Moc05g04880 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g04880
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DNA-directed RNA polymerase II subunit 1-like
Location	chr5: 3356649 .. 3358104 (+)
RNA-Seq Expression	Moc05g04880
Synteny	Moc05g04880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAATCTTCCTCGATTCGGCCGTACATGGCAACGTCAGGCTGTGGTTGCGCCGCCAGCTCCCGCCGCCGTGCCGCCATCAGTTCCGACCACCCAAACTCTGCAACCTTTCGAACCCAACCTGCCGCCATCGGCTTCTCCTGCGTCTTCCCCTTTGAAAGCATCTCCCGGCCGGCGAGGTCCTTCCGCGTCGCCGAAATACAGAGCTGCCGCCAAACGTGTGGGTAGTTCGCCGGCGAAGTCCGCACGATCGCCGCCGGCGTCTCCTGCAACCAAATATTCCGACCGGGGACATGCCCAAACAACCCCACCTCTCTCGCCGGCCAAGTCCCGGCGAACAGCAACGCCGCCACTTTCTCCTCTTGCTCTTCCACGTACCGCAAATGGCGCGCTCCATTCTAGGTATTAAACTACCATCACTAACTTGAAAAAATGTTAAAACATATGAGGCTAAATTTAGATTGAAAAAACAACACCAACTTGAGAGAAAGAACATATTTGAAAGAAGTTTAAAGGACAAATTAGTCAACATTGACACCTCTTCATATATTTATTTAAAAAATAAAAGAAATATTTCTTTTACATATTAAAAATTTGATGATAATTCGTAAAAAATGAATACTAATGAAATATTATTCTATATATTAAAATTTTAAAGTATATATACTAGATAGACGTAATCTTATTAAAAATTTAGATAATTATAAGAGTACATATTTAAATACACACATATTGATACACCAAATGTGTAATTGAATCTACTATTTCTCATTCACGCTCCGTTTTAACACTCTTCTCAGCCTTAAAATTTATTAGATATCTCATAAGTTGTTAAATATTTACCTTATCCTACTGGGATAAGCTTTTAACCTAAAGTGAGACAATCCATTCTAAATATTAATTACTGTAAAAAAAAGGAAAAAAACAACAACAACAATTCTAAAAATTAATTAGGAAGAAAATTGCTCGAAATCTATGGTAAGTTTAATTTTTTATTTCTTAACACCAGCGTGTTGCCGGAGGTGGAGAAGAAAAGTGTTCTGTACAACAAGACCGTCGAGAAGCCGGCGAAGTCTGGCCGGCCGTCGGAGCACGGCTCCGGTAAGCCGCCGCAGGCGGAGGTTATAAACCTCACCGGACACAACGTAGGCGCCGTCATGGAAATAAATCAGTCCTCCGCCAAACATTCCGCCGGTGAAATCATAAAAAAGAAAGAATCTGAAACGGAATTAGGTGGGGCCCACCACGGAAATGATGAGAGGAAGACAGGGGCAAAAAAGGAATTGCCGGGGACTGCGTTCATGAACAGCAACTTTCAGAGTGTGAACAATTCCGTGCTGTACGACTCGTCGTGCAGCCACCGTGATCCCGGCCTGCATCTCGCCTTCTCCGACACGGCGGACGGCGGCGGCGGAGCCATTGTTGACGGTCATAACAAGAATTACAAGCCCTAG

mRNA sequence

ATGGCAAATCTTCCTCGATTCGGCCGTACATGGCAACGTCAGGCTGTGGTTGCGCCGCCAGCTCCCGCCGCCGTGCCGCCATCAGTTCCGACCACCCAAACTCTGCAACCTTTCGAACCCAACCTGCCGCCATCGGCTTCTCCTGCGTCTTCCCCTTTGAAAGCATCTCCCGGCCGGCGAGGTCCTTCCGCGTCGCCGAAATACAGAGCTGCCGCCAAACGTGTGGGTAGTTCGCCGGCGAAGTCCGCACGATCGCCGCCGGCGTCTCCTGCAACCAAATATTCCGACCGGGGACATGCCCAAACAACCCCACCTCTCTCGCCGGCCAAGTCCCGGCGAACAGCAACGCCGCCACTTTCTCCTCTTGCTCTTCCACGTACCGCAAATGGCGCGCTCCATTCTAGCGTGTTGCCGGAGGTGGAGAAGAAAAGTGTTCTGTACAACAAGACCGTCGAGAAGCCGGCGAAGTCTGGCCGGCCGTCGGAGCACGGCTCCGGTAAGCCGCCGCAGGCGGAGGTTATAAACCTCACCGGACACAACGTAGGCGCCGTCATGGAAATAAATCAGTCCTCCGCCAAACATTCCGCCGGTGAAATCATAAAAAAGAAAGAATCTGAAACGGAATTAGGTGGGGCCCACCACGGAAATGATGAGAGGAAGACAGGGGCAAAAAAGGAATTGCCGGGGACTGCGTTCATGAACAGCAACTTTCAGAGTGTGAACAATTCCGTGCTGTACGACTCGTCGTGCAGCCACCGTGATCCCGGCCTGCATCTCGCCTTCTCCGACACGGCGGACGGCGGCGGCGGAGCCATTGTTGACGGTCATAACAAGAATTACAAGCCCTAG

Coding sequence (CDS)

ATGGCAAATCTTCCTCGATTCGGCCGTACATGGCAACGTCAGGCTGTGGTTGCGCCGCCAGCTCCCGCCGCCGTGCCGCCATCAGTTCCGACCACCCAAACTCTGCAACCTTTCGAACCCAACCTGCCGCCATCGGCTTCTCCTGCGTCTTCCCCTTTGAAAGCATCTCCCGGCCGGCGAGGTCCTTCCGCGTCGCCGAAATACAGAGCTGCCGCCAAACGTGTGGGTAGTTCGCCGGCGAAGTCCGCACGATCGCCGCCGGCGTCTCCTGCAACCAAATATTCCGACCGGGGACATGCCCAAACAACCCCACCTCTCTCGCCGGCCAAGTCCCGGCGAACAGCAACGCCGCCACTTTCTCCTCTTGCTCTTCCACGTACCGCAAATGGCGCGCTCCATTCTAGCGTGTTGCCGGAGGTGGAGAAGAAAAGTGTTCTGTACAACAAGACCGTCGAGAAGCCGGCGAAGTCTGGCCGGCCGTCGGAGCACGGCTCCGGTAAGCCGCCGCAGGCGGAGGTTATAAACCTCACCGGACACAACGTAGGCGCCGTCATGGAAATAAATCAGTCCTCCGCCAAACATTCCGCCGGTGAAATCATAAAAAAGAAAGAATCTGAAACGGAATTAGGTGGGGCCCACCACGGAAATGATGAGAGGAAGACAGGGGCAAAAAAGGAATTGCCGGGGACTGCGTTCATGAACAGCAACTTTCAGAGTGTGAACAATTCCGTGCTGTACGACTCGTCGTGCAGCCACCGTGATCCCGGCCTGCATCTCGCCTTCTCCGACACGGCGGACGGCGGCGGCGGAGCCATTGTTGACGGTCATAACAAGAATTACAAGCCCTAG

Protein sequence

MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNLPPSASPASSPLKASPGRRGPSASPKYRAAAKRVGSSPAKSARSPPASPATKYSDRGHAQTTPPLSPAKSRRTATPPLSPLALPRTANGALHSSVLPEVEKKSVLYNKTVEKPAKSGRPSEHGSGKPPQAEVINLTGHNVGAVMEINQSSAKHSAGEIIKKKESETELGGAHHGNDERKTGAKKELPGTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYKP

Homology

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BLAST of Moc05g04880 vs. NCBI nr
Match: XP_022147458.1 (vegetative cell wall protein gp1-like [Momordica charantia])

HSP 1 Score: 539.7 bits (1389), Expect = 1.6e-149
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNLPPSASPASSPLKASPGRR 60
           MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNLPPSASPASSPLKASPGRR
Sbjct: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNLPPSASPASSPLKASPGRR 60

Query: 61  GPSASPKYRAAAKRVGSSPAKSARSPPASPATKYSDRGHAQTTPPLSPAKSRRTATPPLS 120
           GPSASPKYRAAAKRVGSSPAKSARSPPASPATKYSDRGHAQTTPPLSPAKSRRTATPPLS
Sbjct: 61  GPSASPKYRAAAKRVGSSPAKSARSPPASPATKYSDRGHAQTTPPLSPAKSRRTATPPLS 120

Query: 121 PLALPRTANGALHSSVLPEVEKKSVLYNKTVEKPAKSGRPSEHGSGKPPQAEVINLTGHN 180
           PLALPRTANGALHSSVLPEVEKKSVLYNKTVEKPAKSGRPSEHGSGKPPQAEVINLTGHN
Sbjct: 121 PLALPRTANGALHSSVLPEVEKKSVLYNKTVEKPAKSGRPSEHGSGKPPQAEVINLTGHN 180

Query: 181 VGAVMEINQSSAKHSAGEIIKKKESETELGGAHHGNDERKTGAKKELPGTAFMNSNFQSV 240
           VGAVMEINQSSAKHSAGEIIKKKESETELGGAHHGNDERKTGAKKELPGTAFMNSNFQSV
Sbjct: 181 VGAVMEINQSSAKHSAGEIIKKKESETELGGAHHGNDERKTGAKKELPGTAFMNSNFQSV 240

Query: 241 NNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYKP 283
           NNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYKP
Sbjct: 241 NNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYKP 282

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BLAST of Moc05g04880 vs. NCBI nr
Match: XP_038879417.1 (proline-rich receptor-like protein kinase PERK8 [Benincasa hispida])

HSP 1 Score: 255.4 bits (651), Expect = 5.8e-64
Identity = 170/308 (55.19%), Postives = 200/308 (64.94%), Query Frame = 0


Query: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPS----------VPTTQTLQPFEPNLPPSASP-- 60
           MANLPR GRT QR + VAPP  AAV P+           PT+   QP EP  P  ASP  
Sbjct: 1   MANLPRIGRTRQRPSAVAPPLLAAVQPTAEPKPEISPFAPTSIQTQPIEPTTPAPASPLR 60

Query: 61  ASSPLKASPGRR--GPSASPKYRAAAKRVGSSP-AKSARSPPASPATKYSDRGHAQTTPP 120
            S  L  SP ++   P ASPKY  +  RV S P AK+ RSPP SP  KY +  + +TTPP
Sbjct: 61  QSPRLITSPPKKATSPFASPKYGDSLTRVDSPPAAKATRSPPDSPTNKYLETRNGETTPP 120

Query: 121 LSPAKSRRTATPPLSPLALPRTANGALHSSVL-----PEVEKKSVLYNKTVEKPAKSGRP 180
           LSPAKSRRT TPPLSPL LPRT   +   +       P VE K ++YNK VEKP K+ RP
Sbjct: 121 LSPAKSRRTKTPPLSPLTLPRTPVISWDETTALPRTQPVVETKGIVYNKAVEKPTKTDRP 180

Query: 181 SEHGSGKPPQ-----AEVINLTGHNVGAVMEINQSSAKHS-AGEIIKKKESETELGGAHH 240
           SE+GSGKP Q     AEVINL GHNVGAVMEIN+SS  +   GE +K K  ET+ GG HH
Sbjct: 181 SEYGSGKPHQKQQATAEVINLNGHNVGAVMEINKSSDGYRLGGETVKNK--ETKGGGVHH 240

Query: 241 GNDERKTGAKKELPGTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVD 283
           G+ E+  GAK   P TAFMN+NFQS+NNS+LYDSSC+H DPGLHL+  ++ D G GA V 
Sbjct: 241 GHKEKNKGAKIVPPVTAFMNTNFQSINNSILYDSSCNHHDPGLHLSLPESVD-GDGATVY 300

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BLAST of Moc05g04880 vs. NCBI nr
Match: XP_008437851.1 (PREDICTED: zyxin-like [Cucumis melo] >KAA0048863.1 zyxin-like [Cucumis melo var. makuwa] >TYK20815.1 zyxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 1.5e-59
Identity = 169/302 (55.96%), Postives = 200/302 (66.23%), Query Frame = 0


Query: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNL--PPSASP---ASSPLKA 60
           MANLPRFGR  QR   V PP PAA  P+V     + PF   +  P  ASP   +  PL +
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  SPGR-RGPSASPKYRAAAKRVGSSP-AKSARSPPASPATKYSDRGHAQTTPPLSPAKSRR 120
            P +   P ASPKY  +  R+  SP AK+  SPP S   KY +R + +TTPPLSPAKSRR
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120

Query: 121 TATPPLSPLALPR----TANG-ALHSSVLPEVEKKSVLYNKTVEKPAKSGRPS-EHGSGK 180
             TPPLSPLALPR    T NG      V PEVE K ++YNKTVEKP+KS R S E+GS K
Sbjct: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180

Query: 181 PPQ----AEVINLTGHNVGAVMEINQSSAKHS-AGEIIKKKESETELGGAH-HGNDERKT 240
             Q     EVI L GHNVGAVMEIN+SS  +   GE +KK E+E ++G  H +G++++KT
Sbjct: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETE-DVGDVHGYGHEDKKT 240

Query: 241 GA-KKELPGTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNY 283
              KKE P TAFMNSNFQSVNNS+L+DSSC+HRDPGLHLAF D  D G GAIVDG  K+Y
Sbjct: 241 ETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVD-GDGAIVDG-QKSY 299

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BLAST of Moc05g04880 vs. NCBI nr
Match: XP_004133797.1 (uncharacterized protein LOC101205942 [Cucumis sativus] >KGN56395.1 hypothetical protein Csa_009520 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 2.2e-58
Identity = 162/301 (53.82%), Postives = 201/301 (66.78%), Query Frame = 0


Query: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSV-PTTQTLQPFEPNLPPSASPASSPLKASPGR 60
           MANLPR GRT QR + V PP PAA  P+V P  +T+        P A+  ++P  ASP R
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEPKYETM--------PYATSITTPAPASPRR 60

Query: 61  RGPS--ASPKYRAA---AKRVGSSP-AKSARSPPASPATKYSDRGHAQTTPPLSPAKSRR 120
             P   +SP  +A    A RV SSP AK+ RSPP S   KY +R + +TTPPL+PAKSR 
Sbjct: 61  ESPRPLSSPSKKATSPFASRVDSSPAAKATRSPPDSIGDKYLERRNGETTPPLTPAKSRP 120

Query: 121 TATPPLSPLALPR----TANG-ALHSSVLPEVEKKSVLYNKTV-EKPAKSGRPSEHGSGK 180
             T PLSPLALPR    T NG      V PEVE K ++YNK   EKP+KS R SEHGSGK
Sbjct: 121 AKTSPLSPLALPRSQVITGNGTTAQPRVQPEVETKGIVYNKAADEKPSKSNRQSEHGSGK 180

Query: 181 PPQAE-----VINLTGHNVGAVMEINQSSAKHS-AGEIIKKKESETELGGAHHGNDERKT 240
               +     V+ L GHNVGAVME+N+SSA +   GE +KKKE+E +     +G++++KT
Sbjct: 181 SVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKKT 240

Query: 241 GAKKELPGTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYK 283
           G KK+ P +AFMNSNFQSVNNS+L+DSSC HRDPGLHL+F + AD GGGA+VDG +K+YK
Sbjct: 241 GRKKKPPISAFMNSNFQSVNNSLLFDSSCQHRDPGLHLSFPNAAD-GGGAVVDG-DKSYK 291

[Close]

BLAST of Moc05g04880 vs. NCBI nr
Match: KAG6597060.1 (hypothetical protein SDJN03_10240, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224.6 bits (571), Expect = 1.1e-54
Identity = 158/294 (53.74%), Postives = 188/294 (63.95%), Query Frame = 0


Query: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNLPPSASPASSP-LKASPGR 60
           M+N PRFG + QR +++APP    +P S+P    L P EP  P   S  S P    SP  
Sbjct: 1   MSNFPRFGLSRQRPSLMAPP---VLPTSLPAA-PLDPIEPPKPVLLSRKSPPRWLTSPEE 60

Query: 61  R--GPSASPKYRAAAKRVGS-SPAKSARSPPASPATKYSDRGHAQTTPPLSPAKSRRTAT 120
           +   P ASP+Y ++  RV S  PAK   SPP SPA KY DR  AQT+P  SP++S RT+ 
Sbjct: 61  KPTSPIASPEYGSSVTRVPSPPPAKDQLSPPVSPAKKYPDRWIAQTSPLQSPSRSLRTSP 120

Query: 121 PPLSPLALPRTANGALHSS-----VLPEVEKKSVLYNKTVEKPAKSGRPSEHGSGKPPQ- 180
           PP  P ALP T   A++ +     + PEVEKKS +YNKTVEKPAKS   SE+GSGKP + 
Sbjct: 121 PP-PPFALPPTQFTAVNGTTTQPKIQPEVEKKSFVYNKTVEKPAKSDWTSEYGSGKPHEK 180

Query: 181 ---AEVINLTGHNVGAVMEINQSSAKHSAGEIIKKKESETELGGAHHGNDERKTGAKKEL 240
               E INL GHNVGAVMEI++S+  H  G        ET  GG   GN+E+K   KKE+
Sbjct: 181 QKVTEAINLAGHNVGAVMEIDKSTVGHRLG-------GETVRGGVRDGNEEKKKKEKKEV 240

Query: 241 PGTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYK 282
           P TAFMNSNFQSVNNSVLY SSC+HRDPGLHL F+D AD G GA VDG  KNYK
Sbjct: 241 PMTAFMNSNFQSVNNSVLYGSSCNHRDPGLHLKFADAAD-GDGATVDG-RKNYK 280

[Close]

BLAST of Moc05g04880 vs. ExPASy TrEMBL
Match: A0A6J1D1D2 (vegetative cell wall protein gp1-like OS=Momordica charantia OX=3673 GN=LOC111016378 PE=4 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 7.5e-150
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNLPPSASPASSPLKASPGRR 60
           MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNLPPSASPASSPLKASPGRR
Sbjct: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNLPPSASPASSPLKASPGRR 60

Query: 61  GPSASPKYRAAAKRVGSSPAKSARSPPASPATKYSDRGHAQTTPPLSPAKSRRTATPPLS 120
           GPSASPKYRAAAKRVGSSPAKSARSPPASPATKYSDRGHAQTTPPLSPAKSRRTATPPLS
Sbjct: 61  GPSASPKYRAAAKRVGSSPAKSARSPPASPATKYSDRGHAQTTPPLSPAKSRRTATPPLS 120

Query: 121 PLALPRTANGALHSSVLPEVEKKSVLYNKTVEKPAKSGRPSEHGSGKPPQAEVINLTGHN 180
           PLALPRTANGALHSSVLPEVEKKSVLYNKTVEKPAKSGRPSEHGSGKPPQAEVINLTGHN
Sbjct: 121 PLALPRTANGALHSSVLPEVEKKSVLYNKTVEKPAKSGRPSEHGSGKPPQAEVINLTGHN 180

Query: 181 VGAVMEINQSSAKHSAGEIIKKKESETELGGAHHGNDERKTGAKKELPGTAFMNSNFQSV 240
           VGAVMEINQSSAKHSAGEIIKKKESETELGGAHHGNDERKTGAKKELPGTAFMNSNFQSV
Sbjct: 181 VGAVMEINQSSAKHSAGEIIKKKESETELGGAHHGNDERKTGAKKELPGTAFMNSNFQSV 240

Query: 241 NNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYKP 283
           NNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYKP
Sbjct: 241 NNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYKP 282

[Close]

BLAST of Moc05g04880 vs. ExPASy TrEMBL
Match: A0A5A7TZ24 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00760 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 7.2e-60
Identity = 169/302 (55.96%), Postives = 200/302 (66.23%), Query Frame = 0


Query: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNL--PPSASP---ASSPLKA 60
           MANLPRFGR  QR   V PP PAA  P+V     + PF   +  P  ASP   +  PL +
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  SPGR-RGPSASPKYRAAAKRVGSSP-AKSARSPPASPATKYSDRGHAQTTPPLSPAKSRR 120
            P +   P ASPKY  +  R+  SP AK+  SPP S   KY +R + +TTPPLSPAKSRR
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120

Query: 121 TATPPLSPLALPR----TANG-ALHSSVLPEVEKKSVLYNKTVEKPAKSGRPS-EHGSGK 180
             TPPLSPLALPR    T NG      V PEVE K ++YNKTVEKP+KS R S E+GS K
Sbjct: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180

Query: 181 PPQ----AEVINLTGHNVGAVMEINQSSAKHS-AGEIIKKKESETELGGAH-HGNDERKT 240
             Q     EVI L GHNVGAVMEIN+SS  +   GE +KK E+E ++G  H +G++++KT
Sbjct: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETE-DVGDVHGYGHEDKKT 240

Query: 241 GA-KKELPGTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNY 283
              KKE P TAFMNSNFQSVNNS+L+DSSC+HRDPGLHLAF D  D G GAIVDG  K+Y
Sbjct: 241 ETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVD-GDGAIVDG-QKSY 299

[Close]

BLAST of Moc05g04880 vs. ExPASy TrEMBL
Match: A0A1S3AV38 (zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 7.2e-60
Identity = 169/302 (55.96%), Postives = 200/302 (66.23%), Query Frame = 0


Query: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNL--PPSASP---ASSPLKA 60
           MANLPRFGR  QR   V PP PAA  P+V     + PF   +  P  ASP   +  PL +
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  SPGR-RGPSASPKYRAAAKRVGSSP-AKSARSPPASPATKYSDRGHAQTTPPLSPAKSRR 120
            P +   P ASPKY  +  R+  SP AK+  SPP S   KY +R + +TTPPLSPAKSRR
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120

Query: 121 TATPPLSPLALPR----TANG-ALHSSVLPEVEKKSVLYNKTVEKPAKSGRPS-EHGSGK 180
             TPPLSPLALPR    T NG      V PEVE K ++YNKTVEKP+KS R S E+GS K
Sbjct: 121 AKTPPLSPLALPRNQVFTGNGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGSSK 180

Query: 181 PPQ----AEVINLTGHNVGAVMEINQSSAKHS-AGEIIKKKESETELGGAH-HGNDERKT 240
             Q     EVI L GHNVGAVMEIN+SS  +   GE +KK E+E ++G  H +G++++KT
Sbjct: 181 SHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETE-DVGDVHGYGHEDKKT 240

Query: 241 GA-KKELPGTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNY 283
              KKE P TAFMNSNFQSVNNS+L+DSSC+HRDPGLHLAF D  D G GAIVDG  K+Y
Sbjct: 241 ETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVD-GDGAIVDG-QKSY 299

[Close]

BLAST of Moc05g04880 vs. ExPASy TrEMBL
Match: A0A0A0L320 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58
Identity = 162/301 (53.82%), Postives = 201/301 (66.78%), Query Frame = 0


Query: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSV-PTTQTLQPFEPNLPPSASPASSPLKASPGR 60
           MANLPR GRT QR + V PP PAA  P+V P  +T+        P A+  ++P  ASP R
Sbjct: 1   MANLPRLGRTRQRLSSVPPPVPAAAQPAVEPKYETM--------PYATSITTPAPASPRR 60

Query: 61  RGPS--ASPKYRAA---AKRVGSSP-AKSARSPPASPATKYSDRGHAQTTPPLSPAKSRR 120
             P   +SP  +A    A RV SSP AK+ RSPP S   KY +R + +TTPPL+PAKSR 
Sbjct: 61  ESPRPLSSPSKKATSPFASRVDSSPAAKATRSPPDSIGDKYLERRNGETTPPLTPAKSRP 120

Query: 121 TATPPLSPLALPR----TANG-ALHSSVLPEVEKKSVLYNKTV-EKPAKSGRPSEHGSGK 180
             T PLSPLALPR    T NG      V PEVE K ++YNK   EKP+KS R SEHGSGK
Sbjct: 121 AKTSPLSPLALPRSQVITGNGTTAQPRVQPEVETKGIVYNKAADEKPSKSNRQSEHGSGK 180

Query: 181 PPQAE-----VINLTGHNVGAVMEINQSSAKHS-AGEIIKKKESETELGGAHHGNDERKT 240
               +     V+ L GHNVGAVME+N+SSA +   GE +KKKE+E +     +G++++KT
Sbjct: 181 SVHQKQQKPGVMKLKGHNVGAVMEVNKSSAGYRLGGETLKKKETEDDGDVDGYGHEDKKT 240

Query: 241 GAKKELPGTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYK 283
           G KK+ P +AFMNSNFQSVNNS+L+DSSC HRDPGLHL+F + AD GGGA+VDG +K+YK
Sbjct: 241 GRKKKPPISAFMNSNFQSVNNSLLFDSSCQHRDPGLHLSFPNAAD-GGGAVVDG-DKSYK 291

[Close]

BLAST of Moc05g04880 vs. ExPASy TrEMBL
Match: A0A6J1GHE5 (sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC111454206 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.2e-52
Identity = 156/300 (52.00%), Postives = 186/300 (62.00%), Query Frame = 0


Query: 1   MANLPRFGRTWQRQAVVAPPAPAAVPPSVPTTQTLQPFEPNLPPSASPASSPLKASPGRR 60
           M+N PRFG + QR ++ APP      P+       QPF      S  PA  P        
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKR-SQSLQPAEKP-------T 60

Query: 61  GPSASPKYRAAAKRVGS-SPAKSARSPPASPATKYSDRGHAQTTPPLSPAKSRRTA-TPP 120
            P ASPKY  +  RV S  P K   SPP SPA KY DR  +QT+P  SP++S RT+  PP
Sbjct: 61  SPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDR-LSQTSPLQSPSRSLRTSPPPP 120

Query: 121 LSPLALPRTANGALHSS-----VLPEVEKKSVLYNKTVEKPAKSGRPSEHGSGKPPQ--- 180
             PLALP T   A++ +     + PEVEKKS++YNKTVEK  KS RPSE+GSGKP +   
Sbjct: 121 PPPLALPPTQFTAVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPSEYGSGKPYEKQK 180

Query: 181 -AEVINLTGHNVGAVMEINQSSAKHS-AGEIIKKKESETELGGAHHGNDERKTGAKKE-- 240
             E INL GHNVGAVMEI++SS  H   GE ++K E+E   GG   GN+E+K   KK+  
Sbjct: 181 AVESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETE---GGGRDGNEEKKKEEKKKKE 240

Query: 241 -----LPGTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLAFSDTADGGGGAIVDGHNKNYK 282
                +P TAFMNSNFQSVNNSVLYDSSCSHRDPGLHL F+D ADG G A VDG  K+YK
Sbjct: 241 KKKKNVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAA-VDG-RKSYK 286

[Close]

BLAST of Moc05g04880 vs. TAIR 10
Match: AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 2.8e-08
Identity = 94/331 (28.40%), Postives = 132/331 (39.88%), Query Frame = 0


Query: 12  QRQAVVAPPAPAAVPPSVPTTQTLQPFEPNLPPS--ASPASSPLKASPGRRGPSASPKYR 71
           Q+Q  + PP   A P S P  Q   P+  + PPS   SP + P  A+P    P +S    
Sbjct: 69  QQQQPLTPPRQKAPPTSPP--QERSPY--HSPPSRHMSPPTPPKAATPPPPPPRSSYTSP 128

Query: 72  AAAKRVGSS-PAKSARSPPASPATKYSDRGHAQTTPPLSPAKSRRTATPP--LSPLALPR 131
            + K V  + P +   SPP+   +  S    +  T   S +++ R A  P  LSP +LP 
Sbjct: 129 PSPKEVQEALPPRKPNSPPSPAHSSRSTTSESVKTRSPSESENHRKAPSPRVLSPYSLPA 188

Query: 132 TANGALHSSVLPEVEKKSVL---------------------------------YNKTV-- 191
           +    LHS    E  +K++L                                 YN+    
Sbjct: 189 S---LLHSE--RETTQKNILTAEKTSQTHETNHHNQNHNHDYNQNHNYNQNHSYNQNQNH 248

Query: 192 --EKPAKSGR-PSEHGSGKPPQAEVINLTGHNVGAVMEI--------------NQSSAKH 251
               P K  R PS   S       VI + G N GAVMEI              + S   H
Sbjct: 249 QGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSPQGNKTGGSGTHSSRVSH 308

Query: 252 SAGEIIKKKESETELGGAHHGNDERKT------GAKKELPGTAFMNSNFQSVNNSVLYDS 280
             GE  ++ +S +    +  G  ++KT           LP  AFMNSN Q +NNS++Y+S
Sbjct: 309 GTGEKGRRLQSSSS-SSSDEGEGKKKTTKNVPNKGNSNLPMKAFMNSNVQMINNSIVYNS 368

The following BLAST results are available for this feature:

BLAST of Moc05g04880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147458.1	1.6e-149	100.00	vegetative cell wall protein gp1-like [Momordica charantia]	[more]
XP_038879417.1	5.8e-64	55.19	proline-rich receptor-like protein kinase PERK8 [Benincasa hispida]	[more]
XP_008437851.1	1.5e-59	55.96	PREDICTED: zyxin-like [Cucumis melo] >KAA0048863.1 zyxin-like [Cucumis melo var....	[more]
XP_004133797.1	2.2e-58	53.82	uncharacterized protein LOC101205942 [Cucumis sativus] >KGN56395.1 hypothetical ...	[more]
KAG6597060.1	1.1e-54	53.74	hypothetical protein SDJN03_10240, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Moc05g04880 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g04880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1D2	7.5e-150	100.00	vegetative cell wall protein gp1-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A5A7TZ24	7.2e-60	55.96	Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00760 PE=...	[more]
A0A1S3AV38	7.2e-60	55.96	zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1	[more]
A0A0A0L320	1.0e-58	53.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119300 PE=4 SV=1	[more]
A0A6J1GHE5	4.2e-52	52.00	sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Moc05g04880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46630.1	2.8e-08	28.40	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..228
None	No IPR available	PANTHER	PTHR33472	OS01G0106600 PROTEIN	coord: 166..265
None	No IPR available	PANTHER	PTHR33472:SF1	EXTENSIN-RELATED	coord: 166..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g04880.1	Moc05g04880.1	mRNA