Moc04g31390 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g31390
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Replication factor C subunit like
Location	chr4: 23575953 .. 23580594 (+)
RNA-Seq Expression	Moc04g31390
Synteny	Moc04g31390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGAAGCAATCGCCGTCATGGATATTGACGACGACCATGGCAACAATGAAGCTGGGAAATCCGTCAAGGGCAAAAACGTCGCTGGTCCTGCCGCCGCACCAGACGGCAAAGCTATACCCTGGGTTGAGAAGTTCCGGCCCAAGTCTCTCGCCGATGTTGCTGCTCACCGTGACATTGTTGACACCAGTAAAGCTTCTACTCCATAAGATAGACTGCTCGATACATTAGGGTTCTCGCTTTCACCGTCCATTCATTAGTTTCCTTCTATTTCCGCGCTCAATCCGAACGTAGGGACCTGTTCGATTTCCTTCTATTTCCACGCTCAATCCGAACGTAGGGACCCGTTCGTAGTTGTATGATTAGATTATGAACGATTTACGACGGGGAATTTATACGTTTGTCGATTCATTTATTGGTTTTGCATGACCCATGTTTGATATTTCTATTCGTATGTTCTTATTTTTACTATCTTCTGGTTTTCCTTCTGTCGCGTGGGATGTTAAATAGTTGACAAGCTGACCAGTGAGAATAGGCTGCCACATCTCCTGTTGTACGGCCCTCCTGGAACTGGCAAGACATCAACTATTCTAGCGGTTGCGCGCAAGCTTTATGGAACGAATTTCCATAACATGATATTGGAGCTAAACGCCTCAGATGATAGAGGGATAGATGTTGTGAGACAGCAGATCCAAGATTTTGCAAGTACCCAAAGCTTTTCATTTGGGTATGTTTAACTCTCTTTCACTCAGTTTCCCACTTGCTTTCCTGGCCAATCAGTCTAAATTTTACAAGATACTCTCTATGACTTTGGGAGTATGTTTCAGAGGTTCATATGTAGTATATTACATGTAGCCATCAATCACTCTGTAAGCAGTGAGCAAACTTCAAAACTATTTCATTTTGATCCATATGATGGTCCATCAGTGTAATGTGTATATAGATCAGGGTAAACCATTCGTTTTAAGTGTCTTACTGACAATTTGTTGGTCTCGGTCGATTGCTTATAGATGCACATCTTGATACAATCCATTTTTTATGTACTTTAAAACATTTAAATTTGCAGGGCAAAAGCATCTGTAAAATTGGTACTGTTGGACGAGGCAGATGCCATGACTAAAGATGCACAGTTTGCTTTACGTAGAGGTCTCTTTTATATGCTGTTGCTCTCATCTTTCTCTCCATCTTTCATCGAGCTACTGTACCATATGCCTATTATTGCTAAATTTTTCTTCATGCAGTGATTGAGAAATATACGAAAAATACAAGGTTTGCCCTTATCTGTAATCACGTCAATAAGATTATTCCAGCATTACAATCGAGGTGTACCCGTTTTCGATTTGCTCCCCTTGATAATTTTAATGTCACTGAACGACTCAGATATGTTATTGAAGCTGAGAGGTACGAAGTCTCCTTTGTTTCACTTGCACTACATACATAAATCTCTTTGTTGCTTACATTTGCGTATGACTAGCAAACATACAACACCTTCATTGATTTGGCTTCTATGTGATATTGATGAGTAATGGTAATTGCCTTAATTTCAGATTCCGATATAAAATTCAATCTATCATTCTAGCTTTGTAAATAGTGGGGCTAGAATGCACAATTTCTGTCTCTCGTGATCTCTTCAAATACCCAGTTAACTAGGGAAATTTGAAGTAGAGTTCATTGAACTTTTTCTTATTATTCAATGGAAATGTAATGCCTATTACACTTGAAGTTTCTATGGGACGTTCTGTTCTACTTTTTGTCCTAGAAAAGAAACATGTAATTCATTGAACCCAGGTTCTTTTTGGAGGTGACGTCAGTTGGATCTCTATATTGTTTGAAGGTTTTCTACTGGATTGTTCCTCTCTCTCTCTCTATAATAATTTTAAGAATCAATGTTGTGCCATGACACTTGAACTTCTGTCTAATGCTCTATACCTGAATGGCAATCAGGTTGGACGTCACTGAGAGTGGCTTAGCAGCTCTTGTTCGACTTTGCAATGGTGATATGAGAAAGGCTCTAAACATTCTTCAGGTCAGAGTTCTTACTATTTTCTGGCATTGGTGGCATTGCAGTAGCTATTAGGTCAGAATAAAATGACGACTTAATTTATTAGAATTAACATATATGGAAGTATAAATAGGACTCTAAACATAGCTCAATGGTAATTGACATATATCTCTAACCATGAGATTGTGAGTTCGATCCCCCACCCCCACATGTTGTACTAAAAAATAGGACTCTAAACATACCATGTCAGTGATATGAGATGCAGGTCAAATTTCCCCTGTATTAAAGATTAAGAGTGTGATTTCCTGTTCATAATCACCGTTAAAGTGGTTTTTCCCCTCTCCATTTTCACCCTCACCTTGTTAACTAGTAACAGTTCTAGACTGTAGAGATACACGTTCATCATTACTTGAACATTTGGAAGAAGTTTCAAGAGCTTAAACTTTCTATAGCATTCTTAAGATTTCCATGTGTAGAAGTTCATAGAATTGGTGGGCGGGGGTGCCTCGGGTATAGTGGAGCAAACCTCCGACTCCCGGTTATAAAAAAAGGGAAGTAGAACATGTTGACAAAAATGTTTCATAGTATTGAGGTTTGATTTCAAAGGCAACAAAGAAAAGGAAAATAATTCAAATGACTGGAGGGATAATGATCTACAAACCCTGGTTCAATTCCTTTGTTCTGTTAGTTCTATGAAAAATAATCAAAATGTGAATAAGAGAGGTCATAATGCACTCTTAAATCTTCATATTTTGATCTTAATGCACCCTTAAATCAACATGCACTCAGCACTGGTTGCGGTGCATGTAAACATTTTTTTTATAACGCATTGGACTATGTAGATTGATAGATGACATTTACATGTGTTATGTAGCTGTTACTTTGTAATACTGACAACTTTCTTCATATTTTCCATTTTTATGTAGTCAACGCATATGGCTTCTCAGCAAATTACTGAAGAAGCTGTATACCTATGCACAGGAAACCCAATGCCCAAAGACATTGAGCAAATATCATTTTGGCTGCTGAATGAACCATTTGCTGACAGTTTTAAGCGTATATAATTCTCTAAAACTTTCCAATTATTTTGTTGTATTTCGTCAGTTTTATTTATTCTTATTGATCCTTTTTTCAGGAATATCTGAAATGAAGACCAGAAAAGGATTGGCTTTGGTTGATATAGTTAGAGAAGTCACTATGTGAGTGCTTCATCTCATTCTGTATGATTTCTGAGTGATGATATTTGCTCGACTTTCCCAACCGTTCAATTCATGCAGGTTTGTTTTTAGGATCAAGATGCCATCGGATGTAAGAGTTCAGTTGATTAATGATCTGGCTGATATAGAGTATGCATCAATCTCTTCACTTTATATAATTTCTTGTGAAGTTTATTATCTGTAGAAATATGTATAATGCACAAAATAATGGCACCGTTATCAACTTGAACAAACATAGAAAAATACTCAACTCTTTGATGTTGATGTCCACCATTCCATGATTCCATCTTATTTGTCTTGTTCAGCATATATTCTACCATAAATATATTGAAAGGTAAAAACAAAAAACAATTGGGGTTTCTTTTTGTGGGTAGGCAGCAGCTTCCTAAGTTGACAGAAGTATTAGGACATACTAAGCGGAAAAGGACAAGGGAATCTAAGTTTCCTAATCTAACTTCTAAAACATTCTTACTCATCTAATTCTACTTTTGTAAGCCAAAAGTTCTGTTGTATCTTTTAGTTCAATGAATAGAAGGATGTATTTCTCCAGCTGTATTACCTTTATGTGCACTACCATAGAATTATGCTTGCAGTTTCCTTTATGGATAAAGATGAGGGAAATTGTTTCATGATTTGACGTTATCTTCTGATCTTATCTTTTCAACTTGGAAAAAGCCTGATCAACTGCTGGACTTAAAACATAGAATTCTTTCTAACAAAGCGTTGAACATAATCACGACCAACCAATTCGTTGAAAGAGATTTGGCTTATTAGCATATACTAGGATTGCTTGTAAGTTGTAACCTCGCCCAACTGTACAATGAATCTGCTCCACTGATGGATTTGAATAGGTTTAGAGGTTTTCAAAGACCTAAAGATGATAATGAATTGCCATGACATTCTTTTCACCAAGTATTGTATGTAATTCAAACATCGTGGGTTAACCTAATAGTCCTTGGAGCCGGTGAAAGAAAGTATATGACTTAGAGAGAATGAGCCTAGACTATGGTAGCCACTTACATCAGATTTAATATCTTACTAGTTTTTTTAGCAATCAAATGTATCAAGGCCAAGAGTTGTCTTGTGAAATAAATTGAGGTGATGAGCTTAGACTACGGTAGCCACCTACTTTAGATTTAATATCTTACCAGCTTTCTTAACAATCAAATGTATCAAGTCAGGGGTTGTCTCGTGAAATAAATTGAGGTGCCCGCAAGCTAGTCGGCCACTTGGATTAAAAAAAAAAAATCCATGATTGGAGAATATAAATTGAGTTTTTTGAAGTGTCTGAATTAACCAGTTTGATTGGGTGCCATTTGTAGGTACAGGATGAGTTTTGGATGCAATGACAAATTGCAACTCGGATCACTCATCTCATCTTTTACTCGAGCTAGATCTGCACTCGTTGGCGGCGCAGAGTAG

mRNA sequence

ATGTCAGAAGCAATCGCCGTCATGGATATTGACGACGACCATGGCAACAATGAAGCTGGGAAATCCGTCAAGGGCAAAAACGTCGCTGGTCCTGCCGCCGCACCAGACGGCAAAGCTATACCCTGGGTTGAGAAGTTCCGGCCCAAGTCTCTCGCCGATGTTGCTGCTCACCGTGACATTGTTGACACCATTGACAAGCTGACCAGTGAGAATAGGCTGCCACATCTCCTGTTGTACGGCCCTCCTGGAACTGGCAAGACATCAACTATTCTAGCGGTTGCGCGCAAGCTTTATGGAACGAATTTCCATAACATGATATTGGAGCTAAACGCCTCAGATGATAGAGGGATAGATGTTGTGAGACAGCAGATCCAAGATTTTGCAAGTACCCAAAGCTTTTCATTTGGGGCAAAAGCATCTGTAAAATTGGTACTGTTGGACGAGGCAGATGCCATGACTAAAGATGCACAGTTTGCTTTACGTAGAGTGATTGAGAAATATACGAAAAATACAAGGTTTGCCCTTATCTGTAATCACGTCAATAAGATTATTCCAGCATTACAATCGAGGTGTACCCGTTTTCGATTTGCTCCCCTTGATAATTTTAATGTCACTGAACGACTCAGATATGTTATTGAAGCTGAGAGGTTGGACGTCACTGAGAGTGGCTTAGCAGCTCTTGTTCGACTTTGCAATGGTGATATGAGAAAGGCTCTAAACATTCTTCAGTCAACGCATATGGCTTCTCAGCAAATTACTGAAGAAGCTGTATACCTATGCACAGGAAACCCAATGCCCAAAGACATTGAGCAAATATCATTTTGGCTGCTGAATGAACCATTTGCTGACAGTTTTAAGCGAATATCTGAAATGAAGACCAGAAAAGGATTGGCTTTGGTTGATATAGTTAGAGAAGTCACTATGTTTGTTTTTAGGATCAAGATGCCATCGGATGTAAGAGTTCAGTTGATTAATGATCTGGCTGATATAGAGTACAGGATGAGTTTTGGATGCAATGACAAATTGCAACTCGGATCACTCATCTCATCTTTTACTCGAGCTAGATCTGCACTCGTTGGCGGCGCAGAGTAG

Coding sequence (CDS)

ATGTCAGAAGCAATCGCCGTCATGGATATTGACGACGACCATGGCAACAATGAAGCTGGGAAATCCGTCAAGGGCAAAAACGTCGCTGGTCCTGCCGCCGCACCAGACGGCAAAGCTATACCCTGGGTTGAGAAGTTCCGGCCCAAGTCTCTCGCCGATGTTGCTGCTCACCGTGACATTGTTGACACCATTGACAAGCTGACCAGTGAGAATAGGCTGCCACATCTCCTGTTGTACGGCCCTCCTGGAACTGGCAAGACATCAACTATTCTAGCGGTTGCGCGCAAGCTTTATGGAACGAATTTCCATAACATGATATTGGAGCTAAACGCCTCAGATGATAGAGGGATAGATGTTGTGAGACAGCAGATCCAAGATTTTGCAAGTACCCAAAGCTTTTCATTTGGGGCAAAAGCATCTGTAAAATTGGTACTGTTGGACGAGGCAGATGCCATGACTAAAGATGCACAGTTTGCTTTACGTAGAGTGATTGAGAAATATACGAAAAATACAAGGTTTGCCCTTATCTGTAATCACGTCAATAAGATTATTCCAGCATTACAATCGAGGTGTACCCGTTTTCGATTTGCTCCCCTTGATAATTTTAATGTCACTGAACGACTCAGATATGTTATTGAAGCTGAGAGGTTGGACGTCACTGAGAGTGGCTTAGCAGCTCTTGTTCGACTTTGCAATGGTGATATGAGAAAGGCTCTAAACATTCTTCAGTCAACGCATATGGCTTCTCAGCAAATTACTGAAGAAGCTGTATACCTATGCACAGGAAACCCAATGCCCAAAGACATTGAGCAAATATCATTTTGGCTGCTGAATGAACCATTTGCTGACAGTTTTAAGCGAATATCTGAAATGAAGACCAGAAAAGGATTGGCTTTGGTTGATATAGTTAGAGAAGTCACTATGTTTGTTTTTAGGATCAAGATGCCATCGGATGTAAGAGTTCAGTTGATTAATGATCTGGCTGATATAGAGTACAGGATGAGTTTTGGATGCAATGACAAATTGCAACTCGGATCACTCATCTCATCTTTTACTCGAGCTAGATCTGCACTCGTTGGCGGCGCAGAGTAG

Protein sequence

MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALVDIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVGGAE

Homology

[Close]

BLAST of Moc04g31390 vs. NCBI nr
Match: XP_022141412.1 (replication factor C subunit 3 [Momordica charantia])

HSP 1 Score: 713.8 bits (1841), Expect = 7.7e-202
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI
Sbjct: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV
Sbjct: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV
Sbjct: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG
Sbjct: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360

Query: 361 GAE 364
           GAE
Sbjct: 361 GAE 363

[Close]

BLAST of Moc04g31390 vs. NCBI nr
Match: XP_038886416.1 (replication factor C subunit 3 [Benincasa hispida])

HSP 1 Score: 677.6 bits (1747), Expect = 6.1e-191
Identity = 342/363 (94.21%), Postives = 355/363 (97.80%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           MSE IAVMDIDDD+GNNEA K VKGKNVA PAAAPDGKAIPWVEKFRPKSLADVAAHRDI
Sbjct: 1   MSEVIAVMDIDDDNGNNEAEKPVKGKNVASPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTN+ NMILELNASDDRGIDVV
Sbjct: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYQNMILELNASDDRGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLDNF+VTERL+YVIEAERLDVTESGLAALVRLC+GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFHVTERLKYVIEAERLDVTESGLAALVRLCSGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMASQ ITEEAVYLCTGNPMPKDIEQISFWLLNEPF+DSFKRISE+KTRKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DIVREVT+FVF++KMPSD+RV+LINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALV 
Sbjct: 301 DIVREVTLFVFKLKMPSDIRVRLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVA 360

Query: 361 GAE 364
            A+
Sbjct: 361 AAQ 363

[Close]

BLAST of Moc04g31390 vs. NCBI nr
Match: XP_022939828.1 (replication factor C subunit 3-like [Cucurbita moschata])

HSP 1 Score: 677.2 bits (1746), Expect = 8.0e-191
Identity = 343/363 (94.49%), Postives = 354/363 (97.52%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           MSEAIAVMDIDDD+GNNE  KSV+GKNVAGPA APDGKAIPWVEKFRPKSLADVAAHRDI
Sbjct: 1   MSEAIAVMDIDDDNGNNEDEKSVEGKNVAGPADAPDGKAIPWVEKFRPKSLADVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTN+HNMILELNASDDRGIDVV
Sbjct: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLDN +VTERLRYVIEAERLDVTESGLAALVRLC GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNVHVTERLRYVIEAERLDVTESGLAALVRLCTGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMASQ ITEEAVYLCTGNP+PKDIEQISFWLLNEPF+DSFKRI E+KTRKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPLPKDIEQISFWLLNEPFSDSFKRIYEIKTRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DIVREVT+FVF+IKMPSDVRVQL+NDLADIEYRMSFGCNDKLQLGSLISSFTRARSALV 
Sbjct: 301 DIVREVTLFVFKIKMPSDVRVQLVNDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVA 360

Query: 361 GAE 364
            A+
Sbjct: 361 AAQ 363

[Close]

BLAST of Moc04g31390 vs. NCBI nr
Match: XP_004149801.1 (replication factor C subunit 3 [Cucumis sativus] >KGN47708.1 hypothetical protein Csa_018322 [Cucumis sativus])

HSP 1 Score: 675.2 bits (1741), Expect = 3.0e-190
Identity = 340/363 (93.66%), Postives = 355/363 (97.80%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           MSE I+VMDIDDD+GNNEA K+VKGKNVA PAAAP+GKAIPWVEKFRPKSLADVAAHRDI
Sbjct: 1   MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTN+HNMILELNASDDRGIDVV
Sbjct: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLDNF+VTERLRYVIEAERLDVTE GLAALVRLC GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMASQ ITEEAVYLCTGNPMPKDIEQISFWLLNEPF+DSFKRISE+KTRKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DIVREVT+FVF+I+MPS++RVQLINDLADIEYRM+FGCNDKLQLGSLISSFT ARSALVG
Sbjct: 301 DIVREVTLFVFKIEMPSNIRVQLINDLADIEYRMTFGCNDKLQLGSLISSFTGARSALVG 360

Query: 361 GAE 364
            A+
Sbjct: 361 AAQ 363

[Close]

BLAST of Moc04g31390 vs. NCBI nr
Match: XP_008466735.1 (PREDICTED: replication factor C subunit 5 [Cucumis melo] >KAA0055454.1 replication factor C subunit 5 [Cucumis melo var. makuwa])

HSP 1 Score: 675.2 bits (1741), Expect = 3.0e-190
Identity = 341/363 (93.94%), Postives = 355/363 (97.80%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           MSE I+VMDIDDD+GNNEA K+VKGKNVA PAAAP+ KAIPWVEKFRPKSLADVAAHRDI
Sbjct: 1   MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEVKAIPWVEKFRPKSLADVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTN+HNMILELNASDDRGIDVV
Sbjct: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFASTQSFSFG KASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLDNF+VTERLRYVIEAERLDVTESGLAALVRLC+GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTESGLAALVRLCSGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMASQ ITEEAVYLCTGNPMPKDIEQISFWLLNEPF+DSFKRISE+KTRKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DIVREVT+FVF+IKMPS++RVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALV 
Sbjct: 301 DIVREVTLFVFKIKMPSNIRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVA 360

Query: 361 GAE 364
            A+
Sbjct: 361 AAQ 363

[Close]

BLAST of Moc04g31390 vs. ExPASy Swiss-Prot
Match: Q6YZ54 (Replication factor C subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC3 PE=2 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 8.7e-156
Identity = 279/362 (77.07%), Postives = 319/362 (88.12%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           M+ A A   +D D      G + KGK  A  ++ P G+A PWVEK+RP+SL DVAAHRDI
Sbjct: 1   MAGATAATPMDIDAAAPPPGAAAKGK--APLSSTPGGRAAPWVEKYRPQSLGDVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTID+LT+ENRLPHLLLYGPPGTGKTSTILAVARKLYG+ + NMILELNASD+RGIDVV
Sbjct: 61  VDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFAS +S SFGAK SVK+VLLDEADAMTKDAQFALRRVIEK+T++TRFALICNHV
Sbjct: 121 RQQIQDFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLD  +V ERL+++I++E LDV + GL ALVRL NGDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMAS+QITEEAVYLCTGNPMPKDIEQI++WLLNE F+ SFK IS+MK RKGLALV
Sbjct: 241 ILQSTHMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DI+REVTMFVF+I+MPSDVR++LINDLADIEYR+SF CNDKLQLG+LIS+FT AR+A+V 
Sbjct: 301 DIIREVTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMVA 360

Query: 361 GA 363
            A
Sbjct: 361 AA 360

[Close]

BLAST of Moc04g31390 vs. ExPASy Swiss-Prot
Match: Q9CAQ8 (Replication factor C subunit 5 OS=Arabidopsis thaliana OX=3702 GN=RFC5 PE=1 SV=1)

HSP 1 Score: 545.0 bits (1403), Expect = 6.2e-154
Identity = 282/372 (75.81%), Postives = 323/372 (86.83%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSV-KGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRD 60
           M+E  + MDID D    +  K + KGK+V G    P  KA PWVEK+RP+SL DVAAHRD
Sbjct: 1   MTELTSAMDIDVD--EIQPRKPINKGKDVVGFGPPPQSKATPWVEKYRPQSLDDVAAHRD 60

Query: 61  IVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDV 120
           I+DTID+LT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG  + NMILELNASDDRGIDV
Sbjct: 61  IIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDV 120

Query: 121 VRQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNH 180
           VRQQIQDFASTQSFS G K+SVKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALI NH
Sbjct: 121 VRQQIQDFASTQSFSLG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNH 180

Query: 181 VNKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKAL 240
           VNKIIPALQSRCTRFRFAPLD  ++++RL++VIEAERL V++ GLAALVRL NGDMRKAL
Sbjct: 181 VNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSDCGLAALVRLSNGDMRKAL 240

Query: 241 NILQSTHMA--------SQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEM 300
           NILQSTHMA        S+QITEE VYLCTGNP+PKDIEQIS WLLN+PF + +K +SE+
Sbjct: 241 NILQSTHMASKEITEEESKQITEEDVYLCTGNPLPKDIEQISHWLLNKPFDECYKDVSEI 300

Query: 301 KTRKGLALVDIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSF 360
           KTRKGLA+VDIV+E+T+F+F+IKMPS VRVQLINDLADIEYR+SFGCNDKLQLG++IS+F
Sbjct: 301 KTRKGLAIVDIVKEITLFIFKIKMPSAVRVQLINDLADIEYRLSFGCNDKLQLGAIISTF 360

Query: 361 TRARSALVGGAE 364
           T ARS +VG A+
Sbjct: 361 THARSIIVGAAK 369

[Close]

BLAST of Moc04g31390 vs. ExPASy Swiss-Prot
Match: Q9D0F6 (Replication factor C subunit 5 OS=Mus musculus OX=10090 GN=Rfc5 PE=1 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 8.3e-106
Identity = 195/331 (58.91%), Postives = 252/331 (76.13%), Query Frame = 0


Query: 33  AAPDGKAIPWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILA 92
           AA   + +PWVEK+RP++LAD+ +H+DI+ TI K  SE+RLPHLLLYGPPGTGKTSTILA
Sbjct: 12  AAARARNLPWVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKTSTILA 71

Query: 93  VARKLY-GTNFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADA 152
            A++LY    F +M+LELNASDDRGID+VR  I  FAST++     K   KLV+LDEADA
Sbjct: 72  CAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTI---FKKGFKLVILDEADA 131

Query: 153 MTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFNVTERLRYV 212
           MT+DAQ ALRRVIEK+T+NTRF LICN+++KIIPALQSRCTRFRF PL    +  RL +V
Sbjct: 132 MTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHV 191

Query: 213 IEAERLDVTESGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEQ 272
           ++ E +D++E G+ ALV L +GDMR+ALNILQST+MA  ++TEE VY CTG+P+  DI  
Sbjct: 192 VQEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKTDIAN 251

Query: 273 ISFWLLNEPFADSFKRISEMKTRKGLALVDIVREVTMFVFRIKMPSDVRVQLINDLADIE 332
           I  W+LN+ F  ++K I E+KT KGLAL DI+ EV +FV R+  PS VR+ L+  +ADIE
Sbjct: 252 ILDWMLNQDFTTAYKNIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHLLTKMADIE 311

Query: 333 YRMSFGCNDKLQLGSLISSFTRARSALVGGA 363
           YR+S G ++K+QL SLI++F   R  +V  A
Sbjct: 312 YRLSVGTSEKIQLSSLIAAFQVTRDLIVAEA 339

[Close]

BLAST of Moc04g31390 vs. ExPASy Swiss-Prot
Match: P40937 (Replication factor C subunit 5 OS=Homo sapiens OX=9606 GN=RFC5 PE=1 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.4e-105
Identity = 192/331 (58.01%), Postives = 253/331 (76.44%), Query Frame = 0


Query: 33  AAPDGKAIPWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILA 92
           AA   + +PWVEK+RP++L D+ +H+DI+ TI K  +E+RLPHLLLYGPPGTGKTSTILA
Sbjct: 13  AATKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFINEDRLPHLLLYGPPGTGKTSTILA 72

Query: 93  VARKLY-GTNFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADA 152
            A++LY    F +M+LELNASDDRGID++R  I  FAST++     K   KLV+LDEADA
Sbjct: 73  CAKQLYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTI---FKKGFKLVILDEADA 132

Query: 153 MTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFNVTERLRYV 212
           MT+DAQ ALRRVIEK+T+NTRF LICN+++KIIPALQSRCTRFRF PL    +  RL +V
Sbjct: 133 MTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHV 192

Query: 213 IEAERLDVTESGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEQ 272
           +E E++D++E G+ ALV L +GDMR+ALNILQST+MA  ++TEE VY CTG+P+  DI  
Sbjct: 193 VEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIAN 252

Query: 273 ISFWLLNEPFADSFKRISEMKTRKGLALVDIVREVTMFVFRIKMPSDVRVQLINDLADIE 332
           I  W+LN+ F  +++ I+E+KT KGLAL DI+ E+ +FV R+  PS VR+ L+  +ADIE
Sbjct: 253 ILDWMLNQDFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLTKMADIE 312

Query: 333 YRMSFGCNDKLQLGSLISSFTRARSALVGGA 363
           YR+S G N+K+QL SLI++F   R  +V  A
Sbjct: 313 YRLSVGTNEKIQLSSLIAAFQVTRDLIVAEA 340

[Close]

BLAST of Moc04g31390 vs. ExPASy Swiss-Prot
Match: Q54ST4 (Probable replication factor C subunit 5 OS=Dictyostelium discoideum OX=44689 GN=rfc5 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.8e-98
Identity = 182/320 (56.88%), Postives = 233/320 (72.81%), Query Frame = 0


Query: 38  KAIPWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKL 97
           +++PWVEK+RPK+L D+ AH DI  TI KL   N LPHLL YGPPGTGKTSTI A+ARKL
Sbjct: 22  ESLPWVEKYRPKNLDDLIAHEDITQTITKLIDNNTLPHLLFYGPPGTGKTSTIQAIARKL 81

Query: 98  YGTNFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQ 157
           YG N+  M+LELNASDDRGIDVVR+QI+ FAS+  F F      KL++LDEAD+MT  AQ
Sbjct: 82  YGDNYSRMVLELNASDDRGIDVVREQIKTFASSM-FFFNTTVPYKLIILDEADSMTNIAQ 141

Query: 158 FALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERL 217
            ALRRVIEKYTK TRF ++CN+V KIIPALQSRCTRFRF+PL       RL+ +IE E +
Sbjct: 142 TALRRVIEKYTKTTRFCIVCNYVIKIIPALQSRCTRFRFSPLPTPPTEIRLKEIIEKENV 201

Query: 218 DVTESGLAALVRLCNGDMRKALNILQSTHMAS--QQITEEAVYLCTGNPMPKDIEQISFW 277
            V    + A++ L  GDMRK LNILQS  M+S    ITEEA+Y CTG PMP DIE +  W
Sbjct: 202 KVDSKAMNAVLELGCGDMRKCLNILQSVSMSSIDNNITEEAIYKCTGYPMPSDIELMVDW 261

Query: 278 LLNEPFADSFKRISEMKTRKGLALVDIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMS 337
           LLN  + ++F+ IS++K +KGL+L DI+  +  FV +I + + +  +L++ L+DIEY +S
Sbjct: 262 LLNSDYEEAFQNISDLKKKKGLSLNDIIATLQKFVVQIDLDNVILCKLLSHLSDIEYNLS 321

Query: 338 FGCNDKLQLGSLISSFTRAR 356
            G ++KLQLGSL+  F  +R
Sbjct: 322 IGSSEKLQLGSLVGCFQLSR 340

[Close]

BLAST of Moc04g31390 vs. ExPASy TrEMBL
Match: A0A6J1CJS3 (replication factor C subunit 3 OS=Momordica charantia OX=3673 GN=LOC111011822 PE=3 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 3.7e-202
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI
Sbjct: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV
Sbjct: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV
Sbjct: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG
Sbjct: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360

Query: 361 GAE 364
           GAE
Sbjct: 361 GAE 363

[Close]

BLAST of Moc04g31390 vs. ExPASy TrEMBL
Match: A0A6J1FMN6 (replication factor C subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445586 PE=3 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 3.9e-191
Identity = 343/363 (94.49%), Postives = 354/363 (97.52%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           MSEAIAVMDIDDD+GNNE  KSV+GKNVAGPA APDGKAIPWVEKFRPKSLADVAAHRDI
Sbjct: 1   MSEAIAVMDIDDDNGNNEDEKSVEGKNVAGPADAPDGKAIPWVEKFRPKSLADVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTN+HNMILELNASDDRGIDVV
Sbjct: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLDN +VTERLRYVIEAERLDVTESGLAALVRLC GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNVHVTERLRYVIEAERLDVTESGLAALVRLCTGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMASQ ITEEAVYLCTGNP+PKDIEQISFWLLNEPF+DSFKRI E+KTRKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPLPKDIEQISFWLLNEPFSDSFKRIYEIKTRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DIVREVT+FVF+IKMPSDVRVQL+NDLADIEYRMSFGCNDKLQLGSLISSFTRARSALV 
Sbjct: 301 DIVREVTLFVFKIKMPSDVRVQLVNDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVA 360

Query: 361 GAE 364
            A+
Sbjct: 361 AAQ 363

[Close]

BLAST of Moc04g31390 vs. ExPASy TrEMBL
Match: A0A5A7UJX6 (Replication factor C subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G00240 PE=3 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.5e-190
Identity = 341/363 (93.94%), Postives = 355/363 (97.80%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           MSE I+VMDIDDD+GNNEA K+VKGKNVA PAAAP+ KAIPWVEKFRPKSLADVAAHRDI
Sbjct: 1   MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEVKAIPWVEKFRPKSLADVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTN+HNMILELNASDDRGIDVV
Sbjct: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFASTQSFSFG KASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLDNF+VTERLRYVIEAERLDVTESGLAALVRLC+GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTESGLAALVRLCSGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMASQ ITEEAVYLCTGNPMPKDIEQISFWLLNEPF+DSFKRISE+KTRKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DIVREVT+FVF+IKMPS++RVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALV 
Sbjct: 301 DIVREVTLFVFKIKMPSNIRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVA 360

Query: 361 GAE 364
            A+
Sbjct: 361 AAQ 363

[Close]

BLAST of Moc04g31390 vs. ExPASy TrEMBL
Match: A0A0A0KDS9 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G382960 PE=3 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.5e-190
Identity = 340/363 (93.66%), Postives = 355/363 (97.80%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           MSE I+VMDIDDD+GNNEA K+VKGKNVA PAAAP+GKAIPWVEKFRPKSLADVAAHRDI
Sbjct: 1   MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTN+HNMILELNASDDRGIDVV
Sbjct: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLDNF+VTERLRYVIEAERLDVTE GLAALVRLC GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMASQ ITEEAVYLCTGNPMPKDIEQISFWLLNEPF+DSFKRISE+KTRKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DIVREVT+FVF+I+MPS++RVQLINDLADIEYRM+FGCNDKLQLGSLISSFT ARSALVG
Sbjct: 301 DIVREVTLFVFKIEMPSNIRVQLINDLADIEYRMTFGCNDKLQLGSLISSFTGARSALVG 360

Query: 361 GAE 364
            A+
Sbjct: 361 AAQ 363

[Close]

BLAST of Moc04g31390 vs. ExPASy TrEMBL
Match: A0A1S3CRX1 (replication factor C subunit 5 OS=Cucumis melo OX=3656 GN=LOC103504076 PE=3 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.5e-190
Identity = 341/363 (93.94%), Postives = 355/363 (97.80%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSVKGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRDI 60
           MSE I+VMDIDDD+GNNEA K+VKGKNVA PAAAP+ KAIPWVEKFRPKSLADVAAHRDI
Sbjct: 1   MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEVKAIPWVEKFRPKSLADVAAHRDI 60

Query: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDVV 120
           VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTN+HNMILELNASDDRGIDVV
Sbjct: 61  VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV 120

Query: 121 RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180
           RQQIQDFASTQSFSFG KASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121 RQQIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 181 NKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKALN 240
           NKIIPALQSRCTRFRFAPLDNF+VTERLRYVIEAERLDVTESGLAALVRLC+GDMRKALN
Sbjct: 181 NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTESGLAALVRLCSGDMRKALN 240

Query: 241 ILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEMKTRKGLALV 300
           ILQSTHMASQ ITEEAVYLCTGNPMPKDIEQISFWLLNEPF+DSFKRISE+KTRKGLALV
Sbjct: 241 ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV 300

Query: 301 DIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVG 360
           DIVREVT+FVF+IKMPS++RVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALV 
Sbjct: 301 DIVREVTLFVFKIKMPSNIRVQLINDLADIEYRMSFGCNDKLQLGSLISSFTRARSALVA 360

Query: 361 GAE 364
            A+
Sbjct: 361 AAQ 363

[Close]

BLAST of Moc04g31390 vs. TAIR 10
Match: AT1G77470.1 (replication factor C subunit 3 )

HSP 1 Score: 545.0 bits (1403), Expect = 4.4e-155
Identity = 282/372 (75.81%), Postives = 323/372 (86.83%), Query Frame = 0


Query: 1   MSEAIAVMDIDDDHGNNEAGKSV-KGKNVAGPAAAPDGKAIPWVEKFRPKSLADVAAHRD 60
           M+E  + MDID D    +  K + KGK+V G    P  KA PWVEK+RP+SL DVAAHRD
Sbjct: 1   MTELTSAMDIDVD--EIQPRKPINKGKDVVGFGPPPQSKATPWVEKYRPQSLDDVAAHRD 60

Query: 61  IVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNFHNMILELNASDDRGIDV 120
           I+DTID+LT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG  + NMILELNASDDRGIDV
Sbjct: 61  IIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAVARKLYGPKYRNMILELNASDDRGIDV 120

Query: 121 VRQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNH 180
           VRQQIQDFASTQSFS G K+SVKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALI NH
Sbjct: 121 VRQQIQDFASTQSFSLG-KSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALIGNH 180

Query: 181 VNKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAERLDVTESGLAALVRLCNGDMRKAL 240
           VNKIIPALQSRCTRFRFAPLD  ++++RL++VIEAERL V++ GLAALVRL NGDMRKAL
Sbjct: 181 VNKIIPALQSRCTRFRFAPLDGVHMSQRLKHVIEAERLVVSDCGLAALVRLSNGDMRKAL 240

Query: 241 NILQSTHMA--------SQQITEEAVYLCTGNPMPKDIEQISFWLLNEPFADSFKRISEM 300
           NILQSTHMA        S+QITEE VYLCTGNP+PKDIEQIS WLLN+PF + +K +SE+
Sbjct: 241 NILQSTHMASKEITEEESKQITEEDVYLCTGNPLPKDIEQISHWLLNKPFDECYKDVSEI 300

Query: 301 KTRKGLALVDIVREVTMFVFRIKMPSDVRVQLINDLADIEYRMSFGCNDKLQLGSLISSF 360
           KTRKGLA+VDIV+E+T+F+F+IKMPS VRVQLINDLADIEYR+SFGCNDKLQLG++IS+F
Sbjct: 301 KTRKGLAIVDIVKEITLFIFKIKMPSAVRVQLINDLADIEYRLSFGCNDKLQLGAIISTF 360

Query: 361 TRARSALVGGAE 364
           T ARS +VG A+
Sbjct: 361 THARSIIVGAAK 369

[Close]

BLAST of Moc04g31390 vs. TAIR 10
Match: AT1G63160.1 (replication factor C 2 )

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-55
Identity = 123/323 (38.08%), Postives = 182/323 (56.35%), Query Frame = 0


Query: 36  DGKAIPWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVAR 95
           DG   PWVEK+RP  + D+  + D V  +  +  +  +P+L+L GPPGTGKT++ILA+A 
Sbjct: 11  DGYNEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAH 70

Query: 96  KLYGTNFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKD 155
           +L GTN+   +LELNASDDRGIDVVR +I+ FA  Q          K+V+LDEAD+MT  
Sbjct: 71  ELLGTNYKEAVLELNASDDRGIDVVRNKIKMFA--QKKVTLPPGRHKVVILDEADSMTSG 130

Query: 156 AQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAE 215
           AQ ALRR IE Y+ +TRFAL CN   KII  +QSRC   RF+ L +  +  RL  V+ AE
Sbjct: 131 AQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVAAE 190

Query: 216 RLDVTESGLAALVRLCNGDMRKALNILQSTHMASQQITEEAVYLCTGNPMPKDIEQISFW 275
           ++     GL A++   +GDMR+ALN LQ+T      + +E V+     P P  ++ I   
Sbjct: 191 KVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLHVKNIVRN 250

Query: 276 LLNEPF---ADSFKRISEMKTRKGLALVDIVREVTMFVFRIKMPSDVRVQLINDLADIEY 335
           +L   F    D  K++ ++    G +  DI+  +   +    M   ++++ + +      
Sbjct: 251 VLESKFDIACDGLKQLYDL----GYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHM 310

Query: 336 RMSFGCNDKLQLGSLISSFTRAR 356
           R+  G    LQL  L++  +  R
Sbjct: 311 RICDGVGSYLQLCGLLAKLSIVR 327

[Close]

BLAST of Moc04g31390 vs. TAIR 10
Match: AT1G21690.1 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 198.7 bits (504), Expect = 7.8e-51
Identity = 120/329 (36.47%), Postives = 186/329 (56.53%), Query Frame = 0


Query: 41  PWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGT 100
           PWVEK+RPK + DVA   ++V  +         PH+L YGPPGTGKT+T LA+A +L+G 
Sbjct: 10  PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 101 N-FHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKA-----SVKLVLLDEADAMTK 160
             + + +LELNASDDRGI+VVR +I+DFA+    S   ++     S K+++LDEAD+MT+
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 129

Query: 161 DAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEA 220
           DAQ ALRR +E Y+K TRF  ICN++++II  L SRC +FRF PL    ++ R+ ++   
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNE 189

Query: 221 ERLDVTESGLAALVRLCNGDMRKALNILQS-THMASQQITEEAVYLCTGNPMPKDIEQIS 280
           E L +    L+ L  +  GD+R+A+  LQS T +    IT   +   +G  +P ++    
Sbjct: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSG-VVPLEVVNKL 249

Query: 281 FWLLNEPFADSFKRISEMKTRKGLALVDIVREVTMFVFRIKMPSDV----RVQLINDLAD 340
           F        D   +  +    +G     I+ +  +F    +  SD+    + ++   LA+
Sbjct: 250 FTACKSGDFDIANKEVDNIVAEGYPASQIINQ--LFDIVAEADSDITDMQKAKICKCLAE 309

Query: 341 IEYRMSFGCNDKLQLGSLISSFTRARSAL 359
            + R+  G ++ LQL  + SS   A S +
Sbjct: 310 TDKRLVDGADEYLQLLDVASSTICALSEM 335

[Close]

BLAST of Moc04g31390 vs. TAIR 10
Match: AT1G21690.4 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 196.4 bits (498), Expect = 3.9e-50
Identity = 120/328 (36.59%), Postives = 184/328 (56.10%), Query Frame = 0


Query: 41  PWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGT 100
           PWVEK+RPK + DVA   ++V  +         PH+L YGPPGTGKT+T LA+A +L+G 
Sbjct: 10  PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFG- 69

Query: 101 NFHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKA-----SVKLVLLDEADAMTKD 160
                +LELNASDDRGI+VVR +I+DFA+    S   ++     S K+++LDEAD+MT+D
Sbjct: 70  -----VLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTED 129

Query: 161 AQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEAE 220
           AQ ALRR +E Y+K TRF  ICN++++II  L SRC +FRF PL    ++ R+ ++   E
Sbjct: 130 AQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEE 189

Query: 221 RLDVTESGLAALVRLCNGDMRKALNILQS-THMASQQITEEAVYLCTGNPMPKDIEQISF 280
            L +    L+ L  +  GD+R+A+  LQS T +    IT   +   +G  +P ++    F
Sbjct: 190 GLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSG-VVPLEVVNKLF 249

Query: 281 WLLNEPFADSFKRISEMKTRKGLALVDIVREVTMFVFRIKMPSDV----RVQLINDLADI 340
                   D   +  +    +G     I+ +  +F    +  SD+    + ++   LA+ 
Sbjct: 250 TACKSGDFDIANKEVDNIVAEGYPASQIINQ--LFDIVAEADSDITDMQKAKICKCLAET 309

Query: 341 EYRMSFGCNDKLQLGSLISSFTRARSAL 359
           + R+  G ++ LQL  + SS   A S +
Sbjct: 310 DKRLVDGADEYLQLLDVASSTICALSEM 328

[Close]

BLAST of Moc04g31390 vs. TAIR 10
Match: AT1G21690.3 (ATPase family associated with various cellular activities (AAA) )

HSP 1 Score: 192.2 bits (487), Expect = 7.3e-49
Identity = 100/220 (45.45%), Postives = 143/220 (65.00%), Query Frame = 0


Query: 41  PWVEKFRPKSLADVAAHRDIVDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGT 100
           PWVEK+RPK + DVA   ++V  +         PH+L YGPPGTGKT+T LA+A +L+G 
Sbjct: 10  PWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGP 69

Query: 101 N-FHNMILELNASDDRGIDVVRQQIQDFASTQSFSFGAKA-----SVKLVLLDEADAMTK 160
             + + +LELNASDDRGI+VVR +I+DFA+    S   ++     S K+++LDEAD+MT+
Sbjct: 70  ELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTE 129

Query: 161 DAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFRFAPLDNFNVTERLRYVIEA 220
           DAQ ALRR +E Y+K TRF  ICN++++II  L SRC +FRF PL    ++ R+ ++   
Sbjct: 130 DAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNE 189

Query: 221 ERLDVTESGLAALVRLCNGDMRKALNILQS-THMASQQIT 254
           E L +    L+ L  +  GD+R+A+  LQS T +    IT
Sbjct: 190 EGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTIT 229

The following BLAST results are available for this feature:

BLAST of Moc04g31390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141412.1	7.7e-202	100.00	replication factor C subunit 3 [Momordica charantia]	[more]
XP_038886416.1	6.1e-191	94.21	replication factor C subunit 3 [Benincasa hispida]	[more]
XP_022939828.1	8.0e-191	94.49	replication factor C subunit 3-like [Cucurbita moschata]	[more]
XP_004149801.1	3.0e-190	93.66	replication factor C subunit 3 [Cucumis sativus] >KGN47708.1 hypothetical protei...	[more]
XP_008466735.1	3.0e-190	93.94	PREDICTED: replication factor C subunit 5 [Cucumis melo] >KAA0055454.1 replicati...	[more]

BLAST of Moc04g31390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YZ54	8.7e-156	77.07	Replication factor C subunit 3 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC3 ...	[more]
Q9CAQ8	6.2e-154	75.81	Replication factor C subunit 5 OS=Arabidopsis thaliana OX=3702 GN=RFC5 PE=1 SV=1	[more]
Q9D0F6	8.3e-106	58.91	Replication factor C subunit 5 OS=Mus musculus OX=10090 GN=Rfc5 PE=1 SV=1	[more]
P40937	2.4e-105	58.01	Replication factor C subunit 5 OS=Homo sapiens OX=9606 GN=RFC5 PE=1 SV=1	[more]
Q54ST4	2.8e-98	56.88	Probable replication factor C subunit 5 OS=Dictyostelium discoideum OX=44689 GN=...	[more]

BLAST of Moc04g31390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJS3	3.7e-202	100.00	replication factor C subunit 3 OS=Momordica charantia OX=3673 GN=LOC111011822 PE...	[more]
A0A6J1FMN6	3.9e-191	94.49	replication factor C subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC11144558...	[more]
A0A5A7UJX6	1.5e-190	93.94	Replication factor C subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0KDS9	1.5e-190	93.66	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G382960 PE=3 SV...	[more]
A0A1S3CRX1	1.5e-190	93.94	replication factor C subunit 5 OS=Cucumis melo OX=3656 GN=LOC103504076 PE=3 SV=1	[more]

BLAST of Moc04g31390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77470.1	4.4e-155	75.81	replication factor C subunit 3	[more]
AT1G63160.1	1.1e-55	38.08	replication factor C 2	[more]
AT1G21690.1	7.8e-51	36.47	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.4	3.9e-50	36.59	ATPase family associated with various cellular activities (AAA)	[more]
AT1G21690.3	7.3e-49	45.45	ATPase family associated with various cellular activities (AAA)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 72..202 e-value: 9.5E-12 score: 55.0
None	No IPR available	GENE3D	1.20.272.10		coord: 264..359 e-value: 4.1E-30 score: 105.6
None	No IPR available	GENE3D	1.10.8.60		coord: 202..263 e-value: 1.8E-23 score: 83.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..34
None	No IPR available	PANTHER	PTHR11669:SF9	REPLICATION FACTOR C SUBUNIT 5	coord: 37..358
None	No IPR available	PANTHER	PTHR11669	REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT	coord: 37..358
None	No IPR available	CDD	cd18140	HLD_clamp_RFC	coord: 203..261 e-value: 1.36797E-18 score: 76.7989
None	No IPR available	CDD	cd00009	AAA	coord: 60..198 e-value: 6.66193E-23 score: 91.4387
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 36..198 e-value: 1.1E-52 score: 180.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 40..257
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 76..196 e-value: 2.1E-16 score: 60.5
IPR013748	Replication factor C, C-terminal	PFAM	PF08542	Rep_fac_C	coord: 264..350 e-value: 1.2E-16 score: 60.9
IPR008921	DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal	SUPERFAMILY	48019	post-AAA+ oligomerization domain-like	coord: 264..354

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g31390.1	Moc04g31390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005663	DNA replication factor C complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003689	DNA clamp loader activity