Moc05g05300 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g05300
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	meiotic recombination protein DMC1 homolog
Location	chr5: 3708795 .. 3712333 (+)
RNA-Seq Expression	Moc05g05300
Synteny	Moc05g05300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGCAACGCTTAAGTGAGTTTGAGATGATATCATTCTCGTTATCTTTTTTGAAATCCTGCCAAATTACTTTGGAATCATTTCGTCAAATTCTCTCTCATTATCCATCACTGATGTTGCTTCAGAGCGGAAGAACAAAGCCAACAACTACAGCTCGTTGAGCGCGAAGATATCGAGGATGAAGACGACTTGTTCGAAGCGATTGATAAACGTATGTTTCAGAGCTTTTAACTAATAACTAAGTTATCGTTTTGCTATTCAAAGAATTTCCTCGACGACGCTTGTTTCGCGAACTCAAACAGAACTTGATTTCATGACGTGGTGTGTTTAAGTGATTCGATAGTTGTCCGTGGAGTTTGATACGCAGAACTCCAATGTTGATCAATTTTCTTTTCCAGAAGAGAAATGAGATCACCTACCTTACTTTTCTAATGATTCGTTCATTCTCGAGATAGCTCGGCAGCTTTATTTTGTAATTGATTCACGATAGCAATGGCATCCGATTTAGCTATGTTTTATATATTATCGTTATCTATTTTCTTAAGACATGCAATTCTATGAGAGTTTTGCTAAATTCACCGAGGAAGTAGCACTAGTTTTAGCCACTTCACTGACGATCATATCGTTTCACTATCTCCGAAACTGTGGCATTGTTCTGTGCAGTGACTTCTCATGGAATCAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATCTACACGTGCAACGGTTTGATGATGCATACGAAGAAGGTAGAACAATTTTCACGTCAAATTCTATATATCCTGAATCTGATATGGTTATAGTGACAAGGATTTTGTATGTTAGCACTTGACCGGGATAAAAGGTTTATCTGAGGCAAAGGTTGACAAGATCTGTGAAGCTGCCGAAAAGCTAGTGGTCAGTCACCACTTCTATTATCCACGATGCGTTGAATTTCTTACACGATGCCATAATGCCAGACGTTTATGCTTTTCGTCAATTTACAATTATTACTTCTCTGTCGCTTTTCAGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAAGGTAAGTTGCTTCTGTTTTTTATTAGTAACAAAATGGAGTGCTTATTTCGAACCACATAGATCCATAGCTCACCAGAAAGTGTAGTTTGCATCGTCTCCTTTTTTCTGTTTTCGTTTTTTTTTTAGTTTTTTCCGCTTGCTATAAGTAGCTCGTATGAGTTCAATATATATTTTAGCAACCTACTGCCTGTCGTGAAATGCAGACTTACCGTGATTTTTGTTTGTAGAGAAAGTCTGTGGTTCGCATTACGACTGGAAGCCAGGCTCTCGATGAACTCTTAGGAGGCAAGTCCTGCTTTACGACATTATTTTTTTCACTGTCGCACGAATTATAAGCACTAAAGGAAATTTCTGTTTCTAATTCCTACCAAAAGGTGGTATTGAAACTCTAGCGATTACGGAAGCTTTTGGAGAATTTAGGTGAGGATGTATATGTTACAGTTACTTCCATTTTGTTTATTGAAAATCGAAGTCCTTCCGTAATTAATTTCCATGGTTCTCCTCTGACTTCGTTAAACGAATGCCTAGGTCCGGGAAAACGCAACTTGCGCATACTCTGTGCGTCTCTACGCAGGTTCATCTAAAGTTTCATTTGGTCGTTTACTGGGGTGTAACTTAGTCTTGATCTTTTTTTCGGTTCTCAGGTCGAAGACATTATAGTTATTAATAGAAATCGTTTTTACATCGTCAAAATCTAACTTGTACCTTTCACTCTCCTGCACCTACTATAAAGCTTACTCTTATTATTTTCCAGCGAAATTTAAGCGCTCATAGATGTTTATGGTATTAAAATTGAGATTGCATTTCAGAAGAGCTGGAAGTATTTAATTGTTGTTAGGCTTTACATCTGATCCTTAGGATTGAACACGGCTTATCTAATGCTATATTTCGTTACACATGCATTGAAAGAAAATTTAGGTTTAGCTCGTCTTTCTTATAAACCTCATAGCTACCGAGCGTTTCTTAAACTGCCTCAATCTGGTGGCATCTGAGTAATTGTGCTTGGCGCTTGCCTTCGCAGCTTCCTACCCACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAAGGAACTTTGTATCCTTTTTTGAAGCTTTTGTTAATTTACTTTTCATTTTTAAAATTACTGTCACGTATAATGAAATGATATTATTATCTTCGGAGATGCTCCCCTTCTCAATATGTCCTCTCCTTAACTACATGCACTTGCAGCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTACTTGACAATGTGAGCGCCACTATTTTGTATTGTAGCTTATACTTCCGACCAAAACTACCGGTTACAAATCTTTCATTAACATGCTGCTAATGAAATAGATCATATATGCTCGCGCCTACACTTATGAACATCAACATAACCTCCTGCTAGGCCTTGCCGCAAAAATGTCTGAAGAACCATTTAAACTTCTGGTGAGTCACCAGGAAACCTGTGACTCAAACGTACAAAATTGTGTCTGACGTACATTCGATCTCCTAATTTCAGATTGTTGACTCTATCATTGCTCTTTTTCGAGTGGATTTTACCGGAAGAGGAGAACTTGCAGAGCGCCAGGTCGAATCAAATAGAACTTTAGACAATCTTCAGAATTTGATTTCCCTAGCTAAGTATAATTTCTTGCTTAGTTTCATCATTGATGACACAAGCTAGTTTTCACATGCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAGGAGTTTAATGTAGCAGTTTACATGACTAACCAAGGTAGACATTGAACTTCATGGGAATGGCTTCCCCTGTTTCATCTGATCGTTTATCTCATTCAGAAAAACCATGGCCAGATTAAATGTTAACTCAATTCACCGCCTGAATTTTCTAACCTTGTTATTTCTCGTATTAGCATAATAGACTCTGACCGAACTCGTTTGCTGTGAGAACACTAAACTGATGTTTAATCATTCAAAATGCTAGCTACTGAACGCAATCGAATTGTTCACAACAGTGGTTGCAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCTCATGCTGCTACGGTAAGATTGATGTTCAGAAAAGGCAAAGGCGAACAACGCATCTGTAAGGTGTTCGATGCCCCTAATTTGCCAGAGTCTGAAGCTATATCCTTACCTCATTTCACATCACACTTTACACCTTCATTCATTATTTTCTGGTTAGTATAAACATCAATCCCACTGATCTCAACGATTTCGAAATCATCAAACTATGATGTAACCAGATATTCTACATTTCACCTCACTCATGATCCACACCAACATTGCACCTAACAATTATTGTAGAGAAAACAGAAAAGAAGGCTACCATTATCACACAAATTTTTCTTGACGGAAGCACGTATTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGACTGA

mRNA sequence

ATGCTCGCAACGCTTAAAGCGGAAGAACAAAGCCAACAACTACAGCTCGTTGAGCGCGAAGATATCGAGGATGAAGACGACTTGTTCGAAGCGATTGATAAACTGACTTCTCATGGAATCAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATCTACACGTGCAACGGTTTGATGATGCATACGAAGAAGCACTTGACCGGGATAAAAGGTTTATCTGAGGCAAAGGTTGACAAGATCTGTGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAAGCTTCCTACCCACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAAGGAACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTACTTGACAATATCATATATGCTCGCGCCTACACTTATGAACATCAACATAACCTCCTGCTAGGCCTTGCCGCAAAAATGTCTGAAGAACCATTTAAACTTCTGATTGTTGACTCTATCATTGCTCTTTTTCGAGTGGATTTTACCGGAAGAGGAGAACTTGCAGAGCGCCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAGGAGTTTAATGTAGCAGTTTACATGACTAACCAAGTGGTTGCAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCTCATGCTGCTACGATAACACCAGGGGGCATTGCAGATGCAAAGGACTGA

Coding sequence (CDS)

ATGCTCGCAACGCTTAAAGCGGAAGAACAAAGCCAACAACTACAGCTCGTTGAGCGCGAAGATATCGAGGATGAAGACGACTTGTTCGAAGCGATTGATAAACTGACTTCTCATGGAATCAATGCTGGAGACGTGAAGAAGCTTCAGGACGCAGGGATCTACACGTGCAACGGTTTGATGATGCATACGAAGAAGCACTTGACCGGGATAAAAGGTTTATCTGAGGCAAAGGTTGACAAGATCTGTGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGATGCTCTGCTCAAGCTTCCTACCCACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAAGGAACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTACTTGACAATATCATATATGCTCGCGCCTACACTTATGAACATCAACATAACCTCCTGCTAGGCCTTGCCGCAAAAATGTCTGAAGAACCATTTAAACTTCTGATTGTTGACTCTATCATTGCTCTTTTTCGAGTGGATTTTACCGGAAGAGGAGAACTTGCAGAGCGCCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAGGAGTTTAATGTAGCAGTTTACATGACTAACCAAGTGGTTGCAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCCAAAAAACCAGCAGGAGGCCACGTTCTTGCTCATGCTGCTACGATAACACCAGGGGGCATTGCAGATGCAAAGGACTGA

Protein sequence

MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKLPTHMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATITPGGIADAKD

Homology

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BLAST of Moc05g05300 vs. NCBI nr
Match: XP_022138203.1 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica charantia])

HSP 1 Score: 479.2 bits (1232), Expect = 2.3e-131
Identity = 264/354 (74.58%), Postives = 264/354 (74.58%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK                  
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPTHMRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

[Close]

BLAST of Moc05g05300 vs. NCBI nr
Match: XP_004134116.1 (meiotic recombination protein DMC1 homolog isoform X2 [Cucumis sativus] >XP_038878023.1 meiotic recombination protein DMC1 homolog [Benincasa hispida])

HSP 1 Score: 479.2 bits (1232), Expect = 2.3e-131
Identity = 263/345 (76.23%), Postives = 263/345 (76.23%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK                  
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

[Close]

BLAST of Moc05g05300 vs. NCBI nr
Match: XP_008438613.1 (PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis melo])

HSP 1 Score: 478.0 bits (1229), Expect = 5.2e-131
Identity = 262/345 (75.94%), Postives = 263/345 (76.23%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALLK                  
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

[Close]

BLAST of Moc05g05300 vs. NCBI nr
Match: XP_022947681.1 (meiotic recombination protein DMC1 homolog [Cucurbita moschata] >XP_022974437.1 meiotic recombination protein DMC1 homolog isoform X2 [Cucurbita maxima] >XP_023540848.1 meiotic recombination protein DMC1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.3 bits (1222), Expect = 3.4e-130
Identity = 259/345 (75.07%), Postives = 263/345 (76.23%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLKAEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                  
Sbjct: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELL 121

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 122 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 181

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELAERQQKLAQMLSRLTKIAEE+NVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301

[Close]

BLAST of Moc05g05300 vs. NCBI nr
Match: XP_031739053.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 4.4e-130
Identity = 252/304 (82.89%), Postives = 253/304 (83.22%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK                  
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 255
           GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

[Close]

BLAST of Moc05g05300 vs. ExPASy Swiss-Prot
Match: Q96449 (Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 2.2e-124
Identity = 243/345 (70.43%), Postives = 258/345 (74.78%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLK+EE S QLQLVEREDI+D++DLFEAIDKL + GINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKSEESSGQLQLVEREDIDDDEDLFEAIDKLIAQGINAGDVKKLQDAGIYTCNGLM 60

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKK+LTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK                  
Sbjct: 61  MHTKKNLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVIRITTGSQALDELL 120

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGVETSAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF+LLIVDS+IALFRVDF+
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFS 240

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQV++DPGGGVFV+DPKKPAGGHVLAH
Sbjct: 241 GRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVISDPGGGVFVTDPKKPAGGHVLAH 300

[Close]

BLAST of Moc05g05300 vs. ExPASy Swiss-Prot
Match: Q39009 (Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DMC1 PE=1 SV=2)

HSP 1 Score: 427.6 bits (1098), Expect = 1.1e-118
Identity = 232/345 (67.25%), Postives = 256/345 (74.20%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           M+A+LKAEE S Q+QLVERE+ ++++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLM
Sbjct: 1   MMASLKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLM 60

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKK+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSDAL+K                  
Sbjct: 61  MHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLL 120

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT+M+GGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVP 180

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFT 240

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAH
Sbjct: 241 GRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAH 300

[Close]

BLAST of Moc05g05300 vs. ExPASy Swiss-Prot
Match: P37384 (Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM15 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.7e-113
Identity = 225/338 (66.57%), Postives = 241/338 (71.30%), Query Frame = 0


Query: 9   EQSQQLQLVEREDI-EDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHL 68
           E   QLQL++R++  E+E+D FE+IDKL S GINAGDVKKLQDAGIYTCNGLMMHTKK+L
Sbjct: 12  ESPGQLQLLDRQEAEEEEEDCFESIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKNL 71

Query: 69  TGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------------- 128
           TGIKGLSEAKVDKICEAAEKLVN GYITGSD LLK                         
Sbjct: 72  TGIKGLSEAKVDKICEAAEKLVNVGYITGSDVLLKRKSVIRITTGSQALDELLGGGIETL 131

Query: 129 -------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVPIAERFGM 188
                                    LP  M GGNGKVAYIDTEGTFRPDRIVPIAERFGM
Sbjct: 132 QITEAFGEFRSGKTQIAHTLCVSTQLPVSMHGGNGKVAYIDTEGTFRPDRIVPIAERFGM 191

Query: 189 DPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAE 248
           D  AVLDNIIYARAYTYEHQ+NLLL LAAKMSEEPF+LLIVDS+IALFRVDF+GRGELAE
Sbjct: 192 DASAVLDNIIYARAYTYEHQYNLLLALAAKMSEEPFRLLIVDSVIALFRVDFSGRGELAE 251

Query: 249 RQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAAT---- 265
           RQQKLAQMLSRLTKIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAAT    
Sbjct: 252 RQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLM 311

[Close]

BLAST of Moc05g05300 vs. ExPASy Swiss-Prot
Match: Q7EAG4 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39946 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-110
Identity = 209/303 (68.98%), Postives = 235/303 (77.56%), Query Frame = 0


Query: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61
           +A  K  ++  QLQL++ E IE+E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMM
Sbjct: 1   MAPSKQYDEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMM 60

Query: 62  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------- 121
           HTKK LTGIKGLSEAKVDKICEAAEKL++ G++TGSD L+K                   
Sbjct: 61  HTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLG 120

Query: 122 -------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVPI 181
                                          LP HM GGNGKVAYIDTEGTFRP+RIVPI
Sbjct: 121 GGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPI 180

Query: 182 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 241
           AERFGMD  AVLDNIIYARAYTYEHQ+NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+G
Sbjct: 181 AERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSG 240

Query: 242 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 255
           RGELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHA
Sbjct: 241 RGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHA 300

[Close]

BLAST of Moc05g05300 vs. ExPASy Swiss-Prot
Match: Q7GBF7 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-110
Identity = 209/303 (68.98%), Postives = 235/303 (77.56%), Query Frame = 0


Query: 2   LATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 61
           +A  K  ++  QLQL++ E IE+E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMM
Sbjct: 1   MAPSKQYDEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMM 60

Query: 62  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------- 121
           HTKK LTGIKGLSEAKVDKICEAAEKL++ G++TGSD L+K                   
Sbjct: 61  HTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLG 120

Query: 122 -------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVPI 181
                                          LP HM GGNGKVAYIDTEGTFRP+RIVPI
Sbjct: 121 GGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPI 180

Query: 182 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 241
           AERFGMD  AVLDNIIYARAYTYEHQ+NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+G
Sbjct: 181 AERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSG 240

Query: 242 RGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 255
           RGELAERQQKLAQMLSRLTKIAEEFNVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHA
Sbjct: 241 RGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHA 300

[Close]

BLAST of Moc05g05300 vs. ExPASy TrEMBL
Match: A0A6J1CCE5 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica charantia OX=3673 GN=LOC111009434 PE=3 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.1e-131
Identity = 264/354 (74.58%), Postives = 264/354 (74.58%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK                  
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPTHMRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

[Close]

BLAST of Moc05g05300 vs. ExPASy TrEMBL
Match: A0A1S3AXH2 (meiotic recombination protein DMC1 homolog OS=Cucumis melo OX=3656 GN=LOC103483670 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.5e-131
Identity = 262/345 (75.94%), Postives = 263/345 (76.23%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALLK                  
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

[Close]

BLAST of Moc05g05300 vs. ExPASy TrEMBL
Match: A0A6J1IA86 (meiotic recombination protein DMC1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473101 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.6e-130
Identity = 259/345 (75.07%), Postives = 263/345 (76.23%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLKAEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                  
Sbjct: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELL 121

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 122 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 181

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELAERQQKLAQMLSRLTKIAEE+NVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301

[Close]

BLAST of Moc05g05300 vs. ExPASy TrEMBL
Match: A0A6J1G745 (meiotic recombination protein DMC1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111451472 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.6e-130
Identity = 259/345 (75.07%), Postives = 263/345 (76.23%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLKAEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+                  
Sbjct: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELL 121

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 122 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 181

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELAERQQKLAQMLSRLTKIAEE+NVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301

[Close]

BLAST of Moc05g05300 vs. ExPASy TrEMBL
Match: A0A5D3D096 (Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00830 PE=3 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.7e-130
Identity = 251/304 (82.57%), Postives = 253/304 (83.22%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSDALLK                  
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 255
           GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

[Close]

BLAST of Moc05g05300 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 427.6 bits (1098), Expect = 7.5e-120
Identity = 232/345 (67.25%), Postives = 256/345 (74.20%), Query Frame = 0


Query: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60
           M+A+LKAEE S Q+QLVERE+ ++++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLM
Sbjct: 1   MMASLKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLM 60

Query: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLK------------------ 120
           MHTKK+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSDAL+K                  
Sbjct: 61  MHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLL 120

Query: 121 --------------------------------LPTHMRGGNGKVAYIDTEGTFRPDRIVP 180
                                           LPT+M+GGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVP 180

Query: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240
           IAERFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFT 240

Query: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 265
           GRGELA+RQQKLAQMLSRL KIAEEFNVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAH
Sbjct: 241 GRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAH 300

[Close]

BLAST of Moc05g05300 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 201.8 bits (512), Expect = 6.7e-52
Identity = 123/296 (41.55%), Postives = 164/296 (55.41%), Query Frame = 0


Query: 9   EQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 68
           EQ +    V+++D E+       +++L + GI + DVKKL+DAG+ T  G+    +K L 
Sbjct: 5   EQRRNQNAVQQQDDEETQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPRKDLL 64

Query: 69  GIKGLSEAKVDKICEAAEKLVNFGYITGS-------------------DALL-------- 128
            IKG+S+AKVDKI EAA KLV  G+ + S                   D +L        
Sbjct: 65  QIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGIETGS 124

Query: 129 -----------------------KLPTHMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMD 188
                                  +LP    GG GK  YID EGTFRP R++ IA+RFG++
Sbjct: 125 ITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLN 184

Query: 189 PGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAER 248
              VL+N+ YARAY  +HQ  LLL  A+ M E  F LLIVDS  AL+R DF+GRGEL+ R
Sbjct: 185 GADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELSAR 244

Query: 249 QQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPK-KPAGGHVLAHAAT 254
           Q  LA+ L  L K+A+EF VAV +TNQVVA   G    + P+ KP GG+++AHA T
Sbjct: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATT 300

[Close]

BLAST of Moc05g05300 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-13
Identity = 52/156 (33.33%), Postives = 80/156 (51.28%), Query Frame = 0


Query: 101 LKLPTHMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPG 160
           +++P    G  GK  YIDTEG+F  +R + IAE                    +  M P 
Sbjct: 147 VQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPE 206

Query: 161 AVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVDSIIALFRVDFTGRGELAERQ 220
            +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVDSI   FR D+    +LA+R 
Sbjct: 207 DILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDY---DDLAQRT 266

Query: 221 QKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVF 236
           + L++M  +  K+A++F++AV + NQV      G F
Sbjct: 267 RVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSF 299

[Close]

BLAST of Moc05g05300 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 74.3 bits (181), Expect = 1.6e-13
Identity = 52/156 (33.33%), Postives = 80/156 (51.28%), Query Frame = 0


Query: 101 LKLPTHMRGGNGKVAYIDTEGTFRPDRIVPIAE--------------------RFGMDPG 160
           +++P    G  GK  YIDTEG+F  +R + IAE                    +  M P 
Sbjct: 171 VQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPE 230

Query: 161 AVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVDSIIALFRVDFTGRGELAERQ 220
            +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVDSI   FR D+    +LA+R 
Sbjct: 231 DILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDY---DDLAQRT 290

Query: 221 QKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVF 236
           + L++M  +  K+A++F++AV + NQV      G F
Sbjct: 291 RVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSF 323

[Close]

BLAST of Moc05g05300 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 50.8 bits (120), Expect = 1.9e-06
Identity = 32/138 (23.19%), Postives = 67/138 (48.55%), Query Frame = 0


Query: 102 KLPTHMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV--------LDNIIYARAYT 161
           +LP    G NG   Y+ +E  F   R+  ++  F     ++         D++     ++
Sbjct: 64  QLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHS 123

Query: 162 YEHQHNLLLGLAAKMSEE----PFKLLIVDSIIALFRVDFTGR-GELAERQQKLAQMLSR 221
            +H  +++  +   +       P KL+++DS+ ALFR +F     +L +R     ++  +
Sbjct: 124 VDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGK 183

Query: 222 LTKIAEEFNVAVYMTNQV 227
           L ++A +F++A+ +TNQV
Sbjct: 184 LKQLASKFDLAIVITNQV 201

The following BLAST results are available for this feature:

BLAST of Moc05g05300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138203.1	2.3e-131	74.58	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica chara...	[more]
XP_004134116.1	2.3e-131	76.23	meiotic recombination protein DMC1 homolog isoform X2 [Cucumis sativus] >XP_0388...	[more]
XP_008438613.1	5.2e-131	75.94	PREDICTED: meiotic recombination protein DMC1 homolog [Cucumis melo]	[more]
XP_022947681.1	3.4e-130	75.07	meiotic recombination protein DMC1 homolog [Cucurbita moschata] >XP_022974437.1 ...	[more]
XP_031739053.1	4.4e-130	82.89	meiotic recombination protein DMC1 homolog isoform X1 [Cucumis sativus]	[more]

BLAST of Moc05g05300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96449	2.2e-124	70.43	Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q39009	1.1e-118	67.25	Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DM...	[more]
P37384	1.7e-113	66.57	Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM1...	[more]
Q7EAG4	1.1e-110	68.98	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39...	[more]
Q7GBF7	1.1e-110	68.98	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Moc05g05300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCE5	1.1e-131	74.58	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica cha...	[more]
A0A1S3AXH2	2.5e-131	75.94	meiotic recombination protein DMC1 homolog OS=Cucumis melo OX=3656 GN=LOC1034836...	[more]
A0A6J1IA86	1.6e-130	75.07	meiotic recombination protein DMC1 homolog isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1G745	1.6e-130	75.07	meiotic recombination protein DMC1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A5D3D096	4.7e-130	82.57	Meiotic recombination protein DMC1-like protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Moc05g05300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22880.1	7.5e-120	67.25	DNA repair (Rad51) family protein	[more]
AT5G20850.1	6.7e-52	41.55	RAS associated with diabetes protein 51	[more]
AT2G45280.1	1.6e-13	33.33	RAS associated with diabetes protein 51C	[more]
AT2G45280.2	1.6e-13	33.33	RAS associated with diabetes protein 51C	[more]
AT5G57450.1	1.9e-06	23.19	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.150.20		coord: 9..92 e-value: 2.0E-30 score: 106.6
None	No IPR available	PANTHER	PTHR22942:SF64	MEIOTIC RECOMBINATION PROTEIN DMC1-LIKE PROTEIN	coord: 102..254 coord: 15..102
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 102..254 coord: 15..102
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 102..254 e-value: 4.4E-65 score: 219.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 97..264 e-value: 1.0E-48 score: 168.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 103..254
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 90..226 score: 24.180822
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 103..254 e-value: 2.49687E-78 score: 234.785
IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	SUPERFAMILY	47794	Rad51 N-terminal domain-like	coord: 24..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g05300.1	Moc05g05300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0007131	reciprocal meiotic recombination
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000150	DNA strand exchange activity
molecular_function	GO:0000166	nucleotide binding