Moc05g03350 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g03350
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	histone deacetylase complex subunit SAP18
Location	chr5: 2332573 .. 2335237 (-)
RNA-Seq Expression	Moc05g03350
Synteny	Moc05g03350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGAGAAGCAGAAGCACCAAGGAGAGCTTATGGCGCTCCTCCGAGAGGCCCTCATGTTCCTCCTCGTCCTCGCTTGGAGCCCGTTGATCGCGAAAAGGTTTCTCTCTCTCCCCTATAATTTTAGGGTTGCTGTCCGTTCCGGCGCCGTATCAGATACATACATTTTTATTTGTTTTGGTGCTCATTAGCTTGTTATAGAATCCATCCTCATCTTCAATCGTTTCGTTGTTTCTTTGCTCTTAAATGTCGTAGAAATTGCAAATTTGTTTTGGGCTAATCATGTTAGGGTGTGCTTTTTCGTTACCTCGTAGTGTACGGAGATGGCTGTGTAAACATAGGTAGTAGCTTTCGATTTCTCTGCTGAATAACCGTGTTCCTCATTTTGCAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGGTACGTTGTATGAAATTTTGTTTGATTTCTTTGCACATCTGGAAGGAAGCGCGTTTTCAAATTTAGTATGTGATATCGCTTAAAGAACCATAGTTTAATCCAGGAGCTATATCAATAGGGATGGAGTGAAATGCGTTGGCCGCCGACTTAGTGGGAAATGTTCTTTTGTTTATGTCATTGTGATTGTGGTGATAAATAGGATTTAGGAATCGGATGAGAGGATAATTTTAGCAAATTTCTCTGGATTCTGTTGTATATTTAGGTTATCAGGCTAAATGGCTTGTCGATGATCTAGGCTCTCGATTATATACGATGCCCTTATTTGGAATCTTGGATTATGGAAGCATCATTCTCAGGGGCAAAGTGGAGCGACGATGGAAATAGAGGGGGAAATTGCCCTAGTTTCTTCATCTTAGATTAAAAAATTATATTAAAAAGTTAAAGATTTTAGGGGTTTGCTCTAATTTATGTCTCTAATTTTTTTTTTTTATTGAAAGTTTATATATACAAAAACTTGGAAGGTAAAACTTTACCCTCCATGTGAAATGGGTCCGTATGAAACTGACATTAGCTATTATTGCAAAATTTCTGCAGGTTGGGGGTCATCATTTCAATGAAGACTTCGCTGTGAGAGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAGCTAACTGATCTGGTTATATTTCCCATTCTTTTTCAACACTTTCTCCCTGCACGCACTGCATGACATAAATGATCAAACGATCTGTTTCTTTTTTTGACTTTATATCCATGGCTTCATATAATAGAAACTATTTCCCCTTCCATTGCCCTTGAACTTACATTGGGGTGTTACAGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCCAAACTATCTTTTGCTTTGGTGTATCCCGACAGACATGGCCGGTTTGTAGTGAGAGAGGTATCTCTTTCTCTATATGCATGTATACATATATTCGTGATTTCAGGATGGTATATTGGAAAGTATATTCATGATTCTTCGCCCTTTTACTTAGTTGAGTGTTCCAAAATCCAGCCAACAAAACACTCAAAATATGTCCATGACAATACTCGAAGTTCAACAAGAAAACACTGTTACAAATTCAAGCAACAAAGTCCTAACAACAGACCGCACAAGACCAGCCAAACAAATGCTTATAACAGTCACAAAAATCGGTACTCATGAAAATAATCTGTCCAACAATCAGAATGCCACAAATGTCAAGGAAAAAGAAAACGATTGAACTAATGGAGAGTATAATTAATTATTTATTCAAGTCTAGGAATCAATTCAATGAAATTAAACTTGTAAGGATAAATTTGACTCACCCAACTAAATAAATTAAAAGATCCCTATTGTCCGCCTGCATGTATATGACTTGATTGACGGGACAATAGTTCCAGACTGGACTTCTTGATAGTCTTTTAAGTAAGTTTAAGTCTGACGGTTTTTTTGAAAGATGAATAATCCTGCTTCTAGGATGTACTAACACGCTGAACTTGTGCTTACTGCTTACCTTGCATATTAAAGGAGACGACAACTTGGTGTACGATTACATACCAATCTCATGTTTGCTGGATAGAATTAATCTGACTCGAAATGTTTTGTAATGAATCATACTCTCGTTTGCAATTTCTTTTATCGCAGAGAATTGAAGGGCTTGAGTTTGTGATATATTTCATTTCTTGATACATTGCCCGCACTTATTGAGTTTGATTCTTTTTAAAAACTAATTTTCATGTATGAGTTAAGTTCTGAAGAAAGCGAACTACTAGGTTCTGAGTAATCCAGATTTTGTTTCTTCATGTGAAGGTTGGGAAGACATTCTCATTTGGAAATGGACGATTAGACGATAGCTTGGCCTTGGCTGAACTCGGTTTTCAGGTATAACAAACAGGGCTTTTGTTTTTTGTTTTTTTTTTTGCCATATCTAGGTGCTGAACTAGAAGTTTATTTTTCATGAAGAGTGGCCAAGTTTTATCTTTTTTTTTTTTTAAAAAAAAACTTTGATGTCACTCGAGTCACCCCAGTTGCTATTAAAAAAATAGGGTTAAGATAAATAAAACGTTTTAAGAGTTCAATTCATATACGAAATACGAACTCAAGAGGTATGTCGGTCCTGTATTTCTTCTGATGCTGTATTATTTTTTCCCGTTTTTGCTCAGATTGGAGATTACTTGGATGTGGCAATTTTATAG

mRNA sequence

ATGGCGGGAGAAGCAGAAGCACCAAGGAGAGCTTATGGCGCTCCTCCGAGAGGCCCTCATGTTCCTCCTCGTCCTCGCTTGGAGCCCGTTGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGGTTGGGGGTCATCATTTCAATGAAGACTTCGCTGTGAGAGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCCAAACTATCTTTTGCTTTGGTGTATCCCGACAGACATGGCCGGTTTGTAGTGAGAGAGGTTGGGAAGACATTCTCATTTGGAAATGGACGATTAGACGATAGCTTGGCCTTGGCTGAACTCGGTTTTCAGATTGGAGATTACTTGGATGTGGCAATTTTATAG

Coding sequence (CDS)

ATGGCGGGAGAAGCAGAAGCACCAAGGAGAGCTTATGGCGCTCCTCCGAGAGGCCCTCATGTTCCTCCTCGTCCTCGCTTGGAGCCCGTTGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGGTTGGGGGTCATCATTTCAATGAAGACTTCGCTGTGAGAGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCCAAACTATCTTTTGCTTTGGTGTATCCCGACAGACATGGCCGGTTTGTAGTGAGAGAGGTTGGGAAGACATTCTCATTTGGAAATGGACGATTAGACGATAGCTTGGCCTTGGCTGAACTCGGTTTTCAGATTGGAGATTACTTGGATGTGGCAATTTTATAG

Protein sequence

MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

Homology

[Close]

BLAST of Moc05g03350 vs. NCBI nr
Match: XP_022147400.1 (histone deacetylase complex subunit SAP18 [Momordica charantia])

HSP 1 Score: 303.5 bits (776), Expect = 9.8e-79
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120

Query: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 149
           FGNGRLDDSLALAELGFQIGDYLDVAIL
Sbjct: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 148

[Close]

BLAST of Moc05g03350 vs. NCBI nr
Match: XP_022943948.1 (histone deacetylase complex subunit SAP18-like [Cucurbita moschata] >KAG6597180.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028645.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS
Sbjct: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 143

Query: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 149
           FGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 144 FGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of Moc05g03350 vs. NCBI nr
Match: XP_023538738.1 (histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120

Query: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 149
           FGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 121 FGNGRSDDNLALAELGFQIGDYLDVAII 148

[Close]

BLAST of Moc05g03350 vs. NCBI nr
Match: XP_022974173.1 (histone deacetylase complex subunit SAP18-like [Cucurbita maxima])

HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS
Sbjct: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 143

Query: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 149
           FGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 144 FGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of Moc05g03350 vs. NCBI nr
Match: XP_038879427.1 (histone deacetylase complex subunit SAP18 [Benincasa hispida])

HSP 1 Score: 287.7 bits (735), Expect = 5.6e-74
Identity = 140/148 (94.59%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGA PR  H PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAFPRASHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFV+REVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120

Query: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 149
           FGNGRLDDSLALAELGFQIGDYLDVAI+
Sbjct: 121 FGNGRLDDSLALAELGFQIGDYLDVAII 148

[Close]

BLAST of Moc05g03350 vs. ExPASy Swiss-Prot
Match: O64644 (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2g45640 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-49
Identity = 104/150 (69.33%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 5   AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVR 64
           AEA RR  G      PPRG +  PPRP+ EPVDREKTCPLLLRVFTK GGHH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 65  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKT 124
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G + VREVG+T
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVGET 121

Query: 125 FSFGNGRL-DDSLALAELGFQIGDYLDVAI 148
            ++ N +  DDS  L+EL F+IGDYLDVAI
Sbjct: 122 MAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of Moc05g03350 vs. ExPASy Swiss-Prot
Match: Q3T022 (Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.7e-30
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 28  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVVREVGKTFSFGNGRLDDSLALAELGFQIGDYLDVA 147
           PEAR++    +FA+V+ D +   + V+E+G T S G    DDS+ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]

BLAST of Moc05g03350 vs. ExPASy Swiss-Prot
Match: O00422 (Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.7e-30
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 28  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVVREVGKTFSFGNGRLDDSLALAELGFQIGDYLDVA 147
           PEAR++    +FA+V+ D +   + V+E+G T S G    DDS+ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]

BLAST of Moc05g03350 vs. ExPASy Swiss-Prot
Match: Q5RDT5 (Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.7e-30
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 28  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVVREVGKTFSFGNGRLDDSLALAELGFQIGDYLDVA 147
           PEAR++    +FA+V+ D +   + V+E+G T S G    DDS+ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFTDVKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]

BLAST of Moc05g03350 vs. ExPASy Swiss-Prot
Match: O55128 (Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.8e-30
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 0


Query: 28  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVVREVGKTFSFGNGRLDDSLALAELGFQIGDYLDVA 147
           PEAR++    +FA+V+ D +   + V+E+G T S G    DDS+ L    FQIGDYLD+A
Sbjct: 78  PEARKKGTHFNFAIVFMDLKRPGYRVKEIGSTMS-GRKGTDDSMTLQSQKFQIGDYLDIA 137

[Close]

BLAST of Moc05g03350 vs. ExPASy TrEMBL
Match: A0A6J1D024 (histone deacetylase complex subunit SAP18 OS=Momordica charantia OX=3673 GN=LOC111016339 PE=3 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.8e-79
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120

Query: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 149
           FGNGRLDDSLALAELGFQIGDYLDVAIL
Sbjct: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 148

[Close]

BLAST of Moc05g03350 vs. ExPASy TrEMBL
Match: A0A6J1IFF7 (histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LOC111472759 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.4e-76
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS
Sbjct: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 143

Query: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 149
           FGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 144 FGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of Moc05g03350 vs. ExPASy TrEMBL
Match: A0A6J1FXI8 (histone deacetylase complex subunit SAP18-like OS=Cucurbita moschata OX=3662 GN=LOC111448519 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.4e-76
Identity = 141/148 (95.27%), Postives = 144/148 (97.30%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS
Sbjct: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 143

Query: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 149
           FGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 144 FGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of Moc05g03350 vs. ExPASy TrEMBL
Match: A0A5D3D2K7 (Histone deacetylase complex subunit SAP18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004240 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.5e-74
Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR  H PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFV+REVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120

Query: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 149
           FGN RLDDSLAL ELGFQIGDYLDVAI+
Sbjct: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]

BLAST of Moc05g03350 vs. ExPASy TrEMBL
Match: A0A1S3AVL4 (histone deacetylase complex subunit SAP18 OS=Cucumis melo OX=3656 GN=LOC103483322 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.5e-74
Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR  H PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKTFS 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFV+REVGKTFS
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREVGKTFS 120

Query: 121 FGNGRLDDSLALAELGFQIGDYLDVAIL 149
           FGN RLDDSLAL ELGFQIGDYLDVAI+
Sbjct: 121 FGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]

BLAST of Moc05g03350 vs. TAIR 10
Match: AT2G45640.1 (SIN3 associated polypeptide P18 )

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-50
Identity = 104/150 (69.33%), Postives = 120/150 (80.00%), Query Frame = 0


Query: 5   AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVR 64
           AEA RR  G      PPRG +  PPRP+ EPVDREKTCPLLLRVFTK GGHH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 65  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKT 124
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G + VREVG+T
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVREVGET 121

Query: 125 FSFGNGRL-DDSLALAELGFQIGDYLDVAI 148
            ++ N +  DDS  L+EL F+IGDYLDVAI
Sbjct: 122 MAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of Moc05g03350 vs. TAIR 10
Match: AT2G45640.2 (SIN3 associated polypeptide P18 )

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-47
Identity = 101/150 (67.33%), Postives = 117/150 (78.00%), Query Frame = 0


Query: 5   AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVR 64
           AEA RR  G      PPRG +  PPRP+ EPVDREKTCPLLLRVFTK GGHH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 65  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREVGKT 124
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G +    VG+T
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGY---NVGET 121

Query: 125 FSFGNGRL-DDSLALAELGFQIGDYLDVAI 148
            ++ N +  DDS  L+EL F+IGDYLDVAI
Sbjct: 122 MAYPNRKQPDDSKTLSELPFEIGDYLDVAI 148

The following BLAST results are available for this feature:

BLAST of Moc05g03350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147400.1	9.8e-79	100.00	histone deacetylase complex subunit SAP18 [Momordica charantia]	[more]
XP_022943948.1	1.7e-75	95.27	histone deacetylase complex subunit SAP18-like [Cucurbita moschata] >KAG6597180....	[more]
XP_023538738.1	1.7e-75	95.27	histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo]	[more]
XP_022974173.1	1.7e-75	95.27	histone deacetylase complex subunit SAP18-like [Cucurbita maxima]	[more]
XP_038879427.1	5.6e-74	94.59	histone deacetylase complex subunit SAP18 [Benincasa hispida]	[more]

BLAST of Moc05g03350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64644	2.2e-49	69.33	Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2...	[more]
Q3T022	6.7e-30	55.37	Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV...	[more]
O00422	6.7e-30	55.37	Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 ...	[more]
Q5RDT5	6.7e-30	55.37	Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 ...	[more]
O55128	8.8e-30	55.37	Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1...	[more]

BLAST of Moc05g03350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D024	4.8e-79	100.00	histone deacetylase complex subunit SAP18 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1IFF7	8.4e-76	95.27	histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FXI8	8.4e-76	95.27	histone deacetylase complex subunit SAP18-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3D2K7	3.5e-74	93.92	Histone deacetylase complex subunit SAP18 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3AVL4	3.5e-74	93.92	histone deacetylase complex subunit SAP18 OS=Cucumis melo OX=3656 GN=LOC10348332...	[more]

BLAST of Moc05g03350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45640.1	1.6e-50	69.33	SIN3 associated polypeptide P18	[more]
AT2G45640.2	1.6e-47	67.33	SIN3 associated polypeptide P18	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042534	Sin3 associated polypeptide p18 superfamily	GENE3D	3.10.20.550	ASAP complex, SAP18 subunit	coord: 22..148 e-value: 2.5E-45 score: 155.5
IPR010516	Sin3 associated polypeptide p18	PFAM	PF06487	SAP18	coord: 29..147 e-value: 4.6E-38 score: 130.6
IPR010516	Sin3 associated polypeptide p18	PANTHER	PTHR13082	SAP18	coord: 10..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR13082:SF4	DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATED	coord: 10..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g03350.1	Moc05g03350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003714	transcription corepressor activity