Moc05g01100 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCCACAGCCGTGGGCTGTTATCGGCTGGGCCGTCCAGAAAGCGGAAGGAGCCGTCGGCTCATTACGACGTCAAGCCATCGACTCCGAGAACCGGAGAGCCTCCGGTTTCTTCGAACCGGCTGCTAGCCGGGTACATGGCTTATGAGTTTCTGACGAAAGGAACCATATTGGGCCGGAAGTTCGACCCGGCTCGAGGCGAACCAAGCCCATCCAGCCCTGCCACGTGGAAGAAAGCGAAAACGGGAGCCGAGGAGCCGTCAGAGACGAAGAAAGAGCATCAGAGCTACTCGGAGGTGGCGAGCATTCTGAAGACAGATGGGGCCCACATACCCGGGGTCGTGAACCCGAGCCAGCTGGCTCGGTGGCTTCAGAAGTGA ATGAGTTTCCACAGCCGTGGGCTGTTATCGGCTGGGCCGTCCAGAAAGCGGAAGGAGCCGTCGGCTCATTACGACGTCAAGCCATCGACTCCGAGAACCGGAGAGCCTCCGGTTTCTTCGAACCGGCTGCTAGCCGGGTACATGGCTTATGAGTTTCTGACGAAAGGAACCATATTGGGCCGGAAGTTCGACCCGGCTCGAGGCGAACCAAGCCCATCCAGCCCTGCCACGTGGAAGAAAGCGAAAACGGGAGCCGAGGAGCCGTCAGAGACGAAGAAAGAGCATCAGAGCTACTCGGAGGTGGCGAGCATTCTGAAGACAGATGGGGCCCACATACCCGGGGTCGTGAACCCGAGCCAGCTGGCTCGGTGGCTTCAGAAGTGA ATGAGTTTCCACAGCCGTGGGCTGTTATCGGCTGGGCCGTCCAGAAAGCGGAAGGAGCCGTCGGCTCATTACGACGTCAAGCCATCGACTCCGAGAACCGGAGAGCCTCCGGTTTCTTCGAACCGGCTGCTAGCCGGGTACATGGCTTATGAGTTTCTGACGAAAGGAACCATATTGGGCCGGAAGTTCGACCCGGCTCGAGGCGAACCAAGCCCATCCAGCCCTGCCACGTGGAAGAAAGCGAAAACGGGAGCCGAGGAGCCGTCAGAGACGAAGAAAGAGCATCAGAGCTACTCGGAGGTGGCGAGCATTCTGAAGACAGATGGGGCCCACATACCCGGGGTCGTGAACCCGAGCCAGCTGGCTCGGTGGCTTCAGAAGTGA MSFHSRGLLSAGPSRKRKEPSAHYDVKPSTPRTGEPPVSSNRLLAGYMAYEFLTKGTILGRKFDPARGEPSPSSPATWKKAKTGAEEPSETKKEHQSYSEVASILKTDGAHIPGVVNPSQLARWLQK Homology
BLAST of Moc05g01100 vs. NCBI nr
Match: KGN56835.1 (hypothetical protein Csa_009887 [Cucumis sativus]) HSP 1 Score: 162.5 bits (410), Expect = 2.3e-36 Identity = 87/131 (66.41%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Moc05g01100 vs. NCBI nr
Match: XP_022924296.1 (uncharacterized protein LOC111431827 [Cucurbita moschata] >KAG6582401.1 hypothetical protein SDJN03_22403, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018804.1 hypothetical protein SDJN02_20677, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.2 bits (409), Expect = 3.0e-36 Identity = 86/127 (67.72%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of Moc05g01100 vs. NCBI nr
Match: XP_023526927.1 (uncharacterized protein LOC111790299 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.1 bits (401), Expect = 2.6e-35 Identity = 85/127 (66.93%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of Moc05g01100 vs. NCBI nr
Match: XP_008438490.1 (PREDICTED: uncharacterized protein LOC103483571 [Cucumis melo] >KAA0049230.1 uncharacterized protein E6C27_scaffold171G004700 [Cucumis melo var. makuwa] >TYK17328.1 uncharacterized protein E5676_scaffold434G001830 [Cucumis melo var. makuwa]) HSP 1 Score: 158.3 bits (399), Expect = 4.4e-35 Identity = 88/132 (66.67%), Postives = 98/132 (74.24%), Query Frame = 0
BLAST of Moc05g01100 vs. NCBI nr
Match: XP_022979583.1 (uncharacterized protein LOC111479265 [Cucurbita maxima]) HSP 1 Score: 157.9 bits (398), Expect = 5.7e-35 Identity = 84/127 (66.14%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of Moc05g01100 vs. ExPASy TrEMBL
Match: A0A0A0L4C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134830 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 1.1e-36 Identity = 87/131 (66.41%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Moc05g01100 vs. ExPASy TrEMBL
Match: A0A6J1E960 (uncharacterized protein LOC111431827 OS=Cucurbita moschata OX=3662 GN=LOC111431827 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.5e-36 Identity = 86/127 (67.72%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of Moc05g01100 vs. ExPASy TrEMBL
Match: A0A5A7U1L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001830 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.1e-35 Identity = 88/132 (66.67%), Postives = 98/132 (74.24%), Query Frame = 0
BLAST of Moc05g01100 vs. ExPASy TrEMBL
Match: A0A1S3AWH5 (uncharacterized protein LOC103483571 OS=Cucumis melo OX=3656 GN=LOC103483571 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.1e-35 Identity = 88/132 (66.67%), Postives = 98/132 (74.24%), Query Frame = 0
BLAST of Moc05g01100 vs. ExPASy TrEMBL
Match: A0A6J1IWN8 (uncharacterized protein LOC111479265 OS=Cucurbita maxima OX=3661 GN=LOC111479265 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.8e-35 Identity = 84/127 (66.14%), Postives = 96/127 (75.59%), Query Frame = 0
BLAST of Moc05g01100 vs. TAIR 10
Match: AT3G23440.1 (embryo sac development arrest 6 ) HSP 1 Score: 89.0 bits (219), Expect = 3.0e-18 Identity = 55/116 (47.41%), Postives = 71/116 (61.21%), Query Frame = 0
BLAST of Moc05g01100 vs. TAIR 10
Match: AT5G44060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 82.0 bits (201), Expect = 3.7e-16 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of Moc05g01100 vs. TAIR 10
Match: AT1G04000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.1 bits (183), Expect = 4.5e-14 Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|