Moc05g02260 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g02260
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	60S ribosomal protein L37a
Location	chr5: 1504335 .. 1506724 (-)
RNA-Seq Expression	Moc05g02260
Synteny	Moc05g02260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCGGTAACCATCCAGAACTAGTGGGATTCTGTTAGTTGGAGTAATCGGAATTTTTTTTTTTCTTTTTCTAAATTTAAATATTCTTTCTATTGAACGTTTGACATTTTTTTTTTCTTTTTGCTTTTTTTTTTCCCAATATATAACATATTGTGTTTAATATTAAAAAAAACTTAAATTTATTTGTCCCGTAAGTTTTATGGGTCCAATCATTTGGTTAATGTTTTTTTTTTAAATAAAAATAGAGTGACATGGCTTTCAACTCTTATAATTTGTACTTGTATTTGTATTATTATTGGCAGTCAATTGAAGAATAAAAAGATAATATTTTTATTTATATTTTGTAATAAATAAGTCAATATTGAGAATGTTAAAAAAAGAATGAAAAATAAGAAACACAAATAATTGTTAAAGGCTTAGATTTATCAATAAGATTGGAGACGATAACGTTGCCAAGATGGCTCGTAATTGAACTACAATTGTAAAATGTTGTCAATGTGCTTGATGTTTTAAAAATATGGTAGCTATAGGTTTAGTTTTATGAGTGGTAAAATGTGGAAATTGTGATTTATTCATCCTTGTAATGTAATAATTTTTTAAATCAATATAAAAACTAATCTGTAATGATTTTATTTGTTGTCTATAAAAAAAAAGAGATAAATTTAAAACATAATTAAAAAAGAAAAAAGTTTGTTTGCCTCCTAATTTTGATCAGTATGATGGGCCTAGACTCCAACTAAGCCTAACAAATAGAGATCAAGATGGGCTTTAAAGCCCAATTAGTACCAATTTTGGGCCGGAGGGCTTACGAGACGCACCTCGTAATTTGGTTGGCTATATAATCAGCCGGAGGATTTCTAGGGTTTTCCCGCTTGGCCGTTCAGTCTCTGCACCAGCGTTTCTTCAGGCGTGCTCGTTGCTGCTAATCCTCAACAATGGTGCTCTCTCTCTCACTCTCGCTTCTAGGGTTTCATGTTCTTATGTACCACGTTTTTGTTTCTGGATTTTTTGAGGATTCTTGGAAGTATTTTTTGAAGTTTTGAAGGCAAGAAGCGAGGCCTGTAATCTGTAGGATTAAATTAGTGTTGGGGAGGTTATATGAGAGACTGGAATGGGAAGAAAGATCGTACTGGATTATCGATCTGATTTCATGGATCTTAGGCAGCTAAAGAGTTGTTCAATACAGAAAAGTGAATAAGCACTATACGATTCTCTAGTTTTCGTTAATTTGCGATATTTTTACTACTGTTCTCTGTTTCCACACTCTTAAAGAGAGGAATCAGGATTGAAGAGATTTTTGAAGAATTTTGTTCTTTAGCGAGGCTCTACGTCTAATACTTTCTTTATATCCTATTTGTTTTGGATGGATTGATGTATTTTGCTAACTTTTATGCTATTTGTTTTACTGTATAATCGCAGACGAAGAGAACCAAGAAGGCTGGAATTGTCGGGAAATACGGTATGTTAACATTGACCGAAACAAAATTCGTACTCCCTATATGAGAGAAAACAAGTGAATCTGATGGTTTCTAAATAGAGAGCTTTCAATGAACACTACGCAGATGGTTTAATTGATCTTGATATAATGTTTTAAGTTTATTCAATTGGGTATTTCCTCTTTCGGTGCCTTCTTTACAGGTACCAGATATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGCGAGTTTTGTGGAAAGGTAATCTCTTAATCCAGCATACTCTTCATGGCTATTTAATGGTTAAGAAGCTTGACAACAAAGAGCTCCTACTCTGGATTAGATGTCGATCTCTATGGTAATGTCTAGGTTTCAGTTTTTTGGGGATATTGGTCAACTAATATTCCTTTAATAATCATGAAAATTAAGAAACTAGAGGAATTATTGGATTCACTTCATAGATAAAATATACATATTTACTATTCGTATACCCATTCATACTGGTGATATTTTTATCTCTGTTTCTTATAATTTTTTTAAGACATTTCTATGGTGTTTTGAAAAGTCGAAACCAGACAATTTATAGTAGTAATGTAATCACTAATCAGAACATATACATGATATAAAATTTATACCATGATTCTAATCAATGACTGCTGTATCAAATCCGTACCAGTATGCTGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAGCAGGAGGTGCCTACACTTTGAAGTGAGTACAGTTGATGCTTGTTTTCCTATCACGTGTCTGCATTTGATTCATGACCAAGGTTTTGATTCTGTTTCCTTTTTATGTTTTTGCTTTGGGCAGCACTGCAAGTGCCGTTACCGTTCGGAGCACGATCCGAAGGCTGAGGGAGCAGACTGAGAGCTAA

mRNA sequence

ATGCAGCGCCGGAGGATTTCTAGGGTTTTCCCGCTTGGCCGTTCAGTCTCTGCACCAGCGTTTCTTCAGGCGTGCTCGTTGCTGCTAATCCTCAACAATGGTGCTCTCTCTCTCACTCTCGCTTCTAGGACGAAGAGAACCAAGAAGGCTGGAATTGTCGGGAAATACGGTACCAGATATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGCGAGTTTTGTGGAAAGTATGCTGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAGCAGGAGGTGCCTACACTTTGAACACTGCAAGTGCCGTTACCGTTCGGAGCACGATCCGAAGGCTGAGGGAGCAGACTGAGAGCTAA

Coding sequence (CDS)

ATGCAGCGCCGGAGGATTTCTAGGGTTTTCCCGCTTGGCCGTTCAGTCTCTGCACCAGCGTTTCTTCAGGCGTGCTCGTTGCTGCTAATCCTCAACAATGGTGCTCTCTCTCTCACTCTCGCTTCTAGGACGAAGAGAACCAAGAAGGCTGGAATTGTCGGGAAATACGGTACCAGATATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGCGAGTTTTGTGGAAAGTATGCTGTGAAGAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAGCAGGAGGTGCCTACACTTTGAACACTGCAAGTGCCGTTACCGTTCGGAGCACGATCCGAAGGCTGAGGGAGCAGACTGAGAGCTAA

Protein sequence

MQRRRISRVFPLGRSVSAPAFLQACSLLLILNNGALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Homology

[Close]

BLAST of Moc05g02260 vs. NCBI nr
Match: XP_022974725.1 (uncharacterized protein LOC111473462 isoform X8 [Cucurbita maxima])

HSP 1 Score: 203.4 bits (516), Expect = 1.3e-48
Identity = 107/131 (81.68%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 4   RRISRVFPLGRSVSAPAFLQACSLLLILNNGALSLTLASRTKRTKKAGIVGKYGTRYGAS 63
           +R +R FPLGRSVSAPA LQ C              +++ TKRTKKAGIVGKYGTRYGAS
Sbjct: 246 QRKTRAFPLGRSVSAPASLQRC---------PCCSKVSTMTKRTKKAGIVGKYGTRYGAS 305

Query: 64  LRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS 123
           LRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS
Sbjct: 306 LRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS 365

Query: 124 TIRRLREQTES 135
           TIRRLREQTES
Sbjct: 366 TIRRLREQTES 367

[Close]

BLAST of Moc05g02260 vs. NCBI nr
Match: ONK59155.1 (uncharacterized protein A4U43_C08F3550 [Asparagus officinalis])

HSP 1 Score: 188.0 bits (476), Expect = 5.4e-44
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 36   LSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVG 95
            L + LAS TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKYAVKRKAVG
Sbjct: 1710 LEIGLASETKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHAKYFCEFCGKYAVKRKAVG 1769

Query: 96   IWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
            IWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 1770 IWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 1808

[Close]

BLAST of Moc05g02260 vs. NCBI nr
Match: KAG8484324.1 (hypothetical protein CXB51_023812 [Gossypium anomalum])

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43
Identity = 95/101 (94.06%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 34  GALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKA 93
           GA  L+ A+ TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKA
Sbjct: 537 GADLLSPATMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKA 596

Query: 94  VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 597 VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 637

[Close]

BLAST of Moc05g02260 vs. NCBI nr
Match: EXC26760.1 (hypothetical protein L484_023376 [Morus notabilis])

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-43
Identity = 93/96 (96.88%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 39  TLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWG 98
           TLA  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRK VGIWG
Sbjct: 549 TLAPMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKVVGIWG 608

Query: 99  CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 609 CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 644

[Close]

BLAST of Moc05g02260 vs. NCBI nr
Match: VVA26227.1 (PREDICTED: 60S ribosomal [Prunus dulcis])

HSP 1 Score: 185.7 bits (470), Expect = 2.7e-43
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 42  SRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKD 101
           S+TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKD
Sbjct: 6   SQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKD 65

Query: 102 CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 66  CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 98

[Close]

BLAST of Moc05g02260 vs. ExPASy Swiss-Prot
Match: Q9XHE4 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-44
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 44  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 103
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CG
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACG 61

Query: 104 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 62  KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of Moc05g02260 vs. ExPASy Swiss-Prot
Match: P0DKK1 (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-44
Identity = 88/91 (96.70%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 44  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 103
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCG
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCG 61

Query: 104 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           KVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 62  KVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of Moc05g02260 vs. ExPASy Swiss-Prot
Match: P0DKK2 (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-44
Identity = 88/91 (96.70%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 44  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 103
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCG
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCG 61

Query: 104 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           KVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 62  KVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of Moc05g02260 vs. ExPASy Swiss-Prot
Match: Q9ZRS8 (60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.3e-43
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 44  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 103
           TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDCG
Sbjct: 2   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCG 61

Query: 104 KVKAGGAYTLNTASAVTVRSTIRRLREQTE 134
           KVKAGGAYTLNT SAVTVRSTIRRLREQTE
Sbjct: 62  KVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91

[Close]

BLAST of Moc05g02260 vs. ExPASy Swiss-Prot
Match: Q9SRK6 (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.8e-43
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 44  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 103
           TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCG
Sbjct: 2   TKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCG 61

Query: 104 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           KVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 62  KVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of Moc05g02260 vs. ExPASy TrEMBL
Match: A0A6J1IEQ2 (uncharacterized protein LOC111473462 isoform X8 OS=Cucurbita maxima OX=3661 GN=LOC111473462 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.1e-49
Identity = 107/131 (81.68%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 4   RRISRVFPLGRSVSAPAFLQACSLLLILNNGALSLTLASRTKRTKKAGIVGKYGTRYGAS 63
           +R +R FPLGRSVSAPA LQ C              +++ TKRTKKAGIVGKYGTRYGAS
Sbjct: 246 QRKTRAFPLGRSVSAPASLQRC---------PCCSKVSTMTKRTKKAGIVGKYGTRYGAS 305

Query: 64  LRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS 123
           LRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS
Sbjct: 306 LRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRS 365

Query: 124 TIRRLREQTES 135
           TIRRLREQTES
Sbjct: 366 TIRRLREQTES 367

[Close]

BLAST of Moc05g02260 vs. ExPASy TrEMBL
Match: A0A3Q7HRS0 (MI domain-containing protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 5.9e-44
Identity = 97/109 (88.99%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 31   LNNGAL-----SLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCG 90
            L NG L      L+L + TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCG
Sbjct: 1680 LKNGTLFPLCIMLSLLNLTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCG 1739

Query: 91   KYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
            KYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 1740 KYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 1788

[Close]

BLAST of Moc05g02260 vs. ExPASy TrEMBL
Match: W9SDH6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023376 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43
Identity = 93/96 (96.88%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 39  TLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWG 98
           TLA  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRK VGIWG
Sbjct: 549 TLAPMTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKVVGIWG 608

Query: 99  CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 609 CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 644

[Close]

BLAST of Moc05g02260 vs. ExPASy TrEMBL
Match: A0A5E4FEE5 (PREDICTED: 60S ribosomal OS=Prunus dulcis OX=3755 GN=ALMOND_2B021043 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 42  SRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKD 101
           S+TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKD
Sbjct: 6   SQTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKD 65

Query: 102 CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 66  CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 98

[Close]

BLAST of Moc05g02260 vs. ExPASy TrEMBL
Match: A0A1U8HID4 (60S ribosomal protein L37a isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107886403 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.3e-43
Identity = 94/102 (92.16%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 33  NGALSLTLASRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRK 92
           N + S    +RTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRK
Sbjct: 14  NKSYSHHWGNRTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRK 73

Query: 93  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 74  AVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 115

[Close]

BLAST of Moc05g02260 vs. TAIR 10
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 176.0 bits (445), Expect = 2.0e-44
Identity = 86/91 (94.51%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 44  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 103
           TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCG
Sbjct: 2   TKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCG 61

Query: 104 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 135
           KVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 62  KVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of Moc05g02260 vs. TAIR 10
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 173.7 bits (439), Expect = 9.9e-44
Identity = 84/89 (94.38%), Postives = 86/89 (96.63%), Query Frame = 0


Query: 45  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 104
           KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGK
Sbjct: 3   KRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGK 62

Query: 105 VKAGGAYTLNTASAVTVRSTIRRLREQTE 134
           VKAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 63  VKAGGAYTMNTASAVTVRSTIRRLREQIE 91

The following BLAST results are available for this feature:

BLAST of Moc05g02260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974725.1	1.3e-48	81.68	uncharacterized protein LOC111473462 isoform X8 [Cucurbita maxima]	[more]
ONK59155.1	5.4e-44	94.95	uncharacterized protein A4U43_C08F3550 [Asparagus officinalis]	[more]
KAG8484324.1	1.2e-43	94.06	hypothetical protein CXB51_023812 [Gossypium anomalum]	[more]
EXC26760.1	2.1e-43	96.88	hypothetical protein L484_023376 [Morus notabilis]	[more]
VVA26227.1	2.7e-43	98.92	PREDICTED: 60S ribosomal [Prunus dulcis]	[more]

BLAST of Moc05g02260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XHE4	1.1e-44	98.90	60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1	[more]
P0DKK1	1.5e-44	96.70	60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g06...	[more]
P0DKK2	1.5e-44	96.70	60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g05...	[more]
Q9ZRS8	1.3e-43	96.67	60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1	[more]
Q9SRK6	2.8e-43	94.51	Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB...	[more]

BLAST of Moc05g02260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IEQ2	6.1e-49	81.68	uncharacterized protein LOC111473462 isoform X8 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A3Q7HRS0	5.9e-44	88.99	MI domain-containing protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
W9SDH6	1.0e-43	96.88	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023376 PE=3 SV=1	[more]
A0A5E4FEE5	1.3e-43	98.92	PREDICTED: 60S ribosomal OS=Prunus dulcis OX=3755 GN=ALMOND_2B021043 PE=3 SV=1	[more]
A0A1U8HID4	1.3e-43	92.16	60S ribosomal protein L37a isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107886...	[more]

BLAST of Moc05g02260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10950.1	2.0e-44	94.51	Zinc-binding ribosomal protein family protein	[more]
AT3G60245.1	9.9e-44	94.38	Zinc-binding ribosomal protein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011331	Ribosomal protein L37ae/L37e	GENE3D	2.20.25.30		coord: 43..134 e-value: 1.8E-43 score: 148.5
IPR002674	Ribosomal protein L37ae	PFAM	PF01780	Ribosomal_L37ae	coord: 46..130 e-value: 6.3E-39 score: 131.9
IPR002674	Ribosomal protein L37ae	TIGRFAM	TIGR00280	TIGR00280	coord: 45..133 e-value: 3.5E-33 score: 111.8
IPR002674	Ribosomal protein L37ae	HAMAP	MF_00327	Ribosomal_L37Ae	coord: 46..114 score: 19.305292
None	No IPR available	PANTHER	PTHR48132	ZGC:171772	coord: 38..134
None	No IPR available	PANTHER	PTHR48132:SF2	60S RIBOSOMAL PROTEIN L37A-2	coord: 38..134
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..25 score: 7.0
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 52..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g02260.1	Moc05g02260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome