Moc04g38720 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g38720
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	E3 ubiquitin-protein ligase SDIR1
Location	chr4: 28900685 .. 28903985 (+)
RNA-Seq Expression	Moc04g38720
Synteny	Moc04g38720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAAGCAGGCGCAAGAATTTGACGAGAGGAATACTACGTCGTTTTGTGCATTCAACAGTTGCAGAGCGGACAGGTCACAACTCACAAGCAACTCAACGCGTCCGAGTCACCTCGACTCGCTCCCTCATCTTCTCCATCGACGGAGCCGTGTCTCCCATTTCTACATAATTAAGCATCCTATCTTTTCGATTCAAAGCAATCCCTTGTCGCTTTTGGACCTACACTACAAACAAAATCAACCCCATTGACTCGATTCTGTTCTGTAAGTCTCTACCCCCTTCTCCCATCATCTGATTTCTCTCATCAAGGCTCTTTCTAGGTTCCGTTATTTGCTGATCGCCGTTTTCTTTTGCCTTCTTTTATTGGGATTCTTTACTGAAGTGATTATTGATCATTTGGATTTCACTTGTTTAGCTGTCATCGTTGTACGATTTTTGTGTCGGTCTGATTCTGTTTACTGATTAGAGTTTTCGCTCTTTGGAAGTTGGTTGGGAATGTTGAGAATTGAGAAATTTAGGAGGGAAAAAGAATTAAAATCGATCTGATACAATCGACCGACAGCTCTGGCTTTTAAGTTGGGCATTTGCATTTGAGTAGAGACCTCAATCTTGCACTTGAGTGCAGTAATCTTACAGTCTTTTGGTGCCCTTTTGATTGGATGCCCAGATGAAGGGGAAACGTCTTGTGTACTTCTGGATATCTTTTCAGACAATGCAGTTCCATTTCTTAAAGGGTTTTCAGGATTAATGTGTTGTCGTCTATGTTGTCTGGAAGAATCAATCAATTTGTGCTAGCTTTTTTTAGCAGATGATTAGCTCATGAATGTGGCTAATGCATCGAATTTTAAGACTAAGATGACAATGGACAATTACTCGTTGAATTTCACGTGTATTGGATAAACCGTGGTGTACGAATGCGTCACTTTTAACTCTCTGAAATTATTCATGATTATATTTTTGTTGAGGGGTTTATTTAGGCATTAAATTTATAGGGTTAAGGGATTTCAAAACTTAGGCCACGAGTTTTTTATTCTTCAAATTTGCTTCTTATGTTATTTATTTGCTGAATAATCCATTTATTCCCGAGGGCTGAGAAAGATGAATGATGGGTTAGTTGTAGTAAGGAGATGCGGGCACTTTCAGTTTATATCTATTTAGATATTGGAGCCTCTTTCTTTTATTTTGGATTCTGCAGATTATTACCATAAGATTTTGGATTCTGTAGATTCATATTTCCCGAGTTCAACTAACTGACGCAGCTACTTCAGACATGAGTTTTGTTTTCCGTGGAACAAGAGTGCCAGATATAGAAAATGGTCTATCTGGATTTATACCCGAGCGACGTGCAATGGTATGCTTGATATTTAACTGAATTGACTTGTTCACTGCCAATGCTTGCAAATTTTAGATATTGCATTATATATATTTCTAATTATCTCAAGATTTTTCTTGAAAATGTTTCTTTTTCTTCTCCCAATCAGCGGGTCCATGCAGCACGGCCTGTTAACTCAAACTCACTTGCCTTTCTTGTCACAGGTACCATTTCACCTCTGCTTAGAACTGGTGTCTACTTTCTGTGATAATTTTTATCTATTCCATTATTTTTAACTCTTTGGCTTTGTTGCAGTTCTGTTGTTATTCATGATATTAAACTCTCACCAGATGTCGCCAAACTTTCTAGTGAGTTCCATACTTCACAATGTGGGTGTCTTGTAGACTAGTTTTACTCTTACCCTTGGTGCAAAACTTGACATTTTCTTCTTCTGAAAATGCATATTTAGCTCTGGCTTGTGCTTGGTGTCTTCTTGATGGCTACAACATTAAGGATGTACGCAACGTGTCAACAACTTCAGGCTCAAGCCCAAGCTCGAGCTATGGCAGCCAGTGGCCTTCTTGGTCACACTGAATTGAGGCTACATATGCCACCATCAATAGCACTTGCAACCAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATCGTGAATTTGATGATTTAGGTATGGTTCAAATCTATGCAATGCAAGTTCTTAGAATTATCAAAGCTGTAGGTGGGTATTCAAATAAAGTGGAGCACCTTGCTATCATGAAAACGCCAGCTCCACACATCCCCTCCCCCCCCCCCCCCCCCCAAAATTTTTTTGTGTGTGGTTGGGGTCATTTAAACTTGATTCGTGGCAAATATTGGGAAATTCTATAAATCAGACTTCTGTGACAAGATTCTGACATGATAAGCTTGCCATAATTTTTATATTGTGAATTGTCGAAAAGCAAATACCATGAACATGTGTTTGATATAATATTTCCAGTTGTATAAATTTGTTATGTACCAAGGTTCTTATATTATTCTTGTCGATAATACCATGTTAACATTTTGTTTAACTTCCCTATCAAAAACATTTTGTTTAACTTCAGACTATGAGACTTTGAGAGCATTGGATTCTGATAATGTTCCAACAACACCTTCTATGAGTGAGGAACAAATAAACGCTCTTCCTGTTCATAAATACAAGGTTTCTGGTCCTCAAAGGTAATCAATCCTGTATTCTACATCCCATAATTATAGGATAACTGTAGCTTTATTTTTAAAATTTTTGCTTGCAATCCACATTTTCTCCGCTGAAAGATTTTTTTCCAATGATGAAATCCGTACTCTTCAGCTTATCAAAAACCTAGCTTAGGTTCTTTAATTGTATGCAGCGACTCCGCTATGAATCAACAAGCTTCATCTTCTGAATCTAATGAGGTGAGGCATCAGACTCTTTTTCTTCCCTGCTTGTTTGATACTCTTTAAGTCTTATGTTGACCTGAATGGTGTGTATAAAGACAATAATTACTCCTTTTAGAAGAAAATGTAATGTAGCATTTTCTGGCTTCTTATATGTGTGACACCCTACTCATTAATTATCAATTTTGAAGTAAATGTTCTAAAATGTGATTGCAGAAGAGGCAAGATTCTGTTAGTGCAGTTGGCGGTACTAAGACCTTAGAGGATGAACTGACTTGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAGCTCATACGTAGTTTGCCATGCTTGCATCAGGTTTATCTCTATCTCTTTGCCAAGTTGCCGATATTTCATCAAAAAATTCACGTTGGTTTGTTTCAATTTTCTTATAAATGACTTCCGTCTTGTAGTTCCATACAAACTGCATCGATCCATGGCTGCGACAGCAGGGAACATGCCCTGTTTGTAAATTCAGAGCGGTGACCGGGTGGTCAGAACACGGGCATGGGGAAACCGATGCTTATATGGTTTAA

mRNA sequence

ATGCAAAAGCAGGCGCAAGAATTTGACGAGAGGAATACTACGTCGTTTTGTGCATTCAACAGTTGCAGAGCGGACAGGTTCCGTTATTTGCTGATCGCCGTTTTCTTTTGCCTTCTTTTATTGGGATTCTTTACTGAAGTGATTATTGATCATTTGGATTTCACTTGTTTAGCTGTCATCGTTATTCATATTTCCCGAGTTCAACTAACTGACGCAGCTACTTCAGACATGAGTTTTGTTTTCCGTGGAACAAGAGTGCCAGATATAGAAAATGGTCTATCTGGATTTATACCCGAGCGACGTGCAATGCGGGTCCATGCAGCACGGCCTGTTAACTCAAACTCACTTGCCTTTCTTGTCACAGTTCTGTTGTTATTCATGATATTAAACTCTCACCAGATGTCGCCAAACTTTCTACTCTGGCTTGTGCTTGGTGTCTTCTTGATGGCTACAACATTAAGGATGTACGCAACGTGTCAACAACTTCAGGCTCAAGCCCAAGCTCGAGCTATGGCAGCCAGTGGCCTTCTTGGTCACACTGAATTGAGGCTACATATGCCACCATCAATAGCACTTGCAACCAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATCGTGAATTTGATGATTTAGACTATGAGACTTTGAGAGCATTGGATTCTGATAATGTTCCAACAACACCTTCTATGAGTGAGGAACAAATAAACGCTCTTCCTGTTCATAAATACAAGGTTTCTGGTCCTCAAAGCGACTCCGCTATGAATCAACAAGCTTCATCTTCTGAATCTAATGAGAAGAGGCAAGATTCTGTTAGTGCAGTTGGCGGTACTAAGACCTTAGAGGATGAACTGACTTGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAGCTCATACGTAGTTTGCCATGCTTGCATCAGTTCCATACAAACTGCATCGATCCATGGCTGCGACAGCAGGGAACATGCCCTGTTTGTAAATTCAGAGCGGTGACCGGGTGGTCAGAACACGGGCATGGGGAAACCGATGCTTATATGGTTTAA

Coding sequence (CDS)

ATGCAAAAGCAGGCGCAAGAATTTGACGAGAGGAATACTACGTCGTTTTGTGCATTCAACAGTTGCAGAGCGGACAGGTTCCGTTATTTGCTGATCGCCGTTTTCTTTTGCCTTCTTTTATTGGGATTCTTTACTGAAGTGATTATTGATCATTTGGATTTCACTTGTTTAGCTGTCATCGTTATTCATATTTCCCGAGTTCAACTAACTGACGCAGCTACTTCAGACATGAGTTTTGTTTTCCGTGGAACAAGAGTGCCAGATATAGAAAATGGTCTATCTGGATTTATACCCGAGCGACGTGCAATGCGGGTCCATGCAGCACGGCCTGTTAACTCAAACTCACTTGCCTTTCTTGTCACAGTTCTGTTGTTATTCATGATATTAAACTCTCACCAGATGTCGCCAAACTTTCTACTCTGGCTTGTGCTTGGTGTCTTCTTGATGGCTACAACATTAAGGATGTACGCAACGTGTCAACAACTTCAGGCTCAAGCCCAAGCTCGAGCTATGGCAGCCAGTGGCCTTCTTGGTCACACTGAATTGAGGCTACATATGCCACCATCAATAGCACTTGCAACCAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATCGTGAATTTGATGATTTAGACTATGAGACTTTGAGAGCATTGGATTCTGATAATGTTCCAACAACACCTTCTATGAGTGAGGAACAAATAAACGCTCTTCCTGTTCATAAATACAAGGTTTCTGGTCCTCAAAGCGACTCCGCTATGAATCAACAAGCTTCATCTTCTGAATCTAATGAGAAGAGGCAAGATTCTGTTAGTGCAGTTGGCGGTACTAAGACCTTAGAGGATGAACTGACTTGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAGCTCATACGTAGTTTGCCATGCTTGCATCAGTTCCATACAAACTGCATCGATCCATGGCTGCGACAGCAGGGAACATGCCCTGTTTGTAAATTCAGAGCGGTGACCGGGTGGTCAGAACACGGGCATGGGGAAACCGATGCTTATATGGTTTAA

Protein sequence

MQKQAQEFDERNTTSFCAFNSCRADRFRYLLIAVFFCLLLLGFFTEVIIDHLDFTCLAVIVIHISRVQLTDAATSDMSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV

Homology

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BLAST of Moc04g38720 vs. NCBI nr
Match: XP_022133780.1 (E3 ubiquitin-protein ligase SDIR1 [Momordica charantia] >XP_022133781.1 E3 ubiquitin-protein ligase SDIR1 [Momordica charantia])

HSP 1 Score: 541.6 bits (1394), Expect = 5.1e-150
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 136
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 137 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 196
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 197 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 256
           RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 257 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 316
           AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC
Sbjct: 181 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 240

Query: 317 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 352
           IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 275

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BLAST of Moc04g38720 vs. NCBI nr
Match: XP_008441380.1 (PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis melo] >ADN34069.1 protein binding protein [Cucumis melo subsp. melo])

HSP 1 Score: 521.9 bits (1343), Expect = 4.2e-144
Identity = 265/275 (96.36%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 136
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 137 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 196
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 197 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 256
           RLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 257 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 316
           ++NQQASSSESNEKRQDSV+AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 317 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 352
           IDPWLRQQGTCPVCKFRAV+GWSE G GETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

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BLAST of Moc04g38720 vs. NCBI nr
Match: XP_038885371.1 (E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885372.1 E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885373.1 E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885374.1 E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida])

HSP 1 Score: 515.8 bits (1327), Expect = 3.0e-142
Identity = 262/275 (95.27%), Postives = 266/275 (96.73%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 136
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 137 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 196
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 197 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 256
           RLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKV GPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVPGPQSDP 180

Query: 257 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 316
           ++NQQASSSESNEKRQD V+AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NC
Sbjct: 181 SVNQQASSSESNEKRQDLVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 317 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 352
           IDPWLRQQGTCPVCKFRAV+GWSE G GETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]

BLAST of Moc04g38720 vs. NCBI nr
Match: XP_004138475.1 (E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus] >XP_011656385.1 E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus] >XP_031743514.1 E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 3.9e-142
Identity = 263/275 (95.64%), Postives = 267/275 (97.09%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 136
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 137 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 196
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 197 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 256
           RLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 257 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 316
           ++NQQASSSES EKRQDSV+AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NC
Sbjct: 181 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 317 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 352
           IDPWLRQQGTCPVCKFRAV+GWSE   GETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 275

[Close]

BLAST of Moc04g38720 vs. NCBI nr
Match: KGN45732.1 (hypothetical protein Csa_005578 [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 3.9e-142
Identity = 263/275 (95.64%), Postives = 267/275 (97.09%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 136
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185

Query: 137 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 196
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245

Query: 197 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 256
           RLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305

Query: 257 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 316
           ++NQQASSSES EKRQDSV+AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NC
Sbjct: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365

Query: 317 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 352
           IDPWLRQQGTCPVCKFRAV+GWSE   GETDAYMV
Sbjct: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 400

[Close]

BLAST of Moc04g38720 vs. ExPASy Swiss-Prot
Match: Q9M2S6 (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.3e-111
Identity = 215/273 (78.75%), Postives = 234/273 (85.71%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLS-GFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMS 136
           MSFVFRG+R  D+E+G S GF+PERRAMRVH ARPVNSNSLAFLVTVLLLFMILNSHQM 
Sbjct: 1   MSFVFRGSR-GDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMP 60

Query: 137 PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATR 196
           PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASGL  HTELRLH+PPSIALATR
Sbjct: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATR 120

Query: 197 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSD 256
           GRLQGLRLQLALLDREFDDLDYETLRALDSDNV TT SMSEE+INALPVHKYKV  P++ 
Sbjct: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTT-SMSEEEINALPVHKYKVLDPENG 180

Query: 257 SAMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTN 316
            ++ +QAS+S S EK  DS +     K  EDELTCSVCLEQV VGE++R+LPCLHQFH  
Sbjct: 181 CSLAKQASTSSSAEKMLDSANE--SKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAG 240

Query: 317 CIDPWLRQQGTCPVCKFRAVTGWSEHGHGETDA 349
           CIDPWLRQQGTCPVCKFRA +GW E    + DA
Sbjct: 241 CIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDA 269

[Close]

BLAST of Moc04g38720 vs. ExPASy Swiss-Prot
Match: Q10R93 (Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0167500 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.7e-11
Identity = 35/70 (50.00%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 281 TKTLEDELT---CSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGT-CPVCKFRAVT 340
           TK  ED  T   C++CLE  NVGE +R LPC H+FH  C+D WL    T CPVCK  A T
Sbjct: 224 TKVQEDNCTSSMCAICLEDYNVGEKLRVLPCRHKFHAACVDLWLTTWRTFCPVCKRDAST 283

Query: 341 GWSEHGHGET 347
           G  +    ET
Sbjct: 284 GIPDPPASET 293

[Close]

BLAST of Moc04g38720 vs. ExPASy Swiss-Prot
Match: Q68DV7 (E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens OX=9606 GN=RNF43 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.7e-10
Identity = 30/77 (38.96%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 261 QASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPW 320
           QAS  ++  +  DS S+            C++CLE+ + G+ +R + CLH+FH NC+DPW
Sbjct: 249 QASCRQARGEWPDSGSSCSSAP------VCAICLEEFSEGQELRVISCLHEFHRNCVDPW 308

Query: 321 LRQQGTCPVCKFRAVTG 338
           L Q  TCP+C F    G
Sbjct: 309 LHQHRTCPLCMFNITEG 319

[Close]

BLAST of Moc04g38720 vs. ExPASy Swiss-Prot
Match: Q8NC42 (E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens OX=9606 GN=RNF149 PE=2 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 3.7e-10
Identity = 29/60 (48.33%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 286 DELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCK---FRAVTGWSEHG 343
           D   C+VC+E   V ++IR LPC H FH  CIDPWL    TCP+CK    +A+  W E G
Sbjct: 265 DAENCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWGEPG 324

[Close]

BLAST of Moc04g38720 vs. ExPASy Swiss-Prot
Match: P0DPR2 (E3 ubiquitin-protein ligase RNF43 OS=Xenopus tropicalis OX=8364 GN=rnf43 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.7e-10
Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 290 CSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKF 333
           C++CLE+   G+ +R LPC H++H  C+DPWLRQ  TCP+C +
Sbjct: 268 CAICLEEFTDGQELRILPCCHEYHLGCVDPWLRQNHTCPLCMY 310

[Close]

BLAST of Moc04g38720 vs. ExPASy TrEMBL
Match: A0A6J1BW51 (E3 ubiquitin-protein ligase SDIR1 OS=Momordica charantia OX=3673 GN=LOC111006265 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.5e-150
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 136
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 137 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 196
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 197 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 256
           RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 257 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 316
           AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC
Sbjct: 181 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 240

Query: 317 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 352
           IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 275

[Close]

BLAST of Moc04g38720 vs. ExPASy TrEMBL
Match: E5GC70 (Protein binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 2.0e-144
Identity = 265/275 (96.36%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 136
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 137 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 196
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 197 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 256
           RLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 257 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 316
           ++NQQASSSESNEKRQDSV+AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 317 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 352
           IDPWLRQQGTCPVCKFRAV+GWSE G GETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]

BLAST of Moc04g38720 vs. ExPASy TrEMBL
Match: A0A1S3B3A3 (E3 ubiquitin-protein ligase SDIR1 OS=Cucumis melo OX=3656 GN=LOC103485511 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 2.0e-144
Identity = 265/275 (96.36%), Postives = 269/275 (97.82%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 136
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 137 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 196
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 197 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 256
           RLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 257 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 316
           ++NQQASSSESNEKRQDSV+AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 317 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 352
           IDPWLRQQGTCPVCKFRAV+GWSE G GETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]

BLAST of Moc04g38720 vs. ExPASy TrEMBL
Match: A0A0A0KBF9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008630 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.9e-142
Identity = 263/275 (95.64%), Postives = 267/275 (97.09%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 136
           MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 126 MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 185

Query: 137 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 196
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 186 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 245

Query: 197 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 256
           RLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSDS
Sbjct: 246 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 305

Query: 257 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 316
           ++NQQASSSES EKRQDSV+AVG TKT EDELTCSVCLEQVNVGELIRSLPCLHQFH NC
Sbjct: 306 SVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 365

Query: 317 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 352
           IDPWLRQQGTCPVCKFRAV+GWSE   GETDAYMV
Sbjct: 366 IDPWLRQQGTCPVCKFRAVSGWSEQEQGETDAYMV 400

[Close]

BLAST of Moc04g38720 vs. ExPASy TrEMBL
Match: A0A6J1GTU0 (E3 ubiquitin-protein ligase SDIR1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457441 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 5.5e-142
Identity = 262/275 (95.27%), Postives = 265/275 (96.36%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 136
           MSFVFRGTRVPDIENGL GFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLPGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 137 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 196
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 197 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 256
           RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180

Query: 257 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 316
           A NQQASSSESNEKR DSV+AV GTK+L+DELTCSVCLEQVNVGELIRSLPCLHQFH NC
Sbjct: 181 AANQQASSSESNEKRPDSVNAVSGTKSLQDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 317 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 352
           IDPWL QQGTCPVCKFRAV GWSE G GETDAYMV
Sbjct: 241 IDPWLGQQGTCPVCKFRAVPGWSEQGQGETDAYMV 275

[Close]

BLAST of Moc04g38720 vs. TAIR 10
Match: AT3G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 404.4 bits (1038), Expect = 9.0e-113
Identity = 215/273 (78.75%), Postives = 234/273 (85.71%), Query Frame = 0


Query: 77  MSFVFRGTRVPDIENGLS-GFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMS 136
           MSFVFRG+R  D+E+G S GF+PERRAMRVH ARPVNSNSLAFLVTVLLLFMILNSHQM 
Sbjct: 1   MSFVFRGSR-GDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMP 60

Query: 137 PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATR 196
           PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASGL  HTELRLH+PPSIALATR
Sbjct: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATR 120

Query: 197 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSD 256
           GRLQGLRLQLALLDREFDDLDYETLRALDSDNV TT SMSEE+INALPVHKYKV  P++ 
Sbjct: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTT-SMSEEEINALPVHKYKVLDPENG 180

Query: 257 SAMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTN 316
            ++ +QAS+S S EK  DS +     K  EDELTCSVCLEQV VGE++R+LPCLHQFH  
Sbjct: 181 CSLAKQASTSSSAEKMLDSANE--SKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAG 240

Query: 317 CIDPWLRQQGTCPVCKFRAVTGWSEHGHGETDA 349
           CIDPWLRQQGTCPVCKFRA +GW E    + DA
Sbjct: 241 CIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDA 269

[Close]

BLAST of Moc04g38720 vs. TAIR 10
Match: AT1G04790.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.8e-13
Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 208 LDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSES 267
           +DR+F + DYE L ALD +N                 H++   G  S + +N    S+  
Sbjct: 542 MDRDFTEDDYELLLALDENN-----------------HRH---GGASANRINNLPESTVQ 601

Query: 268 NEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTC 327
            +  Q+               TC +CLE   +G+ IR LPCLH+FH +CIDPWL +  +C
Sbjct: 602 TDNFQE---------------TCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSC 630

Query: 328 PVCK 332
           PVCK
Sbjct: 662 PVCK 630

[Close]

BLAST of Moc04g38720 vs. TAIR 10
Match: AT5G08139.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-11
Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 288 LTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCKFRAVTGWSEHGHGET 347
           L C+VC +++N+G     LPC H++H+ CI PWL+ + TCPVC++   T  +E+   +T
Sbjct: 307 LVCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTDDAEYEQRKT 365

[Close]

BLAST of Moc04g38720 vs. TAIR 10
Match: AT1G80400.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 5.8e-11
Identity = 34/109 (31.19%), Postives = 56/109 (51.38%), Query Frame = 0


Query: 226 DNVPTTPSMSEEQINALPVHKYKVSGPQSDSAMNQQASSSESNEKRQDSVSAVGGTK--- 285
           +N   T   + E INALPV+++K          ++  +  E +E+ +     +G  K   
Sbjct: 298 ENFSQTRGATAEAINALPVYRFK----------SKSRNDLEFSEEGEGGFLLLGSQKKRL 357

Query: 286 TLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGTCPVCK 332
              ++ +C +CL +    E +R LPC H FH +C+D WL+   TCP+CK
Sbjct: 358 ISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCK 396

[Close]

BLAST of Moc04g38720 vs. TAIR 10
Match: AT5G66160.2 (receptor homology region transmembrane domain ring H2 motif protein 1 )

HSP 1 Score: 66.2 bits (160), Expect = 5.8e-11
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 0


Query: 289 TCSVCLEQVNVGELIRSLPCLHQFHTNCIDPWLRQQGT-CPVCK 332
           TC++CLE    GE +R LPC H FH NCID WL + GT CPVCK
Sbjct: 231 TCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCK 274

The following BLAST results are available for this feature:

BLAST of Moc04g38720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133780.1	5.1e-150	100.00	E3 ubiquitin-protein ligase SDIR1 [Momordica charantia] >XP_022133781.1 E3 ubiqu...	[more]
XP_008441380.1	4.2e-144	96.36	PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis melo] >ADN34069.1 protein ...	[more]
XP_038885371.1	3.0e-142	95.27	E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885372.1...	[more]
XP_004138475.1	3.9e-142	95.64	E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus] >XP_011656385.1 E3 ubiquitin...	[more]
KGN45732.1	3.9e-142	95.64	hypothetical protein Csa_005578 [Cucumis sativus]	[more]

BLAST of Moc04g38720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2S6	1.3e-111	78.75	E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 ...	[more]
Q10R93	9.7e-11	50.00	Receptor homology region, transmembrane domain- and RING domain-containing prote...	[more]
Q68DV7	1.7e-10	38.96	E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens OX=9606 GN=RNF43 PE=1 SV=1	[more]
Q8NC42	3.7e-10	48.33	E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens OX=9606 GN=RNF149 PE=2 SV=2	[more]
P0DPR2	3.7e-10	51.16	E3 ubiquitin-protein ligase RNF43 OS=Xenopus tropicalis OX=8364 GN=rnf43 PE=2 SV...	[more]

BLAST of Moc04g38720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BW51	2.5e-150	100.00	E3 ubiquitin-protein ligase SDIR1 OS=Momordica charantia OX=3673 GN=LOC111006265...	[more]
E5GC70	2.0e-144	96.36	Protein binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3B3A3	2.0e-144	96.36	E3 ubiquitin-protein ligase SDIR1 OS=Cucumis melo OX=3656 GN=LOC103485511 PE=4 S...	[more]
A0A0A0KBF9	1.9e-142	95.64	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008630 P...	[more]
A0A6J1GTU0	5.5e-142	95.27	E3 ubiquitin-protein ligase SDIR1-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of Moc04g38720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55530.1	9.0e-113	78.75	RING/U-box superfamily protein	[more]
AT1G04790.1	4.8e-13	34.68	RING/U-box superfamily protein	[more]
AT5G08139.1	3.4e-11	40.68	RING/U-box superfamily protein	[more]
AT1G80400.1	5.8e-11	31.19	RING/U-box superfamily protein	[more]
AT5G66160.2	5.8e-11	61.36	receptor homology region transmembrane domain ring H2 motif protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 290..330 e-value: 1.3E-8 score: 44.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 289..331 e-value: 5.7E-12 score: 45.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 290..331 score: 12.356501
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 224..335 e-value: 3.2E-19 score: 70.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..278
None	No IPR available	PANTHER	PTHR45977:SF4	E3 UBIQUITIN-PROTEIN LIGASE SDIR1	coord: 77..349
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 77..349
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 289..331 e-value: 4.15302E-23 score: 88.5129
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 284..337

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g38720.1	Moc04g38720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009789	positive regulation of abscisic acid-activated signaling pathway
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity