Moc05g00930 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g00930
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Actin-depolymerizing factor
Location	chr5: 624187 .. 625956 (-)
RNA-Seq Expression	Moc05g00930
Synteny	Moc05g00930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCCCCTAAGGTACATTCTAAGGCAAACTTGACTTGGCAGGCATGAACGTCGAAAGTGGCGAGGAGTCACTCGCCAACGTAGAGTGCACGTTTGAACTCCGATTGACACGAAACTTGGCGTGCTTACATATCTCACTAATATGCATCTAACGTTAAAGCCGCTCGTCCAAACTCTTGACAGAACCCCAACTTCTAGGGTCGTGGCCCGGGGCCCCAACTGGCCCCCGTTGAGCTTGTCACCGACACCACTGACGTCGCCTTCGCTTTGCATTCTGCATATGCCTTCTCTAGGCATTCTTGAGCACATCCATATGGTGTGATAGGTGATGCACCATCCTCCTTGGTCGCATCACGGCACTTCACTCTCGGCCCTTGACATGGCCCGATGGGCGACATATGCTTGTCGCTGACACTTGCACACTACGTGGGCGTCACAACCTACTCTCTACTAGTATGGTTGTGACACTGAGCATAGCAAAAGCACATACCTGGAACTTCAGCGAAAGAAGGTTCACCGGTATGTGATTTTTATGATTGATGAAAAGAAAAAAGAGGTGGTGGTGGAAAAGACTGGGAGCCCAGCTGAGAGCTTTGATGATTTCACTGCTTCGTTGCCTGAGAATGACTATAGATATGCAGTTTTTGACTTTGATTTTGTGACTTCTGAGAACTACCAAAAGAGCAAAATCTTTTTCATTTCATGGTTAGTTATTTTAATTCATTTTAAAAGTATTTCCCGGGTTAGTTCAGTAATTTGACTTATTGTTTAGTTTTCTTCTTGTTCCTTTTATGTTTGTTATCAGGTTCAACCTCCAACTATTGGTACCTCTAGTATTAAAGGAGTATTGCATTTACTTCTTGGAACTTTCATTACTGTATCTGCAAGATTCTGCTTACTTTCATGTTCTTTAACCATCTCATTATATCAAGTATTTTTCTTTGTGTTAAACCTAAAGATCAGGTGATATTTCTAGCTTAGCTGGCATGAATTAAAAACACAAATGCCTTGTGGTATGGATGAACGGTGAAAATTTTGGGGAGCCGTCAAATACCTAACGTATTTGATCAACTTTCTTTCCGATATTGTTTCATGAAATTATTGTCTTGTTGTATAGTTAAGCGTTATATATGTCACTCTGCCTTTAACAACAGGGATTTAGGAAATTTATATACGAGGGTGGTTTTCTACTTATATTATCTGAGATTAGTAATTCCACTTGGTTGTTAAATTGCTCCATGAGTTTGCCCTGTTGTTGTAATAACATAATCAGTTGTTTTAGTTCCCGCCCTCTTGCTATTGCTTTGCTGTTGTACCAAGAAACCGTTCATTCATAACTATTCTTATTGTAATATTTTTGACCTGCAGTCTGGTTCTACAAGGCATTGGCAATTACCTGCCAATCTTTGACACTCTTTCCTCTAGGGGGACGCATCCAGTCTGTAGTTCCATACCTGATTTCTTACATTTTCTGTACACTAGCAGACATATTCAATGTTTTGATACTGTTATTATAGTTGTGCCGGCGTAGAAATAAAGTGGTGCGGTGGTTATGCTGACTGAGTGACTGTTTGATGCACTCTTGCTCAAGATGATCTACTCCAGCTCTTGTGATTTTTTGACGATTACTATCTTTGCAGGTCTCCATCTGTATCAAGGATCCGTTCCAAGATGCTTTATGCAACATCAAAGGACAGGTTTAGAAGGGAATTGGAGGGAATCCATTACGAGATTCAGGCAACTGACCCAACTGAAGATGGATATTGA

mRNA sequence

ATGCCTCCCCCTAAGCCGCTCGTCCAAACTCTTGACAGAACCCCAACTTCTAGGGTCGTGGCCCGGGGCCCCAACTGGCCCCCGTTGAGCTTGTCACCGACACCACTGACGTCGCCTTCGCTTTGCATTCTGCATATGCCTTCTCTAGGCATTCTTGAGCACATCCATATGCGAAAGAAGGTTCACCGGTATGTGATTTTTATGATTGATGAAAAGAAAAAAGAGGTGGTGGTGGAAAAGACTGGGAGCCCAGCTGAGAGCTTTGATGATTTCACTGCTTCGTTGCCTGAGAATGACTATAGATATGCAGTTTTTGACTTTGATTTTGTGACTTCTGAGAACTACCAAAAGAGCAAAATCTTTTTCATTTCATGGTTCAACCTCCAACTATTGGTACCTCTAGTATTAAAGGAGTATTGCATTTACTTCTTGGAACTTTCATTACTTCTGGTTCTACAAGGCATTGGCAATTACCTGCCAATCTTTGACACTCTTTCCTCTAGGGGGACGCATCCAGTCTGTAGTTCCATACCTGATTTCTTACATTTTCTGTCTCCATCTGTATCAAGGATCCGTTCCAAGATGCTTTATGCAACATCAAAGGACAGGTTTAGAAGGGAATTGGAGGGAATCCATTACGAGATTCAGGCAACTGACCCAACTGAAGATGGATATTGA

Coding sequence (CDS)

ATGCCTCCCCCTAAGCCGCTCGTCCAAACTCTTGACAGAACCCCAACTTCTAGGGTCGTGGCCCGGGGCCCCAACTGGCCCCCGTTGAGCTTGTCACCGACACCACTGACGTCGCCTTCGCTTTGCATTCTGCATATGCCTTCTCTAGGCATTCTTGAGCACATCCATATGCGAAAGAAGGTTCACCGGTATGTGATTTTTATGATTGATGAAAAGAAAAAAGAGGTGGTGGTGGAAAAGACTGGGAGCCCAGCTGAGAGCTTTGATGATTTCACTGCTTCGTTGCCTGAGAATGACTATAGATATGCAGTTTTTGACTTTGATTTTGTGACTTCTGAGAACTACCAAAAGAGCAAAATCTTTTTCATTTCATGGTTCAACCTCCAACTATTGGTACCTCTAGTATTAAAGGAGTATTGCATTTACTTCTTGGAACTTTCATTACTTCTGGTTCTACAAGGCATTGGCAATTACCTGCCAATCTTTGACACTCTTTCCTCTAGGGGGACGCATCCAGTCTGTAGTTCCATACCTGATTTCTTACATTTTCTGTCTCCATCTGTATCAAGGATCCGTTCCAAGATGCTTTATGCAACATCAAAGGACAGGTTTAGAAGGGAATTGGAGGGAATCCATTACGAGATTCAGGCAACTGACCCAACTGAAGATGGATATTGA

Protein sequence

MPPPKPLVQTLDRTPTSRVVARGPNWPPLSLSPTPLTSPSLCILHMPSLGILEHIHMRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQKSKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSIPDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTEDGY

Homology

[Close]

BLAST of Moc05g00930 vs. NCBI nr
Match: XP_022146448.1 (actin-depolymerizing factor-like isoform X2 [Momordica charantia])

HSP 1 Score: 193.4 bits (490), Expect = 2.2e-45
Identity = 112/183 (61.20%), Postives = 114/183 (62.30%), Query Frame = 0


Query: 49  LGILEHIH------MRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRY 108
           +G+ EH         RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRY
Sbjct: 1   MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRY 60

Query: 109 AVFDFDFVTSENYQKSKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIF 168
           AVFDFDFVTSENYQKSKIFFISW                                     
Sbjct: 61  AVFDFDFVTSENYQKSKIFFISW------------------------------------- 120

Query: 169 DTLSSRGTHPVCSSIPDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 226
                                 SPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE
Sbjct: 121 ----------------------SPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 124

[Close]

BLAST of Moc05g00930 vs. NCBI nr
Match: XP_022146440.1 (actin-depolymerizing factor-like isoform X1 [Momordica charantia])

HSP 1 Score: 193.0 bits (489), Expect = 2.8e-45
Identity = 109/168 (64.88%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 58  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 117
           RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK
Sbjct: 16  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 75

Query: 118 SKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSI 177
           SKIFFISW                                                    
Sbjct: 76  SKIFFISW---------------------------------------------------- 124

Query: 178 PDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTEDGY 226
                  SPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTEDGY
Sbjct: 136 -------SPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTEDGY 124

[Close]

BLAST of Moc05g00930 vs. NCBI nr
Match: RVW86811.1 (Actin-depolymerizing factor 11 [Vitis vinifera])

HSP 1 Score: 181.8 bits (460), Expect = 6.6e-42
Identity = 110/183 (60.11%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 49  LGILEHIH------MRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRY 108
           +G+ +H         RKKVHRYVIF IDEKKKEVVVEKTG PAES+DDFTASLPEND RY
Sbjct: 55  MGVADHCKATYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPENDCRY 114

Query: 109 AVFDFDFVTSENYQKSKIFFISW---FNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYL 168
           A++DFDFVTSEN QKSKIFFI+W    N QL  P  L   C+  +  S   ++       
Sbjct: 115 AIYDFDFVTSENCQKSKIFFIAWQWSNNFQLFDP-SLSFPCLQEMTFSCSCLISA----Q 174

Query: 169 PIFDTLSSRGTHPVCSSIPDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATD 223
            I   L+  G             +LSPSVSRIR+KMLYATSKDRFRRELEGIHYEIQATD
Sbjct: 175 LIASVLAGGGV------------YLSPSVSRIRAKMLYATSKDRFRRELEGIHYEIQATD 220

[Close]

BLAST of Moc05g00930 vs. NCBI nr
Match: RVW33367.1 (Actin-depolymerizing factor 11 [Vitis vinifera])

HSP 1 Score: 181.8 bits (460), Expect = 6.6e-42
Identity = 113/191 (59.16%), Postives = 126/191 (65.97%), Query Frame = 0


Query: 49  LGILEHIH------MRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRY 108
           +G+ +H         RKKVHRYVIF IDEKKKEVVVEKTG PAES+DDFTASLPEND RY
Sbjct: 81  MGVADHCKATYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPENDCRY 140

Query: 109 AVFDFDFVTSENYQKSKIFFISW---FNLQLLVPLV----LKEY---CIYFLELSLLL-V 168
           A++DFDFVTSEN QKSKIFFI+W    N QL  P +    L+E    C   +   L+  V
Sbjct: 141 AIYDFDFVTSENCQKSKIFFIAWQWSNNFQLFDPSLSFPCLQEMTFSCSCLISAQLIASV 200

Query: 169 LQGIGNYLPIFDTLSSRGTHPVCSSIPDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGI 223
           L G+G Y                         LSPSVSRIR+KMLYATSKDRFRRELEGI
Sbjct: 201 LAGVGVY-------------------------LSPSVSRIRAKMLYATSKDRFRRELEGI 246

[Close]

BLAST of Moc05g00930 vs. NCBI nr
Match: EXC01786.1 (Actin-depolymerizing factor [Morus notabilis])

HSP 1 Score: 178.7 bits (452), Expect = 5.5e-41
Identity = 105/167 (62.87%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 58  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 117
           RKKV RYVIF IDEKKKEV+VEKTG PAESFDDF ASLPEND RYAV+DFDFVTSEN QK
Sbjct: 16  RKKVFRYVIFKIDEKKKEVMVEKTGGPAESFDDFAASLPENDCRYAVYDFDFVTSENCQK 75

Query: 118 SKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPI--FDTLSSRGTHPVCS 177
           SKIFFI+     +  P  L    +YF+ L         G+ LP+  F  L       +  
Sbjct: 76  SKIFFIACKGKDVENPSELSSASLYFMPLD--------GSPLPVYFFPPL-------IFL 135

Query: 178 SIPDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 223
           + P  L   SPSVSRIR+KMLYATSKD+FRREL+GIHYEIQATDPTE
Sbjct: 136 TFPGVLLLRSPSVSRIRAKMLYATSKDKFRRELDGIHYEIQATDPTE 167

[Close]

BLAST of Moc05g00930 vs. ExPASy Swiss-Prot
Match: Q8SAG3 (Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.6e-38
Identity = 91/165 (55.15%), Postives = 99/165 (60.00%), Query Frame = 0


Query: 58  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 117
           RKKVHRYVIF IDEKKKEVVVEKTG PAESFD+F A+LPEND RYAV+DFDFVTSEN QK
Sbjct: 27  RKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQK 86

Query: 118 SKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSI 177
           SKIFFI+W                                                    
Sbjct: 87  SKIFFIAW---------------------------------------------------- 132

Query: 178 PDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 223
                  SP  SRIR+KMLYATSK+RFRREL+G+HYEIQATDPTE
Sbjct: 147 -------SPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTE 132

[Close]

BLAST of Moc05g00930 vs. ExPASy Swiss-Prot
Match: Q2QLT8 (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF11 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-34
Identity = 85/165 (51.52%), Postives = 96/165 (58.18%), Query Frame = 0


Query: 58  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 117
           RKK HRYVIF ID+K KEVVVEKTGS  ESFDDF  SLPE+D RYA++DFDFVT EN QK
Sbjct: 29  RKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQK 88

Query: 118 SKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSI 177
           SKIFF++W                                                    
Sbjct: 89  SKIFFVAW---------------------------------------------------- 134

Query: 178 PDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 223
                  SPSVSRIR+KMLYATSK+RFRREL+G+HYEIQATDP+E
Sbjct: 149 -------SPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSE 134

[Close]

BLAST of Moc05g00930 vs. ExPASy Swiss-Prot
Match: Q9ZSK2 (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.8e-34
Identity = 83/165 (50.30%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 58  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 117
           RKK HRYV+F IDE KKEVVVEKTG+P ES+DDF ASLP+ND RYAV+DFDFVTSEN QK
Sbjct: 30  RKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQK 89

Query: 118 SKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSI 177
           SKIFF +W                                                    
Sbjct: 90  SKIFFFAW---------------------------------------------------- 135

Query: 178 PDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 223
                  SPS S IR+K+LY+TSKD+  REL+GIHYEIQATDPTE
Sbjct: 150 -------SPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTE 135

[Close]

BLAST of Moc05g00930 vs. ExPASy Swiss-Prot
Match: Q9AY76 (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.9e-32
Identity = 80/164 (48.78%), Postives = 93/164 (56.71%), Query Frame = 0


Query: 59  KKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQKS 118
           KK  RYVIF I+EK+K+VVVEKTG+  ES+DDF ASLPEND RYA++DFDFVT EN QKS
Sbjct: 30  KKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKS 89

Query: 119 KIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSIP 178
           KIFFI+W                                                     
Sbjct: 90  KIFFIAW----------------------------------------------------- 134

Query: 179 DFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 223
                 SPS SRIR+KMLY+TSKDR ++EL+G HYEIQATDPTE
Sbjct: 150 ------SPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTE 134

[Close]

BLAST of Moc05g00930 vs. ExPASy Swiss-Prot
Match: Q337A5 (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-30
Identity = 73/165 (44.24%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 58  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 117
           R+KVHRYVIF ID++++E+VVEKTG+P ES+DDFTASLP +D RYAV+D DFV+ +N +K
Sbjct: 33  RRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRK 92

Query: 118 SKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSI 177
           SKIFFISW                                                    
Sbjct: 93  SKIFFISW---------------------------------------------------- 138

Query: 178 PDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 223
                  SPSVSRIR+K +YA S+++FR EL+G+H+EIQATDP +
Sbjct: 153 -------SPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDD 138

[Close]

BLAST of Moc05g00930 vs. ExPASy TrEMBL
Match: A0A6J1CYL7 (actin-depolymerizing factor-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015653 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45
Identity = 112/183 (61.20%), Postives = 114/183 (62.30%), Query Frame = 0


Query: 49  LGILEHIH------MRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRY 108
           +G+ EH         RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRY
Sbjct: 1   MGVAEHSKSTYLELQRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRY 60

Query: 109 AVFDFDFVTSENYQKSKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIF 168
           AVFDFDFVTSENYQKSKIFFISW                                     
Sbjct: 61  AVFDFDFVTSENYQKSKIFFISW------------------------------------- 120

Query: 169 DTLSSRGTHPVCSSIPDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 226
                                 SPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE
Sbjct: 121 ----------------------SPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 124

[Close]

BLAST of Moc05g00930 vs. ExPASy TrEMBL
Match: A0A6J1CX92 (actin-depolymerizing factor-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015653 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.4e-45
Identity = 109/168 (64.88%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 58  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 117
           RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK
Sbjct: 16  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 75

Query: 118 SKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSI 177
           SKIFFISW                                                    
Sbjct: 76  SKIFFISW---------------------------------------------------- 124

Query: 178 PDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTEDGY 226
                  SPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTEDGY
Sbjct: 136 -------SPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTEDGY 124

[Close]

BLAST of Moc05g00930 vs. ExPASy TrEMBL
Match: A0A438HQT0 (Actin-depolymerizing factor 11 OS=Vitis vinifera OX=29760 GN=ADF11_1 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.2e-42
Identity = 110/183 (60.11%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 49  LGILEHIH------MRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRY 108
           +G+ +H         RKKVHRYVIF IDEKKKEVVVEKTG PAES+DDFTASLPEND RY
Sbjct: 55  MGVADHCKATYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPENDCRY 114

Query: 109 AVFDFDFVTSENYQKSKIFFISW---FNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYL 168
           A++DFDFVTSEN QKSKIFFI+W    N QL  P  L   C+  +  S   ++       
Sbjct: 115 AIYDFDFVTSENCQKSKIFFIAWQWSNNFQLFDP-SLSFPCLQEMTFSCSCLISA----Q 174

Query: 169 PIFDTLSSRGTHPVCSSIPDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATD 223
            I   L+  G             +LSPSVSRIR+KMLYATSKDRFRRELEGIHYEIQATD
Sbjct: 175 LIASVLAGGGV------------YLSPSVSRIRAKMLYATSKDRFRRELEGIHYEIQATD 220

[Close]

BLAST of Moc05g00930 vs. ExPASy TrEMBL
Match: A0A438DD12 (Actin-depolymerizing factor 11 OS=Vitis vinifera OX=29760 GN=ADF11_0 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.2e-42
Identity = 113/191 (59.16%), Postives = 126/191 (65.97%), Query Frame = 0


Query: 49  LGILEHIH------MRKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRY 108
           +G+ +H         RKKVHRYVIF IDEKKKEVVVEKTG PAES+DDFTASLPEND RY
Sbjct: 81  MGVADHCKATYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDFTASLPENDCRY 140

Query: 109 AVFDFDFVTSENYQKSKIFFISW---FNLQLLVPLV----LKEY---CIYFLELSLLL-V 168
           A++DFDFVTSEN QKSKIFFI+W    N QL  P +    L+E    C   +   L+  V
Sbjct: 141 AIYDFDFVTSENCQKSKIFFIAWQWSNNFQLFDPSLSFPCLQEMTFSCSCLISAQLIASV 200

Query: 169 LQGIGNYLPIFDTLSSRGTHPVCSSIPDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGI 223
           L G+G Y                         LSPSVSRIR+KMLYATSKDRFRRELEGI
Sbjct: 201 LAGVGVY-------------------------LSPSVSRIRAKMLYATSKDRFRRELEGI 246

[Close]

BLAST of Moc05g00930 vs. ExPASy TrEMBL
Match: W9SE02 (Actin-depolymerizing factor OS=Morus notabilis OX=981085 GN=L484_021423 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.7e-41
Identity = 105/167 (62.87%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 58  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 117
           RKKV RYVIF IDEKKKEV+VEKTG PAESFDDF ASLPEND RYAV+DFDFVTSEN QK
Sbjct: 16  RKKVFRYVIFKIDEKKKEVMVEKTGGPAESFDDFAASLPENDCRYAVYDFDFVTSENCQK 75

Query: 118 SKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPI--FDTLSSRGTHPVCS 177
           SKIFFI+     +  P  L    +YF+ L         G+ LP+  F  L       +  
Sbjct: 76  SKIFFIACKGKDVENPSELSSASLYFMPLD--------GSPLPVYFFPPL-------IFL 135

Query: 178 SIPDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 223
           + P  L   SPSVSRIR+KMLYATSKD+FRREL+GIHYEIQATDPTE
Sbjct: 136 TFPGVLLLRSPSVSRIRAKMLYATSKDKFRRELDGIHYEIQATDPTE 167

[Close]

BLAST of Moc05g00930 vs. TAIR 10
Match: AT2G31200.1 (actin depolymerizing factor 6 )

HSP 1 Score: 145.6 bits (366), Expect = 4.8e-35
Identity = 83/165 (50.30%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 58  RKKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQK 117
           RKK HRYV+F IDE KKEVVVEKTG+P ES+DDF ASLP+ND RYAV+DFDFVTSEN QK
Sbjct: 30  RKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQK 89

Query: 118 SKIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSI 177
           SKIFF +W                                                    
Sbjct: 90  SKIFFFAW---------------------------------------------------- 135

Query: 178 PDFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 223
                  SPS S IR+K+LY+TSKD+  REL+GIHYEIQATDPTE
Sbjct: 150 -------SPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTE 135

[Close]

BLAST of Moc05g00930 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 122.9 bits (307), Expect = 3.4e-28
Identity = 66/164 (40.24%), Postives = 91/164 (55.49%), Query Frame = 0


Query: 59  KKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQKS 118
           K+ +R+++F IDEK ++V +EK G+P E++DDFT+S+P+++ RYAV+DFDF T +N QKS
Sbjct: 24  KRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKS 83

Query: 119 KIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSIP 178
           KIFFI+W                                                     
Sbjct: 84  KIFFIAW----------------------------------------------------- 128

Query: 179 DFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTE 223
                 SP  SR+RSKMLYA+SKDRF+RE+EGI  E+QATDP+E
Sbjct: 144 ------SPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSE 128

[Close]

BLAST of Moc05g00930 vs. TAIR 10
Match: AT4G34970.1 (actin depolymerizing factor 9 )

HSP 1 Score: 122.9 bits (307), Expect = 3.4e-28
Identity = 69/167 (41.32%), Postives = 88/167 (52.69%), Query Frame = 0


Query: 59  KKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQKS 118
           KKVHRYV++ ++EK ++V V+K G+  ES+DD  ASLPE+D RYAVFDFD+VT +N + S
Sbjct: 26  KKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMS 85

Query: 119 KIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSIP 178
           KIFFI+W                                                     
Sbjct: 86  KIFFITW----------------------------------------------------- 133

Query: 179 DFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTEDGY 226
                 SP  SRIR KM+YATSK   RR L+G+HYE+QATDPTE G+
Sbjct: 146 ------SPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGF 133

[Close]

BLAST of Moc05g00930 vs. TAIR 10
Match: AT2G16700.1 (actin depolymerizing factor 5 )

HSP 1 Score: 121.7 bits (304), Expect = 7.5e-28
Identity = 71/167 (42.51%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 59  KKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQKS 118
           KKVHRY++F I+EK ++V V+K G   ES+ D   SLP +D RYAVFDFDFVT +N +KS
Sbjct: 28  KKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKS 87

Query: 119 KIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSIP 178
           KIFFI+W                                                     
Sbjct: 88  KIFFIAW----------------------------------------------------- 135

Query: 179 DFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTEDGY 226
                 SP  S+IR+K+LYATSKD  RR LEGIHYE+QATDPTE G+
Sbjct: 148 ------SPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGF 135

[Close]

BLAST of Moc05g00930 vs. TAIR 10
Match: AT2G16700.2 (actin depolymerizing factor 5 )

HSP 1 Score: 121.7 bits (304), Expect = 7.5e-28
Identity = 71/167 (42.51%), Postives = 87/167 (52.10%), Query Frame = 0


Query: 59  KKVHRYVIFMIDEKKKEVVVEKTGSPAESFDDFTASLPENDYRYAVFDFDFVTSENYQKS 118
           KKVHRY++F I+EK ++V V+K G   ES+ D   SLP +D RYAVFDFDFVT +N +KS
Sbjct: 17  KKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKS 76

Query: 119 KIFFISWFNLQLLVPLVLKEYCIYFLELSLLLVLQGIGNYLPIFDTLSSRGTHPVCSSIP 178
           KIFFI+W                                                     
Sbjct: 77  KIFFIAW----------------------------------------------------- 124

Query: 179 DFLHFLSPSVSRIRSKMLYATSKDRFRRELEGIHYEIQATDPTEDGY 226
                 SP  S+IR+K+LYATSKD  RR LEGIHYE+QATDPTE G+
Sbjct: 137 ------SPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGF 124

The following BLAST results are available for this feature:

BLAST of Moc05g00930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146448.1	2.2e-45	61.20	actin-depolymerizing factor-like isoform X2 [Momordica charantia]	[more]
XP_022146440.1	2.8e-45	64.88	actin-depolymerizing factor-like isoform X1 [Momordica charantia]	[more]
RVW86811.1	6.6e-42	60.11	Actin-depolymerizing factor 11 [Vitis vinifera]	[more]
RVW33367.1	6.6e-42	59.16	Actin-depolymerizing factor 11 [Vitis vinifera]	[more]
EXC01786.1	5.5e-41	62.87	Actin-depolymerizing factor [Morus notabilis]	[more]

BLAST of Moc05g00930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8SAG3	4.6e-38	55.15	Actin-depolymerizing factor OS=Vitis vinifera OX=29760 PE=2 SV=1	[more]
Q2QLT8	1.4e-34	51.52	Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF11...	[more]
Q9ZSK2	6.8e-34	50.30	Actin-depolymerizing factor 6 OS=Arabidopsis thaliana OX=3702 GN=ADF6 PE=1 SV=1	[more]
Q9AY76	4.9e-32	48.78	Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF2 P...	[more]
Q337A5	4.6e-30	44.24	Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF10...	[more]

BLAST of Moc05g00930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYL7	1.1e-45	61.20	actin-depolymerizing factor-like isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1CX92	1.4e-45	64.88	actin-depolymerizing factor-like isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A438HQT0	3.2e-42	60.11	Actin-depolymerizing factor 11 OS=Vitis vinifera OX=29760 GN=ADF11_1 PE=4 SV=1	[more]
A0A438DD12	3.2e-42	59.16	Actin-depolymerizing factor 11 OS=Vitis vinifera OX=29760 GN=ADF11_0 PE=4 SV=1	[more]
W9SE02	2.7e-41	62.87	Actin-depolymerizing factor OS=Morus notabilis OX=981085 GN=L484_021423 PE=4 SV=...	[more]

BLAST of Moc05g00930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31200.1	4.8e-35	50.30	actin depolymerizing factor 6	[more]
AT4G00680.1	3.4e-28	40.24	actin depolymerizing factor 8	[more]
AT4G34970.1	3.4e-28	41.32	actin depolymerizing factor 9	[more]
AT2G16700.1	7.5e-28	42.51	actin depolymerizing factor 5	[more]
AT2G16700.2	7.5e-28	42.51	actin depolymerizing factor 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 46..224 e-value: 8.8E-16 score: 68.4
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 54..125 e-value: 7.7E-17 score: 61.2 coord: 182..222 e-value: 3.3E-8 score: 33.3
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 40..225 score: 16.866302
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 49..224 e-value: 2.8E-39 score: 136.3
None	No IPR available	PANTHER	PTHR11913:SF83	ACTIN-DEPOLYMERIZING FACTOR-LIKE	coord: 57..126 coord: 174..222
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 182..222
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 58..125
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 57..126 coord: 174..222
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 53..222 e-value: 3.33059E-35 score: 119.969

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g00930.1	Moc05g00930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0003779	actin binding