Moc04g35960 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g35960
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	ABC transporter B family member 15-like
Location	chr4: 26935828 .. 26937622 (-)
RNA-Seq Expression	Moc04g35960
Synteny	Moc04g35960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCGGACGCTGTGGACAAGTTTCTGATGGCGTTGGGCTTCATCGGAGCCGTGGGCGACGGCCTCACCAGCCCCTTTCTTTTCATTCTCTCCAGTCGTTTGATGAACAACATCGGCTTCGCCTCTTCTTCACATTCCTTTCAAACCAACATCAATCAAGTCGATATTATTTATTAACTTCTTCAAATCTCTATTCATTTCTCGTTTTTAATTTAACATTTGGGTTTTTGTGGGCAATGTAACAGAATGCGGTGGCTCTGTTGTATGTAGCATGTGTGGCATTTGTTGCATGTTTTCTCGGTGGGTTTCGTTTTTATTTGAATATATAATTAAAGGCGTCTGAAATTGAATTGATCTGATCATGTTGTGCGTTGGAATATTCTGCAGAAGGATACTGTTGGACCAGAACTGCCGAGAGACAGACGTCGAGAATGAGAGCTCGGTATCTTCGGGCGGTTCTCCGGCAAGAAGTCGGCTACTTCGATCTTCACGTGACAAGCACGTCCGAGGTCATCACCTCTGTCTCCAACGACACCTTGGTCATTCAAGACGTTTTAAGCGAAATGGTTAAGGGTTTTTTCTCTCTCCCTTTTTTCTTGAAAAACATATTTAGTGTTATTCTAAATTGATAACAAATTAGTTGTTGAATTAAACGGAAAAGTTTAAAATTTATAACAATGTCAATTTTTATTATATAACAATTTAGTCTATCTAATTTATAAATATATATATTTTATCCCTCATCGGTTTATATATTTAAATGTATAAAAAATTTAATAAAATTTTTTGACAATAAATATTAAATCGTTACAATTTAGAGCTAATGTTTTAATTTCTTTTTTTCCCCTTTGGTCACATTCAAATCATCACAATAGCTGTATTTAAAAAAAAAAAATCGATCATAATACCTCTGATTTGGCAATTCATGTATTTAGCCATTAATTGGAATACAGATAAACTAAAAGTATGACGTGTAGTAGTAAGAGCTCCATCAAATTTCCAAAATTATTCTATTTACCCTCAAAAGTCCAAATTTATTCTTGGTGTTTCAATAATTTTAAAATAGTTTTTATGTTTATCTAAAAAATTAAAAATTTTATAGTATTCCTATATTCTTTGAATTTAAAATTTTTCTTCCAACCTAATTTGTTAATATAGTTGGATCCAACGTTACTTTTAAATGATACCGGTATCATAGGGCAGATAATAAATGAAAACAAAATTTTCCCATAAAAATTGTGTCTTTCTTGAAGAAAAGTTATTATTATTTTTTTTTAAACCCAAATAAAAATTGACCTCAAACTAACAATGAAATTATTTTTGAAATTGGCGAAGTGTTAAGAGTAAATGAGCAAAAAATAATTTGTTTTATTTTTTTTCTAATGGGTTCTTCAACAGATTTCCCGTTAACTATTTTTCTTTTTCTTGTCTTCAAAAAAAAATAATTAATCCAGATCCCAAACTTCCTAATGAATGCGGCAATGTTCTTCGGATGCTACATCGCCGCCGTGGTACTATTCTGGAAACTAGCGGTGGTCGGATTGCCGTTCGTGGTGGTTATGTTGATCCCAGGGCTCCTCTACGGAAAAATCTTAATGGGGTTGACGAGAAAGAGAATGGAAAGTTACGAAAAGGCCGGAACAGTGGCGGAACAGGCGATATCGTCGATCAGAACGGTGTACGCCTTCGCCGGAGAAGAGAAGACGGTGGCGGAATATTCGTCGGCGTTAGAAAGGTCGGTGAAGCTGGGGCTGAAGCAGGGATTCTCCAAAGGCTTGGCTATCGGAAGTAA

mRNA sequence

ATGCATGCGGACGCTGTGGACAAGTTTCTGATGGCGTTGGGCTTCATCGGAGCCGTGGGCGACGGCCTCACCAGCCCCTTTCTTTTCATTCTCTCCAGTCGTTTGATGAACAACATCGGCTTCGCCTCTTCTTCACATTCCTTTCAAACCAACATCAATCAAAATGCGGTGGCTCTGTTGTATGTAGCATGTGTGGCATTTGTTGCATGTTTTCTCGAAGGATACTGTTGGACCAGAACTGCCGAGAGACAGACGTCGAGAATGAGAGCTCGGTATCTTCGGGCGGTTCTCCGGCAAGAAGTCGGCTACTTCGATCTTCACGTGACAAGCACGTCCGAGGTCATCACCTCTGTCTCCAACGACACCTTGGTCATTCAAGACGTTTTAAGCGAAATGGTTAAGGATCCCAAACTTCCTAATGAATGCGGCAATGTTCTTCGGATGCTACATCGCCGCCGTGGTACTATTCTGGAAACTAGCGGTGGTCGGATTGCCGTTCGTGGTGGTTATGTTGATCCCAGGGCTCCTCTACGGAAAAATCTTAATGGGGTTGACGAGAAAGAGAATGGAAAGTTACGAAAAGGCCGGAACAGTGGCGGAACAGGCGATATCGTCGATCAGAACGGTGTACGCCTTCGCCGGAGAAGAGAAGACGGTGGCGGAATATTCGTCGGCGTTAGAAAGGTCGGTGAAGCTGGGGCTGAAGCAGGGATTCTCCAAAGGCTTGGCTATCGGAAGTAA

Coding sequence (CDS)

ATGCATGCGGACGCTGTGGACAAGTTTCTGATGGCGTTGGGCTTCATCGGAGCCGTGGGCGACGGCCTCACCAGCCCCTTTCTTTTCATTCTCTCCAGTCGTTTGATGAACAACATCGGCTTCGCCTCTTCTTCACATTCCTTTCAAACCAACATCAATCAAAATGCGGTGGCTCTGTTGTATGTAGCATGTGTGGCATTTGTTGCATGTTTTCTCGAAGGATACTGTTGGACCAGAACTGCCGAGAGACAGACGTCGAGAATGAGAGCTCGGTATCTTCGGGCGGTTCTCCGGCAAGAAGTCGGCTACTTCGATCTTCACGTGACAAGCACGTCCGAGGTCATCACCTCTGTCTCCAACGACACCTTGGTCATTCAAGACGTTTTAAGCGAAATGGTTAAGGATCCCAAACTTCCTAATGAATGCGGCAATGTTCTTCGGATGCTACATCGCCGCCGTGGTACTATTCTGGAAACTAGCGGTGGTCGGATTGCCGTTCGTGGTGGTTATGTTGATCCCAGGGCTCCTCTACGGAAAAATCTTAATGGGGTTGACGAGAAAGAGAATGGAAAGTTACGAAAAGGCCGGAACAGTGGCGGAACAGGCGATATCGTCGATCAGAACGGTGTACGCCTTCGCCGGAGAAGAGAAGACGGTGGCGGAATATTCGTCGGCGTTAGAAAGGTCGGTGAAGCTGGGGCTGAAGCAGGGATTCTCCAAAGGCTTGGCTATCGGAAGTAA

Protein sequence

MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASSSHSFQTNINQNAVALLYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVSNDTLVIQDVLSEMVKDPKLPNECGNVLRMLHRRRGTILETSGGRIAVRGGYVDPRAPLRKNLNGVDEKENGKLRKGRNSGGTGDIVDQNGVRLRRRREDGGGIFVGVRKVGEAGAEAGILQRLGYRK

Homology

[Close]

BLAST of Moc04g35960 vs. NCBI nr
Match: XP_022133620.1 (LOW QUALITY PROTEIN: ABC transporter B family member 15-like [Momordica charantia])

HSP 1 Score: 256.9 bits (655), Expect = 1.8e-64
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASSSHSFQTNINQNAVALL 60
           MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASSSHSFQTNINQNAVALL
Sbjct: 24  MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASSSHSFQTNINQNAVALL 83

Query: 61  YVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVSN 120
           YVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVSN
Sbjct: 84  YVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVSN 143

Query: 121 DTLVIQDVLSEMV 134
           DTLVIQDVLSEM+
Sbjct: 144 DTLVIQDVLSEMI 156

[Close]

BLAST of Moc04g35960 vs. NCBI nr
Match: XP_022133729.1 (ABC transporter B family member 15-like, partial [Momordica charantia])

HSP 1 Score: 223.0 bits (567), Expect = 2.8e-54
Identity = 117/146 (80.14%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASS------SHSFQTNINQ 60
           MHADAVDKFLMALGFIGA+GDGLT+P + ++SSRLMNNIGFASS      SHSFQTNI++
Sbjct: 30  MHADAVDKFLMALGFIGAMGDGLTTPLVLVVSSRLMNNIGFASSSDPSDISHSFQTNIDK 89

Query: 61  NAVALLYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEV 120
           NAVALLYVAC  F+ACFLEGYCWTRT ERQ++RMRARYLRAVLRQEVGYFDLHVTSTSEV
Sbjct: 90  NAVALLYVACGGFLACFLEGYCWTRTGERQSARMRARYLRAVLRQEVGYFDLHVTSTSEV 149

Query: 121 ITSVSNDTLVIQDVLSEMVKDPKLPN 141
           ITSVSND+LVIQDV SE     K+PN
Sbjct: 150 ITSVSNDSLVIQDVFSE-----KIPN 170

[Close]

BLAST of Moc04g35960 vs. NCBI nr
Match: XP_008458712.1 (PREDICTED: ABC transporter B family member 15-like [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-50
Identity = 110/144 (76.39%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASS----SHSFQTNINQNA 60
           MHADAVDKFLM LGFIGA+GDGLT+P + ++SSRLMNNIG  SS    + SF TNI++NA
Sbjct: 31  MHADAVDKFLMTLGFIGAIGDGLTTPLVLVVSSRLMNNIGHTSSASSITDSFVTNIDKNA 90

Query: 61  VALLYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVIT 120
           VALLYVAC  FVACFLEGYCWTRT ERQ +RMRARYL+AVLRQ+VGYFDLHVTSTSEVIT
Sbjct: 91  VALLYVACGGFVACFLEGYCWTRTGERQAARMRARYLKAVLRQDVGYFDLHVTSTSEVIT 150

Query: 121 SVSNDTLVIQDVLSEMVKDPKLPN 141
           SVSND+L+IQDVLSE     K+PN
Sbjct: 151 SVSNDSLIIQDVLSE-----KIPN 169

[Close]

BLAST of Moc04g35960 vs. NCBI nr
Match: XP_023517420.1 (ABC transporter B family member 15-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.8 bits (530), Expect = 5.5e-50
Identity = 109/143 (76.22%), Postives = 122/143 (85.31%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASS---SHSFQTNINQNAV 60
           MHADAVDKFLM LGFIGA+GDG T+P + I+SSRLMNNIG  SS   + SF TN+++NAV
Sbjct: 26  MHADAVDKFLMTLGFIGAIGDGFTTPLVLIVSSRLMNNIGATSSNSPTESFVTNVDKNAV 85

Query: 61  ALLYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITS 120
           ALLYVAC  FVACFLEGYCWTRT ERQ +RMRARYL+AVLRQ+VGYFDLHVTSTSEVITS
Sbjct: 86  ALLYVACGGFVACFLEGYCWTRTGERQAARMRARYLKAVLRQDVGYFDLHVTSTSEVITS 145

Query: 121 VSNDTLVIQDVLSEMVKDPKLPN 141
           VSND+LVIQDV SE     K+PN
Sbjct: 146 VSNDSLVIQDVFSE-----KIPN 163

[Close]

BLAST of Moc04g35960 vs. NCBI nr
Match: XP_038890487.1 (LOW QUALITY PROTEIN: ABC transporter B family member 15-like [Benincasa hispida])

HSP 1 Score: 208.4 bits (529), Expect = 7.1e-50
Identity = 110/143 (76.92%), Postives = 123/143 (86.01%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASS---SHSFQTNINQNAV 60
           MHADAVDKFLM LGFIGA+GDGLT+P + I+SSRLMNNIG  SS   + SF  NI++NAV
Sbjct: 28  MHADAVDKFLMTLGFIGAIGDGLTTPLVLIVSSRLMNNIGQTSSISITDSFVANIDKNAV 87

Query: 61  ALLYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITS 120
           ALLYVAC  FVACF+EGYCWTRT ERQ +RMRARYL+AVLRQ+VGYFDLHVTSTSEVITS
Sbjct: 88  ALLYVACGGFVACFVEGYCWTRTGERQAARMRARYLKAVLRQDVGYFDLHVTSTSEVITS 147

Query: 121 VSNDTLVIQDVLSEMVKDPKLPN 141
           VSND+LVIQDVLSE     K+PN
Sbjct: 148 VSNDSLVIQDVLSE-----KIPN 165

[Close]

BLAST of Moc04g35960 vs. ExPASy Swiss-Prot
Match: Q9LHD1 (ABC transporter B family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCB15 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.5e-46
Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFAS-SSHSFQTNINQNAVAL 60
           MHAD VD  LM LG IGAVGDG T+P + +++S+LMNNIG +S ++ +F  +I++N+VAL
Sbjct: 25  MHADGVDWLLMGLGLIGAVGDGFTTPLVLLITSKLMNNIGGSSFNTDTFMQSISKNSVAL 84

Query: 61  LYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVS 120
           LYVAC ++V CFLEGYCWTRT ERQT+RMR +YLRAVLRQ+VGYFDLHVTSTS+VITSVS
Sbjct: 85  LYVACGSWVVCFLEGYCWTRTGERQTARMREKYLRAVLRQDVGYFDLHVTSTSDVITSVS 144

Query: 121 NDTLVIQDVLSEMVKDPKLPN 141
           +D+ VIQDVLSE     KLPN
Sbjct: 145 SDSFVIQDVLSE-----KLPN 160

[Close]

BLAST of Moc04g35960 vs. ExPASy Swiss-Prot
Match: Q9LSJ5 (ABC transporter B family member 18 OS=Arabidopsis thaliana OX=3702 GN=ABCB18 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-43
Identity = 90/141 (63.83%), Postives = 112/141 (79.43%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFAS-SSHSFQTNINQNAVAL 60
           MHAD VD  LMALG IGAVGDG  +P +F + S+L+NN+G +S    +F   + +NAVAL
Sbjct: 13  MHADGVDWMLMALGLIGAVGDGFITPIIFFICSKLLNNVGGSSFDDETFMQTVAKNAVAL 72

Query: 61  LYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVS 120
           +YVAC ++V CF+EGYCWTRT ERQ ++MR +YL+AVLRQ+VGYFDLHVTSTS+VITSVS
Sbjct: 73  VYVACASWVICFIEGYCWTRTGERQAAKMREKYLKAVLRQDVGYFDLHVTSTSDVITSVS 132

Query: 121 NDTLVIQDVLSEMVKDPKLPN 141
           +D+LVIQD LSE     KLPN
Sbjct: 133 SDSLVIQDFLSE-----KLPN 148

[Close]

BLAST of Moc04g35960 vs. ExPASy Swiss-Prot
Match: Q9LSJ8 (ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.9e-43
Identity = 90/141 (63.83%), Postives = 112/141 (79.43%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIG-FASSSHSFQTNINQNAVAL 60
           MHAD VD  LM LG IGAVGDG  +P LF +++ L+N+ G F+ +  +F   I++NA+A+
Sbjct: 12  MHADGVDWMLMGLGLIGAVGDGFITPILFFITAMLLNDFGSFSFNDETFMQPISKNALAM 71

Query: 61  LYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVS 120
           LYVAC ++V CFLEGYCWTRT ERQ ++MR RYLRAVLRQ+VGYFDLHVTSTS++ITSVS
Sbjct: 72  LYVACASWVICFLEGYCWTRTGERQAAKMRERYLRAVLRQDVGYFDLHVTSTSDIITSVS 131

Query: 121 NDTLVIQDVLSEMVKDPKLPN 141
           +D+LVIQD LSE     KLPN
Sbjct: 132 SDSLVIQDFLSE-----KLPN 147

[Close]

BLAST of Moc04g35960 vs. ExPASy Swiss-Prot
Match: Q9LSJ6 (ABC transporter B family member 17 OS=Arabidopsis thaliana OX=3702 GN=ABCB17 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.9e-43
Identity = 92/141 (65.25%), Postives = 113/141 (80.14%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASSSH-SFQTNINQNAVAL 60
           MHAD VD  LMALG IGAVGDG  +P +  + + L+NN+G +SS++ +F   I++N VAL
Sbjct: 25  MHADGVDWILMALGLIGAVGDGFITPVVVFIFNTLLNNLGTSSSNNKTFMQTISKNVVAL 84

Query: 61  LYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVS 120
           LYVAC ++V CFLEGYCWTRT ERQ +RMR +YLRAVLRQ+VGYFDLHVTSTS+VITS+S
Sbjct: 85  LYVACGSWVICFLEGYCWTRTGERQAARMREKYLRAVLRQDVGYFDLHVTSTSDVITSIS 144

Query: 121 NDTLVIQDVLSEMVKDPKLPN 141
           +D+LVIQD LSE     KLPN
Sbjct: 145 SDSLVIQDFLSE-----KLPN 160

[Close]

BLAST of Moc04g35960 vs. ExPASy Swiss-Prot
Match: Q9LSJ2 (ABC transporter B family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCB22 PE=3 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 7.4e-42
Identity = 93/141 (65.96%), Postives = 110/141 (78.01%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFAS-SSHSFQTNINQNAVAL 60
           MHA++VD  LM LG IGAVGDG  +P +F ++  L+N+IG +S    +F   I +NAVAL
Sbjct: 12  MHANSVDLVLMGLGLIGAVGDGFITPIIFFITGLLLNDIGDSSFGDKTFMHAIMKNAVAL 71

Query: 61  LYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVS 120
           LYVA  + V CF+EGYCWTRT ERQ SRMR +YLRAVLRQ+VGYFDLHVTSTS+VITSVS
Sbjct: 72  LYVAGASLVICFVEGYCWTRTGERQASRMREKYLRAVLRQDVGYFDLHVTSTSDVITSVS 131

Query: 121 NDTLVIQDVLSEMVKDPKLPN 141
           +DTLVIQDVLSE     KLPN
Sbjct: 132 SDTLVIQDVLSE-----KLPN 147

[Close]

BLAST of Moc04g35960 vs. ExPASy TrEMBL
Match: A0A6J1BVS2 (LOW QUALITY PROTEIN: ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111006157 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 8.5e-65
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASSSHSFQTNINQNAVALL 60
           MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASSSHSFQTNINQNAVALL
Sbjct: 24  MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASSSHSFQTNINQNAVALL 83

Query: 61  YVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVSN 120
           YVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVSN
Sbjct: 84  YVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVSN 143

Query: 121 DTLVIQDVLSEMV 134
           DTLVIQDVLSEM+
Sbjct: 144 DTLVIQDVLSEMI 156

[Close]

BLAST of Moc04g35960 vs. ExPASy TrEMBL
Match: A0A6J1BWU3 (ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111006245 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 117/146 (80.14%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASS------SHSFQTNINQ 60
           MHADAVDKFLMALGFIGA+GDGLT+P + ++SSRLMNNIGFASS      SHSFQTNI++
Sbjct: 30  MHADAVDKFLMALGFIGAMGDGLTTPLVLVVSSRLMNNIGFASSSDPSDISHSFQTNIDK 89

Query: 61  NAVALLYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEV 120
           NAVALLYVAC  F+ACFLEGYCWTRT ERQ++RMRARYLRAVLRQEVGYFDLHVTSTSEV
Sbjct: 90  NAVALLYVACGGFLACFLEGYCWTRTGERQSARMRARYLRAVLRQEVGYFDLHVTSTSEV 149

Query: 121 ITSVSNDTLVIQDVLSEMVKDPKLPN 141
           ITSVSND+LVIQDV SE     K+PN
Sbjct: 150 ITSVSNDSLVIQDVFSE-----KIPN 170

[Close]

BLAST of Moc04g35960 vs. ExPASy TrEMBL
Match: A0A1S3C8H4 (ABC transporter B family member 15-like OS=Cucumis melo OX=3656 GN=LOC103498038 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 5.3e-51
Identity = 110/144 (76.39%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASS----SHSFQTNINQNA 60
           MHADAVDKFLM LGFIGA+GDGLT+P + ++SSRLMNNIG  SS    + SF TNI++NA
Sbjct: 31  MHADAVDKFLMTLGFIGAIGDGLTTPLVLVVSSRLMNNIGHTSSASSITDSFVTNIDKNA 90

Query: 61  VALLYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVIT 120
           VALLYVAC  FVACFLEGYCWTRT ERQ +RMRARYL+AVLRQ+VGYFDLHVTSTSEVIT
Sbjct: 91  VALLYVACGGFVACFLEGYCWTRTGERQAARMRARYLKAVLRQDVGYFDLHVTSTSEVIT 150

Query: 121 SVSNDTLVIQDVLSEMVKDPKLPN 141
           SVSND+L+IQDVLSE     K+PN
Sbjct: 151 SVSNDSLIIQDVLSE-----KIPN 169

[Close]

BLAST of Moc04g35960 vs. ExPASy TrEMBL
Match: A0A6J1JR61 (ABC transporter B family member 15-like OS=Cucurbita maxima OX=3661 GN=LOC111487603 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 4.5e-50
Identity = 109/143 (76.22%), Postives = 122/143 (85.31%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASS---SHSFQTNINQNAV 60
           MHADAVDKFLM LGFIGA+GDG T+P + I+SSRLMNNIG  SS   + SF TN+++NAV
Sbjct: 26  MHADAVDKFLMTLGFIGAMGDGFTTPLVLIVSSRLMNNIGATSSNSPTESFVTNVDKNAV 85

Query: 61  ALLYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITS 120
           ALLYVAC  FVACFLEGYCWTRT ERQ +RMRARYL+AVLRQ+VGYFDLHVTSTSEVITS
Sbjct: 86  ALLYVACGGFVACFLEGYCWTRTGERQAARMRARYLKAVLRQDVGYFDLHVTSTSEVITS 145

Query: 121 VSNDTLVIQDVLSEMVKDPKLPN 141
           VSND+LVIQDV SE     K+PN
Sbjct: 146 VSNDSLVIQDVFSE-----KIPN 163

[Close]

BLAST of Moc04g35960 vs. ExPASy TrEMBL
Match: A0A0A0KU14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633170 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.0e-49
Identity = 109/143 (76.22%), Postives = 121/143 (84.62%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASSS---HSFQTNINQNAV 60
           MHADAVDKFLM LGFIGAVGDG T+P + ++SS LMNNIG  SSS    SF  NI++NAV
Sbjct: 31  MHADAVDKFLMTLGFIGAVGDGFTTPLVLVVSSHLMNNIGHTSSSSITDSFVANIDKNAV 90

Query: 61  ALLYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITS 120
           ALLYVAC  FV+CFLEGYCWTRT ERQ +RMRARYL+AVLRQ+VGYFDLHVTSTSEVITS
Sbjct: 91  ALLYVACGGFVSCFLEGYCWTRTGERQAARMRARYLKAVLRQDVGYFDLHVTSTSEVITS 150

Query: 121 VSNDTLVIQDVLSEMVKDPKLPN 141
           VSND+LVIQDVLSE     K+PN
Sbjct: 151 VSNDSLVIQDVLSE-----KIPN 168

[Close]

BLAST of Moc04g35960 vs. TAIR 10
Match: AT3G28345.1 (ABC transporter family protein )

HSP 1 Score: 185.7 bits (470), Expect = 4.6e-47
Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFAS-SSHSFQTNINQNAVAL 60
           MHAD VD  LM LG IGAVGDG T+P + +++S+LMNNIG +S ++ +F  +I++N+VAL
Sbjct: 25  MHADGVDWLLMGLGLIGAVGDGFTTPLVLLITSKLMNNIGGSSFNTDTFMQSISKNSVAL 84

Query: 61  LYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVS 120
           LYVAC ++V CFLEGYCWTRT ERQT+RMR +YLRAVLRQ+VGYFDLHVTSTS+VITSVS
Sbjct: 85  LYVACGSWVVCFLEGYCWTRTGERQTARMREKYLRAVLRQDVGYFDLHVTSTSDVITSVS 144

Query: 121 NDTLVIQDVLSEMVKDPKLPN 141
           +D+ VIQDVLSE     KLPN
Sbjct: 145 SDSFVIQDVLSE-----KLPN 160

[Close]

BLAST of Moc04g35960 vs. TAIR 10
Match: AT3G28390.1 (P-glycoprotein 18 )

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-44
Identity = 90/141 (63.83%), Postives = 112/141 (79.43%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFAS-SSHSFQTNINQNAVAL 60
           MHAD VD  LMALG IGAVGDG  +P +F + S+L+NN+G +S    +F   + +NAVAL
Sbjct: 13  MHADGVDWMLMALGLIGAVGDGFITPIIFFICSKLLNNVGGSSFDDETFMQTVAKNAVAL 72

Query: 61  LYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVS 120
           +YVAC ++V CF+EGYCWTRT ERQ ++MR +YL+AVLRQ+VGYFDLHVTSTS+VITSVS
Sbjct: 73  VYVACASWVICFIEGYCWTRTGERQAAKMREKYLKAVLRQDVGYFDLHVTSTSDVITSVS 132

Query: 121 NDTLVIQDVLSEMVKDPKLPN 141
           +D+LVIQD LSE     KLPN
Sbjct: 133 SDSLVIQDFLSE-----KLPN 148

[Close]

BLAST of Moc04g35960 vs. TAIR 10
Match: AT3G28360.1 (P-glycoprotein 16 )

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-44
Identity = 90/141 (63.83%), Postives = 112/141 (79.43%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIG-FASSSHSFQTNINQNAVAL 60
           MHAD VD  LM LG IGAVGDG  +P LF +++ L+N+ G F+ +  +F   I++NA+A+
Sbjct: 12  MHADGVDWMLMGLGLIGAVGDGFITPILFFITAMLLNDFGSFSFNDETFMQPISKNALAM 71

Query: 61  LYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVS 120
           LYVAC ++V CFLEGYCWTRT ERQ ++MR RYLRAVLRQ+VGYFDLHVTSTS++ITSVS
Sbjct: 72  LYVACASWVICFLEGYCWTRTGERQAAKMRERYLRAVLRQDVGYFDLHVTSTSDIITSVS 131

Query: 121 NDTLVIQDVLSEMVKDPKLPN 141
           +D+LVIQD LSE     KLPN
Sbjct: 132 SDSLVIQDFLSE-----KLPN 147

[Close]

BLAST of Moc04g35960 vs. TAIR 10
Match: AT3G28380.1 (P-glycoprotein 17 )

HSP 1 Score: 176.4 bits (446), Expect = 2.8e-44
Identity = 92/141 (65.25%), Postives = 113/141 (80.14%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFASSSH-SFQTNINQNAVAL 60
           MHAD VD  LMALG IGAVGDG  +P +  + + L+NN+G +SS++ +F   I++N VAL
Sbjct: 25  MHADGVDWILMALGLIGAVGDGFITPVVVFIFNTLLNNLGTSSSNNKTFMQTISKNVVAL 84

Query: 61  LYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVS 120
           LYVAC ++V CFLEGYCWTRT ERQ +RMR +YLRAVLRQ+VGYFDLHVTSTS+VITS+S
Sbjct: 85  LYVACGSWVICFLEGYCWTRTGERQAARMREKYLRAVLRQDVGYFDLHVTSTSDVITSIS 144

Query: 121 NDTLVIQDVLSEMVKDPKLPN 141
           +D+LVIQD LSE     KLPN
Sbjct: 145 SDSLVIQDFLSE-----KLPN 160

[Close]

BLAST of Moc04g35960 vs. TAIR 10
Match: AT3G28415.1 (ABC transporter family protein )

HSP 1 Score: 144.4 bits (363), Expect = 1.2e-34
Identity = 85/141 (60.28%), Postives = 102/141 (72.34%), Query Frame = 0


Query: 1   MHADAVDKFLMALGFIGAVGDGLTSPFLFILSSRLMNNIGFAS-SSHSFQTNINQNAVAL 60
           MHA++VD  LM LG IGAVGDG  +P +F ++  L+N+IG +S    +F   I +NAVAL
Sbjct: 12  MHANSVDLVLMGLGLIGAVGDGFITPIIFFITGLLLNDIGDSSFGDKTFMHAIMKNAVAL 71

Query: 61  LYVACVAFVACFLEGYCWTRTAERQTSRMRARYLRAVLRQEVGYFDLHVTSTSEVITSVS 120
           LYVA  + V CF+         ERQ SRMR +YLRAVLRQ+VGYFDLHVTSTS+VITSVS
Sbjct: 72  LYVAGASLVICFV--------GERQASRMREKYLRAVLRQDVGYFDLHVTSTSDVITSVS 131

Query: 121 NDTLVIQDVLSEMVKDPKLPN 141
           +DTLVIQDVLSE     KLPN
Sbjct: 132 SDTLVIQDVLSE-----KLPN 139

The following BLAST results are available for this feature:

BLAST of Moc04g35960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133620.1	1.8e-64	99.25	LOW QUALITY PROTEIN: ABC transporter B family member 15-like [Momordica charanti...	[more]
XP_022133729.1	2.8e-54	80.14	ABC transporter B family member 15-like, partial [Momordica charantia]	[more]
XP_008458712.1	1.1e-50	76.39	PREDICTED: ABC transporter B family member 15-like [Cucumis melo]	[more]
XP_023517420.1	5.5e-50	76.22	ABC transporter B family member 15-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_038890487.1	7.1e-50	76.92	LOW QUALITY PROTEIN: ABC transporter B family member 15-like [Benincasa hispida]	[more]

BLAST of Moc04g35960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHD1	6.5e-46	68.09	ABC transporter B family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCB15 PE=...	[more]
Q9LSJ5	1.8e-43	63.83	ABC transporter B family member 18 OS=Arabidopsis thaliana OX=3702 GN=ABCB18 PE=...	[more]
Q9LSJ8	3.9e-43	63.83	ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=...	[more]
Q9LSJ6	3.9e-43	65.25	ABC transporter B family member 17 OS=Arabidopsis thaliana OX=3702 GN=ABCB17 PE=...	[more]
Q9LSJ2	7.4e-42	65.96	ABC transporter B family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCB22 PE=...	[more]

BLAST of Moc04g35960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVS2	8.5e-65	99.25	LOW QUALITY PROTEIN: ABC transporter B family member 15-like OS=Momordica charan...	[more]
A0A6J1BWU3	1.4e-54	80.14	ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3C8H4	5.3e-51	76.39	ABC transporter B family member 15-like OS=Cucumis melo OX=3656 GN=LOC103498038 ...	[more]
A0A6J1JR61	4.5e-50	76.22	ABC transporter B family member 15-like OS=Cucurbita maxima OX=3661 GN=LOC111487...	[more]
A0A0A0KU14	1.0e-49	76.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633170 PE=4 SV=1	[more]

BLAST of Moc04g35960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28345.1	4.6e-47	68.09	ABC transporter family protein	[more]
AT3G28390.1	1.3e-44	63.83	P-glycoprotein 18	[more]
AT3G28360.1	2.8e-44	63.83	P-glycoprotein 16	[more]
AT3G28380.1	2.8e-44	65.25	P-glycoprotein 17	[more]
AT3G28415.1	1.2e-34	60.28	ABC transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036640	ABC transporter type 1, transmembrane domain superfamily	GENE3D	1.20.1560.10	ABC transporter type 1, transmembrane domain	coord: 1..136 e-value: 1.6E-31 score: 111.1
IPR036640	ABC transporter type 1, transmembrane domain superfamily	SUPERFAMILY	90123	ABC transporter transmembrane region	coord: 7..132
IPR011527	ABC transporter type 1, transmembrane domain	PFAM	PF00664	ABC_membrane	coord: 12..133 e-value: 2.0E-21 score: 76.9
IPR011527	ABC transporter type 1, transmembrane domain	PROSITE	PS50929	ABC_TM1F	coord: 12..133 score: 18.732594
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..206
None	No IPR available	PANTHER	PTHR24221:SF476	ABC TRANSPORTER B FAMILY PROTEIN	coord: 7..134
IPR039421	Type 1 protein exporter	PANTHER	PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	coord: 7..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g35960.1	Moc04g35960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding