Moc05g04870 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g04870
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	sulfated surface glycoprotein 185-like
Location	chr5: 3354871 .. 3355353 (+)
RNA-Seq Expression	Moc05g04870
Synteny	Moc05g04870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGACGACGGCTCAATCCAGAATCTCGCTGGAGACGAAGCAGAAAGCCGGTCCATACAAAAAGACCGTCGAGAAGGCGGAGAAGTCGGACTGGCCGTCGGAGTACGGATCCGGAAAAGCCGCCGCAGAAGCAGCAGGCGGAGGCTATAAACCTTACCGGACATAACGTAGGCGCGGTCATGGAAGTACGCCAATTCTCCGAATCCGATGATCGTTCAGGCGGAGAAATCGCCAAGAAGAACGAAACAGAAGGCGGCGTCCGCCATGGAAATGATGATGAGAGGAAGAAGGGAAGGAAGGATAAAAGTGACAGAGTAAAGGGATTTCCAAGGACGGCATTCATGAACAGTAATTTTCAAGAAGTGAATAATTCTGTAATGTATGATTCGACGTGCAGGGGCCGTGATCCAGGGCTGCACCTTGATTTCTCCGGGAAGTCGAAGGATGATGGAGCCATTTTCGACGGCGCCCAGAACTCTTAA

mRNA sequence

ATGCGACGACGGCTCAATCCAGAATCTCGCTGGAGACGAAGCAGAAAGCCGGTCCATACAAAAAGACCGTCGAGAAGGCGGAGAAGTCGGACTGGCCGTCGGAGTACGGATCCGGAAAAGCCGCCGCAGAAGCAGCAGGCGGAGGCTATAAACCTTACCGGACATAACGTAGGCGCGGTCATGGAAGTACGCCAATTCTCCGAATCCGATGATCGTTCAGGCGGAGAAATCGCCAAGAAGAACGAAACAGAAGGCGGCGTCCGCCATGGAAATGATGATGAGAGGAAGAAGGGAAGGAAGGATAAAAGTGACAGAGTAAAGGGATTTCCAAGGACGGCATTCATGAACAGTAATTTTCAAGAAGTGAATAATTCTGTAATGTATGATTCGACGTGCAGGGGCCGTGATCCAGGGCTGCACCTTGATTTCTCCGGGAAGTCGAAGGATGATGGAGCCATTTTCGACGGCGCCCAGAACTCTTAA

Coding sequence (CDS)

ATGCGACGACGGCTCAATCCAGAATCTCGCTGGAGACGAAGCAGAAAGCCGGTCCATACAAAAAGACCGTCGAGAAGGCGGAGAAGTCGGACTGGCCGTCGGAGTACGGATCCGGAAAAGCCGCCGCAGAAGCAGCAGGCGGAGGCTATAAACCTTACCGGACATAACGTAGGCGCGGTCATGGAAGTACGCCAATTCTCCGAATCCGATGATCGTTCAGGCGGAGAAATCGCCAAGAAGAACGAAACAGAAGGCGGCGTCCGCCATGGAAATGATGATGAGAGGAAGAAGGGAAGGAAGGATAAAAGTGACAGAGTAAAGGGATTTCCAAGGACGGCATTCATGAACAGTAATTTTCAAGAAGTGAATAATTCTGTAATGTATGATTCGACGTGCAGGGGCCGTGATCCAGGGCTGCACCTTGATTTCTCCGGGAAGTCGAAGGATGATGGAGCCATTTTCGACGGCGCCCAGAACTCTTAA

Protein sequence

MRRRLNPESRWRRSRKPVHTKRPSRRRRSRTGRRSTDPEKPPQKQQAEAINLTGHNVGAVMEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKGRKDKSDRVKGFPRTAFMNSNFQEVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQNS

Homology

[Close]

BLAST of Moc05g04870 vs. NCBI nr
Match: XP_022147499.1 (uncharacterized protein LOC111016407 [Momordica charantia])

HSP 1 Score: 308.9 bits (790), Expect = 2.5e-80
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MRRRLNPESRWRRSRKPVHTKRPSRRRRSRTGRRSTDPEKPPQKQQAEAINLTGHNVGAV 60
           MRRRLNPESRWRRSRKPVHTKRPSRRRRSRTGRRSTDPEKPPQKQQAEAINLTGHNVGAV
Sbjct: 1   MRRRLNPESRWRRSRKPVHTKRPSRRRRSRTGRRSTDPEKPPQKQQAEAINLTGHNVGAV 60

Query: 61  MEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKGRKDKSDRVKGFPRTAFMNSNFQ 120
           MEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKGRKDKSDRVKGFPRTAFMNSNFQ
Sbjct: 61  MEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKGRKDKSDRVKGFPRTAFMNSNFQ 120

Query: 121 EVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQNS 161
           EVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQNS
Sbjct: 121 EVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQNS 160

[Close]

BLAST of Moc05g04870 vs. NCBI nr
Match: XP_022951357.1 (sulfated surface glycoprotein 185-like [Cucurbita moschata])

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-25
Identity = 69/121 (57.02%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 40  KPPQKQQA-EAINLTGHNVGAVMEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKG 99
           KP +KQ+A E+INL GHNVGAVME+ + S    R GGE  +KNETEGG R GN++++K+ 
Sbjct: 165 KPYEKQKAVESINLAGHNVGAVMEIDK-SSVGHRLGGETVRKNETEGGGRDGNEEKKKEE 224

Query: 100 RKDKSDRVKGFPRTAFMNSNFQEVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQ 159
           +K K  + K  P TAFMNSNFQ VNNSV+YDS+C  RDPGLHL F+  +  DGA  DG +
Sbjct: 225 KKKKEKKKKNVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRK 284

[Close]

BLAST of Moc05g04870 vs. NCBI nr
Match: XP_011650663.1 (gibberellin-regulated protein 14 [Cucumis sativus] >KGN56396.1 hypothetical protein Csa_011358 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 4.4e-24
Identity = 71/121 (58.68%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 40  KPPQKQQAEAINLTGHNVGAVMEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKGR 99
           KPP   QA+AINLTG N+GAVM++ QF  SD  SGGE+ +K ET+ GV+  ND E     
Sbjct: 169 KPPPSLQAKAINLTGDNIGAVMKINQF--SDKISGGEVTRKIETKTGVQQENDME----- 228

Query: 100 KDKSDRVKGFPRTAFMNSNFQEVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQN 159
             KS R   FP T   NSNFQEVNNSVMY+S+C GRDPGLHLDFSG+ KD+ A  DG + 
Sbjct: 229 --KSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPGLHLDFSGQ-KDEAATVDGNKK 279

Query: 160 S 161
           S
Sbjct: 289 S 279

[Close]

BLAST of Moc05g04870 vs. NCBI nr
Match: KAG7028529.1 (hypothetical protein SDJN02_09710 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-23
Identity = 70/124 (56.45%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 40  KPPQKQQ-AEAINLTGHNVGAVMEVRQFSESDDRSGGEIAKKNETEGG--VRHGNDDERK 99
           KP +KQ+ AE+INL GHNVGAVME+ + S    R GGE  +KNETEGG   R G ++++K
Sbjct: 165 KPHEKQKAAESINLAGHNVGAVMEIDK-SSVGHRLGGETVRKNETEGGDLGRDGKEEKKK 224

Query: 100 KGRKDKSD-RVKGFPRTAFMNSNFQEVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFD 159
           K +K+K + + K  P TAFMNSNFQ VNNSV+YDS+C  RDPGLHL F+  +  DGA  D
Sbjct: 225 KEKKEKKETKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVD 284

[Close]

BLAST of Moc05g04870 vs. NCBI nr
Match: XP_023538978.1 (leucine-rich repeat extensin-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-22
Identity = 70/126 (55.56%), Postives = 87/126 (69.05%), Query Frame = 0


Query: 40  KPPQKQQ-AEAINLTGHNVGAVMEVRQFSESDDRSGGEIAKKNETEGG--VRHGNDD--- 99
           KP +KQ+ AE+INL GHNVGAVME+ + S    R GGE  +KNETEGG   R GN++   
Sbjct: 162 KPHEKQKAAESINLAGHNVGAVMEIDK-SSVGHRLGGETVRKNETEGGDVGRDGNEEKKK 221

Query: 100 ERKKGRKDKSDRVKGFPRTAFMNSNFQEVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAI 159
           E KK ++ K  + K  P TAFMNSNFQ VNNSV+YDS+C  RDPGLHL F+  +  DGA 
Sbjct: 222 EEKKKKEKKEKKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAA 281

[Close]

BLAST of Moc05g04870 vs. ExPASy TrEMBL
Match: A0A6J1D170 (uncharacterized protein LOC111016407 OS=Momordica charantia OX=3673 GN=LOC111016407 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MRRRLNPESRWRRSRKPVHTKRPSRRRRSRTGRRSTDPEKPPQKQQAEAINLTGHNVGAV 60
           MRRRLNPESRWRRSRKPVHTKRPSRRRRSRTGRRSTDPEKPPQKQQAEAINLTGHNVGAV
Sbjct: 1   MRRRLNPESRWRRSRKPVHTKRPSRRRRSRTGRRSTDPEKPPQKQQAEAINLTGHNVGAV 60

Query: 61  MEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKGRKDKSDRVKGFPRTAFMNSNFQ 120
           MEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKGRKDKSDRVKGFPRTAFMNSNFQ
Sbjct: 61  MEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKGRKDKSDRVKGFPRTAFMNSNFQ 120

Query: 121 EVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQNS 161
           EVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQNS
Sbjct: 121 EVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQNS 160

[Close]

BLAST of Moc05g04870 vs. ExPASy TrEMBL
Match: A0A6J1GHE5 (sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC111454206 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 8.6e-26
Identity = 69/121 (57.02%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 40  KPPQKQQA-EAINLTGHNVGAVMEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKG 99
           KP +KQ+A E+INL GHNVGAVME+ + S    R GGE  +KNETEGG R GN++++K+ 
Sbjct: 165 KPYEKQKAVESINLAGHNVGAVMEIDK-SSVGHRLGGETVRKNETEGGGRDGNEEKKKEE 224

Query: 100 RKDKSDRVKGFPRTAFMNSNFQEVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQ 159
           +K K  + K  P TAFMNSNFQ VNNSV+YDS+C  RDPGLHL F+  +  DGA  DG +
Sbjct: 225 KKKKEKKKKNVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRK 284

[Close]

BLAST of Moc05g04870 vs. ExPASy TrEMBL
Match: A0A0A0L8G8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.1e-24
Identity = 71/121 (58.68%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 40  KPPQKQQAEAINLTGHNVGAVMEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKGR 99
           KPP   QA+AINLTG N+GAVM++ QF  SD  SGGE+ +K ET+ GV+  ND E     
Sbjct: 169 KPPPSLQAKAINLTGDNIGAVMKINQF--SDKISGGEVTRKIETKTGVQQENDME----- 228

Query: 100 KDKSDRVKGFPRTAFMNSNFQEVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGAIFDGAQN 159
             KS R   FP T   NSNFQEVNNSVMY+S+C GRDPGLHLDFSG+ KD+ A  DG + 
Sbjct: 229 --KSRRETEFPMTPITNSNFQEVNNSVMYNSSCSGRDPGLHLDFSGQ-KDEAATVDGNKK 279

Query: 160 S 161
           S
Sbjct: 289 S 279

[Close]

BLAST of Moc05g04870 vs. ExPASy TrEMBL
Match: A0A6J1ICG8 (wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita maxima OX=3661 GN=LOC111473600 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 8.9e-23
Identity = 73/146 (50.00%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 16  KPVHTKRPSRRRRSRTGRRSTDPEKPPQKQQAEAINLTGHNVGAVMEVRQFSESDDRSGG 75
           KPV + RP      ++  +         ++ AE+INL GHNVGAVME+ + S S  R GG
Sbjct: 150 KPVKSDRPLEYGSGKSHEK---------QKTAESINLAGHNVGAVMEIDKLSAS-HRLGG 209

Query: 76  EIAKKNETEG--GVRHGNDDERKKGRKDKSDRVKGFPRTAFMNSNFQEVNNSVMYDSTCR 135
           E  +KN+TEG  G R GN++++KK +KDK  + K  P TAFMNSNFQ VNNSV+YDS+C 
Sbjct: 210 ETVRKNKTEGGDGGRDGNEEKKKKEKKDK--KKKKVPMTAFMNSNFQSVNNSVLYDSSCN 269

Query: 136 GRDPGLHLDFSGKSKDDGAIFDGAQN 160
            RDPGLHL F+  +  DGA  DG +N
Sbjct: 270 HRDPGLHLKFADAADGDGAAVDGRKN 283

[Close]

BLAST of Moc05g04870 vs. ExPASy TrEMBL
Match: A0A5D3DB96 (WW domain-binding protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00770 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.5e-22
Identity = 66/112 (58.93%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 41  PPQKQQAEAINLTGHNVGAVMEVRQFSESDDRSGGEIAKKNETEGGVRHGNDDERKKGRK 100
           PP   QA+AINL G N+GAVM++ QF  SD  SGGE+ +K ETE GV+  ND+E      
Sbjct: 174 PPPSLQAKAINLAGDNIGAVMKINQF--SDKSSGGEVTRKIETETGVQQENDEE------ 233

Query: 101 DKSDRVKGFPRTAFMNSNFQEVNNSVMYDSTCRGRDPGLHLDFSGKSKDDGA 153
            KS R   FP T   NSNFQEVNNSV+Y+S+C  RDPGLHLDFSGK KD+ A
Sbjct: 234 -KSRRETEFPMTPITNSNFQEVNNSVVYNSSCNSRDPGLHLDFSGK-KDEAA 275

[Close]

BLAST of Moc05g04870 vs. TAIR 10
Match: AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-07
Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = 0


Query: 50  INLTGHNVGAVMEVRQFSESDDRSG------------GEIAKKNETEGGVRHGNDDERKK 109
           I + G N GAVME+ +  + +   G            GE  ++ ++         + +KK
Sbjct: 265 ITIAGENKGAVMEILRSPQGNKTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKK 324

Query: 110 GRKDKSDR-VKGFPRTAFMNSNFQEVNNSVMYDSTCRGRDPGLHLDFSGKSKDD 151
             K+  ++     P  AFMNSN Q +NNS++Y+ST    DPG+HL  S K   D
Sbjct: 325 TTKNVPNKGNSNLPMKAFMNSNVQMINNSIVYNSTASHHDPGVHLKISRKPGSD 378

The following BLAST results are available for this feature:

BLAST of Moc05g04870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147499.1	2.5e-80	100.00	uncharacterized protein LOC111016407 [Momordica charantia]	[more]
XP_022951357.1	1.8e-25	57.02	sulfated surface glycoprotein 185-like [Cucurbita moschata]	[more]
XP_011650663.1	4.4e-24	58.68	gibberellin-regulated protein 14 [Cucumis sativus] >KGN56396.1 hypothetical prot...	[more]
KAG7028529.1	1.7e-23	56.45	hypothetical protein SDJN02_09710 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023538978.1	1.8e-22	55.56	leucine-rich repeat extensin-like protein 2 isoform X2 [Cucurbita pepo subsp. pe...	[more]

BLAST of Moc05g04870 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc05g04870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D170	1.2e-80	100.00	uncharacterized protein LOC111016407 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1GHE5	8.6e-26	57.02	sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A0A0L8G8	2.1e-24	58.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1	[more]
A0A6J1ICG8	8.9e-23	50.00	wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita maxima OX=366...	[more]
A0A5D3DB96	1.5e-22	58.93	WW domain-binding protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Moc05g04870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46630.1	2.3e-07	31.58	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..108
None	No IPR available	PANTHER	PTHR33472	OS01G0106600 PROTEIN	coord: 23..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g04870.1	Moc05g04870.1	mRNA