Moc05g03120 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g03120
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	LOB domain-containing protein
Location	chr5: 2152009 .. 2152881 (+)
RNA-Seq Expression	Moc05g03120
Synteny	Moc05g03120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCACGGGGCGCAGTGGAGGAAGTTGCACAGGCGGCAATGGGGGAGGCAGTGGACCTTGCGGTGCGTGTAAGTTTCTGCGGAGGAAGTGTCTGCCTGGGTGTATATTTGCACCCTACTTCGACTCCGAACAGGGCACGGCTCATTTTGCAGCGGTGCACAAGGTGTTCGGAGCCAGCAATGTATCGAAGCTGCTTTTACATATTCCAGAACACAAGCGGCTTGACGCTGCTATAACCATATGCTATGAAGCTCAAGCTCGGGTCAGAGAGCCAGTTCTTGGCTGTGTTGCTCATATCTTTGCTCTTCAAGAACAGGTAAAGCCAATTAGCTCATTACTTCACGAGTGTTATATCCACCTGAGAATTGATATCCATAGATCATCTTTATATCTTCATACGAGGAACAGAAACTTGTATATGTTATCTAGCTTTCTGTTTCAGTTTCATTTCTTGTATGTGTTAATTTTTCGGTAAATGTCGAAATCTGAGAGCTACACATTCTTTTAGGCAGCGAGGTTGCGAGCTGAGCTCTCATACTTACAAGCATACCTAGCAGCATCCGAGCTTCGAAGACCCCAATCCAATCTACAGGCACAGCCACCACCTCTGATTAAGCCATCTCTACCCTCAATTTCAAACCTGCCATTAGATTCCCCCTCCTTGCCCGTTTCATCGGATCTTTCCCTACTGCTCGATCCTGTGGTGCAAGCTTCAGGATCAAAACCGCAGTCTCCATTCGAATCATGTCAAATTGGAAGCAACAATTTCCCATCCATGGCCGGCAGGGATCAACGACTCATTTACAAACAACTGTCCTCAATGCAGTGTATTGGTGCCTCCTTATTTCCATACCTCCCAAAACGAGCCTAA

mRNA sequence

ATGAGCACGGGGCGCAGTGGAGGAAGTTGCACAGGCGGCAATGGGGGAGGCAGTGGACCTTGCGGTGCGTGTAAGTTTCTGCGGAGGAAGTGTCTGCCTGGGTGTATATTTGCACCCTACTTCGACTCCGAACAGGGCACGGCTCATTTTGCAGCGGTGCACAAGGTGTTCGGAGCCAGCAATGTATCGAAGCTGCTTTTACATATTCCAGAACACAAGCGGCTTGACGCTGCTATAACCATATGCTATGAAGCTCAAGCTCGGGTCAGAGAGCCAGTTCTTGGCTGTGTTGCTCATATCTTTGCTCTTCAAGAACAGGCAGCGAGGTTGCGAGCTGAGCTCTCATACTTACAAGCATACCTAGCAGCATCCGAGCTTCGAAGACCCCAATCCAATCTACAGGCACAGCCACCACCTCTGATTAAGCCATCTCTACCCTCAATTTCAAACCTGCCATTAGATTCCCCCTCCTTGCCCGTTTCATCGGATCTTTCCCTACTGCTCGATCCTGTGGTGCAAGCTTCAGGATCAAAACCGCAGTCTCCATTCGAATCATGTCAAATTGGAAGCAACAATTTCCCATCCATGGCCGGCAGGGATCAACGACTCATTTACAAACAACTGTCCTCAATGCAGTGTATTGGTGCCTCCTTATTTCCATACCTCCCAAAACGAGCCTAA

Coding sequence (CDS)

ATGAGCACGGGGCGCAGTGGAGGAAGTTGCACAGGCGGCAATGGGGGAGGCAGTGGACCTTGCGGTGCGTGTAAGTTTCTGCGGAGGAAGTGTCTGCCTGGGTGTATATTTGCACCCTACTTCGACTCCGAACAGGGCACGGCTCATTTTGCAGCGGTGCACAAGGTGTTCGGAGCCAGCAATGTATCGAAGCTGCTTTTACATATTCCAGAACACAAGCGGCTTGACGCTGCTATAACCATATGCTATGAAGCTCAAGCTCGGGTCAGAGAGCCAGTTCTTGGCTGTGTTGCTCATATCTTTGCTCTTCAAGAACAGGCAGCGAGGTTGCGAGCTGAGCTCTCATACTTACAAGCATACCTAGCAGCATCCGAGCTTCGAAGACCCCAATCCAATCTACAGGCACAGCCACCACCTCTGATTAAGCCATCTCTACCCTCAATTTCAAACCTGCCATTAGATTCCCCCTCCTTGCCCGTTTCATCGGATCTTTCCCTACTGCTCGATCCTGTGGTGCAAGCTTCAGGATCAAAACCGCAGTCTCCATTCGAATCATGTCAAATTGGAAGCAACAATTTCCCATCCATGGCCGGCAGGGATCAACGACTCATTTACAAACAACTGTCCTCAATGCAGTGTATTGGTGCCTCCTTATTTCCATACCTCCCAAAACGAGCCTAA

Protein sequence

MSTGRSGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAYLAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQASGSKPQSPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA

Homology

[Close]

BLAST of Moc05g03120 vs. NCBI nr
Match: XP_022147090.1 (LOB domain-containing protein 18-like [Momordica charantia])

HSP 1 Score: 442.2 bits (1136), Expect = 2.7e-120
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MSTGRSGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGAS 60
           MSTGRSGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGAS
Sbjct: 1   MSTGRSGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGAS 60

Query: 61  NVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAY 120
           NVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAY
Sbjct: 61  NVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAY 120

Query: 121 LAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQASGSKPQ 180
           LAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQASGSKPQ
Sbjct: 121 LAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQASGSKPQ 180

Query: 181 SPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 227
           SPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA
Sbjct: 181 SPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 226

[Close]

BLAST of Moc05g03120 vs. NCBI nr
Match: XP_022924343.1 (LOB domain-containing protein 18-like [Cucurbita moschata])

HSP 1 Score: 334.3 bits (856), Expect = 7.9e-88
Identity = 179/232 (77.16%), Postives = 193/232 (83.19%), Query Frame = 0


Query: 1   MSTGRSGGSCTGGNGGGS-----GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHK 60
           MS+   GG C  GNGG S     GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHK
Sbjct: 1   MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 60

Query: 61  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELS 120
           VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPV GCVAHIFALQ+QAARL+ ELS
Sbjct: 61  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELS 120

Query: 121 YLQAYLAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLP-VSSDLSLLLDPVVQA 180
           YLQAYLAASEL R   + QAQP  L+KP++PSI NLPLD PSLP  +SDLSLLLDPV QA
Sbjct: 121 YLQAYLAASELSRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQA 180

Query: 181 SGSKPQSPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 227
           S +K QSP E CQI SNNFPSM   DQ+++ KQLS+MQ IGASLFPY+PKRA
Sbjct: 181 SPAKLQSPLEFCQIRSNNFPSMGSIDQQIVQKQLSTMQRIGASLFPYVPKRA 232

[Close]

BLAST of Moc05g03120 vs. NCBI nr
Match: KAG7018947.1 (LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.3 bits (856), Expect = 7.9e-88
Identity = 179/232 (77.16%), Postives = 193/232 (83.19%), Query Frame = 0


Query: 1   MSTGRSGGSCTGGNGGGS-----GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHK 60
           MS+   GG C  GNGG S     GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHK
Sbjct: 97  MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 156

Query: 61  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELS 120
           VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPV GCVAHIFALQ+QAARL+ ELS
Sbjct: 157 VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELS 216

Query: 121 YLQAYLAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLP-VSSDLSLLLDPVVQA 180
           YLQAYLAASEL R   + QAQP  L+KP++PSI NLPLD PSLP  +SDLSLLLDPV QA
Sbjct: 217 YLQAYLAASELSRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQA 276

Query: 181 SGSKPQSPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 227
           S +K QSP E CQI SNNFPSM   DQ+++ KQLS+MQ IGASLFPY+PKRA
Sbjct: 277 SPAKLQSPLEFCQIRSNNFPSMGSIDQQIVQKQLSTMQRIGASLFPYVPKRA 328

[Close]

BLAST of Moc05g03120 vs. NCBI nr
Match: KAG6582565.1 (LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334.3 bits (856), Expect = 7.9e-88
Identity = 179/232 (77.16%), Postives = 193/232 (83.19%), Query Frame = 0


Query: 1   MSTGRSGGSCTGGNGGGS-----GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHK 60
           MS+   GG C  GNGG S     GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHK
Sbjct: 1   MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 60

Query: 61  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELS 120
           VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPV GCVAHIFALQ+QAARL+ ELS
Sbjct: 61  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELS 120

Query: 121 YLQAYLAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLP-VSSDLSLLLDPVVQA 180
           YLQAYLAASEL R   + QAQP  L+KP++PSI NLPLD PSLP  +SDLSLLLDPV QA
Sbjct: 121 YLQAYLAASELSRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQA 180

Query: 181 SGSKPQSPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 227
           S +K QSP E CQI SNNFPSM   DQ+++ KQLS+MQ IGASLFPY+PKRA
Sbjct: 181 SPAKLQSPLEFCQIRSNNFPSMGSIDQQIVQKQLSAMQRIGASLFPYVPKRA 232

[Close]

BLAST of Moc05g03120 vs. NCBI nr
Match: XP_008438149.1 (PREDICTED: LOB domain-containing protein 18 [Cucumis melo] >KAA0049032.1 LOB domain-containing protein 18 [Cucumis melo var. makuwa] >TYK17532.1 LOB domain-containing protein 18 [Cucumis melo var. makuwa])

HSP 1 Score: 333.2 bits (853), Expect = 1.8e-87
Identity = 179/231 (77.49%), Postives = 193/231 (83.55%), Query Frame = 0


Query: 1   MSTGRSGGSCTGGNGGGS----GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKV 60
           MS+ RS GSCT G GGGS    GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHKV
Sbjct: 1   MSSRRSSGSCTKGKGGGSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKV 60

Query: 61  FGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSY 120
           FGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQ+QAARL+ E+SY
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQAARLQIEISY 120

Query: 121 LQAYLAASELRRPQSNLQAQPPPLI-KPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQAS 180
           LQ YLA SEL RP  +LQAQPP L+ KP+L SI +LP D PS P  SDLSLLLDPV QAS
Sbjct: 121 LQGYLATSELPRPAPHLQAQPPALVKKPTLSSIVSLPSDCPSFPAESDLSLLLDPVEQAS 180

Query: 181 GSKPQSPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 227
             K QSP ES QIGSNNFPSM   DQ+++ KQLSSMQ IGASLFP +PKR+
Sbjct: 181 QEKLQSPLESYQIGSNNFPSMVSIDQQVVQKQLSSMQRIGASLFPNVPKRS 231

[Close]

BLAST of Moc05g03120 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 1.5e-52
Identity = 111/187 (59.36%), Postives = 134/187 (71.66%), Query Frame = 0


Query: 2   STGRSGGSCTGG---------NGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAA 61
           + G  GG C GG          GGG GPCGACKFLRRKC+PGCIFAPYFDSEQG+A+FAA
Sbjct: 10  AVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAA 69

Query: 62  VHKVFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRA 121
           VHKVFGASNVSKLLLHIP H+R DA +TICYEAQAR+R+P+ GCVAHIFALQ+Q   L+A
Sbjct: 70  VHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQA 129

Query: 122 ELSYLQAYLAASELRRPQSNLQAQPPP----LIKPSLPSISNLPLDSPSLPVSSDLSLLL 176
           E+SYLQA+LA+ EL +PQ+  Q  P P       P   +I++LP     LP + DL+ + 
Sbjct: 130 EVSYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDLASIF 189

[Close]

BLAST of Moc05g03120 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.3e-48
Identity = 107/179 (59.78%), Postives = 133/179 (74.30%), Query Frame = 0


Query: 6   SGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKL 65
           S G+ +  +GGG GPCGACKFLRRKC+ GCIFAPYFDSEQG AHFAAVHKVFGASNVSKL
Sbjct: 3   SSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKL 62

Query: 66  LLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAYLAASE 125
           L H+PEHKR DA ++IC+EAQAR+R+P+ GCV+HI +LQ+Q   L+ ELSYLQA+LA  E
Sbjct: 63  LHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLE 122

Query: 126 LRRPQSNLQAQPPPLIKPSLP--SISNLPLDSPSLPVSSDLSLLLDPVVQASGSKPQSP 183
           L +PQ     Q P     SL   SI++LP  SPS+    DLS + +PV+ ++ +  Q P
Sbjct: 123 LPQPQ---PPQVPVSSSGSLQALSITDLPTISPSV---YDLSSIFEPVMSSTWAMQQQP 175

[Close]

BLAST of Moc05g03120 vs. ExPASy Swiss-Prot
Match: O22132 (LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-42
Identity = 84/131 (64.12%), Postives = 102/131 (77.86%), Query Frame = 0


Query: 8   GSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLL 67
           G+  GG  GG GPCGACKFLRRKC+ GC+FAPYFD+EQGTA FAAVHKVFGASN SK+LL
Sbjct: 4   GNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLL 63

Query: 68  HIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAYLAASELR 127
            +P HKRLDA +T+CYEA AR+R+PV G V H+F+LQ Q   L+AEL+++QA L+  +  
Sbjct: 64  RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQRF 123

Query: 128 RPQSNLQAQPP 139
             QS  Q QPP
Sbjct: 124 PLQSPQQMQPP 134

[Close]

BLAST of Moc05g03120 vs. ExPASy Swiss-Prot
Match: O81322 (LOB domain-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=LBD31 PE=2 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 3.9e-37
Identity = 85/149 (57.05%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 11  TGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLLHIP 70
           +G   G  GPCGACKFLRRKC+  C+FAPYFDS +GT+HF AVHKVFGASN SKLL+ IP
Sbjct: 2   SGSTTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIP 61

Query: 71  EHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAYLAASELRRPQ 130
             +RLDA +T+ YEA AR+R+PV GCV HIFALQ Q   L+AEL+Y+Q  L         
Sbjct: 62  ASRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQL--------- 121

Query: 131 SNLQAQPPP----LIKPSLPSISNLPLDS 156
           S LQ  PPP      +    S SN+PL S
Sbjct: 122 STLQGLPPPNSQNNSRTEAASSSNVPLIS 141

[Close]

BLAST of Moc05g03120 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.3e-36
Identity = 73/107 (68.22%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 16  GGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLLHIPEHKRL 75
           G   PCGACKFLRRKC+ GC+FAPYF  EQG AHFAA+HKVFGASNVSKLL H+P   R 
Sbjct: 3   GFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRP 62

Query: 76  DAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAYLA 123
           +AA+TI YEAQAR+R+P+ GCVAHIFALQ+Q   L+A+L+ L+A  A
Sbjct: 63  EAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAA 109

[Close]

BLAST of Moc05g03120 vs. ExPASy TrEMBL
Match: A0A6J1CZ62 (LOB domain-containing protein 18-like OS=Momordica charantia OX=3673 GN=LOC111016112 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.3e-120
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MSTGRSGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGAS 60
           MSTGRSGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGAS
Sbjct: 1   MSTGRSGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGAS 60

Query: 61  NVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAY 120
           NVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAY
Sbjct: 61  NVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAY 120

Query: 121 LAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQASGSKPQ 180
           LAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQASGSKPQ
Sbjct: 121 LAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQASGSKPQ 180

Query: 181 SPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 227
           SPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA
Sbjct: 181 SPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 226

[Close]

BLAST of Moc05g03120 vs. ExPASy TrEMBL
Match: A0A6J1EC58 (LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111431863 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 3.8e-88
Identity = 179/232 (77.16%), Postives = 193/232 (83.19%), Query Frame = 0


Query: 1   MSTGRSGGSCTGGNGGGS-----GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHK 60
           MS+   GG C  GNGG S     GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHK
Sbjct: 1   MSSRHGGGGCKEGNGGSSSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHK 60

Query: 61  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELS 120
           VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPV GCVAHIFALQ+QAARL+ ELS
Sbjct: 61  VFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVFGCVAHIFALQQQAARLQVELS 120

Query: 121 YLQAYLAASELRRPQSNLQAQPPPLIKPSLPSISNLPLDSPSLP-VSSDLSLLLDPVVQA 180
           YLQAYLAASEL R   + QAQP  L+KP++PSI NLPLD PSLP  +SDLSLLLDPV QA
Sbjct: 121 YLQAYLAASELSRTAPHPQAQPQDLVKPTIPSIVNLPLDCPSLPSAASDLSLLLDPVEQA 180

Query: 181 SGSKPQSPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 227
           S +K QSP E CQI SNNFPSM   DQ+++ KQLS+MQ IGASLFPY+PKRA
Sbjct: 181 SPAKLQSPLEFCQIRSNNFPSMGSIDQQIVQKQLSTMQRIGASLFPYVPKRA 232

[Close]

BLAST of Moc05g03120 vs. ExPASy TrEMBL
Match: A0A5A7TZR4 (LOB domain-containing protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004010 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 8.6e-88
Identity = 179/231 (77.49%), Postives = 193/231 (83.55%), Query Frame = 0


Query: 1   MSTGRSGGSCTGGNGGGS----GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKV 60
           MS+ RS GSCT G GGGS    GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHKV
Sbjct: 1   MSSRRSSGSCTKGKGGGSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKV 60

Query: 61  FGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSY 120
           FGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQ+QAARL+ E+SY
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQAARLQIEISY 120

Query: 121 LQAYLAASELRRPQSNLQAQPPPLI-KPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQAS 180
           LQ YLA SEL RP  +LQAQPP L+ KP+L SI +LP D PS P  SDLSLLLDPV QAS
Sbjct: 121 LQGYLATSELPRPAPHLQAQPPALVKKPTLSSIVSLPSDCPSFPAESDLSLLLDPVEQAS 180

Query: 181 GSKPQSPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 227
             K QSP ES QIGSNNFPSM   DQ+++ KQLSSMQ IGASLFP +PKR+
Sbjct: 181 QEKLQSPLESYQIGSNNFPSMVSIDQQVVQKQLSSMQRIGASLFPNVPKRS 231

[Close]

BLAST of Moc05g03120 vs. ExPASy TrEMBL
Match: A0A1S3AVS3 (LOB domain-containing protein 18 OS=Cucumis melo OX=3656 GN=LOC103483345 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 8.6e-88
Identity = 179/231 (77.49%), Postives = 193/231 (83.55%), Query Frame = 0


Query: 1   MSTGRSGGSCTGGNGGGS----GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKV 60
           MS+ RS GSCT G GGGS    GPCGACKFLRRKC P CIFAPYFDSEQGT HFAAVHKV
Sbjct: 1   MSSRRSSGSCTKGKGGGSNGSGGPCGACKFLRRKCTPECIFAPYFDSEQGTTHFAAVHKV 60

Query: 61  FGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSY 120
           FGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQ+QAARL+ E+SY
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQQQAARLQIEISY 120

Query: 121 LQAYLAASELRRPQSNLQAQPPPLI-KPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQAS 180
           LQ YLA SEL RP  +LQAQPP L+ KP+L SI +LP D PS P  SDLSLLLDPV QAS
Sbjct: 121 LQGYLATSELPRPAPHLQAQPPALVKKPTLSSIVSLPSDCPSFPAESDLSLLLDPVEQAS 180

Query: 181 GSKPQSPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 227
             K QSP ES QIGSNNFPSM   DQ+++ KQLSSMQ IGASLFP +PKR+
Sbjct: 181 QEKLQSPLESYQIGSNNFPSMVSIDQQVVQKQLSSMQRIGASLFPNVPKRS 231

[Close]

BLAST of Moc05g03120 vs. ExPASy TrEMBL
Match: A0A0A0L4D4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126090 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.5e-87
Identity = 178/231 (77.06%), Postives = 194/231 (83.98%), Query Frame = 0


Query: 1   MSTGRSGGSCTGGNGGGS----GPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKV 60
           MS+ RSGGSCT G GGGS    GPCGACKFLRRKC+P CIFAPYFDSEQG+ HFAAVHKV
Sbjct: 1   MSSRRSGGSCTKGKGGGSNGSGGPCGACKFLRRKCMPECIFAPYFDSEQGSTHFAAVHKV 60

Query: 61  FGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSY 120
           FGASNVSK+LLHIPEHKRLDAAITICYEAQARVREPVLGCV+HIFALQ+QAARL+ E+SY
Sbjct: 61  FGASNVSKMLLHIPEHKRLDAAITICYEAQARVREPVLGCVSHIFALQQQAARLQIEISY 120

Query: 121 LQAYLAASELRRPQSNLQAQPPPLI-KPSLPSISNLPLDSPSLPVSSDLSLLLDPVVQAS 180
           LQAYLA SEL R   +LQAQPP L+ KP+L SI +LP D PS P  SDLSLLLDPV Q S
Sbjct: 121 LQAYLATSELPRSAPHLQAQPPALVKKPTLSSIISLPSDCPSFPAESDLSLLLDPVEQVS 180

Query: 181 GSKPQSPFESCQIGSNNFPSMAGRDQRLIYKQLSSMQCIGASLFPYLPKRA 227
             K QSP ES QIGSNNFPSM   DQ+++ KQLSSMQ IGASLFP +PKRA
Sbjct: 181 QEKLQSPLESYQIGSNNFPSMGSIDQQVVQKQLSSMQRIGASLFPNIPKRA 231

[Close]

BLAST of Moc05g03120 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 207.6 bits (527), Expect = 1.0e-53
Identity = 111/187 (59.36%), Postives = 134/187 (71.66%), Query Frame = 0


Query: 2   STGRSGGSCTGG---------NGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAA 61
           + G  GG C GG          GGG GPCGACKFLRRKC+PGCIFAPYFDSEQG+A+FAA
Sbjct: 10  AVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAA 69

Query: 62  VHKVFGASNVSKLLLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRA 121
           VHKVFGASNVSKLLLHIP H+R DA +TICYEAQAR+R+P+ GCVAHIFALQ+Q   L+A
Sbjct: 70  VHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQA 129

Query: 122 ELSYLQAYLAASELRRPQSNLQAQPPP----LIKPSLPSISNLPLDSPSLPVSSDLSLLL 176
           E+SYLQA+LA+ EL +PQ+  Q  P P       P   +I++LP     LP + DL+ + 
Sbjct: 130 EVSYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDLASIF 189

[Close]

BLAST of Moc05g03120 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 194.5 bits (493), Expect = 9.1e-50
Identity = 107/179 (59.78%), Postives = 133/179 (74.30%), Query Frame = 0


Query: 6   SGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKL 65
           S G+ +  +GGG GPCGACKFLRRKC+ GCIFAPYFDSEQG AHFAAVHKVFGASNVSKL
Sbjct: 3   SSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKL 62

Query: 66  LLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAYLAASE 125
           L H+PEHKR DA ++IC+EAQAR+R+P+ GCV+HI +LQ+Q   L+ ELSYLQA+LA  E
Sbjct: 63  LHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLE 122

Query: 126 LRRPQSNLQAQPPPLIKPSLP--SISNLPLDSPSLPVSSDLSLLLDPVVQASGSKPQSP 183
           L +PQ     Q P     SL   SI++LP  SPS+    DLS + +PV+ ++ +  Q P
Sbjct: 123 LPQPQ---PPQVPVSSSGSLQALSITDLPTISPSV---YDLSSIFEPVMSSTWAMQQQP 175

[Close]

BLAST of Moc05g03120 vs. TAIR 10
Match: AT2G45410.1 (LOB domain-containing protein 19 )

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-43
Identity = 84/131 (64.12%), Postives = 102/131 (77.86%), Query Frame = 0


Query: 8   GSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLL 67
           G+  GG  GG GPCGACKFLRRKC+ GC+FAPYFD+EQGTA FAAVHKVFGASN SK+LL
Sbjct: 4   GNLNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLL 63

Query: 68  HIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAYLAASELR 127
            +P HKRLDA +T+CYEA AR+R+PV G V H+F+LQ Q   L+AEL+++QA L+  +  
Sbjct: 64  RLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQRF 123

Query: 128 RPQSNLQAQPP 139
             QS  Q QPP
Sbjct: 124 PLQSPQQMQPP 134

[Close]

BLAST of Moc05g03120 vs. TAIR 10
Match: AT4G00210.1 (LOB domain-containing protein 31 )

HSP 1 Score: 156.4 bits (394), Expect = 2.8e-38
Identity = 85/149 (57.05%), Postives = 101/149 (67.79%), Query Frame = 0


Query: 11  TGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKLLLHIP 70
           +G   G  GPCGACKFLRRKC+  C+FAPYFDS +GT+HF AVHKVFGASN SKLL+ IP
Sbjct: 2   SGSTTGCGGPCGACKFLRRKCVADCVFAPYFDSVEGTSHFTAVHKVFGASNASKLLMMIP 61

Query: 71  EHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAYLAASELRRPQ 130
             +RLDA +T+ YEA AR+R+PV GCV HIFALQ Q   L+AEL+Y+Q  L         
Sbjct: 62  ASRRLDAVVTLTYEALARLRDPVYGCVGHIFALQHQVMNLQAELAYVQTQL--------- 121

Query: 131 SNLQAQPPP----LIKPSLPSISNLPLDS 156
           S LQ  PPP      +    S SN+PL S
Sbjct: 122 STLQGLPPPNSQNNSRTEAASSSNVPLIS 141

[Close]

BLAST of Moc05g03120 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 149.4 bits (376), Expect = 3.4e-36
Identity = 74/120 (61.67%), Postives = 91/120 (75.83%), Query Frame = 0


Query: 6   SGGSCTGGNGGGSGPCGACKFLRRKCLPGCIFAPYFDSEQGTAHFAAVHKVFGASNVSKL 65
           SG   T G G    PCGACKFLRRKC   CIFAPYF SEQG A FAA+HKVFGASNVSKL
Sbjct: 4   SGNGTTAGTG---SPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKL 63

Query: 66  LLHIPEHKRLDAAITICYEAQARVREPVLGCVAHIFALQEQAARLRAELSYLQAYLAASE 125
           LL++P H R +A +TI YEAQAR+ +PV GCV+HIFALQ+Q A L++++  ++A +A  +
Sbjct: 64  LLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQ 120

The following BLAST results are available for this feature:

BLAST of Moc05g03120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147090.1	2.7e-120	100.00	LOB domain-containing protein 18-like [Momordica charantia]	[more]
XP_022924343.1	7.9e-88	77.16	LOB domain-containing protein 18-like [Cucurbita moschata]	[more]
KAG7018947.1	7.9e-88	77.16	LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6582565.1	7.9e-88	77.16	LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_008438149.1	1.8e-87	77.49	PREDICTED: LOB domain-containing protein 18 [Cucumis melo] >KAA0049032.1 LOB dom...	[more]

BLAST of Moc05g03120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22131	1.5e-52	59.36	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
O81323	1.3e-48	59.78	LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S...	[more]
O22132	3.1e-42	64.12	LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 S...	[more]
O81322	3.9e-37	57.05	LOB domain-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=LBD31 PE=2 S...	[more]
Q5UG13	7.3e-36	68.22	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]

BLAST of Moc05g03120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CZ62	1.3e-120	100.00	LOB domain-containing protein 18-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1EC58	3.8e-88	77.16	LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111431...	[more]
A0A5A7TZR4	8.6e-88	77.49	LOB domain-containing protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3AVS3	8.6e-88	77.49	LOB domain-containing protein 18 OS=Cucumis melo OX=3656 GN=LOC103483345 PE=3 SV...	[more]
A0A0A0L4D4	1.5e-87	77.06	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G126090 PE=3 SV...	[more]

BLAST of Moc05g03120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45420.1	1.0e-53	59.36	LOB domain-containing protein 18	[more]
AT4G00220.1	9.1e-50	59.78	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G45410.1	2.2e-43	64.12	LOB domain-containing protein 19	[more]
AT4G00210.1	2.8e-38	57.05	LOB domain-containing protein 31	[more]
AT2G42430.1	3.4e-36	61.67	lateral organ boundaries-domain 16	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 20..118 e-value: 4.1E-36 score: 123.5
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 19..121 score: 22.724709
None	No IPR available	PANTHER	PTHR31529:SF4	LOB DOMAIN-CONTAINING PROTEIN 18	coord: 4..178
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 4..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g03120.1	Moc05g03120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus