Moc04g34930 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g34930
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionSmall polypeptide DEVIL 11
Locationchr4: 26308154 .. 26308405 (+)
RNA-Seq ExpressionMoc04g34930
SyntenyMoc04g34930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCTGGTTGCTGCTGCTGATCCCCCCGGCCCCGGCACCGGCACCGGCCCCTTCTACTTCCATGACAAATGGAAGATGTCCAAGAAAGACCGCTCCGCCAACTCCAACTCCAACTCCAACTCCCACAGGAGGTGCTCCTTCACCAGAAAGTGCGCCCGATTGGTCAAGGAGCAGAGGGCCAGATTCTACATCATGCGCCGCTGCGTCACCATGCTCATCTGCTGGCACGATTACACCGATTCTTGA

mRNA sequence

ATGGCTTCCCTGGTTGCTGCTGCTGATCCCCCCGGCCCCGGCACCGGCACCGGCCCCTTCTACTTCCATGACAAATGGAAGATGTCCAAGAAAGACCGCTCCGCCAACTCCAACTCCAACTCCAACTCCCACAGGAGGTGCTCCTTCACCAGAAAGTGCGCCCGATTGGTCAAGGAGCAGAGGGCCAGATTCTACATCATGCGCCGCTGCGTCACCATGCTCATCTGCTGGCACGATTACACCGATTCTTGA

Coding sequence (CDS)

ATGGCTTCCCTGGTTGCTGCTGCTGATCCCCCCGGCCCCGGCACCGGCACCGGCCCCTTCTACTTCCATGACAAATGGAAGATGTCCAAGAAAGACCGCTCCGCCAACTCCAACTCCAACTCCAACTCCCACAGGAGGTGCTCCTTCACCAGAAAGTGCGCCCGATTGGTCAAGGAGCAGAGGGCCAGATTCTACATCATGCGCCGCTGCGTCACCATGCTCATCTGCTGGCACGATTACACCGATTCTTGA

Protein sequence

MASLVAAADPPGPGTGTGPFYFHDKWKMSKKDRSANSNSNSNSHRRCSFTRKCARLVKEQRARFYIMRRCVTMLICWHDYTDS
Homology
BLAST of Moc04g34930 vs. NCBI nr
Match: KGN51326.1 (hypothetical protein Csa_009192 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-21
Identity = 62/93 (66.67%), Postives = 68/93 (73.12%), Query Frame = 0

Query: 1  MASLVAAADPPGPGTGT---GPFYFHDKWKMSKKD---RSANSNS----NSNSHRRCSFT 60
          MAS+V A       T T    PFYF +KWK SKK+   RS  S+S     ++SHRRCSFT
Sbjct: 1  MASIVGATATTTTSTTTPTDPPFYFDEKWKFSKKEGLNRSTRSSSFPIIKNSSHRRCSFT 60

Query: 61 RKCARLVKEQRARFYIMRRCVTMLICWHDYTDS 84
          RKCARLVKEQRARFYIMRRCVTMLICWHDYTDS
Sbjct: 61 RKCARLVKEQRARFYIMRRCVTMLICWHDYTDS 93

BLAST of Moc04g34930 vs. NCBI nr
Match: KAG2730317.1 (hypothetical protein I3760_01G286500 [Carya illinoinensis] >KAG6670123.1 hypothetical protein CIPAW_01G289500 [Carya illinoinensis] >KAG6734853.1 hypothetical protein I3842_01G291100 [Carya illinoinensis])

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-21
Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 0

Query: 1  MASLVAAADPPGPGTGTGPFYFHDKWKMSKKDRSANSNSNS------NSHRRCSFTRKCA 60
          MAS ++++  P P     PFYF +KWK+SKK+ S+ S S+S      +SHRRC+FTRKCA
Sbjct: 1  MAS-ISSSTNPNPPPPPPPFYFDEKWKLSKKEGSSRSRSSSTPLMKTSSHRRCAFTRKCA 60

Query: 61 RLVKEQRARFYIMRRCVTMLICWHDYTDS 84
          RLVKEQRARFYIMRRCVTMLICW DY+DS
Sbjct: 61 RLVKEQRARFYIMRRCVTMLICWRDYSDS 88

BLAST of Moc04g34930 vs. NCBI nr
Match: KAG7998937.1 (hypothetical protein I3843_01G280700 [Carya illinoinensis])

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-21
Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 0

Query: 1  MASLVAAADPPGPGTGTGPFYFHDKWKMSKKDRSANSNSNS------NSHRRCSFTRKCA 60
          MAS ++++  P P     PFYF +KWK+SKK+ S+ S S+S      +SHRRC+FTRKCA
Sbjct: 1  MAS-ISSSTNPNPPPPPPPFYFDEKWKLSKKEGSSRSRSSSTPLMTTSSHRRCAFTRKCA 60

Query: 61 RLVKEQRARFYIMRRCVTMLICWHDYTDS 84
          RLVKEQRARFYIMRRCVTMLICW DY+DS
Sbjct: 61 RLVKEQRARFYIMRRCVTMLICWRDYSDS 88

BLAST of Moc04g34930 vs. NCBI nr
Match: KAF3433679.1 (hypothetical protein FNV43_RR24782 [Rhamnella rubrinervis])

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-21
Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 0

Query: 2  ASLVAAADPPGPGTG---TGPFYFHDKWKMSKKDRSANSNS-------NSNSHRRCSFTR 61
          ++  AAA    PG       PFYF +KWK+SKK+ S+ S S       NS+SHRRCSFTR
Sbjct: 7  STAAAAASAVSPGNAHPPPPPFYFDEKWKLSKKEASSRSRSSTCPLMKNSSSHRRCSFTR 66

Query: 62 KCARLVKEQRARFYIMRRCVTMLICWHDYTDS 84
          KCARLVKEQRARFYI+RRCVTMLICW DY+DS
Sbjct: 67 KCARLVKEQRARFYIVRRCVTMLICWRDYSDS 98

BLAST of Moc04g34930 vs. NCBI nr
Match: XP_022938385.1 (uncharacterized protein LOC111444651 [Cucurbita moschata] >KAG6578688.1 hypothetical protein SDJN03_23136, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016227.1 hypothetical protein SDJN02_21333, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 111.3 bits (277), Expect = 4.0e-21
Identity = 59/92 (64.13%), Postives = 65/92 (70.65%), Query Frame = 0

Query: 1  MASLVAAADPPGPGTGTG---PFYFHDKWKMSKKDRSANSNSNS------NSHRRCSFTR 60
          MASLV A       T T     FYF DKWK SKK+    + S+S      +SHRRCSFTR
Sbjct: 1  MASLVGATATASTATATATDPSFYFDDKWKTSKKEGLTRTRSSSFPLIKTSSHRRCSFTR 60

Query: 61 KCARLVKEQRARFYIMRRCVTMLICWHDYTDS 84
          KCARLV++QRARFYIMRRCVTMLICWHDYTDS
Sbjct: 61 KCARLVEQQRARFYIMRRCVTMLICWHDYTDS 92

BLAST of Moc04g34930 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-16
Identity = 46/80 (57.50%), Postives = 54/80 (67.50%), Query Frame = 0

Query: 15 TGTGPFYFHDKWKMSKKDRSA----------NSNSNSNSHRRCSFTRKCARLVKEQRARF 74
          T +G  +  +KWK+SKKD  A          +S+ N     RC+FTRKCARLVKEQRARF
Sbjct: 8  TRSGSVHLDEKWKLSKKDGGASRITRSSSTSSSSFNGKKQGRCAFTRKCARLVKEQRARF 67

Query: 75 YIMRRCVTMLICWHD-YTDS 84
          YIMRRCV MLICW D Y+DS
Sbjct: 68 YIMRRCVIMLICWRDNYSDS 87

BLAST of Moc04g34930 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-09
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 27 KMSKKDRSANSNSNSNSHR-------RCSFTRKCARLVKEQRARFYIMRRCVTMLICWHD 84
          ++SKK+   ++    N+ R       +  FTRKC RLVKEQRARFYIMRRCV MLICW D
Sbjct: 11 QLSKKESLGDNGGALNTTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTD 70

BLAST of Moc04g34930 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-08
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 29  SKKDRSANSNSNSNSHRRCSFTRKCARLVKEQRARFYIMRRCVTMLICWHDYTDS 84
           S+K+R ++S+S+S      S T+K + L KEQ+ARFYIMRRCV ML+CWH + DS
Sbjct: 67  SRKERRSSSSSSS------SITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGDS 115

BLAST of Moc04g34930 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.5e-07
Identity = 20/32 (62.50%), Postives = 29/32 (90.62%), Query Frame = 0

Query: 48 SFTRKCARLVKEQRARFYIMRRCVTMLICWHD 80
          +F +KC+ +VK+QRA+FYI+RRC+ ML+CWHD
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWHD 45

BLAST of Moc04g34930 vs. ExPASy Swiss-Prot
Match: F4HTB2 (Small polypeptide DEVIL 22 OS=Arabidopsis thaliana OX=3702 GN=DVL22 PE=3 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-06
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 0

Query: 48 SFTRKCARLVKEQRARFYIMRRCVTMLICWH 79
          +FT KCA LVKEQRAR YI+RRC TML CW+
Sbjct: 13 AFTSKCASLVKEQRARLYILRRCATMLCCWY 43

BLAST of Moc04g34930 vs. ExPASy TrEMBL
Match: A0A0A0KUB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517730 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.1e-22
Identity = 62/93 (66.67%), Postives = 68/93 (73.12%), Query Frame = 0

Query: 1  MASLVAAADPPGPGTGT---GPFYFHDKWKMSKKD---RSANSNS----NSNSHRRCSFT 60
          MAS+V A       T T    PFYF +KWK SKK+   RS  S+S     ++SHRRCSFT
Sbjct: 1  MASIVGATATTTTSTTTPTDPPFYFDEKWKFSKKEGLNRSTRSSSFPIIKNSSHRRCSFT 60

Query: 61 RKCARLVKEQRARFYIMRRCVTMLICWHDYTDS 84
          RKCARLVKEQRARFYIMRRCVTMLICWHDYTDS
Sbjct: 61 RKCARLVKEQRARFYIMRRCVTMLICWHDYTDS 93

BLAST of Moc04g34930 vs. ExPASy TrEMBL
Match: A0A6J1FJM7 (uncharacterized protein LOC111444651 OS=Cucurbita moschata OX=3662 GN=LOC111444651 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-21
Identity = 59/92 (64.13%), Postives = 65/92 (70.65%), Query Frame = 0

Query: 1  MASLVAAADPPGPGTGTG---PFYFHDKWKMSKKDRSANSNSNS------NSHRRCSFTR 60
          MASLV A       T T     FYF DKWK SKK+    + S+S      +SHRRCSFTR
Sbjct: 1  MASLVGATATASTATATATDPSFYFDDKWKTSKKEGLTRTRSSSFPLIKTSSHRRCSFTR 60

Query: 61 KCARLVKEQRARFYIMRRCVTMLICWHDYTDS 84
          KCARLV++QRARFYIMRRCVTMLICWHDYTDS
Sbjct: 61 KCARLVEQQRARFYIMRRCVTMLICWHDYTDS 92

BLAST of Moc04g34930 vs. ExPASy TrEMBL
Match: A0A5N6QDM8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_001452 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 3.3e-21
Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 0

Query: 1  MASLVAAADPPGPGTGTGPFYFHDKWKMSKKDRSANSNSN------SNSHRRCSFTRKCA 60
          MAS+ +A    GP     PFYF +KWK+SKK+ S+ S S+      S+SHRRCSF RKCA
Sbjct: 1  MASISSATTASGP----PPFYFDEKWKLSKKEGSSRSRSSTAPFMKSSSHRRCSFARKCA 60

Query: 61 RLVKEQRARFYIMRRCVTMLICWHDYTDS 84
          RLVKEQRARFYI+RRCVTMLICW DY+DS
Sbjct: 61 RLVKEQRARFYIVRRCVTMLICWRDYSDS 85

BLAST of Moc04g34930 vs. ExPASy TrEMBL
Match: A0A6A1VY14 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G014741 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.3e-21
Identity = 57/89 (64.04%), Postives = 67/89 (75.28%), Query Frame = 0

Query: 1  MASLVAAADPPGPGTGTGPFYFHDKWKMSKKDRSANSNSN------SNSHRRCSFTRKCA 60
          ++S  +A+ PP       PFYF +KWK+SKK+ S+ S S+      S+SHRRCSFTRKCA
Sbjct: 4  ISSGTSASAPP-------PFYFDEKWKLSKKEGSSRSRSSTTPFMKSSSHRRCSFTRKCA 63

Query: 61 RLVKEQRARFYIMRRCVTMLICWHDYTDS 84
          RLVKEQRARFYIMRRCVTMLICW DY DS
Sbjct: 64 RLVKEQRARFYIMRRCVTMLICWRDYGDS 85

BLAST of Moc04g34930 vs. ExPASy TrEMBL
Match: A0A7J6E7R9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012773 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.8e-20
Identity = 53/80 (66.25%), Postives = 61/80 (76.25%), Query Frame = 0

Query: 13  PGTGTGPFYFHDKWKMSKKDRSANSNSNS---------NSHRRCSFTRKCARLVKEQRAR 72
           P +   PFYF +KWK+SKK+  + S S+S         +SHRRCSFTRKCARLVKEQRAR
Sbjct: 21  PISAPPPFYFDEKWKLSKKESLSRSRSSSSCPLVKNSNSSHRRCSFTRKCARLVKEQRAR 80

Query: 73  FYIMRRCVTMLICWHDYTDS 84
           FYIMRRCVTMLICW DY+DS
Sbjct: 81  FYIMRRCVTMLICWRDYSDS 100

BLAST of Moc04g34930 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 )

HSP 1 Score: 86.3 bits (212), Expect = 1.3e-17
Identity = 46/80 (57.50%), Postives = 54/80 (67.50%), Query Frame = 0

Query: 15 TGTGPFYFHDKWKMSKKDRSA----------NSNSNSNSHRRCSFTRKCARLVKEQRARF 74
          T +G  +  +KWK+SKKD  A          +S+ N     RC+FTRKCARLVKEQRARF
Sbjct: 8  TRSGSVHLDEKWKLSKKDGGASRITRSSSTSSSSFNGKKQGRCAFTRKCARLVKEQRARF 67

Query: 75 YIMRRCVTMLICWHD-YTDS 84
          YIMRRCV MLICW D Y+DS
Sbjct: 68 YIMRRCVIMLICWRDNYSDS 87

BLAST of Moc04g34930 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 63.5 bits (153), Expect = 8.9e-11
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 27 KMSKKDRSANSNSNSNSHR-------RCSFTRKCARLVKEQRARFYIMRRCVTMLICWHD 84
          ++SKK+   ++    N+ R       +  FTRKC RLVKEQRARFYIMRRCV MLICW D
Sbjct: 11 QLSKKESLGDNGGALNTTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTD 70

BLAST of Moc04g34930 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 )

HSP 1 Score: 60.5 bits (145), Expect = 7.6e-10
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0

Query: 29  SKKDRSANSNSNSNSHRRCSFTRKCARLVKEQRARFYIMRRCVTMLICWHDYTDS 84
           S+K+R ++S+S+S      S T+K + L KEQ+ARFYIMRRCV ML+CWH + DS
Sbjct: 67  SRKERRSSSSSSS------SITQKYSSLAKEQKARFYIMRRCVAMLVCWHKHGDS 115

BLAST of Moc04g34930 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein )

HSP 1 Score: 55.1 bits (131), Expect = 3.2e-08
Identity = 20/32 (62.50%), Postives = 29/32 (90.62%), Query Frame = 0

Query: 48 SFTRKCARLVKEQRARFYIMRRCVTMLICWHD 80
          +F +KC+ +VK+QRA+FYI+RRC+ ML+CWHD
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWHD 45

BLAST of Moc04g34930 vs. TAIR 10
Match: AT1G53708.1 (ROTUNDIFOLIA like 9 )

HSP 1 Score: 53.9 bits (128), Expect = 7.1e-08
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 0

Query: 48 SFTRKCARLVKEQRARFYIMRRCVTMLICWH 79
          +FT KCA LVKEQRAR YI+RRC TML CW+
Sbjct: 13 AFTSKCASLVKEQRARLYILRRCATMLCCWY 43

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN51326.11.1e-2166.67hypothetical protein Csa_009192 [Cucumis sativus][more]
KAG2730317.12.4e-2164.04hypothetical protein I3760_01G286500 [Carya illinoinensis] >KAG6670123.1 hypothe... [more]
KAG7998937.12.4e-2164.04hypothetical protein I3843_01G280700 [Carya illinoinensis][more]
KAF3433679.12.4e-2163.04hypothetical protein FNV43_RR24782 [Rhamnella rubrinervis][more]
XP_022938385.14.0e-2164.13uncharacterized protein LOC111444651 [Cucurbita moschata] >KAG6578688.1 hypothet... [more]
Match NameE-valueIdentityDescription
Q8S8S31.8e-1657.50Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1[more]
Q6IM931.3e-0951.56Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1[more]
Q8L7D01.1e-0854.55Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1[more]
Q7XXN84.5e-0762.50Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1[more]
F4HTB21.0e-0674.19Small polypeptide DEVIL 22 OS=Arabidopsis thaliana OX=3702 GN=DVL22 PE=3 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0KUB05.1e-2266.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517730 PE=4 SV=1[more]
A0A6J1FJM71.9e-2164.13uncharacterized protein LOC111444651 OS=Cucurbita moschata OX=3662 GN=LOC1114446... [more]
A0A5N6QDM83.3e-2164.04Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_001452 PE=4 SV=1[more]
A0A6A1VY144.3e-2164.04Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G014741 PE=4 SV=1[more]
A0A7J6E7R94.8e-2066.25Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012773 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G39705.11.3e-1757.50ROTUNDIFOLIA like 8 [more]
AT3G55515.18.9e-1151.56ROTUNDIFOLIA like 7 [more]
AT2G29125.17.6e-1054.55ROTUNDIFOLIA like 2 [more]
AT2G36985.13.2e-0862.50DVL family protein [more]
AT1G53708.17.1e-0874.19ROTUNDIFOLIA like 9 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012552DVLPFAMPF08137DVLcoord: 58..76
e-value: 2.1E-12
score: 46.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR33102DVL19-RELATED-RELATEDcoord: 25..83
NoneNo IPR availablePANTHERPTHR33102:SF51ROTUNDIFOLIA-LIKE PROTEINcoord: 25..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g34930.1Moc04g34930.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008285 negative regulation of cell population proliferation
biological_process GO:0048367 shoot system development
cellular_component GO:0005886 plasma membrane