Moc04g32140 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g32140
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionTy3-gypsy retrotransposon protein
Locationchr4: 24142007 .. 24144852 (+)
RNA-Seq ExpressionMoc04g32140
SyntenyMoc04g32140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCAGATCGAAATTCAAGATGTTGCAAATGTTGCTGAGTCAAGCCAAAATCAAATTGCGAAAGTCAGCGACAAAAGAAAGAACATCATGCAAGAAGGACAACTGGAACACTCTGTTTCAATTGCTTCACTATCTGTCCGGCAGCTCCAAGATATGATCACAAATTCGATCAGAGCTCAGTACGGCGGACCTTCTCAAAGCTCCCTCACGTACTCGAAACCGTACACCAAGAGGATCAAAAACTTGATAATGCCTGTGGGATATCAGCCTCCAAAGTTCCAACAATTTGACGGAAAAGGCAATCCTAAGCAACATATTGCTCATTTCGTTGAGACATATGAAAATGCTGGCACTCGAGGAGATCTACTCGTCAAACAATTTGTCCGAACACTAAAGGGCAATGCTTTTGACTGGTACACAGATCTGGAGCCTGAGTCCATCAACGGTTGGGAGCAATTGGAAAGAGAGTTCTTAAATCGGTTCTACAGCACAAGGCGAATCGTAAGCATGGGAACTCACCAACACTAAGCAACAAAAAGATGAATCTGTTGTTGATTACATCAATAGGTGGAGAGCTGTGACCGCAGTATTGTAATTTTTCAATAAAAAAAAAAGAAAAAAAAATAATAATTAAGATATCTTAGTTGGAAGGGTAGTTTGGTCTTTTGACAAGAAAACAAAACATGGGACACGTGTGTGTGTTGTGACGTGTTTAAAAAAAAAGAAAAAGAATAGGAAAGGGAAAGGGGAGAAAACGAACGAGGAAAAACAAAGAGAATGGAAAAGAAAGAGGGCAAGGAGAAGAGAAGAAACCAGAGGGGAAAGGAGAAGAAATTGAAGGTAAGGTTTGTATTTATGGGTTTTGTGAAAAATGTCATGAGAAGTTTGAGTTCTATGGGTATTCAATGAACGGAAAACTCATGTTGTTCTTGGATGAGAAGGAATGGTAAACTCGTGGGGTTCGATTTTGCAAAGGATGTATGTTTTGGTTGAATTTTAGGGTGGAAATATTATGAGGGAACGTTGGTATTGTGATGAGTTTTTTTTGGTAAAGAAGGGTTCCATGGGAGAAAGAAAGGCAAAAGAAAGGCAAAAGAAGTGCAGATTTAAGGTGGGTATGGAATCTGTAGAAGAAGGGAAGAGAGAGAGGAGTGTGGGGGTTGGTGTTGAAGAGAGAGAAAGAAATCAAGGAGAGAGGTAATTGATAAATTAAGGTAAAAAAAAATAAAAGGAATGGGTATATGTGCGTGAGATGGAGTGTGAGAAAGAGAAATTGATTCGGTTTGGTGGGACCCACTTGTAAGAAGGAAAAGTTGTGAGTTTTAATGAAGAGAGAGAGTGAGGAAATTGGGTAATAGGATATTTTGAAGTTATTATGATTCAAGTTTGAATTAAGTTATGTTGAAATTGGAATTAAGTGAGTTAAATTGGTTTTGAAACGATATTTCAGGTCATACAGGAATTGGAACAGCGTACCAACCAAATTCACCTCGTTCATAGGATTTGTGAGTGGTTATTTTACTAAATATTTCCAGATATCTATTATAGAACCTCAAGAAAAATATATAACGTATGTTTGATTATTTTTGCTGAGAAATTGAATTTTGCTGAGAATGTCTGAGAAATTGTTGTGTTTACTGAATATGATTAGAAAGAAATATGTTTAGAAGTGATTTGTGATAGAAATGTTCTTAGAAAGAAAGGAAAAAAAAAAGAATTTTTAGAACTGTTATTGAGATTGAGAATTTTCTGAGAATCGTTTTCAAACCACCATATTGTTGTATCCAGGTGATTACCCGTATGCTATGTGAATGTGTTTCTATAGTATACCCAGAAATAGAAGGTCTTTGGGACCATTTTACTCCGCGCGTTGAGAGAAATATTCTGCTGTGTATATTGAGATTACTCTATGCCAGTGGACCAGAAATAGAGTTATTCTGCTGTGCGTATTGAGATTACTCTGCGCTAGTAGACCAGAATAAAATGTGGATACATATATGGTGTTGAGTTTTCTTAATCTGTTTTAGGTTTGAAAGAAGATATTTGATATGTGTTTCAAAAAGTGTTTTTAGGAAGTATATGTTGTTATAAGTTATGCTCAGAAAATTACTGAATTTTAGTTGCTCAAGTTATATGAAGTTTTAACGAGAATGTTTATTATTTCAGCTTTATGAAGCTCGACTTGAGAATTGAAATTTCAGTTGTTTTTATGGAATAAGTTTTACGAAATTATTTTCTTAATAAAATGCCACTCACTGAGCTTCCTAGCTCACTGTTTATAATTGTTTTCCTCCTCCAGGCTGCACCTGAGTTTCATAGAGATAGCCAACCAGTTTCTGCCACTCACCGTCTCAAATTTGCATATCATTTTGTATGTACAACTAGAATGACTTATACTAGAATAGTTAAGACCTTTTGTGGCCGAATAGTTATTTGTTTTTAAATGAATTATGTTACACTTTATGTTTTATATGTTGAAGAATAATCTAAATTAGTTTTAGAAAGTTAGAAAGAATTTGACTATAGACTTGGTAGATGGTTGGGGGTCTGTGGTCGGCACGACTTGTCCTATAGTTAGTAGGTGTTTAGGGCGGGTCGTGTCAAGAGCTTTGAGTCTCGACTGCAAAGATCGACTAATGGAATTATCTGCTATCGAGTTGTGCATTCAAGGTATGCATTGGGGACTTCTCTACATCCTTCAAGGAATAAAACCTCGCACGTTTGAAGAATTAGCAACCCGTGCCCACGACATGAAGCTAAGTATTGGTAATCGAGGAGATAAAGATCTTTTAGTCCCTAACTTAAAGAGAATGAGCAAGAATGCTGAGACGACTCTTGAATAA

mRNA sequence

ATGAACCAGATCGAAATTCAAGATGTTGCAAATGTTGCTGAGTCAAGCCAAAATCAAATTGCGAAAGTCAGCGACAAAAGAAAGAACATCATGCAAGAAGGACAACTGGAACACTCTGTTTCAATTGCTTCACTATCTGTCCGGCAGCTCCAAGATATGATCACAAATTCGATCAGAGCTCAGTACGGCGGACCTTCTCAAAGCTCCCTCACGTACTCGAAACCGTACACCAAGAGGATCAAAAACTTGATAATGCCTGTGGGATATCAGCCTCCAAAGTTCCAACAATTTGACGGAAAAGGCAATCCTAAGCAACATATTGCTCATTTCGTTGAGACATATGAAAATGCTGGCACTCGAGGAGATCTACTCGTCAAACAATTTGTCCGAACACTAAAGGGCAATGCTTTTGACTGGTACACAGATCTGGAGCCTGAGTCCATCAACGGTTGGGAGCAATTGGAAAGAGAGTTCTTAAATCGGTTCTACAGCACAAGGCGAATCGGTGGAAATATTATGAGGGAACGTTGGTATTGTGATGAGTTTTTTTTGGTAAAGAAGGGTTCCATGGGAGAAAGAAAGGCAAAAGAAAGGCAAAAGAAGTGCAGATTTAAGGTGGGTATGGAATCTGTAGAAGAAGGGAAGAGAGAGAGGAGTGTGGGGGTTGGTGTTGAAGAGAGAGAAAGAAATCAAGGAGAGAGGTGTTTAGGGCGGGTCGTGTCAAGAGCTTTGAGTCTCGACTGCAAAGATCGACTAATGGAATTATCTGCTATCGAGTTGTGCATTCAAGGTATGCATTGGGGACTTCTCTACATCCTTCAAGGAATAAAACCTCGCACGTTTGAAGAATTAGCAACCCGTGCCCACGACATGAAGCTAAGTATTGGTAATCGAGGAGATAAAGATCTTTTAGTCCCTAACTTAAAGAGAATGAGCAAGAATGCTGAGACGACTCTTGAATAA

Coding sequence (CDS)

ATGAACCAGATCGAAATTCAAGATGTTGCAAATGTTGCTGAGTCAAGCCAAAATCAAATTGCGAAAGTCAGCGACAAAAGAAAGAACATCATGCAAGAAGGACAACTGGAACACTCTGTTTCAATTGCTTCACTATCTGTCCGGCAGCTCCAAGATATGATCACAAATTCGATCAGAGCTCAGTACGGCGGACCTTCTCAAAGCTCCCTCACGTACTCGAAACCGTACACCAAGAGGATCAAAAACTTGATAATGCCTGTGGGATATCAGCCTCCAAAGTTCCAACAATTTGACGGAAAAGGCAATCCTAAGCAACATATTGCTCATTTCGTTGAGACATATGAAAATGCTGGCACTCGAGGAGATCTACTCGTCAAACAATTTGTCCGAACACTAAAGGGCAATGCTTTTGACTGGTACACAGATCTGGAGCCTGAGTCCATCAACGGTTGGGAGCAATTGGAAAGAGAGTTCTTAAATCGGTTCTACAGCACAAGGCGAATCGGTGGAAATATTATGAGGGAACGTTGGTATTGTGATGAGTTTTTTTTGGTAAAGAAGGGTTCCATGGGAGAAAGAAAGGCAAAAGAAAGGCAAAAGAAGTGCAGATTTAAGGTGGGTATGGAATCTGTAGAAGAAGGGAAGAGAGAGAGGAGTGTGGGGGTTGGTGTTGAAGAGAGAGAAAGAAATCAAGGAGAGAGGTGTTTAGGGCGGGTCGTGTCAAGAGCTTTGAGTCTCGACTGCAAAGATCGACTAATGGAATTATCTGCTATCGAGTTGTGCATTCAAGGTATGCATTGGGGACTTCTCTACATCCTTCAAGGAATAAAACCTCGCACGTTTGAAGAATTAGCAACCCGTGCCCACGACATGAAGCTAAGTATTGGTAATCGAGGAGATAAAGATCTTTTAGTCCCTAACTTAAAGAGAATGAGCAAGAATGCTGAGACGACTCTTGAATAA

Protein sequence

MNQIEIQDVANVAESSQNQIAKVSDKRKNIMQEGQLEHSVSIASLSVRQLQDMITNSIRAQYGGPSQSSLTYSKPYTKRIKNLIMPVGYQPPKFQQFDGKGNPKQHIAHFVETYENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESINGWEQLEREFLNRFYSTRRIGGNIMRERWYCDEFFLVKKGSMGERKAKERQKKCRFKVGMESVEEGKRERSVGVGVEERERNQGERCLGRVVSRALSLDCKDRLMELSAIELCIQGMHWGLLYILQGIKPRTFEELATRAHDMKLSIGNRGDKDLLVPNLKRMSKNAETTLE
Homology
BLAST of Moc04g32140 vs. NCBI nr
Match: XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 2.9e-91
Identity = 188/311 (60.45%), Postives = 213/311 (68.49%), Query Frame = 0

Query: 5   EIQDVANVAESSQNQIAKVSDKRKNIMQEGQ-LEHSVSIASLSVRQLQDMITNSIRAQYG 64
           E       AESSQ  + KV DK KN++QE Q  + S S+ASLSV+QLQDMITNSIRAQYG
Sbjct: 121 EQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNSIRAQYG 180

Query: 65  GPSQSSLTYSKPYTKRIKNLIMPVGYQPPKFQQFDGKGNPKQHIAHFVETYENAGTRGDL 124
           GPSQ+S  YSKPYTKRI NL MP+GYQPPKFQQFDGKGNPKQH+AHFVET ENAG+RGD 
Sbjct: 181 GPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQ 240

Query: 125 LVKQFVRTLKGNAFDWYTDLEPESINGWEQLEREFLNRFYSTRRIGGNIMRERWYCDEFF 184
           LV+QFVR+LKGNAF+WYTDLEPESI  WEQLE+EFLNRFYSTRR                
Sbjct: 241 LVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRR---------------- 300

Query: 185 LVKKGSMGERKAKERQKKCRFKVGMESVEEGKRERSVGVGVEERERNQGERCLGRVVS-R 244
                                 V M  +   K+ +             GE  +  +   R
Sbjct: 301 ---------------------TVSMMELTNTKQRK-------------GEPVIDYINRWR 360

Query: 245 ALSLDCKDRLMELSAIELCIQGMHWGLLYILQGIKPRTFEELATRAHDMKLSIGNRGDKD 304
           ALSLDCKDRL ELSA+E+C QGMHWGLLYILQGIKPRTFEELATRAHDM+LSI +RG KD
Sbjct: 361 ALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKD 381

Query: 305 LLVPNLKRMSK 314
            LVP +K+  K
Sbjct: 421 FLVPEVKKDKK 381

BLAST of Moc04g32140 vs. NCBI nr
Match: XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 2.9e-91
Identity = 188/311 (60.45%), Postives = 213/311 (68.49%), Query Frame = 0

Query: 5   EIQDVANVAESSQNQIAKVSDKRKNIMQEGQ-LEHSVSIASLSVRQLQDMITNSIRAQYG 64
           E       AESSQ  + KV DK KN++QE Q  + S S+ASLSV+QLQDMITNSIRAQYG
Sbjct: 121 EQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITNSIRAQYG 180

Query: 65  GPSQSSLTYSKPYTKRIKNLIMPVGYQPPKFQQFDGKGNPKQHIAHFVETYENAGTRGDL 124
           GPSQ+S  YSKPYTKRI NL MP+GYQPPKFQQFDGKGNPKQH+AHFVET ENAG+RGD 
Sbjct: 181 GPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQ 240

Query: 125 LVKQFVRTLKGNAFDWYTDLEPESINGWEQLEREFLNRFYSTRRIGGNIMRERWYCDEFF 184
           LV+QFVR+LKGNAF+WYTDLEPESI  WEQLE+EFLNRFYSTRR                
Sbjct: 241 LVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRR---------------- 300

Query: 185 LVKKGSMGERKAKERQKKCRFKVGMESVEEGKRERSVGVGVEERERNQGERCLGRVVS-R 244
                                 V M  +   K+ +             GE  +  +   R
Sbjct: 301 ---------------------TVSMMELTNTKQRK-------------GEPVIDYINRWR 360

Query: 245 ALSLDCKDRLMELSAIELCIQGMHWGLLYILQGIKPRTFEELATRAHDMKLSIGNRGDKD 304
           ALSLDCKDRL ELSA+E+C QGMHWGLLYILQGIKPRTFEELATRAHDM+LSI +RG KD
Sbjct: 361 ALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKD 381

Query: 305 LLVPNLKRMSK 314
            LVP +K+  K
Sbjct: 421 FLVPEVKKDKK 381

BLAST of Moc04g32140 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 345.1 bits (884), Expect = 6.4e-91
Identity = 190/318 (59.75%), Postives = 219/318 (68.87%), Query Frame = 0

Query: 2   NQIEIQDVANVAESSQNQIAKVSDKRKNIMQEGQLEHSVSIASLSVRQLQDMITNSIRAQ 61
           N IE +D    AESS     K ++K K IMQE Q ++S SIASLSV+QLQ+MI NSI+ Q
Sbjct: 122 NHIESRD---AAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQ 181

Query: 62  YGGPSQSSLTYSKPYTKRIKNLIMPVGYQPPKFQQFDGKGNPKQHIAHFVETYENAGTRG 121
           YGGP+Q+   YSKPYTKRI N+ MP GYQPPKFQQFDGKGNPKQH+AHF+ET E AGTRG
Sbjct: 182 YGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRG 241

Query: 122 DLLVKQFVRTLKGNAFDWYTDLEPESINGWEQLEREFLNRFYSTRRIGGNIMRERWYCDE 181
           DLLVKQFVRTLKGNAFDWYTDLEPESI+ WEQLER+FLNRFYSTRRI             
Sbjct: 242 DLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRI------------- 301

Query: 182 FFLVKKGSMGERKAKERQKKCRFKVGMESVEEGKRERSVGVGVEERERNQGERCLGRVVS 241
                  SM E  A +++K                               GE  +  +  
Sbjct: 302 ------VSMIELTATKQRK-------------------------------GEPVIDYINR 361

Query: 242 -RALSLDCKDRLMELSAIELCIQGMHWGLLYILQGIKPRTFEELATRAHDMKLSIGNRGD 301
            RALSLDCKDRL ELSA+E+C QGMHWGLLYILQGIKPRTFEELATRAHDM+LSI NRG+
Sbjct: 362 WRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGN 386

Query: 302 KDLLVPNLKRMSKNAETT 319
            DLLVP +++  K  ++T
Sbjct: 422 NDLLVPEVRKEKKEVKST 386

BLAST of Moc04g32140 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.1e-90
Identity = 187/311 (60.13%), Postives = 213/311 (68.49%), Query Frame = 0

Query: 5   EIQDVANVAESSQNQIAKVSDKRKNIMQEGQ-LEHSVSIASLSVRQLQDMITNSIRAQYG 64
           E       AESSQ  + KV DK KN++QE Q  + S S+ASLSV+QLQDMIT+SIRAQYG
Sbjct: 121 EQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITSSIRAQYG 180

Query: 65  GPSQSSLTYSKPYTKRIKNLIMPVGYQPPKFQQFDGKGNPKQHIAHFVETYENAGTRGDL 124
           GPSQ+S  YSKPYTKRI NL MP+GYQPPKFQQFDGKGNPKQH+AHFVET ENAG+RGD 
Sbjct: 181 GPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQ 240

Query: 125 LVKQFVRTLKGNAFDWYTDLEPESINGWEQLEREFLNRFYSTRRIGGNIMRERWYCDEFF 184
           LV+QFVR+LKGNAF+WYTDLEPESI  WEQLE+EFLNRFYSTRR                
Sbjct: 241 LVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRR---------------- 300

Query: 185 LVKKGSMGERKAKERQKKCRFKVGMESVEEGKRERSVGVGVEERERNQGERCLGRVVS-R 244
                                 V M  +   K+ +             GE  +  +   R
Sbjct: 301 ---------------------TVSMMELTNTKQRK-------------GEPVIDYINRWR 360

Query: 245 ALSLDCKDRLMELSAIELCIQGMHWGLLYILQGIKPRTFEELATRAHDMKLSIGNRGDKD 304
           ALSLDCKDRL ELSA+E+C QGMHWGLLYILQGIKPRTFEELATRAHDM+LSI +RG KD
Sbjct: 361 ALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKD 381

Query: 305 LLVPNLKRMSK 314
            LVP +K+  K
Sbjct: 421 FLVPEVKKDKK 381

BLAST of Moc04g32140 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.1e-90
Identity = 187/311 (60.13%), Postives = 213/311 (68.49%), Query Frame = 0

Query: 5   EIQDVANVAESSQNQIAKVSDKRKNIMQEGQ-LEHSVSIASLSVRQLQDMITNSIRAQYG 64
           E       AESSQ  + KV DK KN++QE Q  + S S+ASLSV+QLQDMIT+SIRAQYG
Sbjct: 121 EQMQTRETAESSQTPVVKVDDKGKNVVQENQPQQQSTSVASLSVQQLQDMITSSIRAQYG 180

Query: 65  GPSQSSLTYSKPYTKRIKNLIMPVGYQPPKFQQFDGKGNPKQHIAHFVETYENAGTRGDL 124
           GPSQ+S  YSKPYTKRI NL MP+GYQPPKFQQFDGKGNPKQH+AHFVET ENAG+RGD 
Sbjct: 181 GPSQTSFMYSKPYTKRIDNLRMPLGYQPPKFQQFDGKGNPKQHVAHFVETCENAGSRGDQ 240

Query: 125 LVKQFVRTLKGNAFDWYTDLEPESINGWEQLEREFLNRFYSTRRIGGNIMRERWYCDEFF 184
           LV+QFVR+LKGNAF+WYTDLEPESI  WEQLE+EFLNRFYSTRR                
Sbjct: 241 LVRQFVRSLKGNAFEWYTDLEPESIESWEQLEKEFLNRFYSTRR---------------- 300

Query: 185 LVKKGSMGERKAKERQKKCRFKVGMESVEEGKRERSVGVGVEERERNQGERCLGRVVS-R 244
                                 V M  +   K+ +             GE  +  +   R
Sbjct: 301 ---------------------TVSMMELTNTKQRK-------------GEPVIDYINRWR 360

Query: 245 ALSLDCKDRLMELSAIELCIQGMHWGLLYILQGIKPRTFEELATRAHDMKLSIGNRGDKD 304
           ALSLDCKDRL ELSA+E+C QGMHWGLLYILQGIKPRTFEELATRAHDM+LSI +RG KD
Sbjct: 361 ALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIASRGTKD 381

Query: 305 LLVPNLKRMSK 314
            LVP +K+  K
Sbjct: 421 FLVPEVKKDKK 381

BLAST of Moc04g32140 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 3.1e-91
Identity = 190/318 (59.75%), Postives = 219/318 (68.87%), Query Frame = 0

Query: 2   NQIEIQDVANVAESSQNQIAKVSDKRKNIMQEGQLEHSVSIASLSVRQLQDMITNSIRAQ 61
           N IE +D    AESS     K ++K K IMQE Q ++S SIASLSV+QLQ+MI NSI+ Q
Sbjct: 122 NHIESRD---AAESSHTHTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMIANSIKTQ 181

Query: 62  YGGPSQSSLTYSKPYTKRIKNLIMPVGYQPPKFQQFDGKGNPKQHIAHFVETYENAGTRG 121
           YGGP+Q+   YSKPYTKRI N+ MP GYQPPKFQQFDGKGNPKQH+AHF+ET E AGTRG
Sbjct: 182 YGGPAQTFSLYSKPYTKRIDNMRMPHGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRG 241

Query: 122 DLLVKQFVRTLKGNAFDWYTDLEPESINGWEQLEREFLNRFYSTRRIGGNIMRERWYCDE 181
           DLLVKQFVRTLKGNAFDWYTDLEPESI+ WEQLER+FLNRFYSTRRI             
Sbjct: 242 DLLVKQFVRTLKGNAFDWYTDLEPESIDSWEQLERDFLNRFYSTRRI------------- 301

Query: 182 FFLVKKGSMGERKAKERQKKCRFKVGMESVEEGKRERSVGVGVEERERNQGERCLGRVVS 241
                  SM E  A +++K                               GE  +  +  
Sbjct: 302 ------VSMIELTATKQRK-------------------------------GEPVIDYINR 361

Query: 242 -RALSLDCKDRLMELSAIELCIQGMHWGLLYILQGIKPRTFEELATRAHDMKLSIGNRGD 301
            RALSLDCKDRL ELSA+E+C QGMHWGLLYILQGIKPRTFEELATRAHDM+LSI NRG+
Sbjct: 362 WRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGN 386

Query: 302 KDLLVPNLKRMSKNAETT 319
            DLLVP +++  K  ++T
Sbjct: 422 NDLLVPEVRKEKKEVKST 386

BLAST of Moc04g32140 vs. ExPASy TrEMBL
Match: A0A5A7UXF0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006290 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 2.2e-89
Identity = 190/314 (60.51%), Postives = 212/314 (67.52%), Query Frame = 0

Query: 2   NQIEIQDVANVAESSQNQIAKVSDKRKNIMQEGQLEHSVSIASLSVRQLQDMITNSIRAQ 61
           N IE +D    AESS   I K +DK K +MQE Q ++S SIASLSV+QLQ+MI +SI+ Q
Sbjct: 90  NHIESRD---AAESSHKHIVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQ 149

Query: 62  YGGPSQSSLTYSKPYTKRIKNLIMPVGYQPPKFQQFDGKGNPKQHIAHFVETYENAGTRG 121
           YGGP+Q+   YSKPYTKRI NL MP GYQPPKFQQFDGKGNPKQH+AHF+ET E AGTRG
Sbjct: 150 YGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRG 209

Query: 122 DLLVKQFVRTLKGNAFDWYTDLEPESINGWEQLEREFLNRFYSTRRIGGNIMRERWYCDE 181
           DLLVKQFVRTLKGNAFDWY DLEPESI+ WEQLER+FLNRFYSTRRI             
Sbjct: 210 DLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRI------------- 269

Query: 182 FFLVKKGSMGERKAKERQKKCRFKVGMESVEEGKRERSVGVGVEERERNQGERCLGRVVS 241
                  SM E     +QK                               GE  +  +  
Sbjct: 270 ------VSMMELTNTRQQK-------------------------------GELVINYINR 329

Query: 242 -RALSLDCKDRLMELSAIELCIQGMHWGLLYILQGIKPRTFEELATRAHDMKLSIGNRGD 301
            RALSLDCKDRL ELSA+E+C QGMHWGLLYILQGIKPRTFEELATRAHDM+LSI NRG 
Sbjct: 330 WRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGA 349

Query: 302 KDLLVPNLKRMSKN 315
           KD L+P   R  KN
Sbjct: 390 KDFLIPK-SRSDKN 349

BLAST of Moc04g32140 vs. ExPASy TrEMBL
Match: A0A5A7UUI7 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00790 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.1e-88
Identity = 189/314 (60.19%), Postives = 211/314 (67.20%), Query Frame = 0

Query: 2   NQIEIQDVANVAESSQNQIAKVSDKRKNIMQEGQLEHSVSIASLSVRQLQDMITNSIRAQ 61
           N IE +D    AESS     K +DK K +MQE Q ++S SIASLSV+QLQ+MI +SI+ Q
Sbjct: 122 NHIESRD---AAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQ 181

Query: 62  YGGPSQSSLTYSKPYTKRIKNLIMPVGYQPPKFQQFDGKGNPKQHIAHFVETYENAGTRG 121
           YGGP+Q+   YSKPYTKRI NL MP GYQPPKFQQFDGKGNPKQH+AHF+ET E AGTRG
Sbjct: 182 YGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRG 241

Query: 122 DLLVKQFVRTLKGNAFDWYTDLEPESINGWEQLEREFLNRFYSTRRIGGNIMRERWYCDE 181
           DLLVKQFVRTLKGNAFDWY DLEPESI+ WEQLER+FLNRFYSTRRI             
Sbjct: 242 DLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRI------------- 301

Query: 182 FFLVKKGSMGERKAKERQKKCRFKVGMESVEEGKRERSVGVGVEERERNQGERCLGRVVS 241
                  SM E     +QK                               GE  +  +  
Sbjct: 302 ------VSMMELTNTRQQK-------------------------------GELVIDYINR 361

Query: 242 -RALSLDCKDRLMELSAIELCIQGMHWGLLYILQGIKPRTFEELATRAHDMKLSIGNRGD 301
            RALSLDCKDRL ELSA+E+C QGMHWGLLYILQGIKPRTFEELATRAHDM+LSI NRG 
Sbjct: 362 WRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGA 381

Query: 302 KDLLVPNLKRMSKN 315
           KD L+P   R  KN
Sbjct: 422 KDFLIPK-SRSDKN 381

BLAST of Moc04g32140 vs. ExPASy TrEMBL
Match: A0A5D3D4X3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001130 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.1e-88
Identity = 189/314 (60.19%), Postives = 211/314 (67.20%), Query Frame = 0

Query: 2   NQIEIQDVANVAESSQNQIAKVSDKRKNIMQEGQLEHSVSIASLSVRQLQDMITNSIRAQ 61
           N IE +D    AESS     K +DK K +MQE Q ++S SIASLSV+QLQ+MI +SI+ Q
Sbjct: 90  NHIESRD---AAESSHKHTVKNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIASSIKTQ 149

Query: 62  YGGPSQSSLTYSKPYTKRIKNLIMPVGYQPPKFQQFDGKGNPKQHIAHFVETYENAGTRG 121
           YGGP+Q+   YSKPYTKRI NL MP GYQPPKFQQFDGKGNPKQH+AHF+ET E AGTRG
Sbjct: 150 YGGPAQTFSLYSKPYTKRIDNLRMPNGYQPPKFQQFDGKGNPKQHVAHFIETCETAGTRG 209

Query: 122 DLLVKQFVRTLKGNAFDWYTDLEPESINGWEQLEREFLNRFYSTRRIGGNIMRERWYCDE 181
           DLLVKQFVRTLKGNAFDWY DLEPESI+ WEQLER+FLNRFYSTRRI             
Sbjct: 210 DLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNRFYSTRRI------------- 269

Query: 182 FFLVKKGSMGERKAKERQKKCRFKVGMESVEEGKRERSVGVGVEERERNQGERCLGRVVS 241
                  SM E     +QK                               GE  +  +  
Sbjct: 270 ------VSMMELTNTRQQK-------------------------------GELVIDYINR 329

Query: 242 -RALSLDCKDRLMELSAIELCIQGMHWGLLYILQGIKPRTFEELATRAHDMKLSIGNRGD 301
            RALSLDCKDRL ELSA+E+C QGMHWGLLYILQGIKPRTFEELATRAHDM+LSI NRG 
Sbjct: 330 WRALSLDCKDRLTELSAVEMCTQGMHWGLLYILQGIKPRTFEELATRAHDMELSIANRGA 349

Query: 302 KDLLVPNLKRMSKN 315
           KD L+P   R  KN
Sbjct: 390 KDFLIPK-SRSDKN 349

BLAST of Moc04g32140 vs. ExPASy TrEMBL
Match: A0A5A7UR51 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00520 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.9e-88
Identity = 178/289 (61.59%), Postives = 204/289 (70.59%), Query Frame = 0

Query: 31  MQEGQLEHSVSIASLSVRQLQDMITNSIRAQYGGPSQSSLTYSKPYTKRIKNLIMPVGYQ 90
           MQE Q ++S SIASLSV++LQ+MI NSI+ QYGGP+Q+   YSKPYTKRI N+ MP GYQ
Sbjct: 1   MQESQPQNSTSIASLSVQRLQEMIANSIKTQYGGPAQTFSLYSKPYTKRIDNMRMPHGYQ 60

Query: 91  PPKFQQFDGKGNPKQHIAHFVETYENAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESING 150
           PPKFQQFDGKGNPKQH+AHF+ETYE AGTRGDLLVKQFVRTLKGNAFDWYTDLEPESI+ 
Sbjct: 61  PPKFQQFDGKGNPKQHVAHFIETYETAGTRGDLLVKQFVRTLKGNAFDWYTDLEPESIDS 120

Query: 151 WEQLEREFLNRFYSTRRIGGNIMRERWYCDEFFLVKKGSMGERKAKERQKKCRFKVGMES 210
           WEQLER+FLNRFYSTRRI                    SM E  A +++K          
Sbjct: 121 WEQLERDFLNRFYSTRRI-------------------VSMIELTATKQRK---------- 180

Query: 211 VEEGKRERSVGVGVEERERNQGERCLGRVVS-RALSLDCKDRLMELSAIELCIQGMHWGL 270
                                GE  +  +   RALSLDCKDRL ELS +E+C QGMHWGL
Sbjct: 181 ---------------------GEPVIDYINRWRALSLDCKDRLTELSDVEMCTQGMHWGL 239

Query: 271 LYILQGIKPRTFEELATRAHDMKLSIGNRGDKDLLVPNLKRMSKNAETT 319
           LYILQGIKPRTFEELATRAHDMKLSI NRG+ DLLVP +++  K  ++T
Sbjct: 241 LYILQGIKPRTFEELATRAHDMKLSIANRGNNDLLVPEVRKEKKEVKST 239

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_031742199.12.9e-9160.45uncharacterized protein LOC105435721 [Cucumis sativus][more]
XP_031735972.12.9e-9160.45uncharacterized protein LOC116401693 [Cucumis sativus][more]
KAA0047477.16.4e-9159.75uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa][more]
XP_031739134.11.1e-9060.13uncharacterized protein LOC116402863 [Cucumis sativus][more]
XP_031742032.11.1e-9060.13uncharacterized protein LOC116404025 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TZU93.1e-9159.75Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... [more]
A0A5A7UXF02.2e-8960.51Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7UUI71.1e-8860.19Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3D4X31.1e-8860.19Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7UR511.9e-8861.59Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g32140.1Moc04g32140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process