Moc05g00290 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc05g00290
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Protein transport protein Sec61 subunit beta
Location	chr5: 245666 .. 248374 (+)
RNA-Seq Expression	Moc05g00290
Synteny	Moc05g00290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGGGGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTCTCCATGTTATGGGGAAGTTGTACTTCGTACGAAGAGAAGCTTAGAAGGAATTTTTCTTCTCATTAGAAAACTTTTTCTGTCGCATACAAAACTTTTTCAGTGTTGTGTTGATTTTGGAATTTTGAACTAGATCGTGTTTGGTAAATTGGAGGCCTTGATATCCATACAAGAGGGTAATATCTTTTGATGAGATATCAACCATATGATCTTAAACTTACTTTGCAGTTAATATTTATCTATCTTGAGATATATGTTGCACAGATAGTTTTCTCCACAAGTAACAGAGACATTATTCCTGGTTGATTCTACTCTTTTATTTCAAACTTGTATTAAAGATAGATTTTGAACTCACGTGGGGTGAACTTATTTTTAAGCTTTGAAAGCACAATTGTCTAATAGAGTTACCAACCAAATATTTAGTTTATTCTAAAATAATATTAATTATTTTATTAACGATTATTATTTTATAATGTATTATATTATATTTTACATTTTTTTAATCTTAACAAAAAAATTAAATGTGCTTAAAAAATAAAACAGTTTTTCGAAATACCAAACAGCCCCAAATAACTCTCTTTTTTCTTAATTTATTATTTTCACACCCTCCACCTCTCTGACTCTCTCTATCTTGGCACAGGGGACGAGATGTTTTTTTCCCTCTTATTGGTAATTAAACCTTTTTTTTCCTCTAAATATAAGGACTAAATGGTAATTTAATTTTAATTTCTTTAAAAGAAAAATAGAAAACGCAAATGTCGTATTAAATATGACGTGGATAGCAGGTATTGGTTGAAAAGGTCAATTACAGTATACGCGTCAAAATCTATAAAATTGTGTTATGAACGCAAAAAGTTCTTCCTCAGATTACATTCGATTTTTTGGAGGCTGCTGATCCAACTCTTCAATTTCGCTCACCCAAGTTCGTCTTCGTTCCTCTCTCTCTGTAGTTTTTATATCCGCATCTTCTTTTGCATCTGCATGTTCTATAACCAGATCTTGTTCTCGATTCGGAAAACTTCTTCCATAGAATTAAACAATTTAGGGTTTGACTGTATTTTCTTTAATGGTCCTTTTTTTGTGTGAAAAATGTTGTTCCTGCCTTTTGTGTCTTCTAAATTTTGGATGATCGGCAGATCTAAACGTTGCTAGATATTAATTTAAAGAGGGAAATTAGTGTGAAGAAGTTTATAGGAAATTGCTCTCAAATCTGGGTTCTCTGCGCTTTGTTGTGTTCTTCTGGGTTACCTTGGGCTATTATTTTCGACTTATATTTTTGCTCTTCGACAAGCTTTGAATTTACAGAATAGACATCTAGAACAGAAATCCCTTTTTTAAGGTTCGATTGGCCCTTCGATCTAGATTTTCTCTTGAAAAACAACAGATCTCCCTCTCGACTAATTAGAATCTCCCTGCCCCCATTATTTCAATTTGTTTCGTCTCCTTTTTTATGCTGTTTGGCGTGAATATAGGGCGGATGTTATGACAAATTGGAACTTACAGCTTTCCAGTGTCTTTTGATATATTATTCTCAAATTGTTTTTCCTCATGTGAAATATTGGGTGTTCGCAATTTATGGGTTTCTGACTATCTGTGGAAGGGTTTGTTCTCTTCGATTTGCATATTTCTGCTTCTTAACTCATGCAGATCTAGGATTGGCCAGAAATTTATCTTCAAGACCAAAATGGGTGCAATGATCTTTTGATTTCATGCATAACTTTTTGCATATTGCATTAATGATTTGTAATTTTTCTTTCTTCCTTCGCGATTATGGAAAGCAAATGAGTTAGATGCAAATCATCAAAATTTTTATCTCAAGTTATGCAGTATGGTCTATTAATTTGTTTCATTTGTCTCATTTTGACGTTTGCTCAAATACTTTTAGTACTGGGAACTTTTTGTTACAAAAGCCCATATTCTTAGTCTCATTTTGAGGGTTGTTCGAATTTTTTAATTACTGGGAACTTTTTGTTACAAAGGTCCACATTCTTGATTTCGGGAGTTTTAAATTGTGATGGGTGCTGTACTTTGTATGACTCTCAGACATACGAAGTACAGCTATATATATATTTGATAGAATGTTATAATGAGGTATCCATATTTGTGATTTGAGGAATAAGTTCCATAATAAAACAAAAAAATAGGGAAGAAAATGAAAATTTAAAAGTCTAACTTTCATCTCGCCTGCAATGTATTATTTGATTCAGAAAGGTTCAGTAAAGGATGCGTTTAGTTTTCTTTTCATCTATTTTGATGATTCAGTCTAAACTTGGAAGTTCTAAGTTTTTTTCGCTCTTTATCATCACAGAATGGCGCTAGGTGGAGCAGCTCCCCAGAGAGGAAGTGCAGCAGCTACTGCAAGCATGCGCAGGAGAAGGACGACGAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGGCTCAAGATATCCCCTAACGTCGTTCTTGTCATGAGCATTGGTTTCATAGCTTTTGTTGCTATTCTCCATGTTATGGGTAAGCTGTACTTCGTGCGAAGGGAAGCTTAG

mRNA sequence

ATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGGGGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTCTCCATGTTATGGGGAAGTTAATGGCGCTAGGTGGAGCAGCTCCCCAGAGAGGAAGTGCAGCAGCTACTGCAAGCATGCGCAGGAGAAGGACGACGAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGGCTCAAGATATCCCCTAACGTCGTTCTTGTCATGAGCATTGGTTTCATAGCTTTTGTTGCTATTCTCCATGTTATGGGTAAGCTGTACTTCGTGCGAAGGGAAGCTTAG

Coding sequence (CDS)

ATGCGCAGGAGGAGATCGACGAGTAGTTCTGCTACATCTGGAGGGGCATCTGGATCGATGCTTCAGTTCTATACAGACGATGCTCCAGGACTGAGGATATCCCCAAATGTTGTTCTGGTCATGAGCATTGGTTTCATAGCTTTTGTTTCTATTCTCCATGTTATGGGGAAGTTAATGGCGCTAGGTGGAGCAGCTCCCCAGAGAGGAAGTGCAGCAGCTACTGCAAGCATGCGCAGGAGAAGGACGACGAGTTCTGGTACATCTGGAGGGGCAGCTGGAACAATGCTGCAATTTTACACGGATGATGCTCCTGGGCTCAAGATATCCCCTAACGTCGTTCTTGTCATGAGCATTGGTTTCATAGCTTTTGTTGCTATTCTCCATGTTATGGGTAAGCTGTACTTCGTGCGAAGGGAAGCTTAG

Protein sequence

MRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA

Homology

[Close]

BLAST of Moc05g00290 vs. NCBI nr
Match: PPS07961.1 (hypothetical protein GOBAR_AA12702 [Gossypium barbadense])

HSP 1 Score: 200.7 bits (509), Expect = 8.5e-48
Identity = 111/141 (78.72%), Postives = 125/141 (88.65%), Query Frame = 0


Query: 1   MRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLMA 60
           +RRRR+TS    SGGA+G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV++LH+MGK + 
Sbjct: 18  LRRRRTTSGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHIMGKFVQ 77

Query: 61  LG-GAAPQRGSAAATASMRRRRTTS-SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 120
           +  G AP RGSAAA AS+RRRRTTS  G SGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 78  MATGTAPPRGSAAAAASLRRRRTTSGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 137

Query: 121 GFIAFVAILHVMGKLYFVRRE 140
           GFIAFVA+LH+MGK  FVRR+
Sbjct: 138 GFIAFVAVLHIMGK--FVRRD 156

[Close]

BLAST of Moc05g00290 vs. NCBI nr
Match: KAG5607160.1 (hypothetical protein H5410_028652 [Solanum commersonii])

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-36
Identity = 103/174 (59.20%), Postives = 117/174 (67.24%), Query Frame = 0


Query: 1   MRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVM----- 60
           +RRR++  +S  +GGA G+MLQFYTDD+PGL+ISPNVVLVMSIGFIAFV+ILHVM     
Sbjct: 20  LRRRKTGGASGAAGGAGGTMLQFYTDDSPGLKISPNVVLVMSIGFIAFVAILHVMVCQKC 79

Query: 61  GKL----------------------------------MALGGAAPQRGSAAATASMRRRR 120
            KL                                  MALGG  PQRG+AAA A+  RRR
Sbjct: 80  PKLRVMNLLVIVMWRPPRIINQSFKVQLTSKPIKQTEMALGGGGPQRGTAAAAAANLRRR 139

Query: 121 TT--SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKL 134
            T  + G +GGA GTMLQFYTDD+PGLKISPNVVLVMSIGFIAFVAILHVMG L
Sbjct: 140 KTGGAGGAAGGAGGTMLQFYTDDSPGLKISPNVVLVMSIGFIAFVAILHVMGYL 193

[Close]

BLAST of Moc05g00290 vs. NCBI nr
Match: PWA78239.1 (protein transport protein Sec61 subunit beta [Artemisia annua])

HSP 1 Score: 151.8 bits (382), Expect = 4.5e-33
Identity = 99/184 (53.80%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 1   MRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVM--GKL 60
           +RRRR+  +   SGG +G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV++LHV+  G L
Sbjct: 20  LRRRRTGGTGGASGGTAGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVVVGGNL 79

Query: 61  ----------------------------------------------------MALGGAAP 120
                                                               MAL G AP
Sbjct: 80  VAMNIVGKGISTQDHLLFLLLLFDAQTKNVFTLCWNRWSRNIKRKALKTISRMALNGGAP 139

Query: 121 QRGSAAATASMRRRRTT--SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFV 129
           QRGSAAA A+  RRR T  + G SGG AG MLQFYTDDAPGLKISPNVVLVMSIGFIAFV
Sbjct: 140 QRGSAAAAAANLRRRRTGGTGGASGGTAGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFV 199

[Close]

BLAST of Moc05g00290 vs. NCBI nr
Match: XP_038875187.1 (protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida])

HSP 1 Score: 151.4 bits (381), Expect = 5.9e-33
Identity = 85/90 (94.44%), Postives = 86/90 (95.56%), Query Frame = 0


Query: 51  ILHVMGKLMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISP 110
           ILH +   MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISP
Sbjct: 13  ILHTI--RMALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISP 72

Query: 111 NVVLVMSIGFIAFVAILHVMGKLYFVRREA 141
           NVVLVMSIGFIAFVAILHVMGKLYFVRREA
Sbjct: 73  NVVLVMSIGFIAFVAILHVMGKLYFVRREA 100

[Close]

BLAST of Moc05g00290 vs. NCBI nr
Match: XP_022146520.1 (protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_022924769.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022924770.1 protein transport protein Sec61 subunit beta-like [Cucurbita moschata] >XP_022980768.1 protein transport protein Sec61 subunit beta-like [Cucurbita maxima] >XP_023526368.1 protein transport protein Sec61 subunit beta-like [Cucurbita pepo subsp. pepo] >XP_038875266.1 protein transport protein Sec61 subunit beta-like isoform X2 [Benincasa hispida] >KAG6582719.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020688.1 Protein transport protein Sec61 subunit beta, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.4 bits (381), Expect = 5.9e-33
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 59  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 118
           MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 119 GFIAFVAILHVMGKLYFVRREA 141
           GFIAFVAILHVMGKLYFVRREA
Sbjct: 61  GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Moc05g00290 vs. ExPASy Swiss-Prot
Match: P38389 (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=At2g45070 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.6e-27
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 61  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 120
           +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2   VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 121 SIGFIAFVAILHVMGKLYFVR 138
           SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62  SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Moc05g00290 vs. ExPASy Swiss-Prot
Match: A8I6P9 (Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=3055 GN=SEC61B PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.6e-09
Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 58  LMALGGAAPQRGSAAATASMRRRRTTSSGTSG--GAAGTMLQFYTDDAPGLKISPNVVLV 117
           L+A GG +       A  ++RRR    SG SG   A    + FYTDD PG K+SP VV+ 
Sbjct: 11  LVARGGRSSSNAPTGAAGALRRRPVRGSGGSGTTKAQQAAMNFYTDDTPGWKMSPVVVIT 70

Query: 118 MSIGFIAFVAILHVMGK 133
           MS+ FIAFV ILHV+GK
Sbjct: 71  MSLSFIAFVTILHVVGK 87

[Close]

BLAST of Moc05g00290 vs. ExPASy Swiss-Prot
Match: Q9HFC7 (Protein transport protein Sec61 subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SBH1 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 73  ATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGK 132
           A AS R   T S G +GG++ TML+ YTD++ GLK+ P VV+V+S+GFI  V  LH++ K
Sbjct: 26  AKASQRPTSTRSVG-AGGSSSTMLKLYTDESQGLKVDPVVVMVLSLGFIFSVVALHILAK 85

Query: 133 L 134
           +
Sbjct: 86  V 85

[Close]

BLAST of Moc05g00290 vs. ExPASy Swiss-Prot
Match: Q54YR4 (Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum OX=44689 GN=sec61b PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 1  MRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGK 58
          M+R  +  + AT      SM++FY++DA GL++ P  VL MS+ FIAFV ILH+MGK
Sbjct: 1  MKRPSTQRAPATVNKGGNSMMKFYSEDAIGLKVGPTAVLFMSLIFIAFVIILHIMGK 57

[Close]

BLAST of Moc05g00290 vs. ExPASy Swiss-Prot
Match: P60467 (Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 GN=SEC61B PE=1 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-05
Identity = 28/62 (45.16%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 1  MRRRRSTSSSATSGG-----ASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVM 58
          +R+R++ S    S G      +G M +FYT+D+PGL++ P  VLVMS+ FIA V +LH+ 
Sbjct: 31 VRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIW 90

[Close]

BLAST of Moc05g00290 vs. ExPASy TrEMBL
Match: A0A2P5XXD0 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12702 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.1e-48
Identity = 111/141 (78.72%), Postives = 125/141 (88.65%), Query Frame = 0


Query: 1   MRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVMGKLMA 60
           +RRRR+TS    SGGA+G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV++LH+MGK + 
Sbjct: 18  LRRRRTTSGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHIMGKFVQ 77

Query: 61  LG-GAAPQRGSAAATASMRRRRTTS-SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 120
           +  G AP RGSAAA AS+RRRRTTS  G SGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 78  MATGTAPPRGSAAAAASLRRRRTTSGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 137

Query: 121 GFIAFVAILHVMGKLYFVRRE 140
           GFIAFVA+LH+MGK  FVRR+
Sbjct: 138 GFIAFVAVLHIMGK--FVRRD 156

[Close]

BLAST of Moc05g00290 vs. ExPASy TrEMBL
Match: A0A2U1NXK1 (Protein transport protein Sec61 subunit beta OS=Artemisia annua OX=35608 GN=CTI12_AA216630 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-33
Identity = 99/184 (53.80%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 1   MRRRRSTSSSATSGGASGSMLQFYTDDAPGLRISPNVVLVMSIGFIAFVSILHVM--GKL 60
           +RRRR+  +   SGG +G+MLQFYTDDAPGL+ISPNVVLVMSIGFIAFV++LHV+  G L
Sbjct: 20  LRRRRTGGTGGASGGTAGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVVVGGNL 79

Query: 61  ----------------------------------------------------MALGGAAP 120
                                                               MAL G AP
Sbjct: 80  VAMNIVGKGISTQDHLLFLLLLFDAQTKNVFTLCWNRWSRNIKRKALKTISRMALNGGAP 139

Query: 121 QRGSAAATASMRRRRTT--SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFV 129
           QRGSAAA A+  RRR T  + G SGG AG MLQFYTDDAPGLKISPNVVLVMSIGFIAFV
Sbjct: 140 QRGSAAAAAANLRRRRTGGTGGASGGTAGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFV 199

[Close]

BLAST of Moc05g00290 vs. ExPASy TrEMBL
Match: A0A6J1EFZ9 (Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111432170 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.9e-33
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 59  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 118
           MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 119 GFIAFVAILHVMGKLYFVRREA 141
           GFIAFVAILHVMGKLYFVRREA
Sbjct: 61  GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Moc05g00290 vs. ExPASy TrEMBL
Match: A0A6J1J088 (Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111480059 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.9e-33
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 59  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 118
           MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 119 GFIAFVAILHVMGKLYFVRREA 141
           GFIAFVAILHVMGKLYFVRREA
Sbjct: 61  GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Moc05g00290 vs. ExPASy TrEMBL
Match: A0A6J1CXG1 (Protein transport protein Sec61 subunit beta OS=Momordica charantia OX=3673 GN=LOC111015719 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.9e-33
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 59  MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 118
           MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI
Sbjct: 1   MALGGAAPQRGSAAATASMRRRRTTSSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSI 60

Query: 119 GFIAFVAILHVMGKLYFVRREA 141
           GFIAFVAILHVMGKLYFVRREA
Sbjct: 61  GFIAFVAILHVMGKLYFVRREA 82

[Close]

BLAST of Moc05g00290 vs. TAIR 10
Match: AT2G45070.1 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 61  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 120
           +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2   VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 121 SIGFIAFVAILHVMGKLYFVR 138
           SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62  SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Moc05g00290 vs. TAIR 10
Match: AT2G45070.2 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 61  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 120
           +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2   VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 121 SIGFIAFVAILHVMGKLYFVR 138
           SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62  SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Moc05g00290 vs. TAIR 10
Match: AT2G45070.3 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 61  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 120
           +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2   VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 121 SIGFIAFVAILHVMGKLYFVR 138
           SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62  SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Moc05g00290 vs. TAIR 10
Match: AT2G45070.4 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-28
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 61  LGGAAPQRGSAAATASMRRRRTTS----SGTSGGAAGTMLQFYTDDAPGLKISPNVVLVM 120
           +G  APQRGSAAATASMRRR+ TS     G SGGAAG+MLQFYTDDAPGLKISPNVVL+M
Sbjct: 2   VGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIM 61

Query: 121 SIGFIAFVAILHVMGKLYFVR 138
           SIGFIAFVA+LHVMGKLYFV+
Sbjct: 62  SIGFIAFVAVLHVMGKLYFVK 82

[Close]

BLAST of Moc05g00290 vs. TAIR 10
Match: AT3G60540.1 (Preprotein translocase Sec, Sec61-beta subunit protein )

HSP 1 Score: 119.8 bits (299), Expect = 1.8e-27
Identity = 64/78 (82.05%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 61  LGGAAPQRGSAAATASMRRRRTT-SSGTSGGAAGTMLQFYTDDAPGLKISPNVVLVMSIG 120
           +GG APQRGSAAATASMRRR+    S ++GG AGTMLQFYTDDAPGLKISPNVVL+MSIG
Sbjct: 2   VGGGAPQRGSAAATASMRRRKPAGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIG 61

Query: 121 FIAFVAILHVMGKLYFVR 138
           FIAFVA+LHVMGKLYFV+
Sbjct: 62  FIAFVAVLHVMGKLYFVK 79

The following BLAST results are available for this feature:

BLAST of Moc05g00290 vs. NCBI nr


Match Name	E-value	Identity	Description
PPS07961.1	8.5e-48	78.72	hypothetical protein GOBAR_AA12702 [Gossypium barbadense]	[more]
KAG5607160.1	1.5e-36	59.20	hypothetical protein H5410_028652 [Solanum commersonii]	[more]
PWA78239.1	4.5e-33	53.80	protein transport protein Sec61 subunit beta [Artemisia annua]	[more]
XP_038875187.1	5.9e-33	94.44	protein transport protein Sec61 subunit beta-like isoform X1 [Benincasa hispida]	[more]
XP_022146520.1	5.9e-33	100.00	protein transport protein Sec61 subunit beta-like [Momordica charantia] >XP_0229...	[more]

BLAST of Moc05g00290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P38389	8.6e-27	81.48	Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana OX=3702 GN=...	[more]
A8I6P9	3.6e-09	49.35	Protein transport protein Sec61 subunit beta OS=Chlamydomonas reinhardtii OX=305...	[more]
Q9HFC7	1.7e-06	49.18	Protein transport protein Sec61 subunit beta OS=Yarrowia lipolytica (strain CLIB...	[more]
Q54YR4	2.2e-06	49.12	Protein transport protein Sec61 subunit beta OS=Dictyostelium discoideum OX=4468...	[more]
P60467	2.4e-05	45.16	Protein transport protein Sec61 subunit beta OS=Canis lupus familiaris OX=9615 G...	[more]

BLAST of Moc05g00290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5XXD0	4.1e-48	78.72	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA12702 PE=3 SV...	[more]
A0A2U1NXK1	2.2e-33	53.80	Protein transport protein Sec61 subunit beta OS=Artemisia annua OX=35608 GN=CTI1...	[more]
A0A6J1EFZ9	2.9e-33	100.00	Protein transport protein Sec61 subunit beta OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J088	2.9e-33	100.00	Protein transport protein Sec61 subunit beta OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1CXG1	2.9e-33	100.00	Protein transport protein Sec61 subunit beta OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Moc05g00290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45070.1	6.1e-28	81.48	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.2	6.1e-28	81.48	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.3	6.1e-28	81.48	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT2G45070.4	6.1e-28	81.48	Preprotein translocase Sec, Sec61-beta subunit protein	[more]
AT3G60540.1	1.8e-27	82.05	Preprotein translocase Sec, Sec61-beta subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016482	Protein transport protein SecG/Sec61-beta/Sbh	PFAM	PF03911	Sec61_beta	coord: 92..131 e-value: 7.0E-18 score: 64.4 coord: 17..56 e-value: 4.6E-17 score: 61.8
IPR030671	Protein transport Sec61-beta/Sbh	PANTHER	PTHR13509	SEC61 SUBUNIT BETA	coord: 59..139
IPR030671	Protein transport Sec61-beta/Sbh	PANTHER	PTHR13509	SEC61 SUBUNIT BETA	coord: 1..59
None	No IPR available	PANTHER	PTHR13509:SF17	PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA	coord: 1..59 coord: 59..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc05g00290.1	Moc05g00290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031204	posttranslational protein targeting to membrane, translocation
biological_process	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005784	Sec61 translocon complex