Moc05g05250 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g05250
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Descriptionvegetative cell wall protein gp1
Locationchr5: 3641236 .. 3641823 (+)
RNA-Seq ExpressionMoc05g05250
SyntenyMoc05g05250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTGCAATTCAGCCTTCTTTTCCTTCACTCTCCTCAGGAAGACGCTTCCCATTTATTGCTATTCTCCGTCTTCCAATCTCGTGATACCTTCGCTTTTCCTTTCCCATGGCGGACTCAAGATTCAAAACTCTGCGCCTCTGCTTCCCGGAGACTCGCCGGAGTTTCCGACCAAGACCCCTCCGGAGTTCCCCCAAAAAAGCCCCATTCACGAGCCGTCTATTCCCCACGAAGTTCCGGAAATTTTCACTGATCCGGAGGTTGACCCGAGCTCTCCACCGGAAGTGAACCCGGCGGATCTTCCGCCGTTAGGTCCAGACCAGAATCCCGGACCGGAATTTCCAATTCCGCCGGCTCCGTCGCCTCCGGGGCCCGAATTTCCCAAGCCTCCATTGCCGTCGCCTCCGGGAATCGACGTCCCGATACCGCCCCATATGCCACCAGATATAGAACCGCCGAAGCCCGGGATACCGGTGCCGGGGCCGGACCATCTGCCGCCGCCGAGGCCCGCCGGCCCGGAGATCGTGACTTCGCCATCTCCGCCTGAATTTGTTCCTCCGATGGCCTTACTTTGTCATGGGTGGTAA

mRNA sequence

ATGTCGTGCAATTCAGCCTTCTTTTCCTTCACTCTCCTCAGGAAGACGCTTCCCATTTATTGCTATTCTCCGTCTTCCAATCTCGTGATACCTTCGCTTTTCCTTTCCCATGGCGGACTCAAGATTCAAAACTCTGCGCCTCTGCTTCCCGGAGACTCGCCGGAGTTTCCGACCAAGACCCCTCCGGAGTTCCCCCAAAAAAGCCCCATTCACGAGCCGTCTATTCCCCACGAAGTTCCGGAAATTTTCACTGATCCGGAGGTTGACCCGAGCTCTCCACCGGAAGTGAACCCGGCGGATCTTCCGCCGTTAGGTCCAGACCAGAATCCCGGACCGGAATTTCCAATTCCGCCGGCTCCGTCGCCTCCGGGGCCCGAATTTCCCAAGCCTCCATTGCCGTCGCCTCCGGGAATCGACGTCCCGATACCGCCCCATATGCCACCAGATATAGAACCGCCGAAGCCCGGGATACCGGTGCCGGGGCCGGACCATCTGCCGCCGCCGAGGCCCGCCGGCCCGGAGATCGTGACTTCGCCATCTCCGCCTGAATTTGTTCCTCCGATGGCCTTACTTTGTCATGGGTGGTAA

Coding sequence (CDS)

ATGTCGTGCAATTCAGCCTTCTTTTCCTTCACTCTCCTCAGGAAGACGCTTCCCATTTATTGCTATTCTCCGTCTTCCAATCTCGTGATACCTTCGCTTTTCCTTTCCCATGGCGGACTCAAGATTCAAAACTCTGCGCCTCTGCTTCCCGGAGACTCGCCGGAGTTTCCGACCAAGACCCCTCCGGAGTTCCCCCAAAAAAGCCCCATTCACGAGCCGTCTATTCCCCACGAAGTTCCGGAAATTTTCACTGATCCGGAGGTTGACCCGAGCTCTCCACCGGAAGTGAACCCGGCGGATCTTCCGCCGTTAGGTCCAGACCAGAATCCCGGACCGGAATTTCCAATTCCGCCGGCTCCGTCGCCTCCGGGGCCCGAATTTCCCAAGCCTCCATTGCCGTCGCCTCCGGGAATCGACGTCCCGATACCGCCCCATATGCCACCAGATATAGAACCGCCGAAGCCCGGGATACCGGTGCCGGGGCCGGACCATCTGCCGCCGCCGAGGCCCGCCGGCCCGGAGATCGTGACTTCGCCATCTCCGCCTGAATTTGTTCCTCCGATGGCCTTACTTTGTCATGGGTGGTAA

Protein sequence

MSCNSAFFSFTLLRKTLPIYCYSPSSNLVIPSLFLSHGGLKIQNSAPLLPGDSPEFPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLGPDQNPGPEFPIPPAPSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHLPPPRPAGPEIVTSPSPPEFVPPMALLCHGW
Homology
BLAST of Moc05g05250 vs. NCBI nr
Match: XP_022975412.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita maxima] >XP_022975628.1 leucine-rich repeat extensin-like protein 3 isoform X1 [Cucurbita maxima] >XP_022975629.1 leucine-rich repeat extensin-like protein 3 isoform X2 [Cucurbita maxima] >XP_022975630.1 leucine-rich repeat extensin-like protein 3 isoform X3 [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 9.7e-42
Identity = 127/203 (62.56%), Postives = 144/203 (70.94%), Query Frame = 0

Query: 1   MSCNSAFFSFTLLRKTLPI-YCYSPSSNLVIPSLFLSHGG-LKIQNSAP----LLPGDSP 60
           MSC S  FSFTL+RKTLPI Y  S SSNLVIPS FLSHG  L  +NSAP    LL GDS 
Sbjct: 1   MSCTSP-FSFTLIRKTLPIYYSSSSSSNLVIPS-FLSHGEFLPFKNSAPLSRFLLVGDS- 60

Query: 61  EFPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLGPDQNPGPEF 120
                  PEFPQKSPI EPS+P E+P+I T PE+DP +PPE     LPP+     PGP+F
Sbjct: 61  -------PEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPE-----LPPI----TPGPDF 120

Query: 121 PIPPAPSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHL-------PP 180
           P  P+P PPGP+FP PP+PSPPGIDVPIPPH PPDIEPP+PG PVP PD L       PP
Sbjct: 121 PGLPSPLPPGPDFPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPP 180

Query: 181 PRPAGPEIVTSPSPPEFVPPMAL 191
           PRP GPEI TSPS P+ +PP+A+
Sbjct: 181 PRPPGPEIFTSPSSPD-IPPVAM 183

BLAST of Moc05g05250 vs. NCBI nr
Match: KAG6597407.1 (hypothetical protein SDJN03_10587, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-41
Identity = 127/203 (62.56%), Postives = 144/203 (70.94%), Query Frame = 0

Query: 1   MSCNSAFFSFTLLRKTLPI-YCYSPSSNLVIPSLFLSHGG-LKIQNSAP----LLPGDSP 60
           MSC S  FSFTL+RKTLPI Y  S SSNLVIPS FLSHG  L  +NSAP    LL GDS 
Sbjct: 1   MSCTSP-FSFTLIRKTLPIYYSSSSSSNLVIPS-FLSHGEFLPFKNSAPLSRFLLVGDS- 60

Query: 61  EFPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLGPDQNPGPEF 120
                  PEFPQKSPI EPS+P E+P+I T PE+DP +PPE     LPPL     PGP+F
Sbjct: 61  -------PEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPE-----LPPL----TPGPDF 120

Query: 121 PIPPAPSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHL-------PP 180
           P  P+P PPGP+ P PP+PSPPGIDVPIPPH PPDIEPP+PG PVP PD L       PP
Sbjct: 121 PGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPP 180

Query: 181 PRPAGPEIVTSPSPPEFVPPMAL 191
           PRP GPEI+TSPS P+ +PP+A+
Sbjct: 181 PRPPGPEILTSPSSPD-IPPVAM 183

BLAST of Moc05g05250 vs. NCBI nr
Match: XP_022949559.1 (vegetative cell wall protein gp1 [Cucurbita moschata])

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-40
Identity = 125/203 (61.58%), Postives = 143/203 (70.44%), Query Frame = 0

Query: 1   MSCNSAFFSFTLLRKTLPI-YCYSPSSNLVIPSLFLSHGG-LKIQNSAP----LLPGDSP 60
           MSC S  FSFTL+RKTLPI Y  S SSNLVIPS F SHG  L  +NSAP    LL GDS 
Sbjct: 1   MSCTSP-FSFTLIRKTLPIYYSSSSSSNLVIPS-FPSHGEFLPFKNSAPLSRFLLVGDS- 60

Query: 61  EFPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLGPDQNPGPEF 120
                  PEFPQKSPI EPS+P E+P+I T PE+DP +PPE     LPPL     PGP+F
Sbjct: 61  -------PEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPE-----LPPL----TPGPDF 120

Query: 121 PIPPAPSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHL-------PP 180
           P  P+P PPGP+ P PP+PSPPGIDVPIPPH PPDIEPP+PG PVP PD L       PP
Sbjct: 121 PGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPP 180

Query: 181 PRPAGPEIVTSPSPPEFVPPMAL 191
           PRP GPEI+TSPS P+ +PP+++
Sbjct: 181 PRPPGPEILTSPSSPD-IPPVSM 183

BLAST of Moc05g05250 vs. NCBI nr
Match: XP_023539404.1 (pistil-specific extensin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-38
Identity = 122/202 (60.40%), Postives = 139/202 (68.81%), Query Frame = 0

Query: 1   MSCNSAFFSFTLLRKTLPIYCYSPSSNLVIPSLFLSHGG-LKIQNSAP----LLPGDSPE 60
           MSC S  FSFTL+RKTLPIY YS SS    PS FLSHG  L  +NSAP    LL GDS  
Sbjct: 1   MSCTSP-FSFTLMRKTLPIY-YSSSS----PSSFLSHGEFLPFKNSAPLSRFLLVGDS-- 60

Query: 61  FPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLGPDQNPGPEFP 120
                 PEFPQKSPI EPS+P EVP+I   P +DP +PPE     LPP+     PGP+FP
Sbjct: 61  ------PEFPQKSPIPEPSVPLEVPQISISPAIDPITPPE-----LPPI----TPGPDFP 120

Query: 121 IPPAPSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHL-------PPP 180
             P+P PPGP+ P PP+PSPPGIDVPIPPH PPDIEPP+PG PVP PD L       PPP
Sbjct: 121 GLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPP 178

Query: 181 RPAGPEIVTSPSPPEFVPPMAL 191
           RP GPEI+TSPS P+ +PP+A+
Sbjct: 181 RPPGPEILTSPSSPD-IPPVAM 178

BLAST of Moc05g05250 vs. NCBI nr
Match: TYK17238.1 (hypothetical protein E5676_scaffold434G00890 [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 4.5e-31
Identity = 106/205 (51.71%), Postives = 121/205 (59.02%), Query Frame = 0

Query: 1   MSCNSAFFSFTLLRKTLPIYCYSPSSNLVIP-----SLFLSHGGLKIQNSAPLLPGDSPE 60
           MSC S  FSFTL+ KTLP Y Y  SSN V P     S FLS        S  +L GDS  
Sbjct: 5   MSCTS-LFSFTLITKTLPSY-YPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDS-- 64

Query: 61  FPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLGPDQNPGPEFP 120
                 PEFP+  P+  PS+P E+P+    PE+DPS+P E+         P   P P+F 
Sbjct: 65  ------PEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSEL---------PSITPEPDF- 124

Query: 121 IPPAPSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHLP--------- 180
             P P PPGPEFPKPP PSPPGIDVP+PP  PPDIEPP PG PVPGP+ LP         
Sbjct: 125 --PDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPP 184

Query: 181 ----PPRPAGPEIVTSPSPPEFVPP 188
               PPRP GPEI+TSPSP +FVPP
Sbjct: 185 RPPGPPRPFGPEILTSPSPTDFVPP 187

BLAST of Moc05g05250 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.9e-04
Identity = 55/149 (36.91%), Postives = 64/149 (42.95%), Query Frame = 0

Query: 46  APLLPGDSPEFPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLG 105
           AP  PG     P   P   P       P+ P   P     P   P SP   +PA   P  
Sbjct: 64  APPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPS 123

Query: 106 PDQNPGPEFPIPPAPSPPGPEFPKPPLPSPPGIDVPIPPH----MPPDIEPPKPGIPVPG 165
           P   P P  P PP+PSPP P  P PP P+PP    P+PP     +PP   PP P  P P 
Sbjct: 124 P-APPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPS 183

Query: 166 PDHLPPPRP--AGPEIVTSPSPPEFVPPM 189
           P   P P P    P +  SP+PP   PP+
Sbjct: 184 PPVPPSPAPPSPAPPVPPSPAPPSPAPPV 211

BLAST of Moc05g05250 vs. ExPASy TrEMBL
Match: A0A6J1IL49 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111475363 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 127/203 (62.56%), Postives = 144/203 (70.94%), Query Frame = 0

Query: 1   MSCNSAFFSFTLLRKTLPI-YCYSPSSNLVIPSLFLSHGG-LKIQNSAP----LLPGDSP 60
           MSC S  FSFTL+RKTLPI Y  S SSNLVIPS FLSHG  L  +NSAP    LL GDS 
Sbjct: 1   MSCTSP-FSFTLIRKTLPIYYSSSSSSNLVIPS-FLSHGEFLPFKNSAPLSRFLLVGDS- 60

Query: 61  EFPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLGPDQNPGPEF 120
                  PEFPQKSPI EPS+P E+P+I T PE+DP +PPE     LPP+     PGP+F
Sbjct: 61  -------PEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPE-----LPPI----TPGPDF 120

Query: 121 PIPPAPSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHL-------PP 180
           P  P+P PPGP+FP PP+PSPPGIDVPIPPH PPDIEPP+PG PVP PD L       PP
Sbjct: 121 PGLPSPLPPGPDFPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPP 180

Query: 181 PRPAGPEIVTSPSPPEFVPPMAL 191
           PRP GPEI TSPS P+ +PP+A+
Sbjct: 181 PRPPGPEIFTSPSSPD-IPPVAM 183

BLAST of Moc05g05250 vs. ExPASy TrEMBL
Match: A0A6J1GD64 (vegetative cell wall protein gp1 OS=Cucurbita moschata OX=3662 GN=LOC111452871 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 125/203 (61.58%), Postives = 143/203 (70.44%), Query Frame = 0

Query: 1   MSCNSAFFSFTLLRKTLPI-YCYSPSSNLVIPSLFLSHGG-LKIQNSAP----LLPGDSP 60
           MSC S  FSFTL+RKTLPI Y  S SSNLVIPS F SHG  L  +NSAP    LL GDS 
Sbjct: 1   MSCTSP-FSFTLIRKTLPIYYSSSSSSNLVIPS-FPSHGEFLPFKNSAPLSRFLLVGDS- 60

Query: 61  EFPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLGPDQNPGPEF 120
                  PEFPQKSPI EPS+P E+P+I T PE+DP +PPE     LPPL     PGP+F
Sbjct: 61  -------PEFPQKSPIPEPSVPLEIPQISTSPEIDPITPPE-----LPPL----TPGPDF 120

Query: 121 PIPPAPSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHL-------PP 180
           P  P+P PPGP+ P PP+PSPPGIDVPIPPH PPDIEPP+PG PVP PD L       PP
Sbjct: 121 PGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPP 180

Query: 181 PRPAGPEIVTSPSPPEFVPPMAL 191
           PRP GPEI+TSPS P+ +PP+++
Sbjct: 181 PRPPGPEILTSPSSPD-IPPVSM 183

BLAST of Moc05g05250 vs. ExPASy TrEMBL
Match: A0A5D3D162 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00890 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.2e-31
Identity = 106/205 (51.71%), Postives = 121/205 (59.02%), Query Frame = 0

Query: 1   MSCNSAFFSFTLLRKTLPIYCYSPSSNLVIP-----SLFLSHGGLKIQNSAPLLPGDSPE 60
           MSC S  FSFTL+ KTLP Y Y  SSN V P     S FLS        S  +L GDS  
Sbjct: 5   MSCTS-LFSFTLITKTLPSY-YPSSSNFVTPLLFSHSQFLSFNEYSTSLSRSMLSGDS-- 64

Query: 61  FPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLGPDQNPGPEFP 120
                 PEFP+  P+  PS+P E+P+    PE+DPS+P E+         P   P P+F 
Sbjct: 65  ------PEFPKSRPVPPPSLPLEIPQFSPPPEIDPSTPSEL---------PSITPEPDF- 124

Query: 121 IPPAPSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHLP--------- 180
             P P PPGPEFPKPP PSPPGIDVP+PP  PPDIEPP PG PVPGP+ LP         
Sbjct: 125 --PDPRPPGPEFPKPPSPSPPGIDVPVPPRRPPDIEPPWPGSPVPGPEILPPSPPEEMPP 184

Query: 181 ----PPRPAGPEIVTSPSPPEFVPP 188
               PPRP GPEI+TSPSP +FVPP
Sbjct: 185 RPPGPPRPFGPEILTSPSPTDFVPP 187

BLAST of Moc05g05250 vs. ExPASy TrEMBL
Match: A0A0A0L4M0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144200 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.6e-28
Identity = 100/200 (50.00%), Postives = 114/200 (57.00%), Query Frame = 0

Query: 5   SAFFSFTLLRKTLPIYCYSPSSNLVIPSLFLSHGGLKIQNSAP------LLPGDSPEFPT 64
           ++ FSFTL+RKTLP Y Y  SSN  I     SH      N  P      LL GDS     
Sbjct: 8   TSLFSFTLIRKTLPSY-YPCSSNFAINPFLFSHSQFLPFNEYPASLSLSLLSGDS----- 67

Query: 65  KTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLGPDQNPGPEFPIPP 124
              PEFP+  P+  PS P E+P+    PE+DPS+P E+         P   P PEFP   
Sbjct: 68  ---PEFPEIRPVPPPSFPLEIPQFSPPPEIDPSTPSEL---------PSITPEPEFP--- 127

Query: 125 APSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHLP------------ 184
            P PPGPEFPKPPLPSPPGIDVP+PP  PP+IEPP PG PVP P+ LP            
Sbjct: 128 -PRPPGPEFPKPPLPSPPGIDVPLPPRKPPEIEPPWPGSPVPEPEILPPSPPEEVPPRPP 185

Query: 185 -PPRPAGPEIVTSPSPPEFV 186
            PPRP GPEI+TS SPP FV
Sbjct: 188 SPPRPFGPEILTSASPPGFV 185

BLAST of Moc05g05250 vs. ExPASy TrEMBL
Match: A0A5E4G125 (PREDICTED: vegetative cell wall gp1 OS=Prunus dulcis OX=3755 GN=ALMOND_2B007967 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 4.1e-14
Identity = 85/195 (43.59%), Postives = 110/195 (56.41%), Query Frame = 0

Query: 1   MSCNSAFFSFTLLRKTLPIYCYSPSSNLVIPSLFLSHGGLKIQNSAPL----LPGDSPEF 60
           MS + + FS TL+R+T+P   ++ S+     + FLS    K +   PL    LP    ++
Sbjct: 1   MSSSISSFSSTLIRRTIPFCSFTNSTTSATSTQFLSP---KRKPICPLLARALPDSPDQY 60

Query: 61  PTKTPPEF--PQKSPIHEPSIPHEVPEIFTDPEVD--PSSPPEVNPADLPPLGPDQNPGP 120
           PT++PPEF  P      +PS P EVP I T P+VD  P  PPEVNP   PPL PD NPG 
Sbjct: 61  PTRSPPEFSPPVPGRYDQPSAPPEVPGISTSPDVDTTPVPPPEVNPYP-PPLDPDPNPGQ 120

Query: 121 EFPIPPAPSPPGPEFPKPPLPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPDHLPPPRPAG 180
           +FP+PP   PP P+ P PP P     D P+P    PD+ PP+P      PD +PPP P G
Sbjct: 121 DFPVPPLKPPPVPDIP-PPFP-----DNPLP---KPDVVPPQP------PDIVPPP-PPG 173

Query: 181 PEIVTSPSPPEFVPP 188
           PEI+  P+PP   PP
Sbjct: 181 PEIIQPPAPPR--PP 173

BLAST of Moc05g05250 vs. TAIR 10
Match: AT5G43770.1 (proline-rich family protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-11
Identity = 67/132 (50.76%), Postives = 79/132 (59.85%), Query Frame = 0

Query: 50  PGDSPEFPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPS-SPPEVN--PADLPPLGP 109
           PG SP    K  P  P + P      P EVPE+   PE+ PS +PPEV   P+D PPLGP
Sbjct: 66  PGGSPS--EKELPSGPSRGP---ELAPLEVPELPNIPEISPSETPPEVTTVPSDPPPLGP 125

Query: 110 DQNPGPEFPIPPAPSPPGPEFPKPPLP-SPPGIDVPI-PPHMPPDIEPPKPGIPVPGPDH 169
            Q PGPEFP+PP+PSPP P+ P PP P +PP +  PI  P  PPDI PP+   P PG D 
Sbjct: 126 PQTPGPEFPVPPSPSPPMPDTPNPPTPKTPPDVVPPIWEPPRPPDIFPPES--PPPGID- 185

Query: 170 LPPPRPAGPEIV 177
             PP P GP I+
Sbjct: 186 --PPPPLGPTIM 187

BLAST of Moc05g05250 vs. TAIR 10
Match: AT3G19430.1 (late embryogenesis abundant protein-related / LEA protein-related )

HSP 1 Score: 42.7 bits (99), Expect = 3.8e-04
Identity = 55/144 (38.19%), Postives = 69/144 (47.92%), Query Frame = 0

Query: 46  APLLPGDSPEFPTKTPPEFPQKSPIHEPSIPHEVPEIFTDPEVDPSSPPEVNPADLPPLG 105
           +P  P  +P  P+ TPP  P   P   PS+P   P +   P   P+  P V P+  PP+ 
Sbjct: 116 SPPPPTPTPSVPSPTPPVSP-PPPTPTPSVPSPTPPVSPPP---PTPTPSV-PSPTPPVP 175

Query: 106 PDQNPGPEFPIPPAPSPPGPEFPKPP--LPSPPGIDVPIPPHMPPDIEPPKPGIPVPGPD 165
            D  P P  P+ P P  P P  P PP   P+PP   VP PP + P   PP P +P P PD
Sbjct: 176 TDPMPSPPPPVSPPPPTPTPSVPSPPDVTPTPPTPSVPSPPDVTP--TPPTPSVPSP-PD 235

Query: 166 HLPPPRPAGPEIVTSPSPPEFVPP 188
             P P P  P + T    P +VPP
Sbjct: 236 VTPTP-PTPPSVPTPSGSPPYVPP 250

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022975412.19.7e-4262.56leucine-rich repeat extensin-like protein 3 [Cucurbita maxima] >XP_022975628.1 l... [more]
KAG6597407.11.7e-4162.56hypothetical protein SDJN03_10587, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022949559.12.4e-4061.58vegetative cell wall protein gp1 [Cucurbita moschata][more]
XP_023539404.11.7e-3860.40pistil-specific extensin-like protein [Cucurbita pepo subsp. pepo][more]
TYK17238.14.5e-3151.71hypothetical protein E5676_scaffold434G00890 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q9FPQ64.9e-0436.91Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=... [more]
Match NameE-valueIdentityDescription
A0A6J1IL494.7e-4262.56leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1GD641.2e-4061.58vegetative cell wall protein gp1 OS=Cucurbita moschata OX=3662 GN=LOC111452871 P... [more]
A0A5D3D1622.2e-3151.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L4M06.6e-2850.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144200 PE=4 SV=1[more]
A0A5E4G1254.1e-1443.59PREDICTED: vegetative cell wall gp1 OS=Prunus dulcis OX=3755 GN=ALMOND_2B007967 ... [more]
Match NameE-valueIdentityDescription
AT5G43770.11.5e-1150.76proline-rich family protein [more]
AT3G19430.13.8e-0438.19late embryogenesis abundant protein-related / LEA protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g05250.1Moc05g05250.1mRNA