Moc05g01100 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc05g01100
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionEmbryo sac development arrest protein
Locationchr5: 726109 .. 726492 (-)
RNA-Seq ExpressionMoc05g01100
SyntenyMoc05g01100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTCCACAGCCGTGGGCTGTTATCGGCTGGGCCGTCCAGAAAGCGGAAGGAGCCGTCGGCTCATTACGACGTCAAGCCATCGACTCCGAGAACCGGAGAGCCTCCGGTTTCTTCGAACCGGCTGCTAGCCGGGTACATGGCTTATGAGTTTCTGACGAAAGGAACCATATTGGGCCGGAAGTTCGACCCGGCTCGAGGCGAACCAAGCCCATCCAGCCCTGCCACGTGGAAGAAAGCGAAAACGGGAGCCGAGGAGCCGTCAGAGACGAAGAAAGAGCATCAGAGCTACTCGGAGGTGGCGAGCATTCTGAAGACAGATGGGGCCCACATACCCGGGGTCGTGAACCCGAGCCAGCTGGCTCGGTGGCTTCAGAAGTGA

mRNA sequence

ATGAGTTTCCACAGCCGTGGGCTGTTATCGGCTGGGCCGTCCAGAAAGCGGAAGGAGCCGTCGGCTCATTACGACGTCAAGCCATCGACTCCGAGAACCGGAGAGCCTCCGGTTTCTTCGAACCGGCTGCTAGCCGGGTACATGGCTTATGAGTTTCTGACGAAAGGAACCATATTGGGCCGGAAGTTCGACCCGGCTCGAGGCGAACCAAGCCCATCCAGCCCTGCCACGTGGAAGAAAGCGAAAACGGGAGCCGAGGAGCCGTCAGAGACGAAGAAAGAGCATCAGAGCTACTCGGAGGTGGCGAGCATTCTGAAGACAGATGGGGCCCACATACCCGGGGTCGTGAACCCGAGCCAGCTGGCTCGGTGGCTTCAGAAGTGA

Coding sequence (CDS)

ATGAGTTTCCACAGCCGTGGGCTGTTATCGGCTGGGCCGTCCAGAAAGCGGAAGGAGCCGTCGGCTCATTACGACGTCAAGCCATCGACTCCGAGAACCGGAGAGCCTCCGGTTTCTTCGAACCGGCTGCTAGCCGGGTACATGGCTTATGAGTTTCTGACGAAAGGAACCATATTGGGCCGGAAGTTCGACCCGGCTCGAGGCGAACCAAGCCCATCCAGCCCTGCCACGTGGAAGAAAGCGAAAACGGGAGCCGAGGAGCCGTCAGAGACGAAGAAAGAGCATCAGAGCTACTCGGAGGTGGCGAGCATTCTGAAGACAGATGGGGCCCACATACCCGGGGTCGTGAACCCGAGCCAGCTGGCTCGGTGGCTTCAGAAGTGA

Protein sequence

MSFHSRGLLSAGPSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRKFDPARGEPSPSSPATWKKAKTGAEEPSETKKEHQSYSEVASILKTDGAHIPGVVNPSQLARWLQK
Homology
BLAST of Moc05g01100 vs. NCBI nr
Match: KGN56835.1 (hypothetical protein Csa_009887 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 2.3e-36
Identity = 87/131 (66.41%), Postives = 99/131 (75.57%), Query Frame = 0

Query: 3   FHSRGLLSAGPSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRK 62
           FHSRGLLSAGPS+KRKEPS      PS  + GEP VSSNRLLAGYMAYEFLTKGT+ GRK
Sbjct: 5   FHSRGLLSAGPSKKRKEPST-----PSASKAGEPSVSSNRLLAGYMAYEFLTKGTLFGRK 64

Query: 63  FDPARGEPSPSSPAT----WKKAKTGAEEPSETKKEH--QSYSEVASILKTDGAHIPGVV 122
           FDP R E +PS+ +     WKK K+ A  P   KKEH  QSY+EVA+ILKT G+HI G+V
Sbjct: 65  FDPPRDEATPSAASAAVIQWKKPKSDAAPPEILKKEHQIQSYAEVANILKTTGSHISGIV 124

Query: 123 NPSQLARWLQK 128
           NP+QL RWLQK
Sbjct: 125 NPTQLGRWLQK 130

BLAST of Moc05g01100 vs. NCBI nr
Match: XP_022924296.1 (uncharacterized protein LOC111431827 [Cucurbita moschata] >KAG6582401.1 hypothetical protein SDJN03_22403, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018804.1 hypothetical protein SDJN02_20677, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.2 bits (409), Expect = 3.0e-36
Identity = 86/127 (67.72%), Postives = 97/127 (76.38%), Query Frame = 0

Query: 3   FHSRGLLSAGPSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRK 62
           FHSRGLL AGPSRKRKEP+A         +  EPPVSSNRLLAGYMAYEFLTKGTILGR+
Sbjct: 5   FHSRGLLPAGPSRKRKEPAA--------LKASEPPVSSNRLLAGYMAYEFLTKGTILGRE 64

Query: 63  FDPARGEPSPSSPATWKKAKTGAEEPSETKKEH--QSYSEVASILKTDGAHIPGVVNPSQ 122
           F+P R E  PS+ A WKK+K+ A  P   KKEH  QSY+EVA+ILKT G HIP +VNP+Q
Sbjct: 65  FNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGGHIPEIVNPTQ 123

Query: 123 LARWLQK 128
           L RWLQK
Sbjct: 125 LGRWLQK 123

BLAST of Moc05g01100 vs. NCBI nr
Match: XP_023526927.1 (uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.1 bits (401), Expect = 2.6e-35
Identity = 85/127 (66.93%), Postives = 96/127 (75.59%), Query Frame = 0

Query: 3   FHSRGLLSAGPSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRK 62
           FHSRGLL AGPSRKRKEP+A         +  EP VSSNRLLAGYMAYEFLTKGTILGR+
Sbjct: 5   FHSRGLLPAGPSRKRKEPAA--------LKASEPSVSSNRLLAGYMAYEFLTKGTILGRE 64

Query: 63  FDPARGEPSPSSPATWKKAKTGAEEPSETKKEH--QSYSEVASILKTDGAHIPGVVNPSQ 122
           F+P R E  PS+ A WKK+K+ A  P   KKEH  QSY+EVA+ILKT G HIP +VNP+Q
Sbjct: 65  FNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGGHIPEIVNPTQ 123

Query: 123 LARWLQK 128
           L RWLQK
Sbjct: 125 LGRWLQK 123

BLAST of Moc05g01100 vs. NCBI nr
Match: XP_008438490.1 (PREDICTED: uncharacterized protein LOC103483571 [Cucumis melo] >KAA0049230.1 uncharacterized protein E6C27_scaffold171G004700 [Cucumis melo var. makuwa] >TYK17328.1 uncharacterized protein E5676_scaffold434G001830 [Cucumis melo var. makuwa])

HSP 1 Score: 158.3 bits (399), Expect = 4.4e-35
Identity = 88/132 (66.67%), Postives = 98/132 (74.24%), Query Frame = 0

Query: 3   FHSRGLLSAGPSRKRKEPSAHYDVKPSTP-RTGEPPVSSNRLLAGYMAYEFLTKGTILGR 62
           FHSRGLLSAGPS+KRKEPS      P+ P + GEP V SNRLLAGYMAYEFLTKGT+ GR
Sbjct: 5   FHSRGLLSAGPSKKRKEPST-----PAPPNKAGEPSVLSNRLLAGYMAYEFLTKGTLFGR 64

Query: 63  KFDPARGEPSPSSPAT--WKKAKTGAEEPSETKKEH----QSYSEVASILKTDGAHIPGV 122
           KFDP R E +PSS A   WKK K  A  P   KKEH    QSY+EVA+ILKT G+HI G+
Sbjct: 65  KFDPTRDEATPSSAAVSQWKKPKFEAAPPEILKKEHQNQIQSYAEVANILKTTGSHISGI 124

Query: 123 VNPSQLARWLQK 128
           VNP+QL RWLQK
Sbjct: 125 VNPTQLGRWLQK 131

BLAST of Moc05g01100 vs. NCBI nr
Match: XP_022979583.1 (uncharacterized protein LOC111479265 [Cucurbita maxima])

HSP 1 Score: 157.9 bits (398), Expect = 5.7e-35
Identity = 84/127 (66.14%), Postives = 96/127 (75.59%), Query Frame = 0

Query: 3   FHSRGLLSAGPSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRK 62
           FH RGLL  GPSRKRKEP+A         +  EPPVSSNRLLAGYMAYEFLTKGTILGR+
Sbjct: 5   FHIRGLLPPGPSRKRKEPAA--------LKASEPPVSSNRLLAGYMAYEFLTKGTILGRE 64

Query: 63  FDPARGEPSPSSPATWKKAKTGAEEPSETKKEH--QSYSEVASILKTDGAHIPGVVNPSQ 122
           F+P + E  PS+ A WKK+K+ A  P   KKEH  QSY+EVA+ILKT GAHIP +VNP+Q
Sbjct: 65  FNPGQAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGAHIPEIVNPTQ 123

Query: 123 LARWLQK 128
           L RWLQK
Sbjct: 125 LGRWLQK 123

BLAST of Moc05g01100 vs. ExPASy TrEMBL
Match: A0A0A0L4C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134830 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.1e-36
Identity = 87/131 (66.41%), Postives = 99/131 (75.57%), Query Frame = 0

Query: 3   FHSRGLLSAGPSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRK 62
           FHSRGLLSAGPS+KRKEPS      PS  + GEP VSSNRLLAGYMAYEFLTKGT+ GRK
Sbjct: 5   FHSRGLLSAGPSKKRKEPST-----PSASKAGEPSVSSNRLLAGYMAYEFLTKGTLFGRK 64

Query: 63  FDPARGEPSPSSPAT----WKKAKTGAEEPSETKKEH--QSYSEVASILKTDGAHIPGVV 122
           FDP R E +PS+ +     WKK K+ A  P   KKEH  QSY+EVA+ILKT G+HI G+V
Sbjct: 65  FDPPRDEATPSAASAAVIQWKKPKSDAAPPEILKKEHQIQSYAEVANILKTTGSHISGIV 124

Query: 123 NPSQLARWLQK 128
           NP+QL RWLQK
Sbjct: 125 NPTQLGRWLQK 130

BLAST of Moc05g01100 vs. ExPASy TrEMBL
Match: A0A6J1E960 (uncharacterized protein LOC111431827 OS=Cucurbita moschata OX=3662 GN=LOC111431827 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.5e-36
Identity = 86/127 (67.72%), Postives = 97/127 (76.38%), Query Frame = 0

Query: 3   FHSRGLLSAGPSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRK 62
           FHSRGLL AGPSRKRKEP+A         +  EPPVSSNRLLAGYMAYEFLTKGTILGR+
Sbjct: 5   FHSRGLLPAGPSRKRKEPAA--------LKASEPPVSSNRLLAGYMAYEFLTKGTILGRE 64

Query: 63  FDPARGEPSPSSPATWKKAKTGAEEPSETKKEH--QSYSEVASILKTDGAHIPGVVNPSQ 122
           F+P R E  PS+ A WKK+K+ A  P   KKEH  QSY+EVA+ILKT G HIP +VNP+Q
Sbjct: 65  FNPGRAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGGHIPEIVNPTQ 123

Query: 123 LARWLQK 128
           L RWLQK
Sbjct: 125 LGRWLQK 123

BLAST of Moc05g01100 vs. ExPASy TrEMBL
Match: A0A5A7U1L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001830 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.1e-35
Identity = 88/132 (66.67%), Postives = 98/132 (74.24%), Query Frame = 0

Query: 3   FHSRGLLSAGPSRKRKEPSAHYDVKPSTP-RTGEPPVSSNRLLAGYMAYEFLTKGTILGR 62
           FHSRGLLSAGPS+KRKEPS      P+ P + GEP V SNRLLAGYMAYEFLTKGT+ GR
Sbjct: 5   FHSRGLLSAGPSKKRKEPST-----PAPPNKAGEPSVLSNRLLAGYMAYEFLTKGTLFGR 64

Query: 63  KFDPARGEPSPSSPAT--WKKAKTGAEEPSETKKEH----QSYSEVASILKTDGAHIPGV 122
           KFDP R E +PSS A   WKK K  A  P   KKEH    QSY+EVA+ILKT G+HI G+
Sbjct: 65  KFDPTRDEATPSSAAVSQWKKPKFEAAPPEILKKEHQNQIQSYAEVANILKTTGSHISGI 124

Query: 123 VNPSQLARWLQK 128
           VNP+QL RWLQK
Sbjct: 125 VNPTQLGRWLQK 131

BLAST of Moc05g01100 vs. ExPASy TrEMBL
Match: A0A1S3AWH5 (uncharacterized protein LOC103483571 OS=Cucumis melo OX=3656 GN=LOC103483571 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.1e-35
Identity = 88/132 (66.67%), Postives = 98/132 (74.24%), Query Frame = 0

Query: 3   FHSRGLLSAGPSRKRKEPSAHYDVKPSTP-RTGEPPVSSNRLLAGYMAYEFLTKGTILGR 62
           FHSRGLLSAGPS+KRKEPS      P+ P + GEP V SNRLLAGYMAYEFLTKGT+ GR
Sbjct: 5   FHSRGLLSAGPSKKRKEPST-----PAPPNKAGEPSVLSNRLLAGYMAYEFLTKGTLFGR 64

Query: 63  KFDPARGEPSPSSPAT--WKKAKTGAEEPSETKKEH----QSYSEVASILKTDGAHIPGV 122
           KFDP R E +PSS A   WKK K  A  P   KKEH    QSY+EVA+ILKT G+HI G+
Sbjct: 65  KFDPTRDEATPSSAAVSQWKKPKFEAAPPEILKKEHQNQIQSYAEVANILKTTGSHISGI 124

Query: 123 VNPSQLARWLQK 128
           VNP+QL RWLQK
Sbjct: 125 VNPTQLGRWLQK 131

BLAST of Moc05g01100 vs. ExPASy TrEMBL
Match: A0A6J1IWN8 (uncharacterized protein LOC111479265 OS=Cucurbita maxima OX=3661 GN=LOC111479265 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.8e-35
Identity = 84/127 (66.14%), Postives = 96/127 (75.59%), Query Frame = 0

Query: 3   FHSRGLLSAGPSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRK 62
           FH RGLL  GPSRKRKEP+A         +  EPPVSSNRLLAGYMAYEFLTKGTILGR+
Sbjct: 5   FHIRGLLPPGPSRKRKEPAA--------LKASEPPVSSNRLLAGYMAYEFLTKGTILGRE 64

Query: 63  FDPARGEPSPSSPATWKKAKTGAEEPSETKKEH--QSYSEVASILKTDGAHIPGVVNPSQ 122
           F+P + E  PS+ A WKK+K+ A  P   KKEH  QSY+EVA+ILKT GAHIP +VNP+Q
Sbjct: 65  FNPGQAEAIPSAAAQWKKSKSEAAPPEILKKEHQIQSYTEVATILKTTGAHIPEIVNPTQ 123

Query: 123 LARWLQK 128
           L RWLQK
Sbjct: 125 LGRWLQK 123

BLAST of Moc05g01100 vs. TAIR 10
Match: AT3G23440.1 (embryo sac development arrest 6 )

HSP 1 Score: 89.0 bits (219), Expect = 3.0e-18
Identity = 55/116 (47.41%), Postives = 71/116 (61.21%), Query Frame = 0

Query: 12  GPSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRKFDPARGEPS 71
           G SRKRK+  +  D++ +         + N LLAGYMA+E+LT GT+LGRK      E  
Sbjct: 10  GASRKRKDTES--DLREA--------ATPNWLLAGYMAHEYLTCGTMLGRKLYSGWAEVG 69

Query: 72  P-SSPATWKKAKTGAEEPSETKKEHQSYSEVASILKTDGAHIPGVVNPSQLARWLQ 127
           P  SP+          +  E KK  QSYSEVAS+ KTDG H+PGVVNP+QLA+W+Q
Sbjct: 70  PLVSPSPL--------QSREVKKARQSYSEVASVFKTDGNHVPGVVNPTQLAKWIQ 107

BLAST of Moc05g01100 vs. TAIR 10
Match: AT5G44060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 82.0 bits (201), Expect = 3.7e-16
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 0

Query: 37  PVSSNRLLAGYMAYEFLTKGTILGRKFDPARGEPSPSSPATWKKAKTGAE---EPSETKK 96
           PV SN+LLAGY+A+EFL  GT+ G  ++P + +  P +  +    K       EPS+ K+
Sbjct: 59  PVCSNQLLAGYLAHEFLNNGTLFGELWNPTKAQAGPLTTQSIDPRKNKPSHDIEPSDHKR 118

Query: 97  EHQSYSEVASILKTDGAHIPGVVNPSQLARWLQ 127
             + Y EVA+IL+ DG H+PG+VNPSQLAR+L+
Sbjct: 119 --RRYVEVANILRVDGTHLPGIVNPSQLARFLK 149

BLAST of Moc05g01100 vs. TAIR 10
Match: AT1G04000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 4.5e-14
Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 0

Query: 13  PSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRKFDPARGEPSP 72
           P  K   P  +   K S+    EP  S+  +LAGY+++E+LT+GT+ G +++ AR +   
Sbjct: 42  PPPKLVPPPVNPISKKSSTAAAEPIGSNQLMLAGYLSHEYLTQGTLFGEQWNQARAQAES 101

Query: 73  SSPATWKKAKTGAEEPSETKKEHQSYSEVASILKTDGAHIPGVVNPSQLARWLQ 127
           S      K     E   E + + + Y EVA++L++DGA +PG+VNP+QLAR+L+
Sbjct: 102 SK----IKPSHTVEPAEECEPKRKRYREVANLLRSDGAQLPGIVNPAQLARFLK 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN56835.12.3e-3666.41hypothetical protein Csa_009887 [Cucumis sativus][more]
XP_022924296.13.0e-3667.72uncharacterized protein LOC111431827 [Cucurbita moschata] >KAG6582401.1 hypothet... [more]
XP_023526927.12.6e-3566.93uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo][more]
XP_008438490.14.4e-3566.67PREDICTED: uncharacterized protein LOC103483571 [Cucumis melo] >KAA0049230.1 unc... [more]
XP_022979583.15.7e-3566.14uncharacterized protein LOC111479265 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L4C11.1e-3666.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134830 PE=4 SV=1[more]
A0A6J1E9601.5e-3667.72uncharacterized protein LOC111431827 OS=Cucurbita moschata OX=3662 GN=LOC1114318... [more]
A0A5A7U1L22.1e-3566.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3AWH52.1e-3566.67uncharacterized protein LOC103483571 OS=Cucumis melo OX=3656 GN=LOC103483571 PE=... [more]
A0A6J1IWN82.8e-3566.14uncharacterized protein LOC111479265 OS=Cucurbita maxima OX=3661 GN=LOC111479265... [more]
Match NameE-valueIdentityDescription
AT3G23440.13.0e-1847.41embryo sac development arrest 6 [more]
AT5G44060.13.7e-1646.24unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G04000.14.5e-1436.84unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..99
NoneNo IPR availablePANTHERPTHR34657EMBRYO SAC DEVELOPMENT ARREST 6coord: 35..127
NoneNo IPR availablePANTHERPTHR34657:SF4EMBRYO SAC DEVELOPMENT ARREST 6coord: 35..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc05g01100.1Moc05g01100.1mRNA