Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGCCACAAATCAGACACCAACAAAACGAATCCCCGAAAGGATGGAGTAATCATCACTGTGTACGTTGAATCCCCCAAATCGCATAACAATTCCCATCAAAACAGGGATGCCAATGCCCTCAACAAAATTAACCCCAAATCCAGAGGCAGAGGCTACGACCGCCGGGCCCAGCTCCTCGCATACTCTCGCGACCTCAGAAACCTCGATTCTCCTCTCAAACCCAAGGTCTGTCTCCGTCTCTGCCTCTGTGTTGCTTCGTTTTAATTTCATTTTTGAGTAGGAATTGAAAAGATCGATAAATTAAAATGCTGCGTACGTACAGAAATGGAAACTGAAGGTGAGATCGGAGACACGGTATGAACGGGTGGGGATGGGGAGAGAGGATAGAGCAGAGGTGGTGGATCAGCGATGCCGCCCCAAATGCTTCTGCTTCCAAAGCAGGACAAAGAAAGCCACTGGGAAATCGGGTTCTTCCATATTGGTAAATTTCCGGCCGGGAAATGAATACCCACTTGATCAGTTTTTTTGTTTTGTTTTTGACGAGTTGGTTAATGGGTGTTGCGTTTGTGTTGCAGATGAAAATGAAGAGTTTGTTGAGAGAGTTATCAAAGGGGTGTAAACGCAGGAGTGATGATTGA
mRNA sequence
ATGGAGGGCCACAAATCAGACACCAACAAAACGAATCCCCGAAAGGATGGAGTAATCATCACTGTGTACGTTGAATCCCCCAAATCGCATAACAATTCCCATCAAAACAGGGATGCCAATGCCCTCAACAAAATTAACCCCAAATCCAGAGGCAGAGGCTACGACCGCCGGGCCCAGCTCCTCGCATACTCTCGCGACCTCAGAAACCTCGATTCTCCTCTCAAACCCAAGAAATGGAAACTGAAGGTGAGATCGGAGACACGGTATGAACGGGTGGGGATGGGGAGAGAGGATAGAGCAGAGGTGGTGGATCAGCGATGCCGCCCCAAATGCTTCTGCTTCCAAAGCAGGACAAAGAAAGCCACTGGGAAATCGGGTTCTTCCATATTGATGAAAATGAAGAGTTTGTTGAGAGAGTTATCAAAGGGGTGTAAACGCAGGAGTGATGATTGA
Coding sequence (CDS)
ATGGAGGGCCACAAATCAGACACCAACAAAACGAATCCCCGAAAGGATGGAGTAATCATCACTGTGTACGTTGAATCCCCCAAATCGCATAACAATTCCCATCAAAACAGGGATGCCAATGCCCTCAACAAAATTAACCCCAAATCCAGAGGCAGAGGCTACGACCGCCGGGCCCAGCTCCTCGCATACTCTCGCGACCTCAGAAACCTCGATTCTCCTCTCAAACCCAAGAAATGGAAACTGAAGGTGAGATCGGAGACACGGTATGAACGGGTGGGGATGGGGAGAGAGGATAGAGCAGAGGTGGTGGATCAGCGATGCCGCCCCAAATGCTTCTGCTTCCAAAGCAGGACAAAGAAAGCCACTGGGAAATCGGGTTCTTCCATATTGATGAAAATGAAGAGTTTGTTGAGAGAGTTATCAAAGGGGTGTAAACGCAGGAGTGATGATTGA
Protein sequence
MEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQLLAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREDRAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD
Homology
BLAST of Moc04g30840 vs. NCBI nr
Match:
XP_022141611.1 (uncharacterized protein LOC111011926 [Momordica charantia])
HSP 1 Score: 300.4 bits (768), Expect = 8.4e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query: 1 MEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQL 60
MEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQL
Sbjct: 53 MEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQL 112
Query: 61 LAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREDRAEVVDQRCRPKCFCFQSRTKK 120
LAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREDRAEVVDQRCRPKCFCFQSRTKK
Sbjct: 113 LAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREDRAEVVDQRCRPKCFCFQSRTKK 172
Query: 121 ATGKSGSSILMKMKSLLRELSKGCKRRSDD 151
ATGKSGSSILMKMKSLLRELSKGCKRRSDD
Sbjct: 173 ATGKSGSSILMKMKSLLRELSKGCKRRSDD 202
BLAST of Moc04g30840 vs. NCBI nr
Match:
XP_008460454.1 (PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo])
HSP 1 Score: 139.4 bits (350), Expect = 2.5e-29
Identity = 96/180 (53.33%), Postives = 110/180 (61.11%), Query Frame = 0
Query: 1 MEGHKSDTNKTNPRKDGVIITVYVESPKSHN-NSHQNR--DANALNKINPK------SRG 60
M+ H ++ +T P+K VIITVYVESPK N NSH+ + N N INPK
Sbjct: 43 MQSH-TNNYQTLPKKQEVIITVYVESPKLQNSNSHKTQIIPHNNNNHINPKPSLPKTPNS 102
Query: 61 RGYDRRAQLLAYSRDLRNLDS------PLKPKKWKLKVRSET---------------RYE 120
GYDRRAQLLAYSR LRN+ S K KKWK KVRSE RYE
Sbjct: 103 TGYDRRAQLLAYSRHLRNVHSSNTQSPQPKSKKWKWKVRSEAPTVRRMPSRRALQRWRYE 162
Query: 121 RVGMGREDRAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD 151
RVGM RE+R EVVDQ CRPKC +S KK+T +SGSSI K+KSLL ELSKGCKR +D
Sbjct: 163 RVGMMREERTEVVDQPCRPKCLGGRS-NKKSTSRSGSSIFRKLKSLLGELSKGCKRSGED 220
BLAST of Moc04g30840 vs. NCBI nr
Match:
XP_038874461.1 (uncharacterized protein LOC120067113 [Benincasa hispida])
HSP 1 Score: 137.9 bits (346), Expect = 7.2e-29
Identity = 94/174 (54.02%), Postives = 111/174 (63.79%), Query Frame = 0
Query: 1 MEGHKSDTNKTNPRKDGVIITVYVESPK-SHNNSHQ-----NRDANALNKINPKS-RGRG 60
M+ H ++ N+T P+K GVIITVYVESPK NNSH+ + + N N PK+ G
Sbjct: 57 MQTH-TNNNQTIPQKQGVIITVYVESPKLQDNNSHKPPIIPHNNINNPNSALPKTPNSTG 116
Query: 61 YDRRAQLLAYSRDLRNLDSPL------KPKKWKLKVRSET---------------RYERV 120
YDRRAQLLAYSR LRN +S L + KKWK +VRSE RYERV
Sbjct: 117 YDRRAQLLAYSRHLRNQNSSLSQSSKTESKKWKWRVRSEAPAVRRMPSRRALQRWRYERV 176
Query: 121 GMGREDRAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 147
GM RE+ EVVDQ CRPKCF +S +KK+T KSGSSI K+KSLL ELS GCKR
Sbjct: 177 GMMREETTEVVDQPCRPKCFGGKS-SKKSTVKSGSSIFRKLKSLLGELSNGCKR 228
BLAST of Moc04g30840 vs. NCBI nr
Match:
XP_004140323.1 (uncharacterized protein LOC101218772 [Cucumis sativus] >KGN50983.1 hypothetical protein Csa_008362 [Cucumis sativus])
HSP 1 Score: 135.2 bits (339), Expect = 4.7e-28
Identity = 89/180 (49.44%), Postives = 107/180 (59.44%), Query Frame = 0
Query: 1 MEGHKSDTNKTNPRKDGVIITVYVESPKSHNNS---------HQNRDANALNKINPKSRG 60
M+ H ++ +T P+K VIITVYVESPK N++ + N ++N +
Sbjct: 6 MQSH-TNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRKTPNS 65
Query: 61 RGYDRRAQLLAYSRDLRNLDS------PLKPKKWKLKVRSET---------------RYE 120
GYDRRAQLLAYSR LRN+ S K KKWK KVRSE RYE
Sbjct: 66 TGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSKKWKWKVRSEAPTVRRMPSRRALQRWRYE 125
Query: 121 RVGMGREDRAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD 151
RVGM RE+R EVVDQ CRPKC +S KK+T +SGSSI K+KSLL ELSKGCKR +D
Sbjct: 126 RVGMMREERTEVVDQPCRPKCLGGRS-NKKSTSRSGSSIFRKLKSLLGELSKGCKRSGED 183
BLAST of Moc04g30840 vs. NCBI nr
Match:
XP_023546181.1 (uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 127.1 bits (318), Expect = 1.3e-25
Identity = 82/160 (51.25%), Postives = 103/160 (64.38%), Query Frame = 0
Query: 10 KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPKS-RGRGYDRRAQLLAYS 69
K P K+ VIITVYVESP K N SHQN + N+ +PK+ + RGYDRRA+LLAYS
Sbjct: 11 KAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAHPKAPKSRGYDRRAELLAYS 70
Query: 70 RDLRNLDS-----PLKPKKWKLKVRS-------------ETRYERVGMGREDRAEVVDQR 129
R+LRN+DS P KW++K + + RYERVGM RE+R EVV+QR
Sbjct: 71 RELRNVDSGTTHLPKTKSKWRVKSETAAVRRIPSKRGLRQGRYERVGMTREERTEVVEQR 130
Query: 130 CRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 147
C PK CF K+++G+ GSSIL K+KSL+ LSKGCKR
Sbjct: 131 CLPK--CFNGDDKRSSGRLGSSILRKLKSLMGGLSKGCKR 168
BLAST of Moc04g30840 vs. ExPASy TrEMBL
Match:
A0A6J1CJQ0 (uncharacterized protein LOC111011926 OS=Momordica charantia OX=3673 GN=LOC111011926 PE=4 SV=1)
HSP 1 Score: 300.4 bits (768), Expect = 4.1e-78
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
Query: 1 MEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQL 60
MEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQL
Sbjct: 53 MEGHKSDTNKTNPRKDGVIITVYVESPKSHNNSHQNRDANALNKINPKSRGRGYDRRAQL 112
Query: 61 LAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREDRAEVVDQRCRPKCFCFQSRTKK 120
LAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREDRAEVVDQRCRPKCFCFQSRTKK
Sbjct: 113 LAYSRDLRNLDSPLKPKKWKLKVRSETRYERVGMGREDRAEVVDQRCRPKCFCFQSRTKK 172
Query: 121 ATGKSGSSILMKMKSLLRELSKGCKRRSDD 151
ATGKSGSSILMKMKSLLRELSKGCKRRSDD
Sbjct: 173 ATGKSGSSILMKMKSLLRELSKGCKRRSDD 202
BLAST of Moc04g30840 vs. ExPASy TrEMBL
Match:
A0A1S3CDS3 (uncharacterized protein LOC103499268 OS=Cucumis melo OX=3656 GN=LOC103499268 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 96/180 (53.33%), Postives = 110/180 (61.11%), Query Frame = 0
Query: 1 MEGHKSDTNKTNPRKDGVIITVYVESPKSHN-NSHQNR--DANALNKINPK------SRG 60
M+ H ++ +T P+K VIITVYVESPK N NSH+ + N N INPK
Sbjct: 43 MQSH-TNNYQTLPKKQEVIITVYVESPKLQNSNSHKTQIIPHNNNNHINPKPSLPKTPNS 102
Query: 61 RGYDRRAQLLAYSRDLRNLDS------PLKPKKWKLKVRSET---------------RYE 120
GYDRRAQLLAYSR LRN+ S K KKWK KVRSE RYE
Sbjct: 103 TGYDRRAQLLAYSRHLRNVHSSNTQSPQPKSKKWKWKVRSEAPTVRRMPSRRALQRWRYE 162
Query: 121 RVGMGREDRAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD 151
RVGM RE+R EVVDQ CRPKC +S KK+T +SGSSI K+KSLL ELSKGCKR +D
Sbjct: 163 RVGMMREERTEVVDQPCRPKCLGGRS-NKKSTSRSGSSIFRKLKSLLGELSKGCKRSGED 220
BLAST of Moc04g30840 vs. ExPASy TrEMBL
Match:
A0A0A0KN34 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G385350 PE=4 SV=1)
HSP 1 Score: 135.2 bits (339), Expect = 2.3e-28
Identity = 89/180 (49.44%), Postives = 107/180 (59.44%), Query Frame = 0
Query: 1 MEGHKSDTNKTNPRKDGVIITVYVESPKSHNNS---------HQNRDANALNKINPKSRG 60
M+ H ++ +T P+K VIITVYVESPK N++ + N ++N +
Sbjct: 6 MQSH-TNNYQTLPKKQEVIITVYVESPKLQNSNPHKTPIVPHNNNNNSNPKPSLRKTPNS 65
Query: 61 RGYDRRAQLLAYSRDLRNLDS------PLKPKKWKLKVRSET---------------RYE 120
GYDRRAQLLAYSR LRN+ S K KKWK KVRSE RYE
Sbjct: 66 TGYDRRAQLLAYSRHLRNVHSSNTQSPKPKSKKWKWKVRSEAPTVRRMPSRRALQRWRYE 125
Query: 121 RVGMGREDRAEVVDQRCRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKRRSDD 151
RVGM RE+R EVVDQ CRPKC +S KK+T +SGSSI K+KSLL ELSKGCKR +D
Sbjct: 126 RVGMMREERTEVVDQPCRPKCLGGRS-NKKSTSRSGSSIFRKLKSLLGELSKGCKRSGED 183
BLAST of Moc04g30840 vs. ExPASy TrEMBL
Match:
A0A6J1JSH9 (uncharacterized protein LOC111487148 OS=Cucurbita maxima OX=3661 GN=LOC111487148 PE=4 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25
Identity = 85/160 (53.12%), Postives = 103/160 (64.38%), Query Frame = 0
Query: 10 KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPK-SRGRGYDRRAQLLAYS 69
K P K+ VIITVYVESP K N SHQN + N+ PK ++ RGYDRRA+LLAYS
Sbjct: 11 KAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAPPKATKSRGYDRRAELLAYS 70
Query: 70 RDLRNLDSP---LKPKKWKLKVRSET---------------RYERVGMGREDRAEVVDQR 129
R+LRN+DS L K K +V+SET RYERVGM RE+R EVV+QR
Sbjct: 71 RELRNVDSATTHLPKTKSKWRVKSETAAVRRIPSRRGLRQGRYERVGMMREERTEVVEQR 130
Query: 130 CRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 147
C PK CF K+++G+ GSSIL K+KSL+ LSKGCKR
Sbjct: 131 CLPK--CFNGDDKRSSGRLGSSILRKLKSLMGGLSKGCKR 168
BLAST of Moc04g30840 vs. ExPASy TrEMBL
Match:
A0A6J1HCQ4 (uncharacterized protein LOC111462789 OS=Cucurbita moschata OX=3662 GN=LOC111462789 PE=4 SV=1)
HSP 1 Score: 124.4 bits (311), Expect = 4.0e-25
Identity = 84/160 (52.50%), Postives = 103/160 (64.38%), Query Frame = 0
Query: 10 KTNPRKDGVIITVYVESP-KSHNNSHQNR---DANALNKINPKS-RGRGYDRRAQLLAYS 69
K P K+ VIITVYVESP K N SHQN + N+ +PK+ + RGYDRRA+LLAYS
Sbjct: 11 KAIPPKERVIITVYVESPRKQSNKSHQNPISINKNSHPNAHPKAPKSRGYDRRAELLAYS 70
Query: 70 RDLRNLDSP---LKPKKWKLKVRSET---------------RYERVGMGREDRAEVVDQR 129
R+LRN+DS L K K +V+SET RYERVGM RE+R EVV+QR
Sbjct: 71 RELRNVDSATTHLPKTKSKWRVKSETAAVRRLPSRRGLRQGRYERVGMMREERTEVVEQR 130
Query: 130 CRPKCFCFQSRTKKATGKSGSSILMKMKSLLRELSKGCKR 147
C PK CF K+++G+ GSSIL K+KSL+ LS GCKR
Sbjct: 131 CLPK--CFNGDYKRSSGRLGSSILRKLKSLMGGLSMGCKR 168
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022141611.1 | 8.4e-78 | 100.00 | uncharacterized protein LOC111011926 [Momordica charantia] | [more] |
| XP_008460454.1 | 2.5e-29 | 53.33 | PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo] | [more] |
| XP_038874461.1 | 7.2e-29 | 54.02 | uncharacterized protein LOC120067113 [Benincasa hispida] | [more] |
| XP_004140323.1 | 4.7e-28 | 49.44 | uncharacterized protein LOC101218772 [Cucumis sativus] >KGN50983.1 hypothetical ... | [more] |
| XP_023546181.1 | 1.3e-25 | 51.25 | uncharacterized protein LOC111805357 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1CJQ0 | 4.1e-78 | 100.00 | uncharacterized protein LOC111011926 OS=Momordica charantia OX=3673 GN=LOC111011... | [more] |
| A0A1S3CDS3 | 1.2e-29 | 53.33 | uncharacterized protein LOC103499268 OS=Cucumis melo OX=3656 GN=LOC103499268 PE=... | [more] |
| A0A0A0KN34 | 2.3e-28 | 49.44 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G385350 PE=4 SV=1 | [more] |
| A0A6J1JSH9 | 1.4e-25 | 53.13 | uncharacterized protein LOC111487148 OS=Cucurbita maxima OX=3661 GN=LOC111487148... | [more] |
| A0A6J1HCQ4 | 4.0e-25 | 52.50 | uncharacterized protein LOC111462789 OS=Cucurbita moschata OX=3662 GN=LOC1114627... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
