Moc04g30250 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g30250
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	glutamate decarboxylase
Location	chr4: 22619555 .. 22620181 (+)
RNA-Seq Expression	Moc04g30250
Synteny	Moc04g30250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCTCTCCAAGACTGCCTCTCAGACCGACGTCTCCGTCCACTCCACCTTCGCTTCTCGCTATGTCCGCACCTCTCTCCCGAGGTAATCATCCATTAATCACTGATCTGATCCATTCAATCTGTCCTTCGTTTTGTTTTTTCCGTTCGATTAGATCTCGAAATCGAAATCACTGGTTGTGTGCGATTTGATTTGTGCTTCATGATCCGGATCGGATTAATTTGATTGTCCTGTTTTCCGCAGATTCAAAATGCCGGAAAATTCGATTCCGAAGGAGGCCGCGTACCAGATCATCAACGACGAACTCATGCTCGATGGAAACCCTAGGCTCAACTTGGCCTCCTTTGTCACCACTTGGATGGAGCCTGAGTGCGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAGTATCCTGTCACTACAGAACTCCAGGCACGTTCCTCTCTCTCTCTCTCTCTCTCTCTACTACTCTTAATCGAAAAGCTTAGATCGATTCGTTGTTGTTCTATCGTTTCCCTCAATGACCATTATCCTCTGGAAATTCTGCAAATTGCAGCGTCGGTCATGGCGGAGTTCTGTTATTTAAAAAGGAGTTTAATTAGATATTGA

mRNA sequence

ATGGTTCTCTCCAAGACTGCCTCTCAGACCGACGTCTCCGTCCACTCCACCTTCGCTTCTCGCTATGTCCGCACCTCTCTCCCGAGATTCAAAATGCCGGAAAATTCGATTCCGAAGGAGGCCGCGTACCAGATCATCAACGACGAACTCATGCTCGATGGAAACCCTAGGCTCAACTTGGCCTCCTTTGTCACCACTTGGATGGAGCCTGAGTGCGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAGTATCCTGTCACTACAGAACTCCAGGCACGTTCCTCTCTCTCTCTCTCTCTCTCTCTACTACTCTTAATCGAAAAGCTTAGATCGATTCGTTGTTGTTCTATCGTTTCCCTCAATGACCATTATCCTCTGGAAATTCTGCAAATTGCAGCGTCGGTCATGGCGGAGTTCTGTTATTTAAAAAGGAGTTTAATTAGATATTGA

Coding sequence (CDS)

ATGGTTCTCTCCAAGACTGCCTCTCAGACCGACGTCTCCGTCCACTCCACCTTCGCTTCTCGCTATGTCCGCACCTCTCTCCCGAGATTCAAAATGCCGGAAAATTCGATTCCGAAGGAGGCCGCGTACCAGATCATCAACGACGAACTCATGCTCGATGGAAACCCTAGGCTCAACTTGGCCTCCTTTGTCACCACTTGGATGGAGCCTGAGTGCGATAAACTCATCATGGCCGCCATTAACAAGAATTACGTCGATATGGATGAGTATCCTGTCACTACAGAACTCCAGGCACGTTCCTCTCTCTCTCTCTCTCTCTCTCTACTACTCTTAATCGAAAAGCTTAGATCGATTCGTTGTTGTTCTATCGTTTCCCTCAATGACCATTATCCTCTGGAAATTCTGCAAATTGCAGCGTCGGTCATGGCGGAGTTCTGTTATTTAAAAAGGAGTTTAATTAGATATTGA

Protein sequence

MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQARSSLSLSLSLLLLIEKLRSIRCCSIVSLNDHYPLEILQIAASVMAEFCYLKRSLIRY

Homology

[Close]

BLAST of Moc04g30250 vs. NCBI nr
Match: XP_022141496.1 (glutamate decarboxylase [Momordica charantia])

HSP 1 Score: 198.0 bits (502), Expect = 6.1e-47
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. NCBI nr
Match: XP_038875203.1 (glutamate decarboxylase [Benincasa hispida])

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-46
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. NCBI nr
Match: GFS35273.1 (glutamate decarboxylase [Actinidia rufa])

HSP 1 Score: 195.7 bits (496), Expect = 3.0e-46
Identity = 96/98 (97.96%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
          MVLSKTAS++DVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQA 99
          ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQA
Sbjct: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQA 98

[Close]

BLAST of Moc04g30250 vs. NCBI nr
Match: PSS30077.1 (Glutamate decarboxylase [Actinidia chinensis var. chinensis])

HSP 1 Score: 195.3 bits (495), Expect = 3.9e-46
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKTAS++DVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTASESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. NCBI nr
Match: XP_008463152.1 (PREDICTED: glutamate decarboxylase 1 [Cucumis melo] >KAA0046279.1 glutamate decarboxylase 1 [Cucumis melo var. makuwa] >TYK18922.1 glutamate decarboxylase 1 [Cucumis melo var. makuwa])

HSP 1 Score: 195.3 bits (495), Expect = 3.9e-46
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIM+AINKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMSAINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. ExPASy Swiss-Prot
Match: Q07346 (Glutamate decarboxylase OS=Petunia hybrida OX=4102 GN=GAD PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.8e-47
Identity = 91/99 (91.92%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKT SQ+DVS+HSTFASRYVRTSLPRFKMP+NSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTVSQSDVSIHSTFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKL+M +INKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLMMDSINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. ExPASy Swiss-Prot
Match: Q42521 (Glutamate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=GAD1 PE=1 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-46
Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLS   S++DVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIM++INKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. ExPASy Swiss-Prot
Match: Q9ZPS3 (Glutamate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=GAD4 PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.1e-46
Identity = 89/99 (89.90%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKT S++DVS+HSTFASRYVR SLPRF+MPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTVSESDVSIHSTFASRYVRNSLPRFEMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKL+M +INKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLMMESINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. ExPASy Swiss-Prot
Match: Q9ZPS4 (Glutamate decarboxylase 3 OS=Arabidopsis thaliana OX=3702 GN=GAD3 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.4e-40
Identity = 79/99 (79.80%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKTAS++D S+HSTFASRYVR S+ RF++P+NSIPKEAAYQIINDEL  DGNPRLNL
Sbjct: 1   MVLSKTASKSDDSIHSTFASRYVRNSISRFEIPKNSIPKEAAYQIINDELKFDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKL+M +INKN V+MD+YPVTT+LQ R
Sbjct: 61  ASFVTTWMEPECDKLMMESINKNNVEMDQYPVTTDLQNR 99

[Close]

BLAST of Moc04g30250 vs. ExPASy Swiss-Prot
Match: Q9LSH2 (Glutamate decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=GAD5 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 4.9e-39
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVL+ T S +D  +HSTFASRYVR  +PRFKMP++ +PK+AAYQ+INDELMLDGNPRLNL
Sbjct: 1   MVLA-TNSDSDEHLHSTFASRYVRAVVPRFKMPDHCMPKDAAYQVINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIM ++NKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNR 98

[Close]

BLAST of Moc04g30250 vs. ExPASy TrEMBL
Match: A0A6J1CJC8 (Glutamate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111011866 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.9e-47
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. ExPASy TrEMBL
Match: A0A7J0DJ48 (Glutamate decarboxylase OS=Actinidia rufa OX=165716 GN=Acr_00g0038750 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.5e-46
Identity = 96/98 (97.96%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
          MVLSKTAS++DVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1  MVLSKTASESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQA 99
          ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQA
Sbjct: 61 ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQA 98

[Close]

BLAST of Moc04g30250 vs. ExPASy TrEMBL
Match: A0A5D3D5W1 (Glutamate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00020 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.9e-46
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIM+AINKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMSAINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. ExPASy TrEMBL
Match: A0A2R6RJ67 (Glutamate decarboxylase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc05343 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.9e-46
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKTAS++DVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTASESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. ExPASy TrEMBL
Match: A0A1S3CIY3 (Glutamate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103501361 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.9e-46
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAA+QIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAFQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIM+AINKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMSAINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. TAIR 10
Match: AT5G17330.1 (glutamate decarboxylase )

HSP 1 Score: 187.2 bits (474), Expect = 1.0e-47
Identity = 91/99 (91.92%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLS   S++DVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIM++INKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. TAIR 10
Match: AT2G02010.1 (glutamate decarboxylase 4 )

HSP 1 Score: 185.7 bits (470), Expect = 2.9e-47
Identity = 89/99 (89.90%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKT S++DVS+HSTFASRYVR SLPRF+MPENSIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTVSESDVSIHSTFASRYVRNSLPRFEMPENSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKL+M +INKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLMMESINKNYVDMDEYPVTTELQNR 99

[Close]

BLAST of Moc04g30250 vs. TAIR 10
Match: AT2G02000.1 (glutamate decarboxylase 3 )

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-41
Identity = 79/99 (79.80%), Postives = 91/99 (91.92%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVLSKTAS++D S+HSTFASRYVR S+ RF++P+NSIPKEAAYQIINDEL  DGNPRLNL
Sbjct: 1   MVLSKTASKSDDSIHSTFASRYVRNSISRFEIPKNSIPKEAAYQIINDELKFDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKL+M +INKN V+MD+YPVTT+LQ R
Sbjct: 61  ASFVTTWMEPECDKLMMESINKNNVEMDQYPVTTDLQNR 99

[Close]

BLAST of Moc04g30250 vs. TAIR 10
Match: AT3G17760.1 (glutamate decarboxylase 5 )

HSP 1 Score: 162.2 bits (409), Expect = 3.4e-40
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVL+ T S +D  +HSTFASRYVR  +PRFKMP++ +PK+AAYQ+INDELMLDGNPRLNL
Sbjct: 1   MVLA-TNSDSDEHLHSTFASRYVRAVVPRFKMPDHCMPKDAAYQVINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIM ++NKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNR 98

[Close]

BLAST of Moc04g30250 vs. TAIR 10
Match: AT3G17760.2 (glutamate decarboxylase 5 )

HSP 1 Score: 162.2 bits (409), Expect = 3.4e-40
Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1   MVLSKTASQTDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNL 60
           MVL+ T S +D  +HSTFASRYVR  +PRFKMP++ +PK+AAYQ+INDELMLDGNPRLNL
Sbjct: 1   MVLA-TNSDSDEHLHSTFASRYVRAVVPRFKMPDHCMPKDAAYQVINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMAAINKNYVDMDEYPVTTELQAR 100
           ASFVTTWMEPECDKLIM ++NKNYVDMDEYPVTTELQ R
Sbjct: 61  ASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNR 98

The following BLAST results are available for this feature:

BLAST of Moc04g30250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141496.1	6.1e-47	98.99	glutamate decarboxylase [Momordica charantia]	[more]
XP_038875203.1	1.8e-46	97.98	glutamate decarboxylase [Benincasa hispida]	[more]
GFS35273.1	3.0e-46	97.96	glutamate decarboxylase [Actinidia rufa]	[more]
PSS30077.1	3.9e-46	96.97	Glutamate decarboxylase [Actinidia chinensis var. chinensis]	[more]
XP_008463152.1	3.9e-46	96.97	PREDICTED: glutamate decarboxylase 1 [Cucumis melo] >KAA0046279.1 glutamate deca...	[more]

BLAST of Moc04g30250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q07346	4.8e-47	91.92	Glutamate decarboxylase OS=Petunia hybrida OX=4102 GN=GAD PE=1 SV=1	[more]
Q42521	1.4e-46	91.92	Glutamate decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=GAD1 PE=1 SV=2	[more]
Q9ZPS3	4.1e-46	89.90	Glutamate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=GAD4 PE=1 SV=1	[more]
Q9ZPS4	3.4e-40	79.80	Glutamate decarboxylase 3 OS=Arabidopsis thaliana OX=3702 GN=GAD3 PE=2 SV=1	[more]
Q9LSH2	4.9e-39	78.79	Glutamate decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=GAD5 PE=2 SV=1	[more]

BLAST of Moc04g30250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJC8	2.9e-47	98.99	Glutamate decarboxylase OS=Momordica charantia OX=3673 GN=LOC111011866 PE=3 SV=1	[more]
A0A7J0DJ48	1.5e-46	97.96	Glutamate decarboxylase OS=Actinidia rufa OX=165716 GN=Acr_00g0038750 PE=3 SV=1	[more]
A0A5D3D5W1	1.9e-46	96.97	Glutamate decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2R6RJ67	1.9e-46	96.97	Glutamate decarboxylase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY0...	[more]
A0A1S3CIY3	1.9e-46	96.97	Glutamate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103501361 PE=3 SV=1	[more]

BLAST of Moc04g30250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17330.1	1.0e-47	91.92	glutamate decarboxylase	[more]
AT2G02010.1	2.9e-47	89.90	glutamate decarboxylase 4	[more]
AT2G02000.1	2.4e-41	79.80	glutamate decarboxylase 3	[more]
AT3G17760.1	3.4e-40	78.79	glutamate decarboxylase 5	[more]
AT3G17760.2	3.4e-40	78.79	glutamate decarboxylase 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002129	Pyridoxal phosphate-dependent decarboxylase	PFAM	PF00282	Pyridoxal_deC	coord: 33..99 e-value: 8.9E-12 score: 44.4
None	No IPR available	GENE3D	4.10.280.50		coord: 1..65 e-value: 3.1E-32 score: 112.3
None	No IPR available	PANTHER	PTHR43321:SF26	GLUTAMATE DECARBOXYLASE	coord: 1..100
IPR010107	Glutamate decarboxylase	PANTHER	PTHR43321	GLUTAMATE DECARBOXYLASE	coord: 1..100
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 15..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g30250.1	Moc04g30250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006538	glutamate catabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0006536	glutamate metabolic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0004351	glutamate decarboxylase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0016830	carbon-carbon lyase activity