Moc04g33780 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g33780
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	amino acid transporter AVT1C-like
Location	chr4: 25487319 .. 25487971 (+)
RNA-Seq Expression	Moc04g33780
Synteny	Moc04g33780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCTGGAGGAGTTTATACCACCAAACCATGCCAAGACTCATATTTATTCCATGCTCATTAGAACAGCTCTTGTAATTTCCACCTTACTTGTCGGCCTTTCTCTCCCCTTTTTCGGTAAGTTAAGTTTATCTTCACGACTTTATTTCCATACCAATCTATGGTGAAGAAAAAGCTTCATTTTCTTCAATCACCTCTTGGCCTTGGCAAAATGAGTGAATCCTCACTTCCCAATGCAGGTCTTATGATGGCATTGATTGGATCGTTGTTAACAATGCTTGTGGTAAGTCTTTCTTCTGCAATGCAGTAAGTTTACTCGTCCGAGCTCTCGAGATCCTTCATTTCTGGTACTAACTCATTCATTAATGGCTGAACTATCAAATCTGTCTTGCAGACTTTAATACTCCCTTGTGTCTGTTACCTCAGCATTTTGAGGGGGAAAATAACATTTTTGCAGGTAAAAACTTCCTCTGCTTTCAAGAATTCGACTGATCAATTACATAACATCATTTTACGTAAAGACCTTTCTTTTCTTCTTTTTTCTCTACAGAGAGCACTTTGTCTAATAGTTATAACAGTAGGAGTTGTTGCGTCAGCATTTGGATCATATGCATCTCTCGAGAAAATCATTGAGAAATTGATGAGCGGCTGA

mRNA sequence

ATGAGTCTGGAGGAGTTTATACCACCAAACCATGCCAAGACTCATATTTATTCCATGCTCATTAGAACAGCTCTTGTAATTTCCACCTTACTTGTCGGCCTTTCTCTCCCCTTTTTCGGTCTTATGATGGCATTGATTGGATCGTTGTTAACAATGCTTGTGACTTTAATACTCCCTTGTGTCTGTTACCTCAGCATTTTGAGGGGGAAAATAACATTTTTGCAGAGAGCACTTTGTCTAATAGTTATAACAGTAGGAGTTGTTGCGTCAGCATTTGGATCATATGCATCTCTCGAGAAAATCATTGAGAAATTGATGAGCGGCTGA

Coding sequence (CDS)

ATGAGTCTGGAGGAGTTTATACCACCAAACCATGCCAAGACTCATATTTATTCCATGCTCATTAGAACAGCTCTTGTAATTTCCACCTTACTTGTCGGCCTTTCTCTCCCCTTTTTCGGTCTTATGATGGCATTGATTGGATCGTTGTTAACAATGCTTGTGACTTTAATACTCCCTTGTGTCTGTTACCTCAGCATTTTGAGGGGGAAAATAACATTTTTGCAGAGAGCACTTTGTCTAATAGTTATAACAGTAGGAGTTGTTGCGTCAGCATTTGGATCATATGCATCTCTCGAGAAAATCATTGAGAAATTGATGAGCGGCTGA

Protein sequence

MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPCVCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKLMSG

Homology

[Close]

BLAST of Moc04g33780 vs. NCBI nr
Match: XP_022134364.1 (amino acid transporter AVT1C-like [Momordica charantia])

HSP 1 Score: 194.1 bits (492), Expect = 6.1e-46
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC
Sbjct: 456 MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 515

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKLMSG 109
           VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKLMSG
Sbjct: 516 VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKLMSG 563

[Close]

BLAST of Moc04g33780 vs. NCBI nr
Match: XP_023550515.1 (amino acid transporter AVT1C-like [Cucurbita pepo subsp. pepo] >XP_023550517.1 amino acid transporter AVT1C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 92/105 (87.62%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEEFIPPNH KTHIYS+LIRTALVISTLLVGLS+PFFGLMM+LIGSLLTMLVTLILPC
Sbjct: 444 MSLEEFIPPNHPKTHIYSILIRTALVISTLLVGLSIPFFGLMMSLIGSLLTMLVTLILPC 503

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
            CYLSILRGK+TFLQ  LC IVI VGV+ASAFGSY+SL+KIIEKL
Sbjct: 504 ACYLSILRGKVTFLQITLCCIVIAVGVIASAFGSYSSLKKIIEKL 548

[Close]

BLAST of Moc04g33780 vs. NCBI nr
Match: XP_022938397.1 (amino acid transporter AVT1C-like [Cucurbita moschata] >XP_022938398.1 amino acid transporter AVT1C-like [Cucurbita moschata] >XP_022938399.1 amino acid transporter AVT1C-like [Cucurbita moschata])

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 92/105 (87.62%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEEFIPPNH KTHIYS+LIRTALVISTLLVGLS+PFFGLMM+LIGSLLTMLVTLILPC
Sbjct: 444 MSLEEFIPPNHPKTHIYSILIRTALVISTLLVGLSIPFFGLMMSLIGSLLTMLVTLILPC 503

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
            CYLSILRGK+TFLQ  LC IVI VGV+ASAFGSY+SL+KIIEKL
Sbjct: 504 ACYLSILRGKVTFLQITLCCIVIAVGVIASAFGSYSSLKKIIEKL 548

[Close]

BLAST of Moc04g33780 vs. NCBI nr
Match: XP_022993096.1 (amino acid transporter AVT1C-like [Cucurbita maxima] >XP_022993097.1 amino acid transporter AVT1C-like [Cucurbita maxima] >XP_022993098.1 amino acid transporter AVT1C-like [Cucurbita maxima])

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 92/105 (87.62%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEEFIPPNH KTHIYS+LIRTALVISTLLVGLS+PFFGLMM+LIGSLLTMLVTLILPC
Sbjct: 444 MSLEEFIPPNHPKTHIYSILIRTALVISTLLVGLSIPFFGLMMSLIGSLLTMLVTLILPC 503

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
            CYLSILRGK+TFLQ  LC IVI VGV+ASAFGSY+SL+KIIEKL
Sbjct: 504 ACYLSILRGKVTFLQITLCCIVIAVGVIASAFGSYSSLKKIIEKL 548

[Close]

BLAST of Moc04g33780 vs. NCBI nr
Match: KAG7016299.1 (Amino acid transporter AVT1C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-38
Identity = 92/105 (87.62%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEEFIPPNH KTHIYS+LIRTALVISTLLVGLS+PFFGLMM+LIGSLLTMLVTLILPC
Sbjct: 468 MSLEEFIPPNHPKTHIYSILIRTALVISTLLVGLSIPFFGLMMSLIGSLLTMLVTLILPC 527

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
            CYLSILRGK+TFLQ  LC IVI VGV+ASAFGSY+SL+KIIEKL
Sbjct: 528 ACYLSILRGKVTFLQITLCCIVIAVGVIASAFGSYSSLKKIIEKL 572

[Close]

BLAST of Moc04g33780 vs. ExPASy Swiss-Prot
Match: F4IUW3 (Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.6e-27
Identity = 66/105 (62.86%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEE IP  H ++H Y++ IRT LV STLLVGL++PFFGL+M+LIGSLLTMLVTLILP 
Sbjct: 444 MSLEELIPSRHIRSHWYAIGIRTLLVFSTLLVGLAIPFFGLVMSLIGSLLTMLVTLILPP 503

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
            C+LSI+R K+T  Q  LC+++I VG ++S  GSY++L KI+EKL
Sbjct: 504 ACFLSIVRRKVTPTQMMLCVLIIIVGAISSVIGSYSALSKIVEKL 548

[Close]

BLAST of Moc04g33780 vs. ExPASy Swiss-Prot
Match: F4JE35 (Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 8.6e-27
Identity = 65/105 (61.90%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEE IP N+ K+  Y++ IR+AL ISTLLVGL++PFFGL+M+LIGS LTML+TLILP 
Sbjct: 434 MSLEELIPSNYGKSRFYAIAIRSALAISTLLVGLAIPFFGLVMSLIGSFLTMLITLILPP 493

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
            C+LSILR K+T  Q  +C++++TVG V S  G+Y++L KIIEKL
Sbjct: 494 ACFLSILRKKVTPTQVTICILIMTVGAVCSVIGTYSALAKIIEKL 538

[Close]

BLAST of Moc04g33780 vs. ExPASy Swiss-Prot
Match: Q8GYS4 (Amino acid transporter AVT1D OS=Arabidopsis thaliana OX=3702 GN=AVT1D PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.6e-19
Identity = 52/105 (49.52%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEE IP    ++   S+L RT LV STL+V LS+PFF ++ ALIGS L MLV LI PC
Sbjct: 444 MSLEELIPTAKMRSRGVSILFRTMLVTSTLVVALSVPFFAIVAALIGSFLAMLVALIFPC 503

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
           +CYLSIL+GK++  Q  LC+ +I  GVV+   G+Y+++ ++  ++
Sbjct: 504 LCYLSILKGKLSNTQIGLCIFIIVFGVVSGCCGTYSAISRLANQM 548

[Close]

BLAST of Moc04g33780 vs. ExPASy Swiss-Prot
Match: Q8LPF4 (Amino acid transporter AVT1E OS=Arabidopsis thaliana OX=3702 GN=AVT1E PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-17
Identity = 46/107 (42.99%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHI--YSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLIL 60
           +SLEE IP +  K      SML RT LV+STL+V L++PFF  + ALIGS + ML+ LI 
Sbjct: 419 LSLEELIPSSSRKMRSKGVSMLFRTILVLSTLVVALTVPFFATVAALIGSFIAMLIALIF 478

Query: 61  PCVCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
           PC+CY+SI++G++T  Q  +C++++ +G+V+   G+Y+++ ++I ++
Sbjct: 479 PCLCYISIMKGRLTNFQIGICILIVIIGIVSGCCGTYSAIARLIGEM 525

[Close]

BLAST of Moc04g33780 vs. ExPASy Swiss-Prot
Match: Q1PER9 (Amino acid transporter AVT1G OS=Arabidopsis thaliana OX=3702 GN=AVT1G PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-15
Identity = 45/106 (42.45%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 1   MSLEE-FIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILP 60
           + LEE  +P    +++  S+ I+T LV+STL+V L+ PFF +M AL+GS L MLV  I P
Sbjct: 418 LGLEELMLPSEKMRSYGVSIFIKTILVLSTLVVALTFPFFAIMGALMGSFLAMLVDFIFP 477

Query: 61  CVCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
           C+CYLSIL+G+++  Q  +C+ +I  G+V+   G+Y+++ +++ KL
Sbjct: 478 CLCYLSILKGRLSKTQIGICVFIIISGIVSGCCGTYSAIGRLVGKL 523

[Close]

BLAST of Moc04g33780 vs. ExPASy TrEMBL
Match: A0A6J1BYK6 (amino acid transporter AVT1C-like OS=Momordica charantia OX=3673 GN=LOC111006645 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.0e-46
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC
Sbjct: 456 MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 515

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKLMSG 109
           VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKLMSG
Sbjct: 516 VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKLMSG 563

[Close]

BLAST of Moc04g33780 vs. ExPASy TrEMBL
Match: A0A6J1K167 (amino acid transporter AVT1C-like OS=Cucurbita maxima OX=3661 GN=LOC111489216 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.0e-39
Identity = 92/105 (87.62%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEEFIPPNH KTHIYS+LIRTALVISTLLVGLS+PFFGLMM+LIGSLLTMLVTLILPC
Sbjct: 444 MSLEEFIPPNHPKTHIYSILIRTALVISTLLVGLSIPFFGLMMSLIGSLLTMLVTLILPC 503

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
            CYLSILRGK+TFLQ  LC IVI VGV+ASAFGSY+SL+KIIEKL
Sbjct: 504 ACYLSILRGKVTFLQITLCCIVIAVGVIASAFGSYSSLKKIIEKL 548

[Close]

BLAST of Moc04g33780 vs. ExPASy TrEMBL
Match: A0A6J1FIS2 (amino acid transporter AVT1C-like OS=Cucurbita moschata OX=3662 GN=LOC111444660 PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.0e-39
Identity = 92/105 (87.62%), Postives = 99/105 (94.29%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEEFIPPNH KTHIYS+LIRTALVISTLLVGLS+PFFGLMM+LIGSLLTMLVTLILPC
Sbjct: 444 MSLEEFIPPNHPKTHIYSILIRTALVISTLLVGLSIPFFGLMMSLIGSLLTMLVTLILPC 503

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
            CYLSILRGK+TFLQ  LC IVI VGV+ASAFGSY+SL+KIIEKL
Sbjct: 504 ACYLSILRGKVTFLQITLCCIVIAVGVIASAFGSYSSLKKIIEKL 548

[Close]

BLAST of Moc04g33780 vs. ExPASy TrEMBL
Match: A0A0A0KG55 (Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G406020 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-37
Identity = 89/107 (83.18%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEEFIPPNH K+HIYS+LIRT LV STLLVGLS+PFFGLMM+LIGSLLTMLVTLILPC
Sbjct: 455 MSLEEFIPPNHPKSHIYSILIRTGLVFSTLLVGLSVPFFGLMMSLIGSLLTMLVTLILPC 514

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKLMS 108
           VCYLSILRGK+T LQRALC IVI VGVVASAFGS+++L+KI+E+L S
Sbjct: 515 VCYLSILRGKVTILQRALCCIVIAVGVVASAFGSFSALKKIVEELSS 561

[Close]

BLAST of Moc04g33780 vs. ExPASy TrEMBL
Match: A0A6J1H171 (amino acid transporter AVT1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459494 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.1e-36
Identity = 87/105 (82.86%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEEFIPPNH K+HIYS+LIRTALVISTLLVGLS+PFFGL+M+LIGSLLTMLVTLILPC
Sbjct: 481 MSLEEFIPPNHPKSHIYSILIRTALVISTLLVGLSIPFFGLVMSLIGSLLTMLVTLILPC 540

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
            CYL IL+ K+ FLQRALC IVI +G VASAFGSY+SL KIIEKL
Sbjct: 541 ACYLRILKEKVPFLQRALCFIVIAIGAVASAFGSYSSLRKIIEKL 585

[Close]

BLAST of Moc04g33780 vs. TAIR 10
Match: AT2G39130.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 121.3 bits (303), Expect = 4.7e-28
Identity = 66/105 (62.86%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEE IP  H ++H Y++ IRT LV STLLVGL++PFFGL+M+LIGSLLTMLVTLILP 
Sbjct: 444 MSLEELIPSRHIRSHWYAIGIRTLLVFSTLLVGLAIPFFGLVMSLIGSLLTMLVTLILPP 503

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
            C+LSI+R K+T  Q  LC+++I VG ++S  GSY++L KI+EKL
Sbjct: 504 ACFLSIVRRKVTPTQMMLCVLIIIVGAISSVIGSYSALSKIVEKL 548

[Close]

BLAST of Moc04g33780 vs. TAIR 10
Match: AT5G02180.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 94.7 bits (234), Expect = 4.7e-20
Identity = 52/105 (49.52%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILPC 60
           MSLEE IP    ++   S+L RT LV STL+V LS+PFF ++ ALIGS L MLV LI PC
Sbjct: 444 MSLEELIPTAKMRSRGVSILFRTMLVTSTLVVALSVPFFAIVAALIGSFLAMLVALIFPC 503

Query: 61  VCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
           +CYLSIL+GK++  Q  LC+ +I  GVV+   G+Y+++ ++  ++
Sbjct: 504 LCYLSILKGKLSNTQIGLCIFIIVFGVVSGCCGTYSAISRLANQM 548

[Close]

BLAST of Moc04g33780 vs. TAIR 10
Match: AT5G02170.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 90.5 bits (223), Expect = 8.9e-19
Identity = 46/107 (42.99%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 1   MSLEEFIPPNHAKTHI--YSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLIL 60
           +SLEE IP +  K      SML RT LV+STL+V L++PFF  + ALIGS + ML+ LI 
Sbjct: 419 LSLEELIPSSSRKMRSKGVSMLFRTILVLSTLVVALTVPFFATVAALIGSFIAMLIALIF 478

Query: 61  PCVCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
           PC+CY+SI++G++T  Q  +C++++ +G+V+   G+Y+++ ++I ++
Sbjct: 479 PCLCYISIMKGRLTNFQIGICILIVIIGIVSGCCGTYSAIARLIGEM 525

[Close]

BLAST of Moc04g33780 vs. TAIR 10
Match: AT3G09330.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-16
Identity = 45/106 (42.45%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 1   MSLEE-FIPPNHAKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILP 60
           + LEE  +P    +++  S+ I+T LV+STL+V L+ PFF +M AL+GS L MLV  I P
Sbjct: 418 LGLEELMLPSEKMRSYGVSIFIKTILVLSTLVVALTFPFFAIMGALMGSFLAMLVDFIFP 477

Query: 61  CVCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
           C+CYLSIL+G+++  Q  +C+ +I  G+V+   G+Y+++ +++ KL
Sbjct: 478 CLCYLSILKGRLSKTQIGICVFIIISGIVSGCCGTYSAIGRLVGKL 523

[Close]

BLAST of Moc04g33780 vs. TAIR 10
Match: AT3G09340.1 (Transmembrane amino acid transporter family protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-16
Identity = 44/106 (41.51%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 1   MSLEEFIPPNH-AKTHIYSMLIRTALVISTLLVGLSLPFFGLMMALIGSLLTMLVTLILP 60
           + LEE +PP+   +++  S+ I+T LV+STL+V L+ PFF +M AL+GS L  LV  I P
Sbjct: 418 LGLEELMPPSEKMRSYGVSIFIKTILVLSTLVVALTFPFFAIMGALMGSFLATLVDFIFP 477

Query: 61  CVCYLSILRGKITFLQRALCLIVITVGVVASAFGSYASLEKIIEKL 106
           C+CYLSIL+G+++  Q  +C+ +I  G+V+   G+Y+++ +++ +L
Sbjct: 478 CLCYLSILKGRLSKTQIGICVFIIISGIVSGCCGTYSAIGRLVGEL 523

The following BLAST results are available for this feature:

BLAST of Moc04g33780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134364.1	6.1e-46	100.00	amino acid transporter AVT1C-like [Momordica charantia]	[more]
XP_023550515.1	1.2e-38	87.62	amino acid transporter AVT1C-like [Cucurbita pepo subsp. pepo] >XP_023550517.1 a...	[more]
XP_022938397.1	1.2e-38	87.62	amino acid transporter AVT1C-like [Cucurbita moschata] >XP_022938398.1 amino aci...	[more]
XP_022993096.1	1.2e-38	87.62	amino acid transporter AVT1C-like [Cucurbita maxima] >XP_022993097.1 amino acid ...	[more]
KAG7016299.1	1.2e-38	87.62	Amino acid transporter AVT1C, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]

BLAST of Moc04g33780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IUW3	6.6e-27	62.86	Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1	[more]
F4JE35	8.6e-27	61.90	Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2	[more]
Q8GYS4	6.6e-19	49.52	Amino acid transporter AVT1D OS=Arabidopsis thaliana OX=3702 GN=AVT1D PE=2 SV=1	[more]
Q8LPF4	1.3e-17	42.99	Amino acid transporter AVT1E OS=Arabidopsis thaliana OX=3702 GN=AVT1E PE=2 SV=1	[more]
Q1PER9	2.0e-15	42.45	Amino acid transporter AVT1G OS=Arabidopsis thaliana OX=3702 GN=AVT1G PE=2 SV=1	[more]

BLAST of Moc04g33780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYK6	3.0e-46	100.00	amino acid transporter AVT1C-like OS=Momordica charantia OX=3673 GN=LOC111006645...	[more]
A0A6J1K167	6.0e-39	87.62	amino acid transporter AVT1C-like OS=Cucurbita maxima OX=3661 GN=LOC111489216 PE...	[more]
A0A6J1FIS2	6.0e-39	87.62	amino acid transporter AVT1C-like OS=Cucurbita moschata OX=3662 GN=LOC111444660 ...	[more]
A0A0A0KG55	1.5e-37	83.18	Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G406020 PE...	[more]
A0A6J1H171	2.1e-36	82.86	amino acid transporter AVT1C-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Moc04g33780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39130.1	4.7e-28	62.86	Transmembrane amino acid transporter family protein	[more]
AT5G02180.1	4.7e-20	49.52	Transmembrane amino acid transporter family protein	[more]
AT5G02170.1	8.9e-19	42.99	Transmembrane amino acid transporter family protein	[more]
AT3G09330.1	1.4e-16	42.45	Transmembrane amino acid transporter family protein	[more]
AT3G09340.1	1.9e-16	41.51	Transmembrane amino acid transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 13..97 e-value: 3.7E-13 score: 49.0
None	No IPR available	PANTHER	PTHR48017	OS05G0424000 PROTEIN-RELATED	coord: 1..104
None	No IPR available	PANTHER	PTHR48017:SF45	SUBFAMILY NOT NAMED	coord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g33780.1	Moc04g33780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006865	amino acid transport
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015293	symporter activity