Moc04g37600 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g37600
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	60S ribosomal protein L10
Location	chr4: 28206151 .. 28208195 (+)
RNA-Seq Expression	Moc04g37600
Synteny	Moc04g37600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGAAGTACGTAAATCTTTTCGTTTCTTCATCTAATATAATCTTCCATGTTCTTCTCTGATGAATAATCTACTTGTCTGTCGCTCTTTTTTTTTTAATTTTTTTTTTATGTTATATGCATCTTCTTCATCGTTTTTTTTTTATCGGACGCAATCTGAGGATAAAAATTAGTTTATCAGAAAATGTACGGTATATCGGTGATGATCGTCACTTTATCTTGGATGCATAGTTAAACTGTTGGAAATGGATGGGTTTCTGCTTCTTCCTGTTGGAATCTGTGGTGCTTTAGTCTTCTTTTGAACTGTCTCTTTAATGTCTTGGTCTTGATATCTATAATTTGTTATTCATGCGTGTTCTTGAGCAGGAAGGCAAACTAATGTTGATTATACATTCAATTCCTAAGATGCAGTCTGTTCAATCTCTCGTATCAAATTATTAATTATCGTTTAGCTTACGCATTGTTATATGTTGCGCAGATTTCAAAGTAGTTACATCTTGCACCCTTGTTAGTTTTCGCATTATGCTTTTCAGTGAATACACAGAATGGGGTTTTTACTATGCACATGGAGGAATATTGCAACTTTTTTGTTTTAATCGCACTCTAGTTGCAAGTGCATACTTAGTTGAGTGCATCTTCTCGGTGGAAAATATTAGGTGGTGATTGTTAGAATACTTAAGTTATGCAAATAAATTATGCGTAGCGGATCCCATCATGTTCCTTTGAGTTGATAGTCTCTGACAACCCTTATGTAATTATAATTATTTATCCACACCACATGCTCTTGTATGAGGAGTCATAGTTTGAAATGATTTGTCTTTTTATGTTCATTCTGCTTGTTATTCATTGCCTTTTATTATATTTTGTAGGACCTGCTAGGTGTTACCGACAGATTAAGAATAAGCCATATCCCAAATCTCGGTTCTGTCGTGGTGTTCCTGATCCTAAAATCAGGATCTATGATGTTGGAATGAAGAAGAAAGGAGTGGATGAATTTCCATTTTGTGTTCACCTAGTGAGTTGGGAGAAAGAAAATGTGTCCAGTGAGGCTTTGGAAGCCGCTAGGATTGCTTGTAACAAGTATATGGCCAAATTTGCTGGAAAGGATGCGTTCCATTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGAATGAGAGGTGCTTTTGGCAAGCCACAAGGAACCTGTGCAAGAGTGGCAATTGGTCAGGTTCTTCTTTCGGTCCGCTGCAAGGATAGCAACAGCCAGCACGCCCAGGAGGCCCTCCGTCGTGCTAAGTTCAAGTTCCCTGGACGTCAGAAGATCATTGTTAGCAGGAAGTGGTACGTCTTGAGAATTTTTGCAACTTGTTTTTTATTCCTCTTGCATTGTAAACTAGCTTCGCTGCTATGCATTACTTTTCACTTGCCTTGAGTGTGTTCCTTTCAAATAGATTGTTGCGTGGAATTTTCATTCTTTGTTTGGGATTAGATGGAGGAGTATACAAGTCTTACTGATTGATAATTGTTTCAAATTTCTTTTTCCAGGGGATTCACTAAATTCAGTCGAGCTGATTATCTTAAGTTCAAGGCAGAGAACAGAATTCTTCCCGATGGTGTTAACGCCAAGGTAAGCTATATTGCATTCATTCCATATACATGCTTTATTGCTTTCATTTGTACACAAGAATCCATCCAAGGTTTGCTACCAGACGCCACTTCTCTTCTATGTAATGAACTAATTTATGAAGACTCATTTGAAGCATCTGAACATAATAGATATTCTCTGGATGCTATAAATGTTACTTGGTTGGTAGGATCATATTTCATTATTTCTCATAGCTTGTCGATTTTTCTTGGTTCTTATTCTCTGATAAGTCATAATTACATGGTTAATTTGGTTATTACTTTCAATTTGTTAACTGATGGAGCCGCATTTGGACTTTGCAGCTTCTTGGATGCCACGGGCCTTTAGCGAATCGTCAGCCTGGAAGAGCTTTTCTAGAAGCTGCCTAA

mRNA sequence

ATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAGAATAAGCCATATCCCAAATCTCGGTTCTGTCGTGGTGTTCCTGATCCTAAAATCAGGATCTATGATGTTGGAATGAAGAAGAAAGGAGTGGATGAATTTCCATTTTGTGTTCACCTAGTGAGTTGGGAGAAAGAAAATGTGTCCAGTGAGGCTTTGGAAGCCGCTAGGATTGCTTGTAACAAGTATATGGCCAAATTTGCTGGAAAGGATGCGTTCCATTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGAATGAGAGGTGCTTTTGGCAAGCCACAAGGAACCTGTGCAAGAGTGGCAATTGGTCAGGTTCTTCTTTCGGTCCGCTGCAAGGATAGCAACAGCCAGCACGCCCAGGAGGCCCTCCGTCGTGCTAAGTTCAAGTTCCCTGGACGTCAGAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAATTCAGTCGAGCTGATTATCTTAAGTTCAAGGCAGAGAACAGAATTCTTCCCGATGGTGTTAACGCCAAGCTTCTTGGATGCCACGGGCCTTTAGCGAATCGTCAGCCTGGAAGAGCTTTTCTAGAAGCTGCCTAA

Coding sequence (CDS)

ATGGGGAGAAGACCTGCTAGGTGTTACCGACAGATTAAGAATAAGCCATATCCCAAATCTCGGTTCTGTCGTGGTGTTCCTGATCCTAAAATCAGGATCTATGATGTTGGAATGAAGAAGAAAGGAGTGGATGAATTTCCATTTTGTGTTCACCTAGTGAGTTGGGAGAAAGAAAATGTGTCCAGTGAGGCTTTGGAAGCCGCTAGGATTGCTTGTAACAAGTATATGGCCAAATTTGCTGGAAAGGATGCGTTCCATTTGAGGGTCAGGGTGCACCCCTTCCATGTTCTGCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGAATGAGAGGTGCTTTTGGCAAGCCACAAGGAACCTGTGCAAGAGTGGCAATTGGTCAGGTTCTTCTTTCGGTCCGCTGCAAGGATAGCAACAGCCAGCACGCCCAGGAGGCCCTCCGTCGTGCTAAGTTCAAGTTCCCTGGACGTCAGAAGATCATTGTTAGCAGGAAGTGGGGATTCACTAAATTCAGTCGAGCTGATTATCTTAAGTTCAAGGCAGAGAACAGAATTCTTCCCGATGGTGTTAACGCCAAGCTTCTTGGATGCCACGGGCCTTTAGCGAATCGTCAGCCTGGAAGAGCTTTTCTAGAAGCTGCCTAA

Protein sequence

MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA

Homology

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BLAST of Moc04g37600 vs. NCBI nr
Match: XP_022134496.1 (60S ribosomal protein L10 [Momordica charantia])

HSP 1 Score: 456.1 bits (1172), Expect = 1.8e-124
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA 220
           YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA
Sbjct: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA 219

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BLAST of Moc04g37600 vs. NCBI nr
Match: XP_020239249.1 (60S ribosomal protein L10 [Cajanus cajan])

HSP 1 Score: 448.4 bits (1152), Expect = 3.7e-122
Identity = 214/219 (97.72%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR+D
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRSD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA 220
           YLKFK+ENRILPDGVNAKLLGCHGPLANRQPGRAFL  A
Sbjct: 181 YLKFKSENRILPDGVNAKLLGCHGPLANRQPGRAFLNTA 219

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BLAST of Moc04g37600 vs. NCBI nr
Match: AFK38655.1 (unknown [Lotus japonicus])

HSP 1 Score: 448.4 bits (1152), Expect = 3.7e-122
Identity = 213/219 (97.26%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA 220
           YLK+K+ENRILPDGVNAKLLGCHGPLANRQPGRAF++AA
Sbjct: 181 YLKYKSENRILPDGVNAKLLGCHGPLANRQPGRAFIDAA 219

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BLAST of Moc04g37600 vs. NCBI nr
Match: XP_004147346.1 (60S ribosomal protein L10 [Cucumis sativus] >KGN62212.1 hypothetical protein Csa_016962 [Cucumis sativus])

HSP 1 Score: 448.0 bits (1151), Expect = 4.8e-122
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFL 217
           YLKFK+EN+I+PDGVNAKLLGCHGPLANRQPGRAFL
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL 216

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BLAST of Moc04g37600 vs. NCBI nr
Match: XP_008460864.1 (PREDICTED: 60S ribosomal protein L10 [Cucumis melo] >XP_038900395.1 60S ribosomal protein L10 [Benincasa hispida] >KAA0040746.1 60S ribosomal protein L10 [Cucumis melo var. makuwa] >TYK02062.1 60S ribosomal protein L10 [Cucumis melo var. makuwa])

HSP 1 Score: 448.0 bits (1151), Expect = 4.8e-122
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFL 217
           YLKFK+EN+I+PDGVNAKLLGCHGPLANRQPGRAFL
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL 216

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BLAST of Moc04g37600 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 3.6e-120
Identity = 202/218 (92.66%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKWGFTKF+R D
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEA 219
           Y+K+K++NRILPDGVNAKLLGCHGPLANRQPG+AF+ A
Sbjct: 181 YIKWKSQNRILPDGVNAKLLGCHGPLANRQPGKAFINA 218

[Close]

BLAST of Moc04g37600 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 6.7e-119
Identity = 204/219 (93.15%), Postives = 210/219 (95.89%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQG CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA 220
           YLK+K+ENRI+PDGVNAKLLG HGPLA RQPGRAFL ++
Sbjct: 181 YLKYKSENRIVPDGVNAKLLGNHGPLAARQPGRAFLSSS 219

[Close]

BLAST of Moc04g37600 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 8.8e-119
Identity = 203/218 (93.12%), Postives = 211/218 (96.79%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQG CARVAIGQVLLSVRCKD+NS +AQEALRRAKFKFPGRQKIIVSRKWGFTK +RAD
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEA 219
           Y + K+ENRILPDGVNAKLLGCHG LANR+PGRAF++A
Sbjct: 181 YPRLKSENRILPDGVNAKLLGCHGRLANRKPGRAFIDA 218

[Close]

BLAST of Moc04g37600 vs. ExPASy Swiss-Prot
Match: Q08770 (60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2)

HSP 1 Score: 411.4 bits (1056), Expect = 6.5e-114
Identity = 194/218 (88.99%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEA 219
           Y K + E RI+PDGVNAK L CHGPLANRQPG AFL A
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLSA 218

[Close]

BLAST of Moc04g37600 vs. ExPASy Swiss-Prot
Match: Q93VT9 (60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.4e-113
Identity = 193/218 (88.53%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEA 219
           + K + E R++PDGVNAK L CHGPLANRQPG AFL A
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLPA 218

[Close]

BLAST of Moc04g37600 vs. ExPASy TrEMBL
Match: A0A6J1BXY7 (60S ribosomal protein L10 OS=Momordica charantia OX=3673 GN=LOC111006723 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 8.5e-125
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA 220
           YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA
Sbjct: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA 219

[Close]

BLAST of Moc04g37600 vs. ExPASy TrEMBL
Match: I3SEG3 (Ribosomal_L16 domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.8e-122
Identity = 213/219 (97.26%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWGFTKFSR D
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEAA 220
           YLK+K+ENRILPDGVNAKLLGCHGPLANRQPGRAF++AA
Sbjct: 181 YLKYKSENRILPDGVNAKLLGCHGPLANRQPGRAFIDAA 219

[Close]

BLAST of Moc04g37600 vs. ExPASy TrEMBL
Match: A0A5A7TFE6 (60S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold680G00450 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.3e-122
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFL 217
           YLKFK+EN+I+PDGVNAKLLGCHGPLANRQPGRAFL
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL 216

[Close]

BLAST of Moc04g37600 vs. ExPASy TrEMBL
Match: A0A0A0LN38 (Ribosomal_L16 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G336100 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.3e-122
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFL 217
           YLKFK+EN+I+PDGVNAKLLGCHGPLANRQPGRAFL
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL 216

[Close]

BLAST of Moc04g37600 vs. ExPASy TrEMBL
Match: A0A1S3CDF3 (60S ribosomal protein L10 OS=Cucumis melo OX=3656 GN=LOC103499612 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.3e-122
Identity = 213/216 (98.61%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFL 217
           YLKFK+EN+I+PDGVNAKLLGCHGPLANRQPGRAFL
Sbjct: 181 YLKFKSENKIMPDGVNAKLLGCHGPLANRQPGRAFL 216

[Close]

BLAST of Moc04g37600 vs. TAIR 10
Match: AT1G26910.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 411.4 bits (1056), Expect = 4.6e-115
Identity = 194/218 (88.99%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEA 219
           Y K + E RI+PDGVNAK L CHGPLANRQPG AFL A
Sbjct: 181 YTKLRQEKRIVPDGVNAKFLSCHGPLANRQPGSAFLSA 218

[Close]

BLAST of Moc04g37600 vs. TAIR 10
Match: AT1G14320.1 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 410.2 bits (1053), Expect = 1.0e-114
Identity = 193/218 (88.53%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEA 219
           + K + E R++PDGVNAK L CHGPLANRQPG AFL A
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLPA 218

[Close]

BLAST of Moc04g37600 vs. TAIR 10
Match: AT1G66580.1 (senescence associated gene 24 )

HSP 1 Score: 404.1 bits (1037), Expect = 7.4e-113
Identity = 192/218 (88.07%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
           K  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RA+
Sbjct: 121 KALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAE 180

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEA 219
           Y K +A  RI+PDGVNAK L  HGPLANRQPG AF+ A
Sbjct: 181 YTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFISA 218

[Close]

BLAST of Moc04g37600 vs. TAIR 10
Match: AT1G14320.2 (Ribosomal protein L16p/L10e family protein )

HSP 1 Score: 278.5 bits (711), Expect = 4.7e-75
Identity = 141/218 (64.68%), Postives = 150/218 (68.81%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKGKPYPKSRYCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM                                            
Sbjct: 61  SSEALEAARIACNKYM-------------------------------------------- 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRAD 180
                        VLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKWGFTKF+RAD
Sbjct: 121 -------------VLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAD 161

Query: 181 YLKFKAENRILPDGVNAKLLGCHGPLANRQPGRAFLEA 219
           + K + E R++PDGVNAK L CHGPLANRQPG AFL A
Sbjct: 181 FTKLRQEKRVVPDGVNAKFLSCHGPLANRQPGSAFLPA 161

The following BLAST results are available for this feature:

BLAST of Moc04g37600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134496.1	1.8e-124	100.00	60S ribosomal protein L10 [Momordica charantia]	[more]
XP_020239249.1	3.7e-122	97.72	60S ribosomal protein L10 [Cajanus cajan]	[more]
AFK38655.1	3.7e-122	97.26	unknown [Lotus japonicus]	[more]
XP_004147346.1	4.8e-122	98.61	60S ribosomal protein L10 [Cucumis sativus] >KGN62212.1 hypothetical protein Csa...	[more]
XP_008460864.1	4.8e-122	98.61	PREDICTED: 60S ribosomal protein L10 [Cucumis melo] >XP_038900395.1 60S ribosoma...	[more]

BLAST of Moc04g37600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SPB3	3.6e-120	92.66	60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1	[more]
P93847	6.7e-119	93.15	60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1	[more]
Q9M5M7	8.8e-119	93.12	60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1	[more]
Q08770	6.5e-114	88.99	60S ribosomal protein L10-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10B PE=2 SV=2	[more]
Q93VT9	1.4e-113	88.53	60S ribosomal protein L10-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10A PE=1 SV=1	[more]

BLAST of Moc04g37600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BXY7	8.5e-125	100.00	60S ribosomal protein L10 OS=Momordica charantia OX=3673 GN=LOC111006723 PE=3 SV...	[more]
I3SEG3	1.8e-122	97.26	Ribosomal_L16 domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1	[more]
A0A5A7TFE6	2.3e-122	98.61	60S ribosomal protein L10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0LN38	2.3e-122	98.61	Ribosomal_L16 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G3361...	[more]
A0A1S3CDF3	2.3e-122	98.61	60S ribosomal protein L10 OS=Cucumis melo OX=3656 GN=LOC103499612 PE=3 SV=1	[more]

BLAST of Moc04g37600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26910.1	4.6e-115	88.99	Ribosomal protein L16p/L10e family protein	[more]
AT1G14320.1	1.0e-114	88.53	Ribosomal protein L16p/L10e family protein	[more]
AT1G66580.1	7.4e-113	88.07	senescence associated gene 24	[more]
AT1G14320.2	4.7e-75	64.68	Ribosomal protein L16p/L10e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001197	Ribosomal protein L10e	TIGRFAM	TIGR00279	TIGR00279	coord: 1..174 e-value: 3.3E-77 score: 256.0
IPR001197	Ribosomal protein L10e	PIRSF	PIRSF005590	RPL10a_RPL10e	coord: 1..182 e-value: 2.7E-95 score: 314.9
IPR001197	Ribosomal protein L10e	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 1..218
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 12..166 e-value: 1.0E-36 score: 125.9
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 41..166 e-value: 2.61525E-44 score: 142.245
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10	Ribosomal protein L10e/L16	coord: 1..216 e-value: 1.3E-117 score: 393.0
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 4..173
None	No IPR available	PANTHER	PTHR11726:SF42	60S RIBOSOMAL PROTEIN L10-LIKE	coord: 1..218
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 108..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g37600.1	Moc04g37600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome