Moc05g01210 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g01210
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Arp2/3 complex 34 kDa subunit
Location	chr5: 786072 .. 788929 (+)
RNA-Seq Expression	Moc05g01210
Synteny	Moc05g01210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTCTTTCAGAGAGCTTCACCAGCTTTGAAGGAAATCCTCCTCAAACTGTGCAGGTGAGAATCTATTTCATGTGTTTGAATATTTTAACAGATAATTTTGTGTTTGATTAAAACTTGGAGAGAATTTTAGATATTAAATTTGCATATGATTGTGCTGGAAAATAGCTATTTTGAAGGTTTCTTTTTTTCGGTTATGAGCACAGTTTGGAAAAGCCCACAGAAATTGAGCATCACTTGCATGAATTTGGTTCTGTTCAATACCTTATCCAGGTAGAATAAATCTCATTCATCTGGGATTGTGCACGTTTAACATTTGAAATAATGTCTTGATGGCTTTCTGTTGTTTGGCAGTTCTCAGTATCGGATCCACAGAATATTTACCTGTCGATTTCAACCCCATTGTTGTCACAAGGAGCTCTGTTGTCTGATGGGCTCTCATCGCACACTGTCGAGATGGTAAAACAAATTTGCTCTCATGTTGTTGAGATCGTTGAACCTGCAAGAGAAGGATACCAACTTACTCTAAAAATCGATTTTGCACAAATTTTGCATGGGAAAGGTATGATTATCCACTTTTAGTTTTCACACTTGAACAGCTTCATTAATTGAAAATTAATTGACGAAAAGAATGAGAGGTGTTGATACTGCATAGTTTCAGAAAACAAATCATTTTGCTACTTGACATTCTGTAGAAGGTTGAGTTTAGGCCCATACTCATCCTGTTGTTGAGCAAGAATCTTGATGATTATAGTATAAGATTGAAATATGGGCTTTTCTTTATAACTTCAACTGATGTGGATGTTCTTTTTGCAGAGTCGGAAAAGATAATTACAGAGATTGCTGCTGTCCAAGCAGTGATTCTAAGTTCTCAGCTGAAAGAAATGTTGAGAAATGTTAATTCACAGGCTCTATTCCATGAAACATGCAGACCCATCAAACTTGTATATCATCCAAGGGAACCATTCTTTGTTATCAAGCAGGCAAGTTGAGAATGTATATTATTTTATTTCATAATCAGAACTCTAAAGTTGAGTTTATATTAACTAAGGTTTCCAGTGGGTTTATTTTGTCTCGCTCTAATGTGCCAATTCATTATAAACCCCTTCCTATATAAACAGATGAATGTTGAGTGACAGATAAGAACTGAGAAATTTGGTTGGGTTGTTCCAAATTTTGAGGAGCGAGACTTCTGACATTTAAGTTCTACTCTTGACTCTTCTGTGCATTTTGACATCTCTAAATAGACGAAAATCTTGCATACAGGCCCAGAAGATTCTCGTAATTTTCCCAATCCGTTTCAAGGAAAGTACAGATGTGATCATTGCAACAGCCTTTTTCCGGGTATGTTGCTTAAATAGCAATGCAAGGATCTGTTCTTATTTTTTAAAAAACTATATGAATTTATTTGGATAATGCAACTATTGTAGTCAAAATAGGAACTTATGGATGTGGGAAGCTCCGAAAAATGGGCAAAAGCACCTCCCTGCTGTTGGTCACCCATACCCCCGCCAGAACTGAGAGGCGAACCTTTGGAAGAACTGAGCACCAATGGAGGATTTGTCACCTTCGGTAAGATATCCATTTCAGCAAATGTAGTCTAGAAAAACGTTAATTTCTTGAGAGTATTCTTTCATGTATATGTTTATGTATGCGTTACATACAAAGTAAAAGAATGGAATCCAACACCAGCTGTATTAAACAGATTTCTCATAGTAACAACGGAAACGGAATTTATTCAACTTGTTGGATTTGTATTAGTAAGTTAGAAATTTTTTAATACTCTCAAACTCTGTTCACATAATGCATCGACAGATATTTCTCTGCGTCACGTTGAAGGTAAAAGACTTGACAAAACTGTATGGAGTTTGCTGAACTTTAATGCATATGTGAAGTACCATGTAAAGGTATCATGTTTGTTTATTCTTTTTATCCAAAACCTCTGTATCTGTTGTGGACAAATGTTTCCCCTATTCTTCTGGGAATAACTTTAAGCGTGTCTTTGGTGAACTTTCCTCACAGACAACCAGAGGTTTTATCCAGAGAAGGATGAGAAAGCGGTTAGAAGGGCTTGTTGAGGTAAGTTTTAAGTATACAAATATTTGTAAAATCAAAAGGCAATTTATCAGTGATATTTGGAAGAAGAGATTTCTCTAAAATTAAAAAATAAATGTTGTTTCCCATAACAAATGTCACTATGCTATTTGATTAATTTTGTTTTCCCAAACTTGTAGATCCTATATCAGAAAGGTTCAGATAATGTCCTACTCAACAAGGGTCAAGGTATGCTCTTAACAAATATAATAATAATGTGAATTACCATTGCCTTCTCATAATTTTCTCTCTCGTTTTTTGCATCTGGATGAGTTTCAACTTGATCTTGAGTTGCTGGGTGAGAAACAAACAATGTAAAACCAACCATTATAACATGCAGAGAGATCTCTTAATACCCTGAGTGTGGGTGAAAATGAAAAACAAAAAACGGGCCAAATTGATGTCGATCGATCGGAAGGTGTGCATAGTCTAATGTAGCTACCTTCGTGTTGGAGTCGAATCTCTATTCTAATCAACTCCGACCGAATTTTACTCTAACTCTAATGTTGAGTGAGTTTTAAGTTTGGTGATCAAACCAACAATTTATCTCTCATAGCTTAATTCCGTGCAGATGCAGGCATTATATATATGAAGAAACTGGTAGCCAAAACTAAACACCTCAAACAGAAATGTCGTAATTTGAGCAAGAAGATCAAGAGATTCCGATTTCGAATTAAAATCCCTGGATTTGCACGGTTTCGTCGAAGATGGTTGAAGTTCCCCAAGTTTTCTTCTTCAATTGGATACACCAGACTAAAATGA

mRNA sequence

ATGGCATTCTTTCAGAGAGCTTCACCAGCTTTGAAGGAAATCCTCCTCAAACTGTGCAGTTTGGAAAAGCCCACAGAAATTGAGCATCACTTGCATGAATTTGGTTCTGTTCAATACCTTATCCAGTTCTCAGTATCGGATCCACAGAATATTTACCTGTCGATTTCAACCCCATTGTTGTCACAAGGAGCTCTGTTGTCTGATGGGCTCTCATCGCACACTGTCGAGATGGTAAAACAAATTTGCTCTCATGTTGTTGAGATCGTTGAACCTGCAAGAGAAGGATACCAACTTACTCTAAAAATCGATTTTGCACAAATTTTGCATGGGAAAGAGTCGGAAAAGATAATTACAGAGATTGCTGCTGTCCAAGCAGTGATTCTAAGTTCTCAGCTGAAAGAAATGTTGAGAAATGTTAATTCACAGGCTCTATTCCATGAAACATGCAGACCCATCAAACTTGTATATCATCCAAGGGAACCATTCTTTGTTATCAAGCAGGCCCAGAAGATTCTCGTAATTTTCCCAATCCGTTTCAAGGAAAGTACAGATGTGATCATTGCAACAGCCTTTTTCCGGGAACTTATGGATGTGGGAAGCTCCGAAAAATGGGCAAAAGCACCTCCCTGCTGTTGGTCACCCATACCCCCGCCAGAACTGAGAGGCGAACCTTTGGAAGAACTGAGCACCAATGGAGGATTTGTCACCTTCGATATTTCTCTGCGTCACGTTGAAGGTAAAAGACTTGACAAAACTGTATGGAGTTTGCTGAACTTTAATGCATATGTGAAGTACCATGTAAAGACAACCAGAGGTTTTATCCAGAGAAGGATGAGAAAGCGGTTAGAAGGGCTTGTTGAGATCCTATATCAGAAAGGTTCAGATAATGTCCTACTCAACAAGGGTCAAGATGCAGGCATTATATATATGAAGAAACTGGTAGCCAAAACTAAACACCTCAAACAGAAATGTCGTAATTTGAGCAAGAAGATCAAGAGATTCCGATTTCGAATTAAAATCCCTGGATTTGCACGGTTTCGTCGAAGATGGTTGAAGTTCCCCAAGTTTTCTTCTTCAATTGGATACACCAGACTAAAATGA

Coding sequence (CDS)

ATGGCATTCTTTCAGAGAGCTTCACCAGCTTTGAAGGAAATCCTCCTCAAACTGTGCAGTTTGGAAAAGCCCACAGAAATTGAGCATCACTTGCATGAATTTGGTTCTGTTCAATACCTTATCCAGTTCTCAGTATCGGATCCACAGAATATTTACCTGTCGATTTCAACCCCATTGTTGTCACAAGGAGCTCTGTTGTCTGATGGGCTCTCATCGCACACTGTCGAGATGGTAAAACAAATTTGCTCTCATGTTGTTGAGATCGTTGAACCTGCAAGAGAAGGATACCAACTTACTCTAAAAATCGATTTTGCACAAATTTTGCATGGGAAAGAGTCGGAAAAGATAATTACAGAGATTGCTGCTGTCCAAGCAGTGATTCTAAGTTCTCAGCTGAAAGAAATGTTGAGAAATGTTAATTCACAGGCTCTATTCCATGAAACATGCAGACCCATCAAACTTGTATATCATCCAAGGGAACCATTCTTTGTTATCAAGCAGGCCCAGAAGATTCTCGTAATTTTCCCAATCCGTTTCAAGGAAAGTACAGATGTGATCATTGCAACAGCCTTTTTCCGGGAACTTATGGATGTGGGAAGCTCCGAAAAATGGGCAAAAGCACCTCCCTGCTGTTGGTCACCCATACCCCCGCCAGAACTGAGAGGCGAACCTTTGGAAGAACTGAGCACCAATGGAGGATTTGTCACCTTCGATATTTCTCTGCGTCACGTTGAAGGTAAAAGACTTGACAAAACTGTATGGAGTTTGCTGAACTTTAATGCATATGTGAAGTACCATGTAAAGACAACCAGAGGTTTTATCCAGAGAAGGATGAGAAAGCGGTTAGAAGGGCTTGTTGAGATCCTATATCAGAAAGGTTCAGATAATGTCCTACTCAACAAGGGTCAAGATGCAGGCATTATATATATGAAGAAACTGGTAGCCAAAACTAAACACCTCAAACAGAAATGTCGTAATTTGAGCAAGAAGATCAAGAGATTCCGATTTCGAATTAAAATCCCTGGATTTGCACGGTTTCGTCGAAGATGGTTGAAGTTCCCCAAGTTTTCTTCTTCAATTGGATACACCAGACTAAAATGA

Protein sequence

MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLNKGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK

Homology

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BLAST of Moc05g01210 vs. NCBI nr
Match: XP_022154858.1 (actin-related protein 2/3 complex subunit 2B isoform X3 [Momordica charantia])

HSP 1 Score: 723.0 bits (1865), Expect = 1.3e-204
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0


Query: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60
           MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL
Sbjct: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60

Query: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120
           SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI
Sbjct: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120

Query: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFK 180
           AAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFK
Sbjct: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFK 180

Query: 181 ESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240
           ESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS
Sbjct: 181 ESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 LRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLN 300
           LRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLN
Sbjct: 241 LRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLN 300

Query: 301 KGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSSI 360
           KGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSSI
Sbjct: 301 KGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSSI 360

Query: 361 GYTRLK 367
           GYTRLK
Sbjct: 361 GYTRLK 366

[Close]

BLAST of Moc05g01210 vs. NCBI nr
Match: XP_022154845.1 (actin-related protein 2/3 complex subunit 2B isoform X1 [Momordica charantia])

HSP 1 Score: 644.4 bits (1661), Expect = 5.8e-181
Identity = 326/332 (98.19%), Postives = 328/332 (98.80%), Query Frame = 0


Query: 35  GSVQYLIQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE 94
           G+    +QFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE
Sbjct: 71  GNPPQTVQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE 130

Query: 95  GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL 154
           GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL
Sbjct: 131 GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL 190

Query: 155 VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP 214
           VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP
Sbjct: 191 VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP 250

Query: 215 IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI 274
           IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI
Sbjct: 251 IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI 310

Query: 275 QRRMRKRLEGLVEILYQKGSDNVLLNKGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRF 334
           QRRMRKRLEGLVEILYQKGSDNVLLNKGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRF
Sbjct: 311 QRRMRKRLEGLVEILYQKGSDNVLLNKGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRF 370

Query: 335 RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK 367
           RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK
Sbjct: 371 RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK 402

[Close]

BLAST of Moc05g01210 vs. NCBI nr
Match: XP_022154850.1 (actin-related protein 2/3 complex subunit 2B isoform X2 [Momordica charantia])

HSP 1 Score: 635.2 bits (1637), Expect = 3.5e-178
Identity = 324/332 (97.59%), Postives = 326/332 (98.19%), Query Frame = 0


Query: 35  GSVQYLIQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE 94
           G+    +QFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE
Sbjct: 71  GNPPQTVQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE 130

Query: 95  GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL 154
           GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL
Sbjct: 131 GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL 190

Query: 155 VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP 214
           VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP
Sbjct: 191 VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP 250

Query: 215 IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI 274
           IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI
Sbjct: 251 IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI 310

Query: 275 QRRMRKRLEGLVEILYQKGSDNVLLNKGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRF 334
           QRRMRKRLEGLVEILYQKGSDNVLLNKGQ  GIIYMKKLVAKTKHLKQKCRNLSKKIKRF
Sbjct: 311 QRRMRKRLEGLVEILYQKGSDNVLLNKGQ--GIIYMKKLVAKTKHLKQKCRNLSKKIKRF 370

Query: 335 RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK 367
           RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK
Sbjct: 371 RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK 400

[Close]

BLAST of Moc05g01210 vs. NCBI nr
Match: XP_004134045.2 (actin-related protein 2/3 complex subunit 2B [Cucumis sativus] >KGN56823.1 hypothetical protein Csa_011299 [Cucumis sativus])

HSP 1 Score: 615.1 bits (1585), Expect = 3.8e-172
Identity = 311/366 (84.97%), Postives = 338/366 (92.35%), Query Frame = 0


Query: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60
           MA FQRASPALKEILLKL SLEKPTEIEHHLHE+GSVQY IQ SV DPQ+IYLSI+TPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60

Query: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120
           SQG LLSDGLS +TVEMVKQICSH +EI+EPA+EGY+LTL+I+ A+ILHG+ESEKIIT+I
Sbjct: 61  SQGDLLSDGLSPYTVEMVKQICSHAIEIIEPAKEGYELTLRINSAKILHGEESEKIITDI 120

Query: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFK 180
           AAVQAVI+SS+LKE+LRNVNS  LF    RPIKLVYHPREPFFV+KQ QKIL+I+PIRFK
Sbjct: 121 AAVQAVIISSRLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQPQKILIIYPIRFK 180

Query: 181 ESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240
           E TDVIIATAFFRELMDVGSSEKW+KAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS
Sbjct: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 LRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLN 300
           L HVEGKRLD TVWSLLNFNAYVKYHVKTTRGFIQRRMR+RLEGLVEIL+QK SD  +LN
Sbjct: 241 LHHVEGKRLDNTVWSLLNFNAYVKYHVKTTRGFIQRRMRRRLEGLVEILHQKSSDVAVLN 300

Query: 301 KGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSSI 360
           KGQ  GI YMKKLVA+TK +KQKCR+LS+KIKR RFRIKIPGFARFRRRWLKFPKFSSSI
Sbjct: 301 KGQ--GIKYMKKLVARTKRIKQKCRSLSRKIKRIRFRIKIPGFARFRRRWLKFPKFSSSI 360

Query: 361 GYTRLK 367
            YTRLK
Sbjct: 361 QYTRLK 364

[Close]

BLAST of Moc05g01210 vs. NCBI nr
Match: XP_038883843.1 (actin-related protein 2/3 complex subunit 2B isoform X1 [Benincasa hispida])

HSP 1 Score: 614.8 bits (1584), Expect = 4.9e-172
Identity = 315/367 (85.83%), Postives = 340/367 (92.64%), Query Frame = 0


Query: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60
           MA FQRASPALKEILLKL SLEKPTE+EHHLHEFGSVQY IQ SVS+PQ I+LSI+TPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEMEHHLHEFGSVQYHIQSSVSNPQQIFLSIATPLL 60

Query: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120
           SQ  LLSDGLS +TVEMVKQICSH VEI+EPA+EGYQLTL+ID A+ILHG+ESEKIIT+I
Sbjct: 61  SQAVLLSDGLSPYTVEMVKQICSHAVEIIEPAKEGYQLTLRIDSAKILHGEESEKIITDI 120

Query: 121 AAVQAVILSSQLKEMLRN-VNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRF 180
           AAVQAVI+SSQLKE+LRN VNS A F  T RPIKLVYHPREPFFVIKQ QKILVI+PIRF
Sbjct: 121 AAVQAVIISSQLKEVLRNVVNSPAHFQGTSRPIKLVYHPREPFFVIKQPQKILVIYPIRF 180

Query: 181 KESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDI 240
           KE TDVIIATAFFRELMDVGSSEKW+KAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDI
Sbjct: 181 KEDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDI 240

Query: 241 SLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLL 300
           SL HVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEIL+QK SD+ +L
Sbjct: 241 SLHHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILHQKTSDDAVL 300

Query: 301 NKGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSS 360
           NKG+  GI+YMKKLVA+T  +KQKCR+LS+KIKR RFRI+IPGFARFRRRWLKFPKFSSS
Sbjct: 301 NKGR--GIMYMKKLVARTNRIKQKCRSLSRKIKRIRFRIRIPGFARFRRRWLKFPKFSSS 360

Query: 361 IGYTRLK 367
           I YTRLK
Sbjct: 361 IQYTRLK 365

[Close]

BLAST of Moc05g01210 vs. ExPASy Swiss-Prot
Match: F4IVU1 (Actin-related protein 2/3 complex subunit 2B OS=Arabidopsis thaliana OX=3702 GN=ARPC2B PE=2 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.2e-101
Identity = 194/378 (51.32%), Postives = 273/378 (72.22%), Query Frame = 0


Query: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60
           MA+ +RASP LKE LLK+   EKP E++ H HEFGS++Y I++SVSDP  +++S ST L 
Sbjct: 1   MAYLERASPTLKETLLKIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLLE 60

Query: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120
           +QGA+    +SS+T E++K I   V++IV+P R G+QLTL ++   I  GKE+ KIIT I
Sbjct: 61  TQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKEAIKIITRI 120

Query: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCR-----PIKLVYHPREPFFVIKQAQKILVIF 180
           + +QA+ILSSQLKEMLR++N    F +  R     PI++VYHP EPF+V KQ +KI  +F
Sbjct: 121 SELQAIILSSQLKEMLRSLN----FQDDSRSINNMPIRIVYHPSEPFYVFKQPEKITAVF 180

Query: 181 PIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFV 240
           P+ FK+++DV+IAT+FF+EL++VGS +   KAP C WSPIPP +LRGEP+++L+TN GFV
Sbjct: 181 PMNFKDNSDVVIATSFFQELVEVGSQKDMGKAPQCSWSPIPPLQLRGEPVQDLTTNSGFV 240

Query: 241 TFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSD 300
           +FDI+ RH+EGKRLDKTVW+LLNF A  KYH+K +RG+IQRRMRKR+E LV++L     +
Sbjct: 241 SFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTSLE 300

Query: 301 NVLLNKGQDAGIIYMKKLVAKTK---HLKQKCRNLSKKIKRFRFRIKIPGFARFR--RRW 360
                + ++    Y+K+ V   K    +KQ+C+ +++++K  +FRIKI G ARFR  +RW
Sbjct: 301 EEAA-QNENGRCKYVKEFVKVPKGKLMMKQRCKEMTRRVKISKFRIKINGCARFRFNQRW 360

Query: 361 LKFPKFS---SSIGYTRL 366
           +  PKFS   S   YT+L
Sbjct: 361 ISLPKFSSKPSDKSYTKL 373

[Close]

BLAST of Moc05g01210 vs. ExPASy Swiss-Prot
Match: Q8LGI3 (Actin-related protein 2/3 complex subunit 2A OS=Arabidopsis thaliana OX=3702 GN=ARPC2A PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.2e-57
Identity = 109/281 (38.79%), Postives = 181/281 (64.41%), Query Frame = 0


Query: 11  LKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLLSQGALLSDGL 70
           L+ +L +  +L+K  E+++   EF  V+Y +Q ++ +P  + LS+S P     A+  DGL
Sbjct: 12  LQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKNPNLLLLSVSLPNPPPEAMSFDGL 71

Query: 71  SSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSS 130
               +E +K       +I++P R+G+ LTLK++F+++   +  E+++T++A+++ V++ +
Sbjct: 72  PLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKV---RPDEELLTKLASIREVVMGA 131

Query: 131 QLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATA 190
            LK + +++ S+ +  E  R + +++ P E FF++ QA K+ V FP+RFK+S D I+AT+
Sbjct: 132 PLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKVTVAFPMRFKDSVDTILATS 191

Query: 191 FFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLD 250
           F +E ++   +     AP C WSP  P EL G P E LS N GFVTF I  RHVEGK+LD
Sbjct: 192 FLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFVIFPRHVEGKKLD 251

Query: 251 KTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQ 292
           +TVW+L  F+AYV YHVK + GF+  RMR+R+E +++ L Q
Sbjct: 252 RTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQ 289

[Close]

BLAST of Moc05g01210 vs. ExPASy Swiss-Prot
Match: O96623 (Actin-related protein 2/3 complex subunit 2 OS=Dictyostelium discoideum OX=44689 GN=arcB PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.7e-13
Identity = 64/259 (24.71%), Postives = 130/259 (50.19%), Query Frame = 0


Query: 33  EFGSVQYLIQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPA 92
           +F  V++ +Q S  D  ++ +S+S  L +   LL +G S+    ++K +   +++     
Sbjct: 31  DFDGVKFNVQTS-DDKSSLMVSVS--LHAAADLLKNGGSA----LLKSVYGDMLQ--AKP 90

Query: 93  REGYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPI 152
             GY +TL I   Q       E++  +++ ++  ++++    +   + ++    E    I
Sbjct: 91  EGGYDVTLVI---QSSFSGNKEELAKKVSLLKRHLVAAPFLMVFEGIEAKKPLPEI---I 150

Query: 153 KLVYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCW 212
            + Y   E F++  Q   ++VIF I FK++ DVI++  F +  +DV   +  +  P   +
Sbjct: 151 AINYRTDETFYLKPQGDNVIVIFDIAFKDADDVILSKIFLQSFVDV--RKTISNVPSITF 210

Query: 213 SPIPPP-ELRG-EPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTT 272
           S   PP EL+G + +     N GFV+F +   H+  K+  ++   +  F  Y+ YH+K  
Sbjct: 211 SQKDPPLELKGVKGVRAGQANHGFVSFVLFPAHI--KKPQESADLIQTFRDYLHYHIKCA 270

Query: 273 RGFIQRRMRKRLEGLVEIL 290
           +G++   MR R+E L+++L
Sbjct: 271 KGYMHTSMRNRVESLIQVL 270

[Close]

BLAST of Moc05g01210 vs. ExPASy Swiss-Prot
Match: Q9CVB6 (Actin-related protein 2/3 complex subunit 2 OS=Mus musculus OX=10090 GN=Arpc2 PE=1 SV=3)

HSP 1 Score: 73.9 bits (180), Expect = 4.1e-12
Identity = 65/280 (23.21%), Postives = 118/280 (42.14%), Query Frame = 0


Query: 23  KPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTV-EMVKQI 82
           KP  +E    +F  V Y I     D   + +SIS     +       L +H   E++K++
Sbjct: 27  KPEAVEVTFADFDGVLYHISNPNGDKTKVMVSISLKFYKE-------LQAHGADELLKRV 86

Query: 83  CSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSS------QLKEM 142
               +   EP   GY ++L  D   +   K+S  I+ +   ++    +S      Q +E 
Sbjct: 87  YGSFLVNPEP---GYNVSLLYDLENLPASKDS--IVHQAGMLKRNCFASVFEKYFQFQEE 146

Query: 143 LRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFREL 202
            +   ++A+ H         Y   E  +V  +  ++ V+F   FK+  DV+I   F +E 
Sbjct: 147 GKEGENRAVIH---------YRDDETMYVESKKDRVTVVFSTVFKDDDDVVIGKVFMQEF 206

Query: 203 MDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWS 262
            +   +     AP   +S   PP    +    +  N G++TF +  RH      D T+  
Sbjct: 207 KEGRRASH--TAPQVLFSHREPPLELKDTDAAVGDNIGYITFVLFPRHTNATARDNTINL 266

Query: 263 LLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSD 296
           +  F  Y+ YH+K ++ +I  RMR +    +++L +   D
Sbjct: 267 IHTFRDYLHYHIKCSKAYIHTRMRAKTSDFLKVLNRARPD 283

[Close]

BLAST of Moc05g01210 vs. ExPASy Swiss-Prot
Match: O14241 (Actin-related protein 2/3 complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=arc2 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.1e-12
Identity = 74/309 (23.95%), Postives = 139/309 (44.98%), Query Frame = 0


Query: 13  EILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDP-QNIYLSISTPLLSQGALLSDGLS 72
           E+L +  S E P+ I+  + +F  V     F +S P +   + IS  +     L++ G  
Sbjct: 13  ELLTERFSSENPSSIDQVVTDFDGV----TFHISTPEEKTKILISLSMKCYPELVNYG-- 72

Query: 73  SHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQI-LHGKESEKIITEIAAVQAVILS- 132
             T++++KQI    V   EP   GY  ++ ID  Q+    +E E++   I+ ++  +L+ 
Sbjct: 73  --TLDLLKQIYGAYVH--EP-EMGYNFSILIDLQQLPATDEEKEQLAMSISMLKRNVLAA 132

Query: 133 ---------SQLKEMLRN-------VNSQALFHETCRPIKLVYHPREPFFVIKQAQKILV 192
                    ++L ++ R        ++ QA   E    + + Y   E   +  +  ++ V
Sbjct: 133 PFHRAFTKQAELADLARKDPENAPMLDKQATSQEL---MAIHYRDEETIVLWPEHDRVTV 192

Query: 193 IFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPP-ELRGEPLEELSTNG 252
           +F  +F+E TD I    F +E +D         AP   +S   PP E+R     +   + 
Sbjct: 193 VFSTKFREETDRIFGKVFLQEFVDARRRPAIQTAPQVLFSYRDPPLEIRDIQGIQKGDDF 252

Query: 253 GFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQK 302
           GFVTF +  RH   +  +  +  +  F   + +H+K ++ ++ +RMRKR+    ++L + 
Sbjct: 253 GFVTFVLFERHFTPQNREDCISHIQVFRNTLHFHIKASKAYMHQRMRKRVADFQKVLNRA 307

[Close]

BLAST of Moc05g01210 vs. ExPASy TrEMBL
Match: A0A6J1DLF7 (Arp2/3 complex 34 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111022004 PE=3 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 6.2e-205
Identity = 366/366 (100.00%), Postives = 366/366 (100.00%), Query Frame = 0


Query: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60
           MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL
Sbjct: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60

Query: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120
           SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI
Sbjct: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120

Query: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFK 180
           AAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFK
Sbjct: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFK 180

Query: 181 ESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240
           ESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS
Sbjct: 181 ESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 LRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLN 300
           LRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLN
Sbjct: 241 LRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLN 300

Query: 301 KGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSSI 360
           KGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSSI
Sbjct: 301 KGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSSI 360

Query: 361 GYTRLK 367
           GYTRLK
Sbjct: 361 GYTRLK 366

[Close]

BLAST of Moc05g01210 vs. ExPASy TrEMBL
Match: A0A6J1DKT4 (actin-related protein 2/3 complex subunit 2B isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022004 PE=3 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.8e-181
Identity = 326/332 (98.19%), Postives = 328/332 (98.80%), Query Frame = 0


Query: 35  GSVQYLIQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE 94
           G+    +QFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE
Sbjct: 71  GNPPQTVQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE 130

Query: 95  GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL 154
           GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL
Sbjct: 131 GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL 190

Query: 155 VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP 214
           VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP
Sbjct: 191 VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP 250

Query: 215 IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI 274
           IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI
Sbjct: 251 IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI 310

Query: 275 QRRMRKRLEGLVEILYQKGSDNVLLNKGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRF 334
           QRRMRKRLEGLVEILYQKGSDNVLLNKGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRF
Sbjct: 311 QRRMRKRLEGLVEILYQKGSDNVLLNKGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRF 370

Query: 335 RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK 367
           RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK
Sbjct: 371 RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK 402

[Close]

BLAST of Moc05g01210 vs. ExPASy TrEMBL
Match: A0A6J1DKT8 (Arp2/3 complex 34 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111022004 PE=3 SV=1)

HSP 1 Score: 635.2 bits (1637), Expect = 1.7e-178
Identity = 324/332 (97.59%), Postives = 326/332 (98.19%), Query Frame = 0


Query: 35  GSVQYLIQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE 94
           G+    +QFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE
Sbjct: 71  GNPPQTVQFSVSDPQNIYLSISTPLLSQGALLSDGLSSHTVEMVKQICSHVVEIVEPARE 130

Query: 95  GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL 154
           GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL
Sbjct: 131 GYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSSQLKEMLRNVNSQALFHETCRPIKL 190

Query: 155 VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP 214
           VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP
Sbjct: 191 VYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSP 250

Query: 215 IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI 274
           IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI
Sbjct: 251 IPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFI 310

Query: 275 QRRMRKRLEGLVEILYQKGSDNVLLNKGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRF 334
           QRRMRKRLEGLVEILYQKGSDNVLLNKGQ  GIIYMKKLVAKTKHLKQKCRNLSKKIKRF
Sbjct: 311 QRRMRKRLEGLVEILYQKGSDNVLLNKGQ--GIIYMKKLVAKTKHLKQKCRNLSKKIKRF 370

Query: 335 RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK 367
           RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK
Sbjct: 371 RFRIKIPGFARFRRRWLKFPKFSSSIGYTRLK 400

[Close]

BLAST of Moc05g01210 vs. ExPASy TrEMBL
Match: A0A0A0L4Y8 (Arp2/3 complex 34 kDa subunit OS=Cucumis sativus OX=3659 GN=Csa_3G134720 PE=3 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.8e-172
Identity = 311/366 (84.97%), Postives = 338/366 (92.35%), Query Frame = 0


Query: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60
           MA FQRASPALKEILLKL SLEKPTEIEHHLHE+GSVQY IQ SV DPQ+IYLSI+TPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60

Query: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120
           SQG LLSDGLS +TVEMVKQICSH +EI+EPA+EGY+LTL+I+ A+ILHG+ESEKIIT+I
Sbjct: 61  SQGDLLSDGLSPYTVEMVKQICSHAIEIIEPAKEGYELTLRINSAKILHGEESEKIITDI 120

Query: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFK 180
           AAVQAVI+SS+LKE+LRNVNS  LF    RPIKLVYHPREPFFV+KQ QKIL+I+PIRFK
Sbjct: 121 AAVQAVIISSRLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQPQKILIIYPIRFK 180

Query: 181 ESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240
           E TDVIIATAFFRELMDVGSSEKW+KAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS
Sbjct: 181 EDTDVIIATAFFRELMDVGSSEKWSKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 LRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLN 300
           L HVEGKRLD TVWSLLNFNAYVKYHVKTTRGFIQRRMR+RLEGLVEIL+QK SD  +LN
Sbjct: 241 LHHVEGKRLDNTVWSLLNFNAYVKYHVKTTRGFIQRRMRRRLEGLVEILHQKSSDVAVLN 300

Query: 301 KGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSSI 360
           KGQ  GI YMKKLVA+TK +KQKCR+LS+KIKR RFRIKIPGFARFRRRWLKFPKFSSSI
Sbjct: 301 KGQ--GIKYMKKLVARTKRIKQKCRSLSRKIKRIRFRIKIPGFARFRRRWLKFPKFSSSI 360

Query: 361 GYTRLK 367
            YTRLK
Sbjct: 361 QYTRLK 364

[Close]

BLAST of Moc05g01210 vs. ExPASy TrEMBL
Match: A0A1S3AWJ6 (Arp2/3 complex 34 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103483557 PE=3 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 2.6e-171
Identity = 312/366 (85.25%), Postives = 336/366 (91.80%), Query Frame = 0


Query: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60
           MA FQRASPALKEILLKL SLEKPTEIEHHLHE+GSVQY IQ SV DPQ+IYLSI+TPLL
Sbjct: 1   MACFQRASPALKEILLKLYSLEKPTEIEHHLHEYGSVQYHIQSSVPDPQHIYLSIATPLL 60

Query: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120
           SQG LLSDGLS +TVEMVKQI SH VEI+EPA+EGY+LTL+ID A+ILHG+ESEKIIT+I
Sbjct: 61  SQGVLLSDGLSPYTVEMVKQIFSHAVEIIEPAKEGYELTLRIDSAKILHGEESEKIITDI 120

Query: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFK 180
           AAVQAVI+SSQLKE+LRNVNS  LF    RPIKLVYHPREPFFV+KQ QKIL+I+PIRFK
Sbjct: 121 AAVQAVIISSQLKEVLRNVNSPTLFQGISRPIKLVYHPREPFFVVKQPQKILIIYPIRFK 180

Query: 181 ESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDIS 240
           E TDVIIATAFFRELMDVGSSEKW++APPC WSPIPPPELRGEPLEELSTNGGFVTFDIS
Sbjct: 181 EDTDVIIATAFFRELMDVGSSEKWSEAPPCGWSPIPPPELRGEPLEELSTNGGFVTFDIS 240

Query: 241 LRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSDNVLLN 300
           L HVEGKRLD TVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEIL+QK SD  +LN
Sbjct: 241 LHHVEGKRLDNTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILHQKSSDVAVLN 300

Query: 301 KGQDAGIIYMKKLVAKTKHLKQKCRNLSKKIKRFRFRIKIPGFARFRRRWLKFPKFSSSI 360
           KGQ  GI YMKKLVA TKH+KQKCR+LS+KIKR RFRIKIPGFARFR+RWLKFPKFSSSI
Sbjct: 301 KGQ--GIKYMKKLVASTKHIKQKCRSLSRKIKRIRFRIKIPGFARFRQRWLKFPKFSSSI 360

Query: 361 GYTRLK 367
            YTRLK
Sbjct: 361 QYTRLK 364

[Close]

BLAST of Moc05g01210 vs. TAIR 10
Match: AT2G33385.2 (actin-related protein C2B )

HSP 1 Score: 371.3 bits (952), Expect = 8.8e-103
Identity = 194/378 (51.32%), Postives = 273/378 (72.22%), Query Frame = 0


Query: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60
           MA+ +RASP LKE LLK+   EKP E++ H HEFGS++Y I++SVSDP  +++S ST L 
Sbjct: 1   MAYLERASPTLKETLLKIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLLE 60

Query: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120
           +QGA+    +SS+T E++K I   V++IV+P R G+QLTL ++   I  GKE+ KIIT I
Sbjct: 61  TQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKEAIKIITRI 120

Query: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCR-----PIKLVYHPREPFFVIKQAQKILVIF 180
           + +QA+ILSSQLKEMLR++N    F +  R     PI++VYHP EPF+V KQ +KI  +F
Sbjct: 121 SELQAIILSSQLKEMLRSLN----FQDDSRSINNMPIRIVYHPSEPFYVFKQPEKITAVF 180

Query: 181 PIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFV 240
           P+ FK+++DV+IAT+FF+EL++VGS +   KAP C WSPIPP +LRGEP+++L+TN GFV
Sbjct: 181 PMNFKDNSDVVIATSFFQELVEVGSQKDMGKAPQCSWSPIPPLQLRGEPVQDLTTNSGFV 240

Query: 241 TFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSD 300
           +FDI+ RH+EGKRLDKTVW+LLNF A  KYH+K +RG+IQRRMRKR+E LV++L     +
Sbjct: 241 SFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTSLE 300

Query: 301 NVLLNKGQDAGIIYMKKLVAKTK---HLKQKCRNLSKKIKRFRFRIKIPGFARFR--RRW 360
                + ++    Y+K+ V   K    +KQ+C+ +++++K  +FRIKI G ARFR  +RW
Sbjct: 301 EEAA-QNENGRCKYVKEFVKVPKGKLMMKQRCKEMTRRVKISKFRIKINGCARFRFNQRW 360

Query: 361 LKFPKFS---SSIGYTRL 366
           +  PKFS   S   YT+L
Sbjct: 361 ISLPKFSSKPSDKSYTKL 373

[Close]

BLAST of Moc05g01210 vs. TAIR 10
Match: AT2G33385.1 (actin-related protein C2B )

HSP 1 Score: 354.8 bits (909), Expect = 8.6e-98
Identity = 189/378 (50.00%), Postives = 267/378 (70.63%), Query Frame = 0


Query: 1   MAFFQRASPALKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLL 60
           MA+ +RASP LKE LLK+   EKP E++ H HEFGS++Y I++SVSDP  +++S ST L 
Sbjct: 1   MAYLERASPTLKETLLKIYRAEKPIEVDQHFHEFGSIEYHIKYSVSDPNIVHVSTSTLLE 60

Query: 61  SQGALLSDGLSSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEI 120
           +QGA+    +SS+T E++K I   V++IV+P R G+QLTL ++   I  GKE+ KIIT I
Sbjct: 61  TQGAVTLKEISSYTYEVIKNIGVGVIDIVDPPRLGFQLTLGLNLDNIPRGKEAIKIITRI 120

Query: 121 AAVQAVILSSQLKEMLRNVNSQALFHETCR-----PIKLVYHPREPFFVIKQAQKILVIF 180
           + +QA+ILSSQLKEMLR++N    F +  R     PI++VYHP EPF+V KQ +KI  +F
Sbjct: 121 SELQAIILSSQLKEMLRSLN----FQDDSRSINNMPIRIVYHPSEPFYVFKQPEKITAVF 180

Query: 181 PIRFKESTDVIIATAFFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFV 240
           P+ FK+++DV+IAT+FF+++          KAP C WSPIPP +LRGEP+++L+TN GFV
Sbjct: 181 PMNFKDNSDVVIATSFFQDM---------GKAPQCSWSPIPPLQLRGEPVQDLTTNSGFV 240

Query: 241 TFDISLRHVEGKRLDKTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQKGSD 300
           +FDI+ RH+EGKRLDKTVW+LLNF A  KYH+K +RG+IQRRMRKR+E LV++L     +
Sbjct: 241 SFDITSRHIEGKRLDKTVWNLLNFYACAKYHIKCSRGYIQRRMRKRMETLVKLLNNTSLE 300

Query: 301 NVLLNKGQDAGIIYMKKLVAKTK---HLKQKCRNLSKKIKRFRFRIKIPGFARFR--RRW 360
                + ++    Y+K+ V   K    +KQ+C+ +++++K  +FRIKI G ARFR  +RW
Sbjct: 301 EEAA-QNENGRCKYVKEFVKVPKGKLMMKQRCKEMTRRVKISKFRIKINGCARFRFNQRW 360

Query: 361 LKFPKFS---SSIGYTRL 366
           +  PKFS   S   YT+L
Sbjct: 361 ISLPKFSSKPSDKSYTKL 364

[Close]

BLAST of Moc05g01210 vs. TAIR 10
Match: AT1G30825.1 (Arp2/3 complex, 34 kD subunit p34-Arc )

HSP 1 Score: 223.8 bits (569), Expect = 2.3e-58
Identity = 109/281 (38.79%), Postives = 181/281 (64.41%), Query Frame = 0


Query: 11  LKEILLKLCSLEKPTEIEHHLHEFGSVQYLIQFSVSDPQNIYLSISTPLLSQGALLSDGL 70
           L+ +L +  +L+K  E+++   EF  V+Y +Q ++ +P  + LS+S P     A+  DGL
Sbjct: 12  LQTLLTRAQNLDKAVELDYQWIEFDDVRYHVQVTMKNPNLLLLSVSLPNPPPEAMSFDGL 71

Query: 71  SSHTVEMVKQICSHVVEIVEPAREGYQLTLKIDFAQILHGKESEKIITEIAAVQAVILSS 130
               +E +K       +I++P R+G+ LTLK++F+++   +  E+++T++A+++ V++ +
Sbjct: 72  PLGAIEAIKTTYGTGFQILDPPRDGFSLTLKLNFSKV---RPDEELLTKLASIREVVMGA 131

Query: 131 QLKEMLRNVNSQALFHETCRPIKLVYHPREPFFVIKQAQKILVIFPIRFKESTDVIIATA 190
            LK + +++ S+ +  E  R + +++ P E FF++ QA K+ V FP+RFK+S D I+AT+
Sbjct: 132 PLKIIFKHLASRTVAPELDRLVAIMHRPNETFFLVPQADKVTVAFPMRFKDSVDTILATS 191

Query: 191 FFRELMDVGSSEKWAKAPPCCWSPIPPPELRGEPLEELSTNGGFVTFDISLRHVEGKRLD 250
           F +E ++   +     AP C WSP  P EL G P E LS N GFVTF I  RHVEGK+LD
Sbjct: 192 FLKEFVEARRAAALNTAPSCSWSPTAPQELEGAPKETLSANAGFVTFVIFPRHVEGKKLD 251

Query: 251 KTVWSLLNFNAYVKYHVKTTRGFIQRRMRKRLEGLVEILYQ 292
           +TVW+L  F+AYV YHVK + GF+  RMR+R+E +++ L Q
Sbjct: 252 RTVWNLSTFHAYVSYHVKFSEGFMHTRMRRRVESMIQALDQ 289

The following BLAST results are available for this feature:

BLAST of Moc05g01210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154858.1	1.3e-204	100.00	actin-related protein 2/3 complex subunit 2B isoform X3 [Momordica charantia]	[more]
XP_022154845.1	5.8e-181	98.19	actin-related protein 2/3 complex subunit 2B isoform X1 [Momordica charantia]	[more]
XP_022154850.1	3.5e-178	97.59	actin-related protein 2/3 complex subunit 2B isoform X2 [Momordica charantia]	[more]
XP_004134045.2	3.8e-172	84.97	actin-related protein 2/3 complex subunit 2B [Cucumis sativus] >KGN56823.1 hypot...	[more]
XP_038883843.1	4.9e-172	85.83	actin-related protein 2/3 complex subunit 2B isoform X1 [Benincasa hispida]	[more]

BLAST of Moc05g01210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IVU1	1.2e-101	51.32	Actin-related protein 2/3 complex subunit 2B OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q8LGI3	3.2e-57	38.79	Actin-related protein 2/3 complex subunit 2A OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O96623	3.7e-13	24.71	Actin-related protein 2/3 complex subunit 2 OS=Dictyostelium discoideum OX=44689...	[more]
Q9CVB6	4.1e-12	23.21	Actin-related protein 2/3 complex subunit 2 OS=Mus musculus OX=10090 GN=Arpc2 PE...	[more]
O14241	4.1e-12	23.95	Actin-related protein 2/3 complex subunit 2 OS=Schizosaccharomyces pombe (strain...	[more]

BLAST of Moc05g01210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLF7	6.2e-205	100.00	Arp2/3 complex 34 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111022004 PE=...	[more]
A0A6J1DKT4	2.8e-181	98.19	actin-related protein 2/3 complex subunit 2B isoform X1 OS=Momordica charantia O...	[more]
A0A6J1DKT8	1.7e-178	97.59	Arp2/3 complex 34 kDa subunit OS=Momordica charantia OX=3673 GN=LOC111022004 PE=...	[more]
A0A0A0L4Y8	1.8e-172	84.97	Arp2/3 complex 34 kDa subunit OS=Cucumis sativus OX=3659 GN=Csa_3G134720 PE=3 SV...	[more]
A0A1S3AWJ6	2.6e-171	85.25	Arp2/3 complex 34 kDa subunit OS=Cucumis melo OX=3656 GN=LOC103483557 PE=3 SV=1	[more]

BLAST of Moc05g01210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33385.2	8.8e-103	51.32	actin-related protein C2B	[more]
AT2G33385.1	8.6e-98	50.00	actin-related protein C2B	[more]
AT1G30825.1	2.3e-58	38.79	Arp2/3 complex, 34 kD subunit p34-Arc	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 310..330
None	No IPR available	PANTHER	PTHR12058:SF1	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 2B	coord: 1..365
IPR007188	Actin-related protein 2/3 complex subunit 2	PFAM	PF04045	P34-Arc	coord: 78..290 e-value: 4.7E-32 score: 111.6
IPR007188	Actin-related protein 2/3 complex subunit 2	PANTHER	PTHR12058	ARP2/3 COMPLEX 34 KDA SUBUNIT	coord: 1..365
IPR034666	Arp2/3 complex subunit 2/4	GENE3D	3.30.1460.20		coord: 145..294 e-value: 1.6E-45 score: 156.6
IPR034666	Arp2/3 complex subunit 2/4	GENE3D	3.30.1460.20		coord: 1..137 e-value: 1.1E-27 score: 98.9
IPR034666	Arp2/3 complex subunit 2/4	SUPERFAMILY	69645	Arp2/3 complex subunits	coord: 1..126
IPR034666	Arp2/3 complex subunit 2/4	SUPERFAMILY	69645	Arp2/3 complex subunits	coord: 133..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g01210.1	Moc05g01210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0030833	regulation of actin filament polymerization
biological_process	GO:0030041	actin filament polymerization
cellular_component	GO:0005885	Arp2/3 protein complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0005200	structural constituent of cytoskeleton