Moc04g39640 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g39640
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	gibberellin-regulated protein 9
Location	chr4: 29413553 .. 29414520 (+)
RNA-Seq Expression	Moc04g39640
Synteny	Moc04g39640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCAATCAGTTTCCTTTTCATTCTCCTTCTCCTTCTATTTCTCCTCCAGGTATTGTATACATATTACATATGATTTTAGATTTCACCTTTTTTTTTTCAGTAACCAAAATTAACAAGTTACATTTAATGTTAATTTTTCTTTTTCTTTCTGCATTTTCTTCTTTTCTATTGTATTGCTGCAGGCTTTATCAGAGGCTTCTCCCTCTTACAGTACTGTGAGTGTCCTCCATATATCCTCTCTCTTCAAGTATTGGAATTGGGAAATTTTGGGATTTTATTGGATTCGCTAATGCTGTTGAAAATAACTGCTTAAAAACTTAAACTTGTCTCTAGTATTGATTTAAAACTCATGTGCAAGAGAAATATTGAGCATAAGTTCGAGGGATGTTTGGTGCTCGTGGTTATAATAAAGCTATTTAAATTGTGCATAGTTTATGTAATTCATGTTCAATATGTGAATAACCAATCTAGTGAAACACTATAAAAATTAACGTTTTTTCTGATGCTACAAAATGTCAAGGAAAATTTTGAAAATAGTCGAGAGAGATATTTTGTCTGACTACTTTCTGTACGTCGGGAAAGCTTATAATTCTTGTAGTGAAATATGAATATTGACCTTGGATTCAGGTGAATAAAGGGAGTAACAGGGTAGCTGTGGACAAAAAACATCAGCAAAGTCCAAAAATAAGTAAGTCGCCATGCAAGTTTCCAATATAATGATAAAATTGAAGAAAAATGTTAAAGAAAAGTGATTAATGGTTGAATTTGGTTGGATTATTAGATTGCAAGTATGCGTGCTCAAGGCGATGCATGAAGGCGTCGAGAAAGAAAATATGTATGCGCGCGTGTGGAAGTTGCTGCAGCCGATGCCACTGCGTCCCGCCCGGCACGTACGGCAACCACCAGCTCTGCCCTTGCTATGCTCGCCTCAAGACACACGCCAACAAGCCCAAGTGCCCCTAA

mRNA sequence

ATGAAGCCAATCAGTTTCCTTTTCATTCTCCTTCTCCTTCTATTTCTCCTCCAGGCTTTATCAGAGGCTTCTCCCTCTTACAGTACTGTGAATAAAGGGAGTAACAGGGTAGCTGTGGACAAAAAACATCAGCAAAGTCCAAAAATAAATTGCAAGTATGCGTGCTCAAGGCGATGCATGAAGGCGTCGAGAAAGAAAATATGTATGCGCGCGTGTGGAAGTTGCTGCAGCCGATGCCACTGCGTCCCGCCCGGCACGTACGGCAACCACCAGCTCTGCCCTTGCTATGCTCGCCTCAAGACACACGCCAACAAGCCCAAGTGCCCCTAA

Coding sequence (CDS)

ATGAAGCCAATCAGTTTCCTTTTCATTCTCCTTCTCCTTCTATTTCTCCTCCAGGCTTTATCAGAGGCTTCTCCCTCTTACAGTACTGTGAATAAAGGGAGTAACAGGGTAGCTGTGGACAAAAAACATCAGCAAAGTCCAAAAATAAATTGCAAGTATGCGTGCTCAAGGCGATGCATGAAGGCGTCGAGAAAGAAAATATGTATGCGCGCGTGTGGAAGTTGCTGCAGCCGATGCCACTGCGTCCCGCCCGGCACGTACGGCAACCACCAGCTCTGCCCTTGCTATGCTCGCCTCAAGACACACGCCAACAAGCCCAAGTGCCCCTAA

Protein sequence

MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP

Homology

[Close]

BLAST of Moc04g39640 vs. NCBI nr
Match: XP_022152524.1 (gibberellin-regulated protein 9 [Momordica charantia])

HSP 1 Score: 225.3 bits (573), Expect = 2.5e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60
           MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM
Sbjct: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60

Query: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
Sbjct: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 109

[Close]

BLAST of Moc04g39640 vs. NCBI nr
Match: XP_022993114.1 (gibberellin-regulated protein 9-like [Cucurbita maxima])

HSP 1 Score: 168.3 bits (425), Expect = 3.6e-38
Identity = 82/109 (75.23%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60
           MKP+S L   +LLL  LQ LSEAS   + VN+G+N  A+DKKH  SPKINCKYACSRRCM
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEAS---TNVNEGTNTAALDKKHIYSPKINCKYACSRRCM 80

Query: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           K  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH NK KCP
Sbjct: 81  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNKLKCP 126

[Close]

BLAST of Moc04g39640 vs. NCBI nr
Match: XP_022938854.1 (gibberellin-regulated protein 9 [Cucurbita moschata] >KAG6578328.1 Gibberellin-regulated protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 80/109 (73.39%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60
           MKP+S L   +LLL  LQ LSEA   ++ VN+G+N  A+DKKH  SPKINCKYACSRRCM
Sbjct: 1   MKPLSVLCTFVLLLLFLQGLSEA---FTNVNEGTNTAALDKKHIYSPKINCKYACSRRCM 60

Query: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           K  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH N+ KCP
Sbjct: 61  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106

[Close]

BLAST of Moc04g39640 vs. NCBI nr
Match: XP_023550961.1 (gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164.9 bits (416), Expect = 4.0e-37
Identity = 79/109 (72.48%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60
           MKP+S L   +LLL  LQ LSEA   ++ VN+G+N  A++KKH  SPKINCKYACSRRCM
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEA---FTNVNEGTNTTALNKKHIYSPKINCKYACSRRCM 80

Query: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           K  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH N+ KCP
Sbjct: 81  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 126

[Close]

BLAST of Moc04g39640 vs. NCBI nr
Match: XP_038885058.1 (gibberellin-regulated protein 9-like [Benincasa hispida])

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-35
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60
           MKP+S L I ++L  LLQ  SEA   ++TV++G+N VA+ KK+   PKINCK  CSRRC 
Sbjct: 1   MKPLSLLCIFIILSILLQGFSEA---FTTVDEGTNTVALTKKYHYHPKINCKRECSRRCS 60

Query: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           K  RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARLKTH NKPKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLKTHGNKPKCP 106

[Close]

BLAST of Moc04g39640 vs. ExPASy Swiss-Prot
Match: Q8GWK5 (Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.1e-24
Identity = 55/116 (47.41%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEAS-------PSYSTVNKGSNRVAVDKKHQQSPKINCKY 60
           M  ++F+ +++  L L Q L+E S        S S  N  +   A  + +   P+INC +
Sbjct: 4   MNVVAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGH 63

Query: 61  ACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           AC+RRC K SRKK+C RACGSCC++C CVPPGT GN   CPCYA ++TH NK KCP
Sbjct: 64  ACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Moc04g39640 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 48/100 (48.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 10  LLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCMKASRKKICM 69
           LLL L LL+ +        T N      A+ +      KI+C  AC+ RC  +SR ++C 
Sbjct: 11  LLLSLLLLEQVQSIQTDQVTSN------AISEAAYSYKKIDCGGACAARCRLSSRPRLCN 70

Query: 70  RACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           RACG+CC+RC+CVPPGT GN + CPCYA L TH NK KCP
Sbjct: 71  RACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of Moc04g39640 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.3e-18
Identity = 39/62 (62.90%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 48  KINCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPK 107
           KI+C   C  RC K+SR K+C+RAC SCCSRC+CVPPGT GN  LCPCYA + TH  + K
Sbjct: 38  KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLK 97

Query: 108 CP 110
           CP
Sbjct: 98  CP 99

[Close]

BLAST of Moc04g39640 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.8e-17
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 48  KINCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPK 107
           KI+C   C  RC K+SR  +C+RAC SCC RC+CVPPGT GNH LCPCYA + T   + K
Sbjct: 38  KIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLK 97

Query: 108 CP 110
           CP
Sbjct: 98  CP 99

[Close]

BLAST of Moc04g39640 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 2.4e-16
Identity = 49/106 (46.23%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 4   ISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCMKAS 63
           I+ L I LL+L L+QA  E S                KK+  + KI+C  AC  RC  + 
Sbjct: 8   IASLLISLLVLQLVQADVENS---------------QKKNGYAKKIDCGSACVARCRLSR 67

Query: 64  RKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           R ++C RACG+CC RC+CVPPGTYGN+  C CYA L TH  + KCP
Sbjct: 68  RPRLCHRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of Moc04g39640 vs. ExPASy TrEMBL
Match: A0A6J1DG94 (gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60
           MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM
Sbjct: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60

Query: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP
Sbjct: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 109

[Close]

BLAST of Moc04g39640 vs. ExPASy TrEMBL
Match: A0A6J1JZB3 (gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.8e-38
Identity = 82/109 (75.23%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60
           MKP+S L   +LLL  LQ LSEAS   + VN+G+N  A+DKKH  SPKINCKYACSRRCM
Sbjct: 21  MKPLSVLCTFVLLLLFLQGLSEAS---TNVNEGTNTAALDKKHIYSPKINCKYACSRRCM 80

Query: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           K  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH NK KCP
Sbjct: 81  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNKLKCP 126

[Close]

BLAST of Moc04g39640 vs. ExPASy TrEMBL
Match: A0A6J1FFC2 (gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.1e-38
Identity = 80/109 (73.39%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60
           MKP+S L   +LLL  LQ LSEA   ++ VN+G+N  A+DKKH  SPKINCKYACSRRCM
Sbjct: 1   MKPLSVLCTFVLLLLFLQGLSEA---FTNVNEGTNTAALDKKHIYSPKINCKYACSRRCM 60

Query: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           K  RKKICMRACGSCCSRCHCVPPGTYGNHQ CPCYARL+TH N+ KCP
Sbjct: 61  KVRRKKICMRACGSCCSRCHCVPPGTYGNHQACPCYARLRTHGNRLKCP 106

[Close]

BLAST of Moc04g39640 vs. ExPASy TrEMBL
Match: A0A0A0LMS4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35
Identity = 76/109 (69.72%), Postives = 87/109 (79.82%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60
           MKP+S L I ++L FLLQ  SEA    +TV++G+N VA+ KK+   PKINCK  CSRRC 
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEA---IATVDEGTNTVALTKKYHYQPKINCKSECSRRCS 60

Query: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           K  RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARL+TH NKPKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Moc04g39640 vs. ExPASy TrEMBL
Match: A0A1S3B2G6 (gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.4e-35
Identity = 76/109 (69.72%), Postives = 86/109 (78.90%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEASPSYSTVNKGSNRVAVDKKHQQSPKINCKYACSRRCM 60
           MKP+S L I ++L FLLQ  SEA    +TV+ G+N VA+ KK+   PKINCK  CSRRC 
Sbjct: 1   MKPLSLLCIFIILSFLLQGFSEA---ITTVDAGTNTVALSKKYHYQPKINCKSECSRRCS 60

Query: 61  KASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           K  RKKICMRACG+CCSRCHCVPPGTYGNHQ CPCYARL+TH NKPKCP
Sbjct: 61  KVFRKKICMRACGTCCSRCHCVPPGTYGNHQACPCYARLRTHGNKPKCP 106

[Close]

BLAST of Moc04g39640 vs. TAIR 10
Match: AT1G22690.1 (Gibberellin-regulated family protein )

HSP 1 Score: 112.1 bits (279), Expect = 2.9e-25
Identity = 55/116 (47.41%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEAS-------PSYSTVNKGSNRVAVDKKHQQSPKINCKY 60
           M  ++F+ +++  L L Q L+E S        S S  N  +   A  + +   P+INC +
Sbjct: 4   MNVVAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGH 63

Query: 61  ACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           AC+RRC K SRKK+C RACGSCC++C CVPPGT GN   CPCYA ++TH NK KCP
Sbjct: 64  ACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Moc04g39640 vs. TAIR 10
Match: AT1G22690.2 (Gibberellin-regulated family protein )

HSP 1 Score: 112.1 bits (279), Expect = 2.9e-25
Identity = 55/116 (47.41%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEAS-------PSYSTVNKGSNRVAVDKKHQQSPKINCKY 60
           M  ++F+ +++  L L Q L+E S        S S  N  +   A  + +   P+INC +
Sbjct: 4   MNVVAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGH 63

Query: 61  ACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           AC+RRC K SRKK+C RACGSCC++C CVPPGT GN   CPCYA ++TH NK KCP
Sbjct: 64  ACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Moc04g39640 vs. TAIR 10
Match: AT1G22690.3 (Gibberellin-regulated family protein )

HSP 1 Score: 112.1 bits (279), Expect = 2.9e-25
Identity = 55/116 (47.41%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 1   MKPISFLFILLLLLFLLQALSEAS-------PSYSTVNKGSNRVAVDKKHQQSPKINCKY 60
           M  ++F+ +++  L L Q L+E S        S S  N  +   A  + +   P+INC +
Sbjct: 4   MNVVAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGH 63

Query: 61  ACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPKCP 110
           AC+RRC K SRKK+C RACGSCC++C CVPPGT GN   CPCYA ++TH NK KCP
Sbjct: 64  ACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119

[Close]

BLAST of Moc04g39640 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 92.0 bits (227), Expect = 3.1e-19
Identity = 39/62 (62.90%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 48  KINCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPK 107
           KI+C   C  RC K+SR K+C+RAC SCCSRC+CVPPGT GN  LCPCYA + TH  + K
Sbjct: 38  KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLK 97

Query: 108 CP 110
           CP
Sbjct: 98  CP 99

[Close]

BLAST of Moc04g39640 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 88.6 bits (218), Expect = 3.4e-18
Identity = 37/62 (59.68%), Postives = 44/62 (70.97%), Query Frame = 0


Query: 48  KINCKYACSRRCMKASRKKICMRACGSCCSRCHCVPPGTYGNHQLCPCYARLKTHANKPK 107
           KI+C   C  RC K+SR  +C+RAC SCC RC+CVPPGT GNH LCPCYA + T   + K
Sbjct: 38  KIDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLK 97

Query: 108 CP 110
           CP
Sbjct: 98  CP 99

The following BLAST results are available for this feature:

BLAST of Moc04g39640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152524.1	2.5e-55	100.00	gibberellin-regulated protein 9 [Momordica charantia]	[more]
XP_022993114.1	3.6e-38	75.23	gibberellin-regulated protein 9-like [Cucurbita maxima]	[more]
XP_022938854.1	1.1e-37	73.39	gibberellin-regulated protein 9 [Cucurbita moschata] >KAG6578328.1 Gibberellin-r...	[more]
XP_023550961.1	4.0e-37	72.48	gibberellin-regulated protein 9-like [Cucurbita pepo subsp. pepo]	[more]
XP_038885058.1	2.2e-35	69.72	gibberellin-regulated protein 9-like [Benincasa hispida]	[more]

BLAST of Moc04g39640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK5	4.1e-24	47.41	Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV...	[more]
Q93X17	1.5e-18	48.00	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46688	4.3e-18	62.90	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]
P46687	4.8e-17	59.68	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]
P46689	2.4e-16	46.23	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]

BLAST of Moc04g39640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DG94	1.2e-55	100.00	gibberellin-regulated protein 9 OS=Momordica charantia OX=3673 GN=LOC111020228 P...	[more]
A0A6J1JZB3	1.8e-38	75.23	gibberellin-regulated protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489231...	[more]
A0A6J1FFC2	5.1e-38	73.39	gibberellin-regulated protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111444936 PE...	[more]
A0A0A0LMS4	1.1e-35	69.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G402110 PE=3 SV=1	[more]
A0A1S3B2G6	1.4e-35	69.72	gibberellin-regulated protein 9 OS=Cucumis melo OX=3656 GN=LOC103485417 PE=3 SV=...	[more]

BLAST of Moc04g39640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22690.1	2.9e-25	47.41	Gibberellin-regulated family protein	[more]
AT1G22690.2	2.9e-25	47.41	Gibberellin-regulated family protein	[more]
AT1G22690.3	2.9e-25	47.41	Gibberellin-regulated family protein	[more]
AT4G09610.1	3.1e-19	62.90	GAST1 protein homolog 2	[more]
AT4G09600.1	3.4e-18	59.68	GAST1 protein homolog 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 50..109 e-value: 1.2E-21 score: 76.6
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 13..109
None	No IPR available	PANTHER	PTHR23201:SF20	GIBBERELLIN-REGULATED PROTEIN 9	coord: 13..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g39640.1	Moc04g39640.1	mRNA