Moc05g01940 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g01940
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	60S ribosomal protein L13a, putative
Location	chr5: 1257637 .. 1259521 (+)
RNA-Seq Expression	Moc05g01940
Synteny	Moc05g01940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTCTGGTTCTGGAATCTGCGCCAAGCGCGTCGTCGTCGACGCAAGGCACCACATGCTCGGGAGGCTGGCTTCGATCGTGGCCAAGGAGCTTCTCAATGGTCAGAAGGTAGTCATTGTCCGATGCGAAGAAATTTGCATCTCCGGAGGCTTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGTATGAACACCAAACCCTCCCATGGCCCCATTCACTTCCGCGCCCCTGCCAAGATCCTTTGGCGAACAATCCGTGGGTAATGTCTCTTCTTAGATTGGGAAGAAAATGCGTTTTCTCTCGTCTTCGTATTTCTTCAACGCCCTTCTGGAATCGATATCTATAGCAGTGATATAGTTGTGTTAAATTTATGCCATGGTATCGGGAATCATGTGTAGCTTAGCTTGTGGTTTCTTTGTTGTTTTCGAGTAATTTGTTTGATTTACACTATTATTTCTGTGCATTTACCTAGCTACTGCTGCTGAGATTGGGAAGAATTGTGTTTTGGATTGGTTTCATATTGCTCTTATAATTAGGTCTTGAACCAATAATGATAGTAGCAACATCAATGTGTTAAATTTTATTCTTTAATGTGTTGTAGTTTTTTTTTTTACGAGTGATCTGTTTATTCTACACTGCATTGCCTAAATGCGGAAATCAAGTTCATGGTTTACCATGTTATGCTGGAAAACTATTGGTTTATAATGCTCCTATAGTGAAGGAAACTAGTCCAGTTTTCTGCTTTGCTTCCAGATTAGGGTTTAGGGTTCACCTATGTATCTGTTTTTTTATCCCAGATGGGTATAGTCTATGTGGGTCAACAACTTATTTGGTTACTGTTTTTTTTTTCTTTAGAATGATCCCGCACAAGACTAAGCGTGGAGCTGCTGCTCTTGCTCGTTTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGACAAGATGAAGAGAATGGTCATTCCTGACGCTCTCAAGTGAGTTTTATGGCGAGATTGATCTTTTTTTACAAGATGTACATTATTTTGCCCCACTATATTATTAATTTGAATGTAAAATATTAGCTATGAGTTTGAATTTATGTTTAAAAAGTGAAAAACAAAACAAAACAAATCTAAGTAATAGGCCAAGTTTTTTTGACATGGAAAGCTGAAAACCAAATTATCATCAATCGGCTTATAGCCTTATAGAAATTTATACATATTTATGTTCTTCTGTATATTGAAACGTTATGTACCATGTGAAAATTAGGGTTTTGAGGCTTCAAGCTGGACACAAGTACTGCTTGTTGGGTAGACTCTCATCAGAAGTGGGATGGAACCACTATGACACTATCAAGGTACGCCATTGAAATTGCCTGAATAATGGTCTTATTCCCCCATTCCGCATGGTTTCTATTCATAAGCCTATTGCTATTTTTTCAAAGGCACCCACTCACTCAATGTTATTCAATCTCACCCATTTACGAATTTTCGTTTTTGGTTATTTATGATTCTCCTTTTTCTGGTGAAGTAGATAGATGATCCTTTTTGGTCAGCATTTATCCACAGTGAATTATGATTGTTTTGTTTTTGTTCCCTCAGGAGCTTGAAAGGAAGAGGAAGGAGAGGGCTCAAGCCGCATACGAGAAGAAGAAGCAGTTAACAAAGTTGAGGGTCAAAGCCGAGAAGGTTGCGGACGAGAAGCTCGGTCCCCAGTTGGAAGTAATAGCCCCAATTAAATACTAGTTTGTTTCGAGTTTGTTATGAACGAATGCTCTAATGTTATGGGAGAATCGAGTTGCAGGTGAATTTGCATTTCATTTTAGTACCGTTTTGTTGTCTATTGATGATGATGATGTTGGTCACCTTTTTTCTTCGGATTTTGAAATTAGTTAA

mRNA sequence

ATGGTGTCTGGTTCTGGAATCTGCGCCAAGCGCGTCGTCGTCGACGCAAGGCACCACATGCTCGGGAGGCTGGCTTCGATCGTGGCCAAGGAGCTTCTCAATGGTCAGAAGGTAGTCATTGTCCGATGCGAAGAAATTTGCATCTCCGGAGGCTTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGTATGAACACCAAACCCTCCCATGGCCCCATTCACTTCCGCGCCCCTGCCAAGATCCTTTGGCGAACAATCCGTGGAATGATCCCGCACAAGACTAAGCGTGGAGCTGCTGCTCTTGCTCGTTTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGACAAGATGAAGAGAATGGTCATTCCTGACGCTCTCAAGGTTTTGAGGCTTCAAGCTGGACACAAGTACTGCTTGTTGGGTAGACTCTCATCAGAAGTGGGATGGAACCACTATGACACTATCAAGGAGCTTGAAAGGAAGAGGAAGGAGAGGGCTCAAGCCGCATACGAGAAGAAGAAGCAGTTAACAAAGTTGAGGGTCAAAGCCGAGAAGGTTGCGGACGAGAAGCTCGGTGAATTTGCATTTCATTTTAGTACCGTTTTGTTGTCTATTGATGATGATGATGTTGGTCACCTTTTTTCTTCGGATTTTGAAATTAGTTAA

Coding sequence (CDS)

ATGGTGTCTGGTTCTGGAATCTGCGCCAAGCGCGTCGTCGTCGACGCAAGGCACCACATGCTCGGGAGGCTGGCTTCGATCGTGGCCAAGGAGCTTCTCAATGGTCAGAAGGTAGTCATTGTCCGATGCGAAGAAATTTGCATCTCCGGAGGCTTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGTATGAACACCAAACCCTCCCATGGCCCCATTCACTTCCGCGCCCCTGCCAAGATCCTTTGGCGAACAATCCGTGGAATGATCCCGCACAAGACTAAGCGTGGAGCTGCTGCTCTTGCTCGTTTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGACAAGATGAAGAGAATGGTCATTCCTGACGCTCTCAAGGTTTTGAGGCTTCAAGCTGGACACAAGTACTGCTTGTTGGGTAGACTCTCATCAGAAGTGGGATGGAACCACTATGACACTATCAAGGAGCTTGAAAGGAAGAGGAAGGAGAGGGCTCAAGCCGCATACGAGAAGAAGAAGCAGTTAACAAAGTTGAGGGTCAAAGCCGAGAAGGTTGCGGACGAGAAGCTCGGTGAATTTGCATTTCATTTTAGTACCGTTTTGTTGTCTATTGATGATGATGATGTTGGTCACCTTTTTTCTTCGGATTTTGAAATTAGTTAA

Protein sequence

MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLTKLRVKAEKVADEKLGEFAFHFSTVLLSIDDDDVGHLFSSDFEIS

Homology

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BLAST of Moc05g01940 vs. NCBI nr
Match: KAG6597292.1 (60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 393.3 bits (1009), Expect = 1.4e-105
Identity = 204/224 (91.07%), Postives = 208/224 (92.86%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA YEKKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLN 180

Query: 181 KLRVKAEKVADEKLGEFAFHFSTVLLSI---DDDDVGHLFSSDF 222
           KLRVKAEKVADEKLG        +LLSI   DDDDVGH FS  F
Sbjct: 181 KLRVKAEKVADEKLGPQLQR--AILLSIHDDDDDDVGHHFSYPF 222

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BLAST of Moc05g01940 vs. NCBI nr
Match: XP_022147118.1 (60S ribosomal protein L13a-4-like [Momordica charantia])

HSP 1 Score: 386.3 bits (991), Expect = 1.7e-103
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVADEKLG
Sbjct: 181 KLRVKAEKVADEKLG 195

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BLAST of Moc05g01940 vs. NCBI nr
Match: XP_022924796.1 (60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata] >XP_023529032.1 60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo] >KAG6582470.1 60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018859.1 60S ribosomal protein L13a-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.4 bits (986), Expect = 6.6e-103
Identity = 192/195 (98.46%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVV+DARHHMLGRLASIVAKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVADEKLG
Sbjct: 181 KLRVKAEKVADEKLG 195

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BLAST of Moc05g01940 vs. NCBI nr
Match: XP_022980414.1 (60S ribosomal protein L13a-4-like [Cucurbita maxima])

HSP 1 Score: 384.4 bits (986), Expect = 6.6e-103
Identity = 192/195 (98.46%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVV+DARHHMLGRLASIVAKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVADEKLG
Sbjct: 181 KLRVKAEKVADEKLG 195

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BLAST of Moc05g01940 vs. NCBI nr
Match: XP_004133995.1 (60S ribosomal protein L13a-2 [Cucumis sativus] >XP_008438365.1 PREDICTED: 60S ribosomal protein L13a-2-like [Cucumis melo] >KAA0049152.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa] >KGN56740.1 hypothetical protein Csa_009815 [Cucumis sativus] >TYK17407.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa])

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102
Identity = 191/195 (97.95%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVADEKLG
Sbjct: 181 KLRVKAEKVADEKLG 195

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BLAST of Moc05g01940 vs. ExPASy Swiss-Prot
Match: Q9LRX8 (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13AB PE=2 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 6.0e-99
Identity = 177/195 (90.77%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHM GRLASI+AKELLNGQ VV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLR KAEKVA+EKLG
Sbjct: 181 KLRAKAEKVAEEKLG 195

[Close]

BLAST of Moc05g01940 vs. ExPASy Swiss-Prot
Match: Q9FKC0 (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL13AD PE=2 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 6.0e-99
Identity = 179/195 (91.79%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVVIVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVA+EKLG
Sbjct: 181 KLRVKAEKVAEEKLG 195

[Close]

BLAST of Moc05g01940 vs. ExPASy Swiss-Prot
Match: Q9SFU1 (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13AA PE=2 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 5.1e-98
Identity = 174/195 (89.23%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLAS+VAK+LLNGQ +V+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180

Query: 181 KLRVKAEKVADEKLG 196
           KLR KAEKVA+EKLG
Sbjct: 181 KLRAKAEKVAEEKLG 195

[Close]

BLAST of Moc05g01940 vs. ExPASy Swiss-Prot
Match: Q9SVR0 (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13AC PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 9.6e-97
Identity = 172/195 (88.21%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EG+PPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 181 KLRVKAEKVADEKLG 196
           KLR KAEKVA+E+LG
Sbjct: 181 KLRTKAEKVAEERLG 195

[Close]

BLAST of Moc05g01940 vs. ExPASy Swiss-Prot
Match: O49885 (60S ribosomal protein L13a OS=Lupinus luteus OX=3873 GN=RPL13A PE=2 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 3.5e-91
Identity = 168/195 (86.15%), Postives = 181/195 (92.82%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGI AKRVVVDARHHMLGRLASIVAKELLNGQKVVIVR EEICISGGLVRQKMKY+
Sbjct: 1   MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG  ALARLK YEG+PPP+DK 
Sbjct: 61  RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIKELE+KRKER+Q  YE+KKQL 
Sbjct: 121 KRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLN 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAE+VA EKLG
Sbjct: 181 KLRVKAEQVAQEKLG 194

[Close]

BLAST of Moc05g01940 vs. ExPASy TrEMBL
Match: A0A6J1D0E7 (60S ribosomal protein L13a-4-like OS=Momordica charantia OX=3673 GN=LOC111016129 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.4e-104
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVADEKLG
Sbjct: 181 KLRVKAEKVADEKLG 195

[Close]

BLAST of Moc05g01940 vs. ExPASy TrEMBL
Match: A0A6J1IZ77 (60S ribosomal protein L13a-4-like OS=Cucurbita maxima OX=3661 GN=LOC111479788 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.2e-103
Identity = 192/195 (98.46%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVV+DARHHMLGRLASIVAKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVADEKLG
Sbjct: 181 KLRVKAEKVADEKLG 195

[Close]

BLAST of Moc05g01940 vs. ExPASy TrEMBL
Match: A0A6J1EAG0 (60S ribosomal protein L13a-4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432187 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.2e-103
Identity = 192/195 (98.46%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVV+DARHHMLGRLASIVAKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVADEKLG
Sbjct: 181 KLRVKAEKVADEKLG 195

[Close]

BLAST of Moc05g01940 vs. ExPASy TrEMBL
Match: A0A5A7U034 (60S ribosomal protein L13a-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002690 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.1e-103
Identity = 191/195 (97.95%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVADEKLG
Sbjct: 181 KLRVKAEKVADEKLG 195

[Close]

BLAST of Moc05g01940 vs. ExPASy TrEMBL
Match: A0A0A0L439 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131930 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 7.1e-103
Identity = 191/195 (97.95%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVADEKLG
Sbjct: 181 KLRVKAEKVADEKLG 195

[Close]

BLAST of Moc05g01940 vs. TAIR 10
Match: AT3G24830.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 361.7 bits (927), Expect = 4.3e-100
Identity = 177/195 (90.77%), Postives = 188/195 (96.41%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHM GRLASI+AKELLNGQ VV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 181 KLRVKAEKVADEKLG 196
           KLR KAEKVA+EKLG
Sbjct: 181 KLRAKAEKVAEEKLG 195

[Close]

BLAST of Moc05g01940 vs. TAIR 10
Match: AT5G48760.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 361.7 bits (927), Expect = 4.3e-100
Identity = 179/195 (91.79%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVVIVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVA+EKLG
Sbjct: 181 KLRVKAEKVAEEKLG 195

[Close]

BLAST of Moc05g01940 vs. TAIR 10
Match: AT5G48760.2 (Ribosomal protein L13 family protein )

HSP 1 Score: 361.7 bits (927), Expect = 4.3e-100
Identity = 179/195 (91.79%), Postives = 186/195 (95.38%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVVIVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLRVKAEKVADEKLG 196
           KLRVKAEKVA+EKLG
Sbjct: 181 KLRVKAEKVAEEKLG 195

[Close]

BLAST of Moc05g01940 vs. TAIR 10
Match: AT3G07110.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 358.6 bits (919), Expect = 3.6e-99
Identity = 174/195 (89.23%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLAS+VAK+LLNGQ +V+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180

Query: 181 KLRVKAEKVADEKLG 196
           KLR KAEKVA+EKLG
Sbjct: 181 KLRAKAEKVAEEKLG 195

[Close]

BLAST of Moc05g01940 vs. TAIR 10
Match: AT4G13170.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 354.4 bits (908), Expect = 6.8e-98
Identity = 172/195 (88.21%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EG+PPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 181 KLRVKAEKVADEKLG 196
           KLR KAEKVA+E+LG
Sbjct: 181 KLRTKAEKVAEERLG 195

The following BLAST results are available for this feature:

BLAST of Moc05g01940 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597292.1	1.4e-105	91.07	60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022147118.1	1.7e-103	100.00	60S ribosomal protein L13a-4-like [Momordica charantia]	[more]
XP_022924796.1	6.6e-103	98.46	60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata] >XP_023529032....	[more]
XP_022980414.1	6.6e-103	98.46	60S ribosomal protein L13a-4-like [Cucurbita maxima]	[more]
XP_004133995.1	1.5e-102	97.95	60S ribosomal protein L13a-2 [Cucumis sativus] >XP_008438365.1 PREDICTED: 60S ri...	[more]

BLAST of Moc05g01940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRX8	6.0e-99	90.77	60S ribosomal protein L13a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13AB PE=2 SV=...	[more]
Q9FKC0	6.0e-99	91.79	60S ribosomal protein L13a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL13AD PE=2 SV=...	[more]
Q9SFU1	5.1e-98	89.23	60S ribosomal protein L13a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13AA PE=2 SV=...	[more]
Q9SVR0	9.6e-97	88.21	60S ribosomal protein L13a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13AC PE=2 SV=...	[more]
O49885	3.5e-91	86.15	60S ribosomal protein L13a OS=Lupinus luteus OX=3873 GN=RPL13A PE=2 SV=1	[more]

BLAST of Moc05g01940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D0E7	8.4e-104	100.00	60S ribosomal protein L13a-4-like OS=Momordica charantia OX=3673 GN=LOC111016129...	[more]
A0A6J1IZ77	3.2e-103	98.46	60S ribosomal protein L13a-4-like OS=Cucurbita maxima OX=3661 GN=LOC111479788 PE...	[more]
A0A6J1EAG0	3.2e-103	98.46	60S ribosomal protein L13a-4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A5A7U034	7.1e-103	97.95	60S ribosomal protein L13a-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L439	7.1e-103	97.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131930 PE=3 SV=1	[more]

BLAST of Moc05g01940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24830.1	4.3e-100	90.77	Ribosomal protein L13 family protein	[more]
AT5G48760.1	4.3e-100	91.79	Ribosomal protein L13 family protein	[more]
AT5G48760.2	4.3e-100	91.79	Ribosomal protein L13 family protein	[more]
AT3G07110.1	3.6e-99	89.23	Ribosomal protein L13 family protein	[more]
AT4G13170.1	6.8e-98	88.21	Ribosomal protein L13 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..179
None	No IPR available	GENE3D	6.10.250.3250		coord: 156..204 e-value: 7.1E-13 score: 50.4
None	No IPR available	PANTHER	PTHR11545:SF18	60S RIBOSOMAL PROTEIN L13A-4	coord: 1..196
IPR036899	Ribosomal protein L13 superfamily	GENE3D	3.90.1180.10	Ribosomal protein L13	coord: 8..154 e-value: 2.8E-61 score: 207.7
IPR036899	Ribosomal protein L13 superfamily	SUPERFAMILY	52161	Ribosomal protein L13	coord: 12..154
IPR005755	Ribosomal protein L13, eukaryotic/archaeal	TIGRFAM	TIGR01077	TIGR01077	coord: 12..153 e-value: 2.6E-53 score: 178.2
IPR005822	Ribosomal protein L13	PFAM	PF00572	Ribosomal_L13	coord: 10..115 e-value: 7.9E-27 score: 93.7
IPR005822	Ribosomal protein L13	PANTHER	PTHR11545	RIBOSOMAL PROTEIN L13	coord: 1..196
IPR005822	Ribosomal protein L13	HAMAP	MF_01366	Ribosomal_L13	coord: 11..135 score: 19.397787
IPR005822	Ribosomal protein L13	CDD	cd00392	Ribosomal_L13	coord: 12..113 e-value: 1.94662E-41 score: 134.94
IPR023563	Ribosomal protein L13, conserved site	PROSITE	PS00783	RIBOSOMAL_L13	coord: 89..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g01940.1	Moc05g01940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome