTTGGCCTGTTGCTCGCGGTTGTGTAGGGAAATCTGCGATCTCGATTGTCTGTGGGAATCTCTGGCGAGAGAGAGATGGCCGTATATCAATGCTTCTTCGTCTTCTGGTTCGTCTTCATCAACTCTCGCGAAGCCTCCCATCTCCACGGGATGGAGAAACTTTTACATCCGGAAGCATATTGAGATATCAGGAAAAGCTAAAGCAGCTGTCAAGTTTATAGAACAATGTTCTCCTTCGACCCCGATCGAGGCTGGAGACTATCATAGAGCAATTGCAGGCTTGTGGGATTTGAAGCTCAGTTTTGTAGATGTTCAAATGGTGCTTTTCAAACCCCAGCTTAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTAAAAATTGGCTTCAAGTCCCTGCAAATCAAGTCATGGAAGCACTTCTAAGTCACAAGATTTCAGAGAAGCATGTATATGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGCATGAGAGACGAACATCAGACTCGTCGAGTCTCTCTGGCCGAACTTATAGCCGCAGAAGGGGAGGATATTCTCGGGGTGCTTAGCCGAGGTGCTGTTCACGAGGTACTCCGGGTTCAGATTGCTGCAGTGAATTTGCTATTGCAGCTGCCTTTGAATGCATAA

Protein sequence

MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAAVNLLLQLPLNA

Homology

[Close]

BLAST of Moc05g06480 vs. NCBI nr
Match: XP_022137972.1 (uncharacterized protein LOC111009254 isoform X2 [Momordica charantia] >XP_022137973.1 uncharacterized protein LOC111009254 isoform X2 [Momordica charantia])

HSP 1 Score: 491.9 bits (1265), Expect = 3.2e-135
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60
           MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS
Sbjct: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60

Query: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120
           GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW
Sbjct: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120

Query: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180
           DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW
Sbjct: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180

Query: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAAVNLLLQLP 240
           KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAAVNLLLQLP
Sbjct: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAAVNLLLQLP 240

Query: 241 LNA 244
           LNA
Sbjct: 241 LNA 243

[Close]

BLAST of Moc05g06480 vs. NCBI nr
Match: XP_022137971.1 (uncharacterized protein LOC111009254 isoform X1 [Momordica charantia])

HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60
           MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS
Sbjct: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60

Query: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120
           GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW
Sbjct: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120

Query: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180
           DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW
Sbjct: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180

Query: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA 233
           KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
Sbjct: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA 232

[Close]

BLAST of Moc05g06480 vs. NCBI nr
Match: XP_022137975.1 (uncharacterized protein LOC111009254 isoform X3 [Momordica charantia] >XP_022137976.1 uncharacterized protein LOC111009254 isoform X3 [Momordica charantia])

HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60
           MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS
Sbjct: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60

Query: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120
           GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW
Sbjct: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120

Query: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180
           DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW
Sbjct: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180

Query: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA 233
           KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
Sbjct: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA 232

[Close]

BLAST of Moc05g06480 vs. NCBI nr
Match: XP_038893805.1 (uncharacterized protein LOC120082593 [Benincasa hispida])

HSP 1 Score: 380.9 bits (977), Expect = 8.0e-102
Identity = 182/232 (78.45%), Postives = 203/232 (87.50%), Query Frame = 0


Query: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60
           MG  HLPID ALKIASSLQASDIC+L CCSR CR++CD D LWESLARERWPYIN     
Sbjct: 1   MGLNHLPIDTALKIASSLQASDICSLGCCSRFCRQLCDSDYLWESLARERWPYIN----- 60

Query: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120
           GSS STLA+ PIS GW++ YI++HIEI G+A+AAVKFIEQCSPSTPIE GDY R I GLW
Sbjct: 61  GSSPSTLAQSPISMGWKSLYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLW 120

Query: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180
           DLKLSF+D QMVLFKPQLNELLNLVGLHYC+NWLQVPANQVMEAL   K++E+++ VKWW
Sbjct: 121 DLKLSFIDAQMVLFKPQLNELLNLVGLHYCRNWLQVPANQVMEALQRCKVAERYICVKWW 180

Query: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA 233
           KLGRWFYGFRMRDE QTRRVSLAEL+  EGED+LGVLSRGAVHEVLRVQ++A
Sbjct: 181 KLGRWFYGFRMRDEQQTRRVSLAELVTEEGEDVLGVLSRGAVHEVLRVQVSA 227

[Close]

BLAST of Moc05g06480 vs. NCBI nr
Match: KAG6597495.1 (hypothetical protein SDJN03_10675, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028954.1 hypothetical protein SDJN02_10137 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 378.6 bits (971), Expect = 3.9e-101
Identity = 187/231 (80.95%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60
           MG LHLP+DVALKIASSLQASDICAL CCSRLCREI D DCLWESLARERWPYI ASSS+
Sbjct: 1   MGLLHLPLDVALKIASSLQASDICALGCCSRLCREIFDSDCLWESLARERWPYIYASSST 60

Query: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120
           GSSSST AK PIS GW++FYI +HIEI G+A+AAVKFIEQC PSTPIE GDY R I GL 
Sbjct: 61  GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLR 120

Query: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180
           DLKLSF+DVQMVLFKPQLN LLNLVGLHYC N L++PA +VMEAL   KISEKH+ VKWW
Sbjct: 121 DLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHICVKWW 180

Query: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIA 232
           KLGRWFYGFRMRDE  TRRVSLAEL+ AEGED+LGVLSRG VHEVLRVQ++
Sbjct: 181 KLGRWFYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVS 231

[Close]

BLAST of Moc05g06480 vs. ExPASy TrEMBL
Match: A0A6J1CBT0 (uncharacterized protein LOC111009254 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009254 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 1.5e-135
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60
           MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS
Sbjct: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60

Query: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120
           GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW
Sbjct: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120

Query: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180
           DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW
Sbjct: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180

Query: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAAVNLLLQLP 240
           KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAAVNLLLQLP
Sbjct: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAAVNLLLQLP 240

Query: 241 LNA 244
           LNA
Sbjct: 241 LNA 243

[Close]

BLAST of Moc05g06480 vs. ExPASy TrEMBL
Match: A0A6J1C8B4 (uncharacterized protein LOC111009254 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111009254 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 5.7e-130
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60
           MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS
Sbjct: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60

Query: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120
           GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW
Sbjct: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120

Query: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180
           DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW
Sbjct: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180

Query: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA 233
           KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
Sbjct: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA 232

[Close]

BLAST of Moc05g06480 vs. ExPASy TrEMBL
Match: A0A6J1C8B1 (uncharacterized protein LOC111009254 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009254 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 5.7e-130
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60
           MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS
Sbjct: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60

Query: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120
           GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW
Sbjct: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120

Query: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180
           DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW
Sbjct: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180

Query: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA 233
           KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
Sbjct: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAA 232

[Close]

BLAST of Moc05g06480 vs. ExPASy TrEMBL
Match: A0A6J1GE44 (uncharacterized protein LOC111453355 OS=Cucurbita moschata OX=3662 GN=LOC111453355 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.5e-101
Identity = 186/231 (80.52%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60
           MG LHLP+DVALKIASSLQASDICAL CCSRLCRE+ D DCLWESLARERWPYI ASSS+
Sbjct: 1   MGLLHLPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSST 60

Query: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120
           GSSSST AK PIS GW++FYI +HIEI G+A+AAVKFIEQC PSTPIE GDY R I GL 
Sbjct: 61  GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLR 120

Query: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180
           DLKLSF+DVQMVLFKPQLN LLNLVGLHYC N L++PA +VMEAL   KISEKH+ VKWW
Sbjct: 121 DLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHICVKWW 180

Query: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIA 232
           KLGRWFYGFRMRDE  TRRVSLAEL+ AEGED+LGVLSRG VHEVLRVQ++
Sbjct: 181 KLGRWFYGFRMRDEQHTRRVSLAELVTAEGEDVLGVLSRGPVHEVLRVQVS 231

[Close]

BLAST of Moc05g06480 vs. ExPASy TrEMBL
Match: A0A5A7U795 (F-box-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00440 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.3e-101
Identity = 180/231 (77.92%), Postives = 202/231 (87.45%), Query Frame = 0


Query: 1   MGFLHLPIDVALKIASSLQASDICALACCSRLCREICDLDCLWESLARERWPYINASSSS 60
           MGF HLP D ALKIASSLQ S+IC+L CCSR CR++CD D LWESLARERWPYIN     
Sbjct: 1   MGFDHLPTDTALKIASSLQVSEICSLGCCSRFCRQLCDSDYLWESLARERWPYIN----- 60

Query: 61  GSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLW 120
           GSSSSTLA+ PIS GW++FYI++HIEI G+A+AAVKF+EQCSPSTPIE GDY R I GLW
Sbjct: 61  GSSSSTLAQSPISMGWKSFYIQRHIEILGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLW 120

Query: 121 DLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWW 180
           DLKLSFVD QMVLFKPQLNELLNLVGLHYC+ WLQVPANQ++EAL   KI+E+H+ VKWW
Sbjct: 121 DLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQVPANQILEALQRCKIAERHICVKWW 180

Query: 181 KLGRWFYGFRMRDEHQTRRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIA 232
           KLGRWFYGFRMRDE QTRRVSLAEL+  EGED+LGVLSRGAVHEVLRVQ++
Sbjct: 181 KLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVS 226

[Close]

BLAST of Moc05g06480 vs. TAIR 10
Match: AT4G15563.1 (unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 126.3 bits (316), Expect = 3.3e-29
Identity = 64/153 (41.83%), Postives = 97/153 (63.40%), Query Frame = 0


Query: 83  KHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELL 142
           +H E++ +A   +K++ +   +  +EAG Y  A+  +  ++  F DV++  FKP L+ LL
Sbjct: 2   QHKEMASRASEVIKYVTKSPATLSLEAGIYLHAVETMSSMRFGFQDVELFFFKPNLSVLL 61

Query: 143 NLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTRRVSL 202
           NL+GL YC   L+    QV++ L    ISE+ V+VKW  LGRW  G RMRD+  +R+VSL
Sbjct: 62  NLIGLIYCIQHLKPRREQVVDVLRQCGISEQLVWVKWLTLGRWSGGSRMRDDIVSRQVSL 121

Query: 203 AELIAAEGEDILGVLSRGAVHEVLRVQIAAVNL 236
            +++  + E +L VL RG VHEVLRV I+ V+L
Sbjct: 122 VDVVTGKEETVLRVLQRGVVHEVLRVCISTVDL 154

The following BLAST results are available for this feature:

BLAST of Moc05g06480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137972.1	3.2e-135	100.00	uncharacterized protein LOC111009254 isoform X2 [Momordica charantia] >XP_022137...	[more]
XP_022137971.1	1.2e-129	100.00	uncharacterized protein LOC111009254 isoform X1 [Momordica charantia]	[more]
XP_022137975.1	1.2e-129	100.00	uncharacterized protein LOC111009254 isoform X3 [Momordica charantia] >XP_022137...	[more]
XP_038893805.1	8.0e-102	78.45	uncharacterized protein LOC120082593 [Benincasa hispida]	[more]
KAG6597495.1	3.9e-101	80.95	hypothetical protein SDJN03_10675, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc05g06480 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g06480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBT0	1.5e-135	100.00	uncharacterized protein LOC111009254 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C8B4	5.7e-130	100.00	uncharacterized protein LOC111009254 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C8B1	5.7e-130	100.00	uncharacterized protein LOC111009254 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1GE44	2.5e-101	80.52	uncharacterized protein LOC111453355 OS=Cucurbita moschata OX=3662 GN=LOC1114533...	[more]
A0A5A7U795	4.3e-101	77.92	F-box-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Moc05g06480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15563.1	3.3e-29	41.83	unknown protein; Has 36 Blast hits to 36 proteins in 12 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 6..46 e-value: 0.0017 score: 27.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 3..44 e-value: 4.8E-8 score: 32.7
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..46 score: 8.914593
None	No IPR available	GENE3D	1.20.1280.50		coord: 2..88 e-value: 8.8E-9 score: 37.2
None	No IPR available	PANTHER	PTHR16008:SF4	F-BOX ONLY PROTEIN 4	coord: 3..235
IPR039588	F-box only protein 4	PANTHER	PTHR16008	F-BOX ONLY PROTEIN 4	coord: 3..235
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 3..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g06480.1	Moc05g06480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding