Moc05g04560 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g04560
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Non-specific lipid-transfer protein
Location	chr5: 3180219 .. 3181316 (-)
RNA-Seq Expression	Moc05g04560
Synteny	Moc05g04560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGAACCCACAATCGGCGCACGATGATCAGTGCCCTAGCCTTCGTCGCCATCTTCACAAGCCCCATGATGATCGCCCTGTCCCAAACTGACGACGAGGCAGCTTGCGAACCGGTGATGCAGGAGCTGACGCCATGTCTCAGCTTCATCAAAGGCAGTGACAGCGAGTTCGGTGGTCCGAAACCGTCGCCGGAGTGCTGTAACGGCGTAAAAAAGTTGATCAGCGACACCAAAACGAAGGCGGACAAGGTAGCTACGTGCGAGTGTCTGAAGAAGGCTTTGGGGATGATCGGAACTTATGATCCGAGTCGCATCCCTTTGATTACGAAGAATTGCGGAATCGCCATCCAAATCCCTCCCATTGATAATTCCACCGACTGCTCGAAGTAATCAAAATTACATCTTTTGGCTTTCTTCTTCTTCTTTGCTCTGAGTTTAATTTCCACGACAATTTTTTGTGAAGATAAGATAAGCAAGCTTTTGGAGCTAAAATATTTTGTTTGTAAAAAAATTAACTTAGTTTATTAATTATTTCAAAAATACTTTGAAAATATTTAACCAATTTTCCAAAAGAAAAAAAAAGTACTAATTTAGTTGCTGAAATTTCTTCCTTGGTCTATTTGTCTCTATAACATGTGATTTTAATTTTAATTTTAATTTTTTATTTTTGAGAAAAACATGTGACCCAAAAAAGGAGGGAAAAAAACTACTTTTCAATTTGTTTAGTTCACTAACAATTAAATATTAAATGTTTTATCTTTCCGACATATTGACTCTTTTTGTTTTTGTTTTCTTTTATAAAAGCATGTGACTCTAAAAGGAGGACAAAATATATATTTTCTTAATTTGTTACTATTTCTAAGCTATTACTTCTCAACTTTAAAAACAAAACAACATCTTTTATTTTTTGAATGAATTTGAAAACTAGCCCAAAATTTAGAATTTGTGTAAAAAATACTTTGATATAAAGAAAAAAAGAAATGCATAATGGAATTATTGGGTGCTAATTTTGTTTGTTTGTGTTGTTGGCAATGGCATTGCAGGATTGAGGGACTCCAATTTGGAAGTGCTGTGTTATATGAGCTTGGGAATTAA

mRNA sequence

ATGGCAGGAACCCACAATCGGCGCACGATGATCAGTGCCCTAGCCTTCGTCGCCATCTTCACAAGCCCCATGATGATCGCCCTGTCCCAAACTGACGACGAGGCAGCTTGCGAACCGGTGATGCAGGAGCTGACGCCATGTCTCAGCTTCATCAAAGGCAGTGACAGCGAGTTCGGTGGTCCGAAACCGTCGCCGGAGTGCTGTAACGGCGTAAAAAAGTTGATCAGCGACACCAAAACGAAGGCGGACAAGGTAGCTACGTGCGAGTGTCTGAAGAAGGCTTTGGGGATGATCGGAACTTATGATCCGAGTCGCATCCCTTTGATTACGAAGAATTGCGGAATCGCCATCCAAATCCCTCCCATTGATAATTCCACCGACTGCTCGAAGATTGAGGGACTCCAATTTGGAAGTGCTGTGTTATATGAGCTTGGGAATTAA

Coding sequence (CDS)

ATGGCAGGAACCCACAATCGGCGCACGATGATCAGTGCCCTAGCCTTCGTCGCCATCTTCACAAGCCCCATGATGATCGCCCTGTCCCAAACTGACGACGAGGCAGCTTGCGAACCGGTGATGCAGGAGCTGACGCCATGTCTCAGCTTCATCAAAGGCAGTGACAGCGAGTTCGGTGGTCCGAAACCGTCGCCGGAGTGCTGTAACGGCGTAAAAAAGTTGATCAGCGACACCAAAACGAAGGCGGACAAGGTAGCTACGTGCGAGTGTCTGAAGAAGGCTTTGGGGATGATCGGAACTTATGATCCGAGTCGCATCCCTTTGATTACGAAGAATTGCGGAATCGCCATCCAAATCCCTCCCATTGATAATTCCACCGACTGCTCGAAGATTGAGGGACTCCAATTTGGAAGTGCTGTGTTATATGAGCTTGGGAATTAA

Protein sequence

MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGGPKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIPPIDNSTDCSKIEGLQFGSAVLYELGN

Homology

[Close]

BLAST of Moc05g04560 vs. NCBI nr
Match: XP_022147518.1 (non-specific lipid-transfer protein-like [Momordica charantia])

HSP 1 Score: 300.4 bits (768), Expect = 8.2e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60
           MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG
Sbjct: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60

Query: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120
           PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP
Sbjct: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120

Query: 121 PIDNSTDCSKIEGLQFGSAVLYELGN 147
           PIDNSTDCSKIEGLQFGSAVLYELGN
Sbjct: 121 PIDNSTDCSKIEGLQFGSAVLYELGN 146

[Close]

BLAST of Moc05g04560 vs. NCBI nr
Match: XP_038891281.1 (non-specific lipid-transfer protein Cw18-like [Benincasa hispida])

HSP 1 Score: 216.5 bits (550), Expect = 1.6e-52
Identity = 100/146 (68.49%), Postives = 117/146 (80.14%), Query Frame = 0


Query: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60
           M+G  N R+ + ALAFVA+ T  +M+ALSQ +D  +C PV QEL+PCL FIKGSDS FGG
Sbjct: 1   MSGIFNLRSTMGALAFVAVLTCSLMVALSQNEDVESCVPVAQELSPCLGFIKGSDSAFGG 60

Query: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120
             PSP CC+GVKKL+ D KTK DKV  CEC+KK+L MIG YDPSRIPLI K CGI +QIP
Sbjct: 61  EHPSPSCCSGVKKLVGDAKTKKDKVDLCECIKKSLSMIGPYDPSRIPLIPKECGIPVQIP 120

Query: 121 PIDNSTDCSKIEGLQFGSAVLYELGN 147
           PIDNSTDCSK+EGLQFGSA LY+LG+
Sbjct: 121 PIDNSTDCSKVEGLQFGSAFLYKLGD 146

[Close]

BLAST of Moc05g04560 vs. NCBI nr
Match: XP_022924453.1 (non-specific lipid-transfer protein-like [Cucurbita moschata] >KAG6582670.1 hypothetical protein SDJN03_22672, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 196.1 bits (497), Expect = 2.2e-46
Identity = 94/144 (65.28%), Postives = 108/144 (75.00%), Query Frame = 0


Query: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60
           M+G  + R+ I ALAFVAIFT   M+ LSQ+ D  AC PV+QEL+PCL FIKGSDS FGG
Sbjct: 1   MSGIFHLRSTIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGG 60

Query: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120
             PSP CC GV KL+ D KTK D+V  CEC+K +L MIG YDPSRIPLI ++CGI  QIP
Sbjct: 61  ENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP 120

Query: 121 PIDNSTDCSKIEGLQFGSAVLYEL 145
           PID+STDCSK E  QFGSA  YEL
Sbjct: 121 PIDSSTDCSKAEDYQFGSAFSYEL 144

[Close]

BLAST of Moc05g04560 vs. NCBI nr
Match: XP_022980045.1 (non-specific lipid-transfer protein-like [Cucurbita maxima])

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-46
Identity = 94/144 (65.28%), Postives = 108/144 (75.00%), Query Frame = 0


Query: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60
           M+G  + R+ I ALAFVAIF  P M+ LSQ+ D  AC PV+QEL+PCL FIKGSDS FGG
Sbjct: 1   MSGIFHLRSTIGALAFVAIFICPQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSGFGG 60

Query: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120
             PSP CC GV KL+ D KTK D+V  CEC+K +L MIG YDPSRIPLI ++CGI  QIP
Sbjct: 61  ENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP 120

Query: 121 PIDNSTDCSKIEGLQFGSAVLYEL 145
           PID+STDCSK EG QFGSA   EL
Sbjct: 121 PIDSSTDCSKAEGYQFGSAFSSEL 144

[Close]

BLAST of Moc05g04560 vs. NCBI nr
Match: XP_022974952.1 (non-specific lipid-transfer protein 3-like [Cucurbita maxima])

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-45
Identity = 91/146 (62.33%), Postives = 110/146 (75.34%), Query Frame = 0


Query: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60
           M+G +N R MISAL F+A+ TS MM+ALSQ  D  +C  V QEL+PCLSFIKGSD  F G
Sbjct: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60

Query: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120
             P P CC+GV KL +D KTK DKV  CEC+KK+L MIG YDP+RIP I + CGI +QIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120

Query: 121 PIDNSTDCSKIEGLQFGSAVLYELGN 147
           PIDNSTDCS++EG +FGS +  E+GN
Sbjct: 121 PIDNSTDCSEVEGFEFGSGMSNEVGN 146

[Close]

BLAST of Moc05g04560 vs. ExPASy Swiss-Prot
Match: O04004 (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia OX=4212 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 45/119 (37.82%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 13  ALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGGPKPSPECCNGVK 72
           A+  + +   P M A S T     C+ V   L PC  F+ G +       PS  CC GV 
Sbjct: 11  AVGLLLVSWRPTMFAASPT-----CDTVQNILAPCAGFLTGQE-------PSKACCTGVN 70

Query: 73  KLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIPPIDNSTDCSKI 132
            L +  KTKAD+VA C C+K+    I  YDP R+PL++  CG+    P +D + DCSK+
Sbjct: 71  NLNNSRKTKADRVAVCNCIKELTKSI-AYDPKRMPLLSTKCGVKPDFPAVDKNLDCSKL 116

[Close]

BLAST of Moc05g04560 vs. ExPASy Swiss-Prot
Match: O04403 (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica OX=33127 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.6e-15
Identity = 46/133 (34.59%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 7   RRTMISALAFVA---IFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGGPKP 66
           R   ++AL  +A    +TS   +A +    E  C  V+  + PCL F+KG + E     P
Sbjct: 2   RTVSMAALVVIAAALAWTSSAELASAPAPGEGPCGKVVHHIMPCLKFVKGEEKE-----P 61

Query: 67  SPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIPPID 126
           S  CC+G KKL  + KT   K   C+C+  A   I       +  + K CGI   +PPI 
Sbjct: 62  SKSCCSGTKKLSEEVKTTEQKREACKCIVAATKGISGIKNELVAEVPKKCGITTTLPPIT 121

Query: 127 NSTDCSKIEGLQF 137
              DCSKIE   F
Sbjct: 122 ADFDCSKIESTIF 129

[Close]

BLAST of Moc05g04560 vs. ExPASy Swiss-Prot
Match: Q43871 (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare OX=4513 GN=CW18 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13
Identity = 47/124 (37.90%), Postives = 64/124 (51.61%), Query Frame = 0


Query: 8   RTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGGPKPSPEC 67
           RT  + LA VA+  + +++A    D    C  V   L PC ++ KGS     G  PS  C
Sbjct: 3   RTAATKLALVALVAAMLLVA---ADAAITCGQVSSALGPCAAYAKGS-----GTSPSAGC 62

Query: 68  CNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIPPIDNSTD 127
           C+GVK+L    ++ ADK ATC CLK    + G Y+  R   I   CG+++    I  S D
Sbjct: 63  CSGVKRLAGLARSTADKQATCRCLK---SVAGAYNAGRAAGIPSRCGVSVPY-TISASVD 114

Query: 128 CSKI 132
           CSKI
Sbjct: 123 CSKI 114

[Close]

BLAST of Moc05g04560 vs. ExPASy Swiss-Prot
Match: A0AT33 (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris OX=3864 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 24  MMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGGPKPSPECCNGVKKLISDTKTKAD 83
           M++     +   +C  V  +L+PCL+++       GGP PSP+CC GVKKL++   T  D
Sbjct: 8   MVVIAPMAEGAISCGAVTSDLSPCLTYLT------GGPGPSPQCCGGVKKLLAAANTTPD 67

Query: 84  KVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIPPIDNSTDCSKIE 133
           + A C CLK A G I   + +    +   CG+ I    I  ST+C+ ++
Sbjct: 68  RQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPY-KISTSTNCNTVK 109

[Close]

BLAST of Moc05g04560 vs. ExPASy Swiss-Prot
Match: A0AT32 (Non-specific lipid-transfer protein 6 OS=Lens culinaris OX=3864 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 37/109 (33.94%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 24  MMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGGPKPSPECCNGVKKLISDTKTKAD 83
           M++     +   +C  V  +L+PCL+++       GGP PSP+CC GVKKL++   T  D
Sbjct: 16  MVVIAPMAEGAISCGAVTSDLSPCLTYLT------GGPGPSPQCCGGVKKLLAAANTTPD 75

Query: 84  KVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIPPIDNSTDCSKIE 133
           + A C CLK A G I   + +    +   CG+ I    I  ST+C+ ++
Sbjct: 76  RQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPY-KISTSTNCNTVK 117

[Close]

BLAST of Moc05g04560 vs. ExPASy TrEMBL
Match: A0A6J1D1I6 (Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC111016422 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.0e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60
           MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG
Sbjct: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60

Query: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120
           PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP
Sbjct: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120

Query: 121 PIDNSTDCSKIEGLQFGSAVLYELGN 147
           PIDNSTDCSKIEGLQFGSAVLYELGN
Sbjct: 121 PIDNSTDCSKIEGLQFGSAVLYELGN 146

[Close]

BLAST of Moc05g04560 vs. ExPASy TrEMBL
Match: A0A6J1ECH4 (non-specific lipid-transfer protein-like OS=Cucurbita moschata OX=3662 GN=LOC111431953 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.1e-46
Identity = 94/144 (65.28%), Postives = 108/144 (75.00%), Query Frame = 0


Query: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60
           M+G  + R+ I ALAFVAIFT   M+ LSQ+ D  AC PV+QEL+PCL FIKGSDS FGG
Sbjct: 1   MSGIFHLRSTIGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGG 60

Query: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120
             PSP CC GV KL+ D KTK D+V  CEC+K +L MIG YDPSRIPLI ++CGI  QIP
Sbjct: 61  ENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP 120

Query: 121 PIDNSTDCSKIEGLQFGSAVLYEL 145
           PID+STDCSK E  QFGSA  YEL
Sbjct: 121 PIDSSTDCSKAEDYQFGSAFSYEL 144

[Close]

BLAST of Moc05g04560 vs. ExPASy TrEMBL
Match: A0A6J1IV21 (non-specific lipid-transfer protein-like OS=Cucurbita maxima OX=3661 GN=LOC111479562 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.4e-46
Identity = 94/144 (65.28%), Postives = 108/144 (75.00%), Query Frame = 0


Query: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60
           M+G  + R+ I ALAFVAIF  P M+ LSQ+ D  AC PV+QEL+PCL FIKGSDS FGG
Sbjct: 1   MSGIFHLRSTIGALAFVAIFICPQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSGFGG 60

Query: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120
             PSP CC GV KL+ D KTK D+V  CEC+K +L MIG YDPSRIPLI ++CGI  QIP
Sbjct: 61  ENPSPSCCTGVGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIP 120

Query: 121 PIDNSTDCSKIEGLQFGSAVLYEL 145
           PID+STDCSK EG QFGSA   EL
Sbjct: 121 PIDSSTDCSKAEGYQFGSAFSSEL 144

[Close]

BLAST of Moc05g04560 vs. ExPASy TrEMBL
Match: A0A6J1IBN9 (non-specific lipid-transfer protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111473775 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.2e-46
Identity = 91/146 (62.33%), Postives = 110/146 (75.34%), Query Frame = 0


Query: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60
           M+G +N R MISAL F+A+ TS MM+ALSQ  D  +C  V QEL+PCLSFIKGSD  F G
Sbjct: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60

Query: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120
             P P CC+GV KL +D KTK DKV  CEC+KK+L MIG YDP+RIP I + CGI +QIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120

Query: 121 PIDNSTDCSKIEGLQFGSAVLYELGN 147
           PIDNSTDCS++EG +FGS +  E+GN
Sbjct: 121 PIDNSTDCSEVEGFEFGSGMSNEVGN 146

[Close]

BLAST of Moc05g04560 vs. ExPASy TrEMBL
Match: A0A6J1FDZ9 (non-specific lipid-transfer protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111444661 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.6e-45
Identity = 90/146 (61.64%), Postives = 110/146 (75.34%), Query Frame = 0


Query: 1   MAGTHNRRTMISALAFVAIFTSPMMIALSQTDDEAACEPVMQELTPCLSFIKGSDSEFGG 60
           M+G +N R MISAL F+A+ TS MM+ALSQ  D  +C  V QEL+PCLSFIKGSD  F G
Sbjct: 1   MSGIYNLRLMISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLG 60

Query: 61  PKPSPECCNGVKKLISDTKTKADKVATCECLKKALGMIGTYDPSRIPLITKNCGIAIQIP 120
             P P CC+GV KL +D KTK DKV  CEC+KK+L MIG YDP+RIP I + CGI +QIP
Sbjct: 61  ENPPPSCCSGVTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIP 120

Query: 121 PIDNSTDCSKIEGLQFGSAVLYELGN 147
           PIDNST+CS++EG +FGS +  E+GN
Sbjct: 121 PIDNSTNCSEVEGFEFGSGLPNEVGN 146

[Close]

BLAST of Moc05g04560 vs. TAIR 10
Match: AT2G18370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 31  TDDEAACEPVMQELTPCLSFIKGSDSEFGGPKPSPECCNGVKKLISDTKTKADKVATCEC 90
           ++   +C  V+Q+L PC+S++       G   P   CC+GVK L + T T ADK A C+C
Sbjct: 22  SESAISCSVVLQDLQPCVSYLTS-----GSGNPPETCCDGVKSLAAATTTSADKKAACQC 81

Query: 91  LKKALGMIGTYDPSRIPLITKNCGIAIQIPPIDNS--TDCSKI 132
           +K     + T  P     +  NCG ++   P+D S   DC+ +
Sbjct: 82  IKSVANSV-TVKPELAQALASNCGASL---PVDASPTVDCTTV 115

[Close]

BLAST of Moc05g04560 vs. TAIR 10
Match: AT2G15325.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.5e-08
Identity = 32/96 (33.33%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 37  CEPVMQELTPCLSFIKGSDSEFGGPKPSPECCNGVKKLISDTKTKADKVATCECLKKALG 96
           CE     LTPCL ++          KPSPECC+G+ K+    KT  D+   C CL     
Sbjct: 31  CEEATNLLTPCLRYLWAPPE----AKPSPECCSGLDKVNKGVKTYDDRHDMCICLSSE-A 90

Query: 97  MIGTYDPSRIPLITKNCGIAIQIPPIDNSTDCSKIE 133
            I + D  +   + K C +A+   P+    DCS I+
Sbjct: 91  AITSADQYKFDNLPKLCNVAL-FAPVGPKFDCSTIK 120

[Close]

BLAST of Moc05g04560 vs. TAIR 10
Match: AT2G15050.1 (lipid transfer protein )

HSP 1 Score: 51.6 bits (122), Expect = 6.2e-07
Identity = 28/83 (33.73%), Postives = 38/83 (45.78%), Query Frame = 0


Query: 36  ACEPVMQELTPCLSFIKGSDSEFGGPKPSPECCNGVKKLISDTKTKADKVATCECLKKAL 95
           +C  V   L PC  ++       G   P P+CCNGV+KL     T  D+   C C+K A 
Sbjct: 28  SCGEVNSNLKPCTGYLTNG----GITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAA 87

Query: 96  GMIGT-YDPSRIPLITKNCGIAI 118
             +G   +  R   I + CGI I
Sbjct: 88  RNVGPGLNADRAAGIPRRCGIKI 106

[Close]

BLAST of Moc05g04560 vs. TAIR 10
Match: AT2G15050.2 (lipid transfer protein )

HSP 1 Score: 51.6 bits (122), Expect = 6.2e-07
Identity = 28/83 (33.73%), Postives = 38/83 (45.78%), Query Frame = 0


Query: 36  ACEPVMQELTPCLSFIKGSDSEFGGPKPSPECCNGVKKLISDTKTKADKVATCECLKKAL 95
           +C  V   L PC  ++       G   P P+CCNGV+KL     T  D+   C C+K A 
Sbjct: 28  SCGEVNSNLKPCTGYLTNG----GITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAA 87

Query: 96  GMIGT-YDPSRIPLITKNCGIAI 118
             +G   +  R   I + CGI I
Sbjct: 88  RNVGPGLNADRAAGIPRRCGIKI 106

[Close]

BLAST of Moc05g04560 vs. TAIR 10
Match: AT2G15050.3 (lipid transfer protein )

HSP 1 Score: 51.6 bits (122), Expect = 6.2e-07
Identity = 28/83 (33.73%), Postives = 38/83 (45.78%), Query Frame = 0


Query: 36  ACEPVMQELTPCLSFIKGSDSEFGGPKPSPECCNGVKKLISDTKTKADKVATCECLKKAL 95
           +C  V   L PC  ++       G   P P+CCNGV+KL     T  D+   C C+K A 
Sbjct: 28  SCGEVNSNLKPCTGYLTNG----GITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAA 87

Query: 96  GMIGT-YDPSRIPLITKNCGIAI 118
             +G   +  R   I + CGI I
Sbjct: 88  RNVGPGLNADRAAGIPRRCGIKI 106

The following BLAST results are available for this feature:

BLAST of Moc05g04560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147518.1	8.2e-78	100.00	non-specific lipid-transfer protein-like [Momordica charantia]	[more]
XP_038891281.1	1.6e-52	68.49	non-specific lipid-transfer protein Cw18-like [Benincasa hispida]	[more]
XP_022924453.1	2.2e-46	65.28	non-specific lipid-transfer protein-like [Cucurbita moschata] >KAG6582670.1 hypo...	[more]
XP_022980045.1	2.8e-46	65.28	non-specific lipid-transfer protein-like [Cucurbita maxima]	[more]
XP_022974952.1	1.1e-45	62.33	non-specific lipid-transfer protein 3-like [Cucurbita maxima]	[more]

BLAST of Moc05g04560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04004	1.4e-16	37.82	Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia OX=4212 PE=1 SV=1	[more]
O04403	4.6e-15	34.59	Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica OX=33127 PE...	[more]
Q43871	1.1e-13	37.90	Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare OX=4513 GN=CW18 PE=1...	[more]
A0AT33	1.5e-13	33.94	Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris OX=3864 PE=1 ...	[more]
A0AT32	1.5e-13	33.94	Non-specific lipid-transfer protein 6 OS=Lens culinaris OX=3864 PE=1 SV=1	[more]

BLAST of Moc05g04560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1I6	4.0e-78	100.00	Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC1110164...	[more]
A0A6J1ECH4	1.1e-46	65.28	non-specific lipid-transfer protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IV21	1.4e-46	65.28	non-specific lipid-transfer protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1IBN9	5.2e-46	62.33	non-specific lipid-transfer protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1FDZ9	2.6e-45	61.64	non-specific lipid-transfer protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Moc05g04560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18370.1	1.9e-11	33.01	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G15325.1	9.5e-08	33.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G15050.1	6.2e-07	33.73	lipid transfer protein	[more]
AT2G15050.2	6.2e-07	33.73	lipid transfer protein	[more]
AT2G15050.3	6.2e-07	33.73	lipid transfer protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 36..52 score: 31.76 coord: 100..117 score: 20.17 coord: 83..98 score: 41.15 coord: 119..130 score: 41.54
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 10..131
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 37..128 e-value: 9.8E-12 score: 55.0
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 37..118 e-value: 2.7E-5 score: 24.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 36..132 e-value: 3.1E-23 score: 84.0
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 37..131
None	No IPR available	PANTHER	PTHR33076:SF73	NON-SPECIFIC LIPID-TRANSFER PROTEIN	coord: 10..131
None	No IPR available	CDD	cd01960	nsLTP1	coord: 37..129 e-value: 1.62067E-26 score: 93.5685

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g04560.1	Moc05g04560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding