Moc04g30130 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g30130
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr4: 22488021 .. 22488552 (+)
RNA-Seq ExpressionMoc04g30130
SyntenyMoc04g30130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAAAAGGAAAGAGAGTGTAGCGACGACCAGCGGTCTTCTTCTTCTTCGTCCACTGCAGTCTGCAACTCAGAAATTGGCTATAAATTCGGCCTTATCGGCGACCTCCGAGCTCACAACAATGGCTTCTCTCAGGATTTCATTCGTCTTGAAGCTCTTCTTCTTCGCATTGCTTCTCATCGCCTCTAGGGTTTCTGCGAGTACTCCTTCCATTCACAAACGCCCTCGCATTCGTAAGTTCATCTAAATGCTTTTCTTTCTTTTTTTTTTTTTTAAGTCTGTGGTACAAAACCATGTTTTTTTAACGTAGATCAGATAAAAAGTATCGACGTGTTTGACATATATTTAATATCATAAAATTTGTATTTCTTTATTAATTTATTAACTTTGATTTTGACTTTTGGTGATGTTTACAAGGTAAACTGGGTATGGAGTATAGAAGTGTTGGGAAGGCTGTGTTGAGAGCAAAGGCAGCAAGTTATGATTTCCCATGGAAGGGTGGTTACAACCCTCCAAACAACAACCCTTGA

mRNA sequence

ATGGACAAAAGGAAAGAGAGTGTAGCGACGACCAGCGGTCTTCTTCTTCTTCGTCCACTGCAGTCTGCAACTCAGAAATTGGCTATAAATTCGGCCTTATCGGCGACCTCCGAGCTCACAACAATGGCTTCTCTCAGGATTTCATTCGTCTTGAAGCTCTTCTTCTTCGCATTGCTTCTCATCGCCTCTAGGGTTTCTGCGAGTACTCCTTCCATTCACAAACGCCCTCGCATTCGTAAACTGGGTATGGAGTATAGAAGTGTTGGGAAGGCTGTGTTGAGAGCAAAGGCAGCAAGTTATGATTTCCCATGGAAGGGTGGTTACAACCCTCCAAACAACAACCCTTGA

Coding sequence (CDS)

ATGGACAAAAGGAAAGAGAGTGTAGCGACGACCAGCGGTCTTCTTCTTCTTCGTCCACTGCAGTCTGCAACTCAGAAATTGGCTATAAATTCGGCCTTATCGGCGACCTCCGAGCTCACAACAATGGCTTCTCTCAGGATTTCATTCGTCTTGAAGCTCTTCTTCTTCGCATTGCTTCTCATCGCCTCTAGGGTTTCTGCGAGTACTCCTTCCATTCACAAACGCCCTCGCATTCGTAAACTGGGTATGGAGTATAGAAGTGTTGGGAAGGCTGTGTTGAGAGCAAAGGCAGCAAGTTATGATTTCCCATGGAAGGGTGGTTACAACCCTCCAAACAACAACCCTTGA

Protein sequence

MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP
Homology
[Close]
BLAST of Moc04g30130 vs. NCBI nr
Match: XP_022141390.1 (uncharacterized protein LOC111011803 [Momordica charantia])

HSP 1 Score: 214.2 bits (544), Expect = 6.1e-52
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL 60
           MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL
Sbjct: 1   MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL 60

Query: 61  IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP 116
           IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP
Sbjct: 61  IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP 115

[Close]
BLAST of Moc04g30130 vs. NCBI nr
Match: KAG6602002.1 (hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 74.7 bits (182), Expect = 5.8e-10
Identity = 44/74 (59.46%), Postives = 52/74 (70.27%), Query Frame = 0 

Query: 42  MASLRISFVLKLFFFALLLIASRVSASTPSI-HKRPRIRKLGMEYRSVGKAVLRAKAASY 101
           M S +IS  L  FF ALLL+A  VSA+  S   ++P IRKL MEY +V KA LRAK A Y
Sbjct: 1   MGSHKISMALP-FFLALLLVAFTVSAADISASFQKPHIRKLSMEYTTVEKAALRAKPAVY 60

Query: 102 DFPWKGGYNPPNNN 115
           DFPWKGGY+PP N+
Sbjct: 61  DFPWKGGYHPPAND 73

[Close]
BLAST of Moc04g30130 vs. NCBI nr
Match: TYK18975.1 (hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 7.5e-10
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0 

Query: 42  MASLRISFVL-KLFFFALLLIASRVSASTPSIHKRPRIR-KLGMEYRSVGKAVLRAKAAS 101
           MAS+ I +++ KL FF LLLI +  +A  P +H+ PR R K+ MEYRSV K  L AK A 
Sbjct: 1   MASINIIWIIFKLLFFTLLLITTS-TAFQPQLHE-PRFRKKMRMEYRSVRKGALGAKPAV 60

Query: 102 YDFPWKGGYNPPNNN 115
           YDFPWKGGYNPP+NN
Sbjct: 61  YDFPWKGGYNPPDNN 73

[Close]
BLAST of Moc04g30130 vs. NCBI nr
Match: KGN53822.1 (hypothetical protein Csa_015192 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09
Identity = 42/75 (56.00%), Postives = 50/75 (66.67%), Query Frame = 0 

Query: 42  MASLR--ISFVLKLFFFALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAAS 101
           MAS+   I  + KL FF LLLI +  SA  P +H+    +K+ MEYRSV KA L  K A 
Sbjct: 1   MASINNIILIIFKLLFFTLLLITTS-SAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAV 60

Query: 102 YDFPWKGGYNPPNNN 115
           YDFPWKGGYNPP+NN
Sbjct: 61  YDFPWKGGYNPPHNN 74

[Close]
BLAST of Moc04g30130 vs. NCBI nr
Match: KAG6600177.1 (hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 61.6 bits (148), Expect = 5.1e-06
Identity = 44/75 (58.67%), Postives = 51/75 (68.00%), Query Frame = 0 

Query: 42  MASLR-ISFVLKLFF-FALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAA- 101
           M SL+ ISFVLKL   FALLLIAS +SA    +   PRIRK+GMEY+ VGKAV+ AK   
Sbjct: 1   MVSLKMISFVLKLLVCFALLLIASPISA----MDNTPRIRKMGMEYKLVGKAVVVAKPVR 60

Query: 102 --SYDFPWKGGYNPP 112
             S D PW GGY+ P
Sbjct: 61  QLSADSPWGGGYHIP 71

[Close]
BLAST of Moc04g30130 vs. ExPASy TrEMBL
Match: A0A6J1CHY3 (uncharacterized protein LOC111011803 OS=Momordica charantia OX=3673 GN=LOC111011803 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.9e-52
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL 60
           MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL
Sbjct: 1   MDKRKESVATTSGLLLLRPLQSATQKLAINSALSATSELTTMASLRISFVLKLFFFALLL 60

Query: 61  IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP 116
           IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP
Sbjct: 61  IASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAASYDFPWKGGYNPPNNNP 115

[Close]
BLAST of Moc04g30130 vs. ExPASy TrEMBL
Match: A0A5D3D619 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00680 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10
Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0 

Query: 42  MASLRISFVL-KLFFFALLLIASRVSASTPSIHKRPRIR-KLGMEYRSVGKAVLRAKAAS 101
           MAS+ I +++ KL FF LLLI +  +A  P +H+ PR R K+ MEYRSV K  L AK A 
Sbjct: 1   MASINIIWIIFKLLFFTLLLITTS-TAFQPQLHE-PRFRKKMRMEYRSVRKGALGAKPAV 60

Query: 102 YDFPWKGGYNPPNNN 115
           YDFPWKGGYNPP+NN
Sbjct: 61  YDFPWKGGYNPPDNN 73

[Close]
BLAST of Moc04g30130 vs. ExPASy TrEMBL
Match: A0A0A0KZM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152270 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 6.2e-10
Identity = 42/75 (56.00%), Postives = 50/75 (66.67%), Query Frame = 0 

Query: 42  MASLR--ISFVLKLFFFALLLIASRVSASTPSIHKRPRIRKLGMEYRSVGKAVLRAKAAS 101
           MAS+   I  + KL FF LLLI +  SA  P +H+    +K+ MEYRSV KA L  K A 
Sbjct: 1   MASINNIILIIFKLLFFTLLLITTS-SAFQPQLHEPHFRKKMRMEYRSVRKAALGGKPAV 60

Query: 102 YDFPWKGGYNPPNNN 115
           YDFPWKGGYNPP+NN
Sbjct: 61  YDFPWKGGYNPPHNN 74

The following BLAST results are available for this feature:
BLAST of Moc04g30130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022141390.16.1e-52100.00uncharacterized protein LOC111011803 [Momordica charantia][more]
KAG6602002.15.8e-1059.46hypothetical protein SDJN03_07235, partial [Cucurbita argyrosperma subsp. sorori... [more]
TYK18975.17.5e-1058.67hypothetical protein E5676_scaffold418G00680 [Cucumis melo var. makuwa][more]
KGN53822.11.3e-0956.00hypothetical protein Csa_015192 [Cucumis sativus][more]
KAG6600177.15.1e-0658.67hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Moc04g30130 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc04g30130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CHY32.9e-52100.00uncharacterized protein LOC111011803 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A5D3D6193.6e-1058.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KZM06.2e-1056.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G152270 PE=4 SV=1[more]
BLAST of Moc04g30130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g30130.1Moc04g30130.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane