Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTGCAACAGTCGATTGGTAATATGGAAACAAGCCAAACGAACATATCTGCACCATCGAGTTCCTCTATAGCAACAGAAGCAGCCGTCAATCCACTATATGAGTCTTGGGTAACTACCGACCAGCTACTTCTTGGTTGGTTGTACAACTCTATGACTCCAGAAGTTGCAACACAAGTGATGGGGTACGAAAATGCTTGTGATTTATGGGCTGCCATACAAGAACTCTTTGGAGTACAGTCTCAGGCGGAAGAAGATTATCTCCGTCAGGTATTTGAACAAACTCGAAAAGGTTCTCTTAAAATGACTGATTTTTTGCGTGTTATGAAGTCTCATGCAGACAATTTGGGTCAAGCTGGAAGCCCCGTACCCACTCGATCTTTGATTTCTCAAGTTTTGCTGGGATTAGATGAAGAGTATAATCCTGTGGTAGCAACGATCCAAGGAAAACGAGGCATTTCGTGGCCTGAAATGCAAGCCGAATTGTTGGTATTTGAGAAGAGGTTAGAACTTCAGAATTCTCATAAAAATACAGTATCTTTTAACAACTCTGTTTCTGTGAATATGGCTAATAGTAGCAGAAGTGTAAGTGGTGGAAACCAACGTCAAAATCAAAACTCTCGGCCACCATTCAACAACAATCGGTGGTCGAAATCGAGGTAGAGGACGGTGGAACAACAACAATAGTCGGCAAATTTGTCAGGTGTGTGGAAAACTTGGACATTCAGCACTAACGTGCTACCATCGATTTGATAAGGAGTACAAGAACAATACACAAAGCCAGGGTAAAAACTTCAATCGCGACTCTAACCAGGGGGTTAACAACAACTCTGGACAAGGTACATCTTATGCCTTCACAGCAACCCAAAATAACAATCCTTTTTTGGCCAATCCAGAAAAAGTGATAGACCCGAATTGGTATGTGGATAGTGGTGCTTCAAATCATGTCACCGCCGACTACAATAGTATGGTTCAACCTACTGAGTATGGAGGTATGGAAAGAGTTACAGTAGGTAATGGCGATAAATTAAAAATATCTCATGTTGGCAAATCCTGTTTAGTTTCTGACGGTGGGTTGGTCATGCTTGAAAATGTGTTGTGCGTATCTAACATAGCTAAAAATCTAGTTAGCGTGTCTAAACTCGCTAAAGACAATAACGTATACCTTGAATTTCATGCTGATTCTTGTCTTGTAAAGGATATACGTTCGGGCAAGGTGGTGCTGAAAGGGGCTCTTAA
mRNA sequence
ATGTTTGTGCAACAGTCGATTGGTAATATGGAAACAAGCCAAACGAACATATCTGCACCATCGAGTTCCTCTATAGCAACAGAAGCAGCCGTCAATCCACTATATGAGTCTTGGGTAACTACCGACCAGCTACTTCTTGGTTGGTTGTACAACTCTATGACTCCAGAAGTTGCAACACAAGTGATGGGGTACGAAAATGCTTGTGATTTATGGGCTGCCATACAAGAACTCTTTGGAGTACAGTCTCAGGCGGAAGAAGATTATCTCCGTCAGGTATTTGAACAAACTCGAAAAGGTTCTCTTAAAATGACTGATTTTTTGCGTGTTATGAAGTCTCATGCAGACAATTTGGGTCAAGCTGGAAGCCCCGTACCCACTCGATCTTTGATTTCTCAAGTTTTGCTGGGATTAGATGAAGAGTATAATCCTGTGGTAGCAACGATCCAAGGAAAACGAGGCATTTCGTGGCCTGAAATGCAAGCCGAATTGTTGGTATTTGAGAAGAGGTTAGAACTTCAGAATTCTCATAAAAATACAGTATCTTTTAACAACTCTGTTTCTGTGAATATGGCTAATAGTAGCAGAAGTGGTAAAAACTTCAATCGCGACTCTAACCAGGGGGTTAACAACAACTCTGGACAAGGTACATCTTATGCCTTCACAGCAACCCAAAATAACAATCCTTTTTTGGCCAATCCAGAAAAAGTGATAGACCCGAATTGGTATGTGGATAGTGGTGCTTCAAATCATGTCACCGCCGACTACAATAGTATGGTTCAACCTACTGAGTATGGAGGTATGGAAAGAGTTACAGTAGGATATACGTTCGGGCAAGGTGGTGCTGAAAGGGGCTCTTAA
Coding sequence (CDS)
ATGTTTGTGCAACAGTCGATTGGTAATATGGAAACAAGCCAAACGAACATATCTGCACCATCGAGTTCCTCTATAGCAACAGAAGCAGCCGTCAATCCACTATATGAGTCTTGGGTAACTACCGACCAGCTACTTCTTGGTTGGTTGTACAACTCTATGACTCCAGAAGTTGCAACACAAGTGATGGGGTACGAAAATGCTTGTGATTTATGGGCTGCCATACAAGAACTCTTTGGAGTACAGTCTCAGGCGGAAGAAGATTATCTCCGTCAGGTATTTGAACAAACTCGAAAAGGTTCTCTTAAAATGACTGATTTTTTGCGTGTTATGAAGTCTCATGCAGACAATTTGGGTCAAGCTGGAAGCCCCGTACCCACTCGATCTTTGATTTCTCAAGTTTTGCTGGGATTAGATGAAGAGTATAATCCTGTGGTAGCAACGATCCAAGGAAAACGAGGCATTTCGTGGCCTGAAATGCAAGCCGAATTGTTGGTATTTGAGAAGAGGTTAGAACTTCAGAATTCTCATAAAAATACAGTATCTTTTAACAACTCTGTTTCTGTGAATATGGCTAATAGTAGCAGAAGTGGTAAAAACTTCAATCGCGACTCTAACCAGGGGGTTAACAACAACTCTGGACAAGGTACATCTTATGCCTTCACAGCAACCCAAAATAACAATCCTTTTTTGGCCAATCCAGAAAAAGTGATAGACCCGAATTGGTATGTGGATAGTGGTGCTTCAAATCATGTCACCGCCGACTACAATAGTATGGTTCAACCTACTGAGTATGGAGGTATGGAAAGAGTTACAGTAGGATATACGTTCGGGCAAGGTGGTGCTGAAAGGGGCTCTTAA
Protein sequence
MFVQQSIGNMETSQTNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAIQELFGVQSQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKRLELQNSHKNTVSFNNSVSVNMANSSRSGKNFNRDSNQGVNNNSGQGTSYAFTATQNNNPFLANPEKVIDPNWYVDSGASNHVTADYNSMVQPTEYGGMERVTVGYTFGQGGAERGS
Homology
BLAST of Moc04g31620 vs. NCBI nr
Match:
XP_022148963.1 (uncharacterized protein LOC111017501 [Momordica charantia])
HSP 1 Score: 319.7 bits (818), Expect = 2.6e-83
Identity = 165/185 (89.19%), Postives = 170/185 (91.89%), Query Frame = 0
Query: 1 MFVQQSIGNMETSQTNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQ 60
MFVQQSIGNMETSQTNISAPSSSSIATEAA+NPLYESWVTTDQLLLGWLYNSMTPEVATQ
Sbjct: 1 MFVQQSIGNMETSQTNISAPSSSSIATEAAINPLYESWVTTDQLLLGWLYNSMTPEVATQ 60
Query: 61 VMGYENACDLWAAIQELFGVQSQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADNLGQA 120
VMGYENACDLWAAIQELFGVQSQAEEDYLRQVF+QTRKGSLKMTDFLRVMKSHADNLGQA
Sbjct: 61 VMGYENACDLWAAIQELFGVQSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKSHADNLGQA 120
Query: 121 GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKRLELQNSHKNTV 180
GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAE + QN +
Sbjct: 121 GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAEFRSVSGGNQRQNQNSQP- 180
Query: 181 SFNNS 186
FNN+
Sbjct: 181 PFNNN 184
BLAST of Moc04g31620 vs. NCBI nr
Match:
XP_038905164.1 (uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida])
HSP 1 Score: 243.4 bits (620), Expect = 2.3e-60
Identity = 155/348 (44.54%), Postives = 191/348 (54.89%), Query Frame = 0
Query: 1 MFVQQSIGN-----------METSQTNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWL 60
MF+Q +IG S S +SS T VNP YESW+ DQLLLGWL
Sbjct: 1 MFLQSAIGESIPIGSTGAGAAPRSIKGSSGSGASSSLTALEVNPQYESWMAVDQLLLGWL 60
Query: 61 YNSMTPEVATQVMGYENACDLWAAIQELFGVQSQAEEDYLRQVFEQTRKGSLKMTDFLRV 120
YNSMTPEVA QVMG E A DLW +I +LFGVQS+ EEDYLR VF+ TRKG+LKM ++L+
Sbjct: 61 YNSMTPEVAIQVMGCECAKDLWTSIPQLFGVQSRVEEDYLRHVFQTTRKGNLKMEEYLQT 120
Query: 121 MKSHADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKR 180
MK + DNL QAGSP+P R+L+SQVLLGLDEEYN +VA IQG+ +SW +MQ+ELL++E+R
Sbjct: 121 MKMNTDNLEQAGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLYERR 180
Query: 181 LELQNSHKNTVSFN--NSVSVNMANS-------------------SRSGKNFNRDSNQGV 240
LE Q++ K TV FN ++ SVNM N+ R G R +G
Sbjct: 181 LEHQSNQKTTVGFNQISNASVNMTNTRHVNQNNKTNSSNQSIGGGQRGGGGHGRGRGRGR 240
Query: 241 NN----------------------------NSGQGTSYAFTATQ---------------N 274
NN NS Q F Q
Sbjct: 241 NNKKPVCQVCGKVGHIAFYCFNRYSRDFVPNSPQNKVEPFPNNQTKNTQPHPTALAIAYG 300
BLAST of Moc04g31620 vs. NCBI nr
Match:
XP_038905161.1 (uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida])
HSP 1 Score: 241.9 bits (616), Expect = 6.8e-60
Identity = 153/341 (44.87%), Postives = 189/341 (55.43%), Query Frame = 0
Query: 1 MFVQQSIGN-----------METSQTNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWL 60
MF+Q +IG S S +SS T VNP YESW+ DQLLLGWL
Sbjct: 1 MFLQSAIGESIPIGSTGAGAAPRSIKGSSGSGASSSLTALEVNPQYESWMAVDQLLLGWL 60
Query: 61 YNSMTPEVATQVMGYENACDLWAAIQELFGVQSQAEEDYLRQVFEQTRKGSLKMTDFLRV 120
YNSMTPEVA QVMG E A DLW +I +LFGVQS+ EEDYLR VF+ TRKG+LKM ++L+
Sbjct: 61 YNSMTPEVAIQVMGCECAKDLWTSIPQLFGVQSRVEEDYLRHVFQTTRKGNLKMEEYLQT 120
Query: 121 MKSHADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKR 180
MK + DNL QAGSP+P R+L+SQVLLGLDEEYN +VA IQG+ +SW +MQ+ELL++E+R
Sbjct: 121 MKMNTDNLEQAGSPMPPRTLVSQVLLGLDEEYNAIVAMIQGRVDMSWLDMQSELLLYERR 180
Query: 181 LELQNSHKNTVSFN--NSVSVNMANS-------------------SRSGKNFNRDSNQGV 240
LE Q++ K TV FN ++ SVNM N+ R G R +G
Sbjct: 181 LEHQSNQKTTVGFNQISNASVNMTNTRHVNQNNKTNSSNQSIGGGQRGGGGHGRGRGRGR 240
Query: 241 NN----------------------------NSGQGTSYAFTATQ---------------N 267
NN NS Q F Q
Sbjct: 241 NNKKPVCQVCGKVGHIAFYCFNRYSRDFVPNSPQNKVEPFPNNQTKNTQPHPTALAIAYG 300
BLAST of Moc04g31620 vs. NCBI nr
Match:
XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])
HSP 1 Score: 240.7 bits (613), Expect = 1.5e-59
Identity = 140/294 (47.62%), Postives = 185/294 (62.93%), Query Frame = 0
Query: 15 TNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAI 74
TNI +SS + +NP YE+W+ D+LLLGWLYNSM +VA QVMG+ + +LW A+
Sbjct: 82 TNIEGSTSSQ--SSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAV 141
Query: 75 QELFGVQSQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVL 134
QELFGVQS+AE DYL+QVF+QT KGSL+M ++L++MKSHADNL AGS V R L+SQVL
Sbjct: 142 QELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVL 201
Query: 135 LGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKRLELQNSHKNTVSFN--NSVSVNMAN 194
GLDEEYNP+V +QGK +SW EM AELL +EKRLE QNS K+ + N + SVN +
Sbjct: 202 TGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEYQNSLKSGIPINQTQTPSVNYVD 261
Query: 195 SSRSGKNF--NRDSNQGVN---NNSGQGTSYA--------------------FT------ 254
G++F N+ +N G N +N+ +G Y FT
Sbjct: 262 ----GRSFQTNQRTNNGNNSHGSNTHRGGGYQRGSFGQRNRGRGPQPTQHKNFTPSNSGP 321
Query: 255 ---ATQNNNPFLANPEKVIDPNWYVDSGASNHVTADYNSMVQPTEYGGMERVTV 273
A + + + PE VIDP+WY DSGA++HVTA+ N++ Q +Y G E V V
Sbjct: 322 NVFAAHHTSTTVTTPETVIDPSWYADSGATSHVTANPNNVEQKVDYSGTENVIV 369
BLAST of Moc04g31620 vs. NCBI nr
Match:
KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa])
HSP 1 Score: 239.2 bits (609), Expect = 4.4e-59
Identity = 142/301 (47.18%), Postives = 179/301 (59.47%), Query Frame = 0
Query: 22 SSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAIQELFGVQ 81
+SS T VN L+E WVTTD LLLGWLYNSMTP+VA Q+MG+ N DLW A Q+ FGVQ
Sbjct: 92 ASSSITPRIVNSLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQ 151
Query: 82 SQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEEY 141
S+AEED+LRQ+ + TRKG+ KM ++L VMK++ DNLGQ GSPVP R+LISQVLLGLDE Y
Sbjct: 152 SRAEEDFLRQMLQTTRKGNTKMEEYLLVMKTNVDNLGQVGSPVPRRALISQVLLGLDEVY 211
Query: 142 NPVVATIQGKRGISWPEMQAELLVFEKRLELQNSHKNTVSFNN---SVSVNMA-----NS 201
N V+ IQGK ISW +MQ++LL+FEK L+ QN+ K N S ++NMA N
Sbjct: 212 NLVIVVIQGKPDISWLDMQSKLLIFEKILKHQNTQKKKKKKGNITQSPALNMAQRFALNG 271
Query: 202 SRSGKN----------------------------------------FNR--------DSN 261
R+ N FN+ D N
Sbjct: 272 QRNHSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQDRN 331
Query: 262 QGVNNNSGQGTSYAFTATQNNNPFLANPEKVIDPNWYVDSGASNHVTADYNSMVQPTEYG 267
+ +N S F +TQN PF A P+ V+DPNWY+DSGA+NHVT + ++M PTEY
Sbjct: 332 EHSSNGSVSPNPAVFVSTQNATPF-ATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYS 391
BLAST of Moc04g31620 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 3.8e-13
Identity = 76/303 (25.08%), Postives = 130/303 (42.90%), Query Frame = 0
Query: 23 SSIATEAA--VNPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAIQELFGV 82
++I T+AA VNP Y W D+L+ + +++ V V A +W +++++
Sbjct: 60 ATIGTDAAPRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYAN 119
Query: 83 QSQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEE 142
S LR +Q KG+ + D+++ + + D L G P+ + +VL L EE
Sbjct: 120 PSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEE 179
Query: 143 YNPVVATIQGK-RGISWPEMQAELLVFEKRLELQN------------SHKNTVSFNNSVS 202
Y PV+ I K + E+ LL E ++ + SH+NT + NN+ +
Sbjct: 180 YKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNNNNN 239
Query: 203 VNMANS-------------SRSGKNFNRDSNQ-----------GVNNNSGQGTSY----- 262
N N +S NF+ ++NQ GV +S + S
Sbjct: 240 GNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFL 299
Query: 263 -AFTATQNNNPF--------LANPEKVIDPNWYVDSGASNHVTADYNSMVQPTEYGGMER 273
+ + Q +PF LA NW +DSGA++H+T+D+N++ Y G +
Sbjct: 300 SSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDD 359
BLAST of Moc04g31620 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05
Identity = 67/310 (21.61%), Postives = 115/310 (37.10%), Query Frame = 0
Query: 23 SSIATEAA--VNPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAIQELFGV 82
++I T+A VNP Y W D+L+ + +++ V V A +W +++++
Sbjct: 60 ATIGTDAVPRVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYAN 119
Query: 83 QSQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEE 142
S LR + + D L G P+ + +VL L ++
Sbjct: 120 PSYGHVTQLRFI-------------------TRFDQLALLGKPMDHDEQVERVLENLPDD 179
Query: 143 YNPVVATIQGK-RGISWPEMQAELLVFEKRLELQNSHKNTVSFNNSVSVNMANSSRSGKN 202
Y PV+ I K S E+ L+ E +L NS + N V+ N++R+
Sbjct: 180 YKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVTHRNTNTNRNQN- 239
Query: 203 FNRDSNQGVNNNSGQGTS--------------------------------------YAFT 262
NR N+ NNN+ + S + F
Sbjct: 240 -NRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQ 299
Query: 263 ATQN-------------------NNPFLANPEKVIDPNWYVDSGASNHVTADYNSMVQPT 273
+T N N+P+ AN NW +DSGA++H+T+D+N++
Sbjct: 300 STTNQQQSTSPFTPWQPRANLAVNSPYNAN-------NWLLDSGATHHITSDFNNLSFHQ 341
BLAST of Moc04g31620 vs. ExPASy TrEMBL
Match:
A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1)
HSP 1 Score: 319.7 bits (818), Expect = 1.2e-83
Identity = 165/185 (89.19%), Postives = 170/185 (91.89%), Query Frame = 0
Query: 1 MFVQQSIGNMETSQTNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQ 60
MFVQQSIGNMETSQTNISAPSSSSIATEAA+NPLYESWVTTDQLLLGWLYNSMTPEVATQ
Sbjct: 1 MFVQQSIGNMETSQTNISAPSSSSIATEAAINPLYESWVTTDQLLLGWLYNSMTPEVATQ 60
Query: 61 VMGYENACDLWAAIQELFGVQSQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADNLGQA 120
VMGYENACDLWAAIQELFGVQSQAEEDYLRQVF+QTRKGSLKMTDFLRVMKSHADNLGQA
Sbjct: 61 VMGYENACDLWAAIQELFGVQSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKSHADNLGQA 120
Query: 121 GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKRLELQNSHKNTV 180
GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAE + QN +
Sbjct: 121 GSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAEFRSVSGGNQRQNQNSQP- 180
Query: 181 SFNNS 186
FNN+
Sbjct: 181 PFNNN 184
BLAST of Moc04g31620 vs. ExPASy TrEMBL
Match:
A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)
HSP 1 Score: 240.7 bits (613), Expect = 7.3e-60
Identity = 140/294 (47.62%), Postives = 185/294 (62.93%), Query Frame = 0
Query: 15 TNISAPSSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAI 74
TNI +SS + +NP YE+W+ D+LLLGWLYNSM +VA QVMG+ + +LW A+
Sbjct: 82 TNIEGSTSSQ--SSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQVMGFSTSRELWTAV 141
Query: 75 QELFGVQSQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVL 134
QELFGVQS+AE DYL+QVF+QT KGSL+M ++L++MKSHADNL AGS V R L+SQVL
Sbjct: 142 QELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKSHADNLALAGSSVSVRDLVSQVL 201
Query: 135 LGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKRLELQNSHKNTVSFN--NSVSVNMAN 194
GLDEEYNP+V +QGK +SW EM AELL +EKRLE QNS K+ + N + SVN +
Sbjct: 202 TGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEYQNSLKSGIPINQTQTPSVNYVD 261
Query: 195 SSRSGKNF--NRDSNQGVN---NNSGQGTSYA--------------------FT------ 254
G++F N+ +N G N +N+ +G Y FT
Sbjct: 262 ----GRSFQTNQRTNNGNNSHGSNTHRGGGYQRGSFGQRNRGRGPQPTQHKNFTPSNSGP 321
Query: 255 ---ATQNNNPFLANPEKVIDPNWYVDSGASNHVTADYNSMVQPTEYGGMERVTV 273
A + + + PE VIDP+WY DSGA++HVTA+ N++ Q +Y G E V V
Sbjct: 322 NVFAAHHTSTTVTTPETVIDPSWYADSGATSHVTANPNNVEQKVDYSGTENVIV 369
BLAST of Moc04g31620 vs. ExPASy TrEMBL
Match:
A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 2.1e-59
Identity = 142/301 (47.18%), Postives = 179/301 (59.47%), Query Frame = 0
Query: 22 SSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAIQELFGVQ 81
+SS T VN L+E WVTTD LLLGWLYNSMTP+VA Q+MG+ N DLW A Q+ FGVQ
Sbjct: 92 ASSSITPRIVNSLFEQWVTTDLLLLGWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQ 151
Query: 82 SQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEEY 141
S+AEED+LRQ+ + TRKG+ KM ++L VMK++ DNLGQ GSPVP R+LISQVLLGLDE Y
Sbjct: 152 SRAEEDFLRQMLQTTRKGNTKMEEYLLVMKTNVDNLGQVGSPVPRRALISQVLLGLDEVY 211
Query: 142 NPVVATIQGKRGISWPEMQAELLVFEKRLELQNSHKNTVSFNN---SVSVNMA-----NS 201
N V+ IQGK ISW +MQ++LL+FEK L+ QN+ K N S ++NMA N
Sbjct: 212 NLVIVVIQGKPDISWLDMQSKLLIFEKILKHQNTQKKKKKKGNITQSPALNMAQRFALNG 271
Query: 202 SRSGKN----------------------------------------FNR--------DSN 261
R+ N FN+ D N
Sbjct: 272 QRNHSNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKEFSSPLVQDRN 331
Query: 262 QGVNNNSGQGTSYAFTATQNNNPFLANPEKVIDPNWYVDSGASNHVTADYNSMVQPTEYG 267
+ +N S F +TQN PF A P+ V+DPNWY+DSGA+NHVT + ++M PTEY
Sbjct: 332 EHSSNGSVSPNPAVFVSTQNATPF-ATPDTVVDPNWYIDSGATNHVTRECSNMTNPTEYS 391
BLAST of Moc04g31620 vs. ExPASy TrEMBL
Match:
A0A5D3E3L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001590 PE=4 SV=1)
HSP 1 Score: 232.3 bits (591), Expect = 2.6e-57
Identity = 133/253 (52.57%), Postives = 169/253 (66.80%), Query Frame = 0
Query: 21 SSSSIATEAAVNPLYESWVTTDQLLLGWLYNSMTPEVATQVMGYENACDLWAAIQELFGV 80
SSS+ VNP YE WVT+D LLLG +YNSM P+VA Q+MG+ A DLW AIQ LFG+
Sbjct: 55 SSSTSMNSKIVNPKYEQWVTSDMLLLGLIYNSMVPDVALQLMGFNTAKDLWEAIQNLFGI 114
Query: 81 QSQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEE 140
+S+AEE +LR F+ TR+G+ KM D+LR+MK +ADNLGQAGSPVP R LISQVLLGLDE
Sbjct: 115 KSRAEEYFLRHTFQTTREGNYKMEDYLRIMKINADNLGQAGSPVPHRYLISQVLLGLDEV 174
Query: 141 YNPVVATIQGKRGISWPEMQAELLVFEKRLELQNSHKNTVSFNNSVSVNMANSSRSGKNF 200
YNPV A IQGK ISW +MQ+ELL+FE +E+ + S ++ MA +N
Sbjct: 175 YNPVTAVIQGKPDISWLDMQSELLIFENLVEI------VLIKMESETILMAADVVEEENR 234
Query: 201 NRDSNQGVNNNSGQGTSYAFTATQNNNPFLANPEKVIDPNWYVDSGASNHVTADYNSMVQ 260
+ NQ N Q AF TQ ++ LA PE V+D N YVDSGA+NHVT+D++++
Sbjct: 235 GFNPNQ----NGKQIPDDAFITTQKSSS-LATPETVVDTNRYVDSGATNHVTSDHSNLWN 294
Query: 261 PTEYGGMERVTVG 274
+Y G E V VG
Sbjct: 295 IDDYSGNENVVVG 296
BLAST of Moc04g31620 vs. ExPASy TrEMBL
Match:
A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 2.3e-45
Identity = 118/280 (42.14%), Postives = 159/280 (56.79%), Query Frame = 0
Query: 57 VATQVMGYENACDLWAAIQELFGVQSQAEEDYLRQVFEQTRKGSLKMTDFLRVMKSHADN 116
+A Q+MG+ NA DLW A Q+LFGVQS+AEED+LRQ+F+ TRK D+LR+MK+++D
Sbjct: 45 IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104
Query: 117 LGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAELLVFEKRLELQNSH 176
LGQAGSPVP R+ ISQ LLGLDE YNPV+A IQGK ISW +MQ+ELL FEKRLE Q++
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164
Query: 177 KNTVSFNNSVSVNMANSSRSGKNFNRDSN---QGVNNNSGQGTSYAFTATQN-------- 236
KNT + +V VN+A +R+ +F + SN G N N+ QG F +
Sbjct: 165 KNTENIIQNV-VNIA-QNRNSSDFRKYSNHQFHGNNRNNSQGQRGGFNIGRGRGKGRGNK 224
Query: 237 --------------------NNPFL--------------------------------ANP 274
N FL A
Sbjct: 225 PTCQVCEKYGHSALVCYNRFNKEFLSPLVQDRGAQSSNFSKHSNLTVLVTGQSVNQFATA 284
BLAST of Moc04g31620 vs. TAIR 10
Match:
AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 43.9 bits (102), Expect = 2.5e-04
Identity = 56/234 (23.93%), Postives = 97/234 (41.45%), Query Frame = 0
Query: 37 SWVTTDQLLLGWLYNSMTP-EVATQVMGYENACDLWAAIQELFGVQSQAEEDYLRQVFEQ 96
+W D ++ LY ++TP + + + D+W I+ F A L
Sbjct: 64 NWQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRT 123
Query: 97 TRKGSLKMTDFLRVMKSHADNLGQAGSPVPTRSLISQVLLGLDEEYNPVVATIQGKRGI- 156
G +++ D+ R MK AD+L PV R+L+ VL GL+ +++ ++ I+ ++
Sbjct: 124 KDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFP 183
Query: 157 SWPEMQAELLVFEKRLELQNSHKNTVSFNNSVSVNMA--------NSSRSGKNFNRDSNQ 216
S+ + L E RL+ T ++S S +A N RSG N +
Sbjct: 184 SFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGGNQMGYRGR 243
Query: 217 GVNNNSGQGTSYAFT-------ATQNNNPFLANPEKVIDPNW----YVDSGASN 250
G NN +G F+ + N PF N ++ + W YV++ N
Sbjct: 244 GRGNNIFRGRGGRFSYYNMPTFNSWNRPPFYQNSYQMWNHPWGYPPYVNTNGGN 297
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022148963.1 | 2.6e-83 | 89.19 | uncharacterized protein LOC111017501 [Momordica charantia] | [more] |
XP_038905164.1 | 2.3e-60 | 44.54 | uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida] | [more] |
XP_038905161.1 | 6.8e-60 | 44.87 | uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida] | [more] |
XP_022151683.1 | 1.5e-59 | 47.62 | uncharacterized protein LOC111019598 [Momordica charantia] | [more] |
KAA0026100.1 | 4.4e-59 | 47.18 | uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 3.8e-13 | 25.08 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.3e-05 | 21.61 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D5J0 | 1.2e-83 | 89.19 | uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
A0A6J1DCW4 | 7.3e-60 | 47.62 | uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A5A7SIT7 | 2.1e-59 | 47.18 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3E3L7 | 2.6e-57 | 52.57 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3C373 | 2.3e-45 | 42.14 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
Match Name | E-value | Identity | Description | |
AT1G34070.1 | 2.5e-04 | 23.93 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |