Moc04g32510 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g32510
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	light-harvesting complex-like protein OHP2, chloroplastic
Location	chr4: 24453004 .. 24454267 (-)
RNA-Seq Expression	Moc04g32510
Synteny	Moc04g32510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGGGGCCTGTTCAATCCCCTTCGCGAAAACGCCGTCGCCGGCACCGTCGCCGTCGCCGTCGGCCGCTGCCTCTGCTTCTTCATCTTCCCCTCACGCTTCCATCAGATTCTCCTCCTCAAAGCCTTTCGTCTTCACCATTAGGAGCTCTCAGACCGAAGGCCCTCTCCGGAGACCCGCGGCCCCTTCTCTGAGAGAGCCGTCCCCGCCGCCATCTCTCACACCGACTCCTCCGTCGCAATCGCCTCCGCCTCCGCCGCCGTCGGCTCCTGTTGCTCAGTCGTCGATGCAGGCGTTTGCTGCTAAACAGGATAATGTGATCACGTTGGAGTTTCAGAGGCAGAAGGCCAAGGAGCTCCAGGAGTTTTTCAAGCAGAAGAAGCTTGAGGACGCCAATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCCAATGGGAGGTCAATTTCATTACCCCCTTTTCTCTCCCCAATTTTATCGATGATTATTAAATCTTGAAGCTAGATGTTCTCATGGGTGGTTTTGCTGTTTGTTTTGCGCAATTCGTGGCTGTTATAATTCTTCTGCAATTAAATTGAATTGATAATATTGCCTGCAATTCACTGCGTTTGGACAAATTCTTGATTAAGATGATTGTGAAACGAGATTAATTACCAAAATTTTCTTTGTTCATCATGCATCATCTTAGAATTACCATCAGGACAACGGGTCGATAAGTCCCACATTTAAAATGATTTGTAGTCGTAAAAAATTGCCTCCAGTTGGTTGCAAGTTTTGATTCTGTTCAAGTGCAAGTGCCTAAACTCTACATTTTTCAAGCAAGAAGCAGAATTACAAGAACTCTTCTTTATCTTTACGGATAATCAATCCACTTCCAAAATAGTTTGGAGACTCATTTTCTGCAATACTGCCTCTGTTTGAAAAACCATATCCATTGTGTTTTGTCCTGATTTTATTCAAACCTCAAGTGATCGATCCCTTATTCGATTTATCAATTTTATTCTTCAATACACGAAAATGGTCTGTACCTTGATTCCAGATTTTACTGAATCTCATACTTGCTTGTGGAAATCAGCAGTTCAGTTCCCTGGTTAAAGGTCTTGAGTTCACTACTCTTACTGGGTTGTTTTTCGCTAACAGGTGGGCAATGTTCGGTTTTGCTGTCGGAATGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTCCTCTCAAATTTTGGGATAGTAGATCTCGAATGA

mRNA sequence

ATGTCGGGGGCCTGTTCAATCCCCTTCGCGAAAACGCCGTCGCCGGCACCGTCGCCGTCGCCGTCGGCCGCTGCCTCTGCTTCTTCATCTTCCCCTCACGCTTCCATCAGATTCTCCTCCTCAAAGCCTTTCGTCTTCACCATTAGGAGCTCTCAGACCGAAGGCCCTCTCCGGAGACCCGCGGCCCCTTCTCTGAGAGAGCCGTCCCCGCCGCCATCTCTCACACCGACTCCTCCGTCGCAATCGCCTCCGCCTCCGCCGCCGTCGGCTCCTGTTGCTCAGTCGTCGATGCAGGCGTTTGCTGCTAAACAGGATAATGTGATCACGTTGGAGTTTCAGAGGCAGAAGGCCAAGGAGCTCCAGGAGTTTTTCAAGCAGAAGAAGCTTGAGGACGCCAATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCCAATGGGAGGTGGGCAATGTTCGGTTTTGCTGTCGGAATGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTCCTCTCAAATTTTGGGATAGTAGATCTCGAATGA

Coding sequence (CDS)

ATGTCGGGGGCCTGTTCAATCCCCTTCGCGAAAACGCCGTCGCCGGCACCGTCGCCGTCGCCGTCGGCCGCTGCCTCTGCTTCTTCATCTTCCCCTCACGCTTCCATCAGATTCTCCTCCTCAAAGCCTTTCGTCTTCACCATTAGGAGCTCTCAGACCGAAGGCCCTCTCCGGAGACCCGCGGCCCCTTCTCTGAGAGAGCCGTCCCCGCCGCCATCTCTCACACCGACTCCTCCGTCGCAATCGCCTCCGCCTCCGCCGCCGTCGGCTCCTGTTGCTCAGTCGTCGATGCAGGCGTTTGCTGCTAAACAGGATAATGTGATCACGTTGGAGTTTCAGAGGCAGAAGGCCAAGGAGCTCCAGGAGTTTTTCAAGCAGAAGAAGCTTGAGGACGCCAATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTCCAATGGGAGGTGGGCAATGTTCGGTTTTGCTGTCGGAATGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTCCTCTCAAATTTTGGGATAGTAGATCTCGAATGA

Protein sequence

MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

Homology

[Close]

BLAST of Moc04g32510 vs. NCBI nr
Match: XP_022133509.1 (light-harvesting complex-like protein OHP2, chloroplastic [Momordica charantia])

HSP 1 Score: 341.3 bits (874), Expect = 5.4e-90
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRP 60
           MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRP
Sbjct: 1   MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRP 60

Query: 61  AAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKEL 120
           AAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKEL
Sbjct: 61  AAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKEL 120

Query: 121 QEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSN 180
           QEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSN
Sbjct: 121 QEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSN 180

Query: 181 FGIVDLE 188
           FGIVDLE
Sbjct: 181 FGIVDLE 187

[Close]

BLAST of Moc04g32510 vs. NCBI nr
Match: XP_038884716.1 (light-harvesting complex-like protein OHP2, chloroplastic [Benincasa hispida])

HSP 1 Score: 258.8 bits (660), Expect = 3.5e-65
Identity = 152/196 (77.55%), Postives = 166/196 (84.69%), Query Frame = 0


Query: 1   MSGACSIPFAK--------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQ 60
           MSGACSIPFAK        +P+ A SPS SA++SASSSSPH S+RFSSSKPFVFTIRSSQ
Sbjct: 1   MSGACSIPFAKIKIPPPSSSPAAAVSPSASASSSASSSSPHTSLRFSSSKPFVFTIRSSQ 60

Query: 61  TEGPLRRPAAPSLREPSPPPSLTPTPP-SQSPPPPPPSAPVAQSSMQAFAAKQDNVITLE 120
           TEGPLRRPAAPSLREPSPP   +PTPP   +PPP  P +PV+         KQDNVITLE
Sbjct: 61  TEGPLRRPAAPSLREPSPPSPSSPTPPLKPTPPPQSPPSPVSP------VVKQDNVITLE 120

Query: 121 FQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFV 180
           FQRQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFV
Sbjct: 121 FQRQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFV 180

Query: 181 DQVKILLSNFGIVDLE 188
           DQVKILLSNFGIVDLE
Sbjct: 181 DQVKILLSNFGIVDLE 190

[Close]

BLAST of Moc04g32510 vs. NCBI nr
Match: KAG7032876.1 (Light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 258.5 bits (659), Expect = 4.6e-65
Identity = 151/194 (77.84%), Postives = 165/194 (85.05%), Query Frame = 0


Query: 1   MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQT 60
           MSGACS PFAK       + S A SPS SAA+S SSSS H+SIRFSSSKPFVFTIRSSQT
Sbjct: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQT 60

Query: 61  EGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQ 120
           +GP+RRPAAPSLREPSPP      PP   PPP   +APVAQSS +A+ AKQDN ITLEFQ
Sbjct: 61  DGPIRRPAAPSLREPSPP----SPPPPLKPPPSSATAPVAQSSGKAYVAKQDNTITLEFQ 120

Query: 121 RQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQ 180
           RQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIVDLE 188
           VKILLSNFGIVDL+
Sbjct: 181 VKILLSNFGIVDLD 190

[Close]

BLAST of Moc04g32510 vs. NCBI nr
Match: XP_023551626.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 1.3e-64
Identity = 152/194 (78.35%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 1   MSGACSIPFAKTPSPA-------PSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQT 60
           MSGACSIPFAK   PA        SPS SA +SASSSS H+SIRFSSSKPFVFTIRSSQT
Sbjct: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSSSAHSSIRFSSSKPFVFTIRSSQT 60

Query: 61  EGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQ 120
           EGPLRRPAAPSLREPSPP   +PTPP +  PPP  + P       A+AAK DNVITLEFQ
Sbjct: 61  EGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPP-----SPAYAAKLDNVITLEFQ 120

Query: 121 RQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQ 180
           RQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIVDLE 188
           VKILLSNFGIVDLE
Sbjct: 181 VKILLSNFGIVDLE 189

[Close]

BLAST of Moc04g32510 vs. NCBI nr
Match: XP_022963822.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 256.5 bits (654), Expect = 1.7e-64
Identity = 150/194 (77.32%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 1   MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQT 60
           MSGACS PFAK       + S A SPS SAA+S SSSS H+SIRFSSSKPFVFTIRSSQT
Sbjct: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQT 60

Query: 61  EGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQ 120
           +GP+RRPAAPSLREPSPP      PP   PPP   +APVAQ S +A+ AKQDN ITLEFQ
Sbjct: 61  DGPIRRPAAPSLREPSPP----SPPPPLKPPPSSATAPVAQPSGKAYVAKQDNTITLEFQ 120

Query: 121 RQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQ 180
           RQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIVDLE 188
           VKILLSNFGIVDL+
Sbjct: 181 VKILLSNFGIVDLD 190

[Close]

BLAST of Moc04g32510 vs. ExPASy Swiss-Prot
Match: Q9FEC1 (Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OHP2 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.2e-45
Identity = 113/166 (68.07%), Postives = 130/166 (78.31%), Query Frame = 0


Query: 24  AASASSSSPHASIRFS-SSKPFVFTIRSSQTEGPLRRPAA-PSLREPSPPPSLTPTPPSQ 83
           ++S+SSS+  +S RFS ++KP VF IR SQTEGPLRRP+A P+LREP  P  + P+ PS 
Sbjct: 16  SSSSSSSTASSSFRFSTTTKPCVFIIRCSQTEGPLRRPSAPPTLREPQKP--VPPSQPSS 75

Query: 84  SPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFI 143
           SPPP PP         +A A    +V T+EFQRQKAKELQE+FKQKKLE A QGPFFGF 
Sbjct: 76  SPPPSPP-------PQKAVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAAGQGPFFGFQ 135

Query: 144 GKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE 188
            KNEISNGRWAMFGFAVGMLTEYATGS+ VDQVKILLSNFGI+DLE
Sbjct: 136 PKNEISNGRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

[Close]

BLAST of Moc04g32510 vs. ExPASy TrEMBL
Match: A0A6J1BW66 (light-harvesting complex-like protein OHP2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006071 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.6e-90
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRP 60
           MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRP
Sbjct: 1   MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRP 60

Query: 61  AAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKEL 120
           AAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKEL
Sbjct: 61  AAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKEL 120

Query: 121 QEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSN 180
           QEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSN
Sbjct: 121 QEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSN 180

Query: 181 FGIVDLE 188
           FGIVDLE
Sbjct: 181 FGIVDLE 187

[Close]

BLAST of Moc04g32510 vs. ExPASy TrEMBL
Match: A0A6J1HG91 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464005 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.4e-65
Identity = 150/194 (77.32%), Postives = 164/194 (84.54%), Query Frame = 0


Query: 1   MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQT 60
           MSGACS PFAK       + S A SPS SAA+S SSSS H+SIRFSSSKPFVFTIRSSQT
Sbjct: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAASSTSSSSAHSSIRFSSSKPFVFTIRSSQT 60

Query: 61  EGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQ 120
           +GP+RRPAAPSLREPSPP      PP   PPP   +APVAQ S +A+ AKQDN ITLEFQ
Sbjct: 61  DGPIRRPAAPSLREPSPP----SPPPPLKPPPSSATAPVAQPSGKAYVAKQDNTITLEFQ 120

Query: 121 RQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQ 180
           RQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIVDLE 188
           VKILLSNFGIVDL+
Sbjct: 181 VKILLSNFGIVDLD 190

[Close]

BLAST of Moc04g32510 vs. ExPASy TrEMBL
Match: A0A6J1FIC8 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445596 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.4e-64
Identity = 151/194 (77.84%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 1   MSGACSIPFAKTPSPA-------PSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQT 60
           MSGACSIPFAK   PA        SPS SA +SASSSS H+SIRFSS+KPFVFTIRSSQT
Sbjct: 1   MSGACSIPFAKIKIPATSSSPATASPSASATSSASSSSAHSSIRFSSTKPFVFTIRSSQT 60

Query: 61  EGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQ 120
           EGPLRRPAAPSLREPSPP   +PTPP +  PPP  + P       A+AAK DNVITLEFQ
Sbjct: 61  EGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPP-----SPAYAAKLDNVITLEFQ 120

Query: 121 RQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQ 180
           RQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIVDLE 188
           VKILLSNFGIVDLE
Sbjct: 181 VKILLSNFGIVDLE 189

[Close]

BLAST of Moc04g32510 vs. ExPASy TrEMBL
Match: A0A6J1K1U3 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489352 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.7e-63
Identity = 150/194 (77.32%), Postives = 161/194 (82.99%), Query Frame = 0


Query: 1   MSGACSIPFAKTPSPA-------PSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQT 60
           MSGACSIPFAK   PA        SPS SA +SASSSS H+SIRFSSSKPFVFTIRSSQT
Sbjct: 1   MSGACSIPFAKIKIPAASSSPATASPSASATSSASSSSAHSSIRFSSSKPFVFTIRSSQT 60

Query: 61  EGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQ 120
           EGPLRRPAAPSLREPSPP   +PTPP +  PP   + P       A+AAK DNVITLEFQ
Sbjct: 61  EGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPSSQTPP-----SPAYAAKLDNVITLEFQ 120

Query: 121 RQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQ 180
           RQKAKELQE+FKQKKL++ +QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEDDQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIVDLE 188
           VKILLSNFGIVDLE
Sbjct: 181 VKILLSNFGIVDLE 189

[Close]

BLAST of Moc04g32510 vs. ExPASy TrEMBL
Match: A0A6J1JS47 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487322 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.0e-62
Identity = 146/194 (75.26%), Postives = 161/194 (82.99%), Query Frame = 0


Query: 1   MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQT 60
           MSGACS PFAK       + S A SPS SA +S SSSS H+SIRFSSSKPFVFTIRSSQT
Sbjct: 1   MSGACSFPFAKIKIPTVSSSSAAVSPSASAVSSTSSSSAHSSIRFSSSKPFVFTIRSSQT 60

Query: 61  EGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQ 120
           +GP+RRPAAPSLREPSPP      PP   P P   +AP +Q S +A+ AKQDN ITLEFQ
Sbjct: 61  DGPIRRPAAPSLREPSPP----SPPPPLKPTPTSATAPFSQPSAKAYVAKQDNTITLEFQ 120

Query: 121 RQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQ 180
           RQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQ
Sbjct: 121 RQKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQ 180

Query: 181 VKILLSNFGIVDLE 188
           VKILLSNFGIVDL+
Sbjct: 181 VKILLSNFGIVDLD 190

[Close]

BLAST of Moc04g32510 vs. TAIR 10
Match: AT1G34000.1 (one-helix protein 2 )

HSP 1 Score: 183.0 bits (463), Expect = 2.3e-46
Identity = 113/166 (68.07%), Postives = 130/166 (78.31%), Query Frame = 0


Query: 24  AASASSSSPHASIRFS-SSKPFVFTIRSSQTEGPLRRPAA-PSLREPSPPPSLTPTPPSQ 83
           ++S+SSS+  +S RFS ++KP VF IR SQTEGPLRRP+A P+LREP  P  + P+ PS 
Sbjct: 16  SSSSSSSTASSSFRFSTTTKPCVFIIRCSQTEGPLRRPSAPPTLREPQKP--VPPSQPSS 75

Query: 84  SPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFI 143
           SPPP PP         +A A    +V T+EFQRQKAKELQE+FKQKKLE A QGPFFGF 
Sbjct: 76  SPPPSPP-------PQKAVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAAGQGPFFGFQ 135

Query: 144 GKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE 188
            KNEISNGRWAMFGFAVGMLTEYATGS+ VDQVKILLSNFGI+DLE
Sbjct: 136 PKNEISNGRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

The following BLAST results are available for this feature:

BLAST of Moc04g32510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133509.1	5.4e-90	100.00	light-harvesting complex-like protein OHP2, chloroplastic [Momordica charantia]	[more]
XP_038884716.1	3.5e-65	77.55	light-harvesting complex-like protein OHP2, chloroplastic [Benincasa hispida]	[more]
KAG7032876.1	4.6e-65	77.84	Light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita argyrosperm...	[more]
XP_023551626.1	1.3e-64	78.35	light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp....	[more]
XP_022963822.1	1.7e-64	77.32	light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata]	[more]

BLAST of Moc04g32510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FEC1	3.2e-45	68.07	Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of Moc04g32510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BW66	2.6e-90	100.00	light-harvesting complex-like protein OHP2, chloroplastic OS=Momordica charantia...	[more]
A0A6J1HG91	8.4e-65	77.32	light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata ...	[more]
A0A6J1FIC8	1.4e-64	77.84	light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata ...	[more]
A0A6J1K1U3	2.7e-63	77.32	light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A6J1JS47	1.0e-62	75.26	light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX...	[more]

BLAST of Moc04g32510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34000.1	2.3e-46	68.07	one-helix protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 86..180 e-value: 2.4E-5 score: 26.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..95
None	No IPR available	PANTHER	PTHR14154:SF83	MYB-LIKE PROTEIN U	coord: 1..186
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 1..186
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 116..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g32510.1	Moc04g32510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006850	mitochondrial pyruvate transmembrane transport
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0050833	pyruvate transmembrane transporter activity