Moc04g29490 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g29490
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Location	chr4: 21885120 .. 21892781 (-)
RNA-Seq Expression	Moc04g29490
Synteny	Moc04g29490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCGAAGAAACATTCGGCTGAGGAGGGAGTATTTGTACAGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTTTATGAGAAGAAGCGGAAGATTAGAGAAGCCCTTGAAGGTAACCCATATTGCTCGGTAAAAGGAGAGTACGAAGTAGGAGGATTAAATAACCCTTACTAGTCAAAAGAGTCACATAGACTTTCTAATTGATTTCTATATTGAACATATAATAGTTACAGAAACTATTAGGAGAACACCATCGTGGTACCCAAAATAATGGTTGTATTAAAAGTATTATGAGGAGTTTGAAAATTTGTGGTTGAAGGTTGGTCTATTTCTTCCCAACCACACTCTAAGCTCCTAAATTGGGAATGGTTAACTTTTAGCTCCTTGTTGATTTTTTTTTTCCTGTAGAGGGAAAACCTATTCCTACTGAGCTTCGGAATGAGGAGGCAGCGCTTCGTAAAGAAATTGAACTCGAGGATGATAATACAGCAGGTACTAGTTTATGACTACTCTTCAATTAAATGGGAAAATGACCACTTATTTCTGTTCTCGATCCTTCCTAACGAATTCAACGAAGCCAATGACTTACTTTTTGGGTCTTGAATGTGTCCTTAGGCAACATCAATGGTCTAAGATTCCCTGTTTCCTCTCTGTCTCTTTCAATTCTTTCATATTTCTTGGTGAAAAAATGGAGTTTAAACTTAAGAATTTTCATGGAGTATATTAGTTATAGTGTGCGGAAGAGATCTTTCTTCATTAGTTTAGCTGGTAAGTTGTGGAGTTTTTTTTTAAATAATTAAATTAGAAGGAAAGATAAAATCTCATTATTTATACGTCAAATTTCTATGTGATTAAATTCTTTGGTTGAAAACAAACATTGGTGGAAGTGTAATGACTTCAGTGTATGTTGAATCCAAAGTTCTTAAAAAAAAGGAAAAGGTTTGATGAAGTAATATTTTGGGTGCAAAAAATCTCAAATAATAATGGGTGGTTTATGGAATCGCTGGTATTTAATATGAAGGAGTCAAGAAATGTATTACAGTTCCAGTAGGGGTGAACAAGGGTGGATGGAGTTGGAAGATGTAGAGATGTTGGAAGATTTTAAGAGGAAGATGAGTGGAGGGAAGGTCGACGGAGAATTTAGTCAAAGAAATTCTAGTTGCTATGGGGGAAAAAGAGAAAGTGGAGAACACTTTGTGCAAGTAGTGAAAGAAAATTTGAGAGAAAATGTAGTGGAAGAGGGAAAAATCAATTGGGAGGAGGAGGATAAATATTTGGGTGAGGAACAGCAGGGGGAATAAAGTTTTAAGGGGAATAGTGAGGAGTTTTTAAAGGAAAAAGAAATGGATTGTTAAGAAGAAAATGGAGTGTGCTCAAATTGATTGGGAGCATACATTAATTGTAATGAGATTTTAATTCCATGATTATTGGTACACCATTGTGGAAGTGAAGATAATTTTCAGCAGGCTGGCAAGCTAATGGGGCAGCAGAATCCAATTATGGTCATGAAAAAGTCACATGGTGCCAAATAATTTCTGGTTAACATAGTTGGTGCATCACGTAAGCATTAAATCGGCAGAGTTAACGGCGAAGATGTACTAGACACAATTGAAAGCGTAGGGACTAACAGACACAACCTTTGAAGTTCAAGGACCAAATTTATAATTTGACATTTATTTTAACATGATGTTTTGTTTCTTATAGTAGAGGTGAAGGGGAAATATCAAAGTAATAGAAGGCAGGGAGAGTTTTTGCAATTTTTTAAAATTGAATTATTTGAATTTTTATTTAAAAGATCATTGCACTTTCTTATGTTCGCATTCTTAAAAGAATTCCTGAATCTTAATGACAAATTGTACGTGCTAGTTGGTTTCAAGTAATTTTTGCTAATATTTGATTGCTTTTTGGTGTGCATCAAATTCAGTCCCGAGGACCCACATTGATGATGAGTATGCAAATACTTCCGAAGTTGATCCAAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGTTGGTATAATCTTTCTTTCTTTCTTTCATATTTTTAGACTTTTTTTAGACTTTATTCTCTCCTTCATAATTTATGTGGTTGATAGATGCAAAAGGATAGCTCTTGGCCTTAACTGAAGTTTTACTGGCAATCTAAACACAGGAATTAAAAATTGTGTTTCCCAATGCTCAACGAATGAATCGTGGTGGTCAGGTTAGTGTTCATTTTGCCTACCTTCTTGGTTTCTCTATTATTTATCCATTTCTACATTTAGCCTTTAAGTTGGAAGTTATTATTCTTTGCAGTCAAATACCATAAGGGGCCTTTTGTGACTTGAGCCTTTCTTGACATAGGCATACTTAATTATATTATTTGATAGATAGTTGATACTTAATTACACTATTTATGGATGGCTTTAAATTAGTAGCATGTTACAGATACTTCTAAATTTTCTCATAACAAGAACCTTGGGTGGTTCATGTAGTCAAAGGAGCAAGTGGTTGATCCAACGGCTTCAAGGTTATGGGTTCTAAGTTTTTTGATAGTCAGATAGCTAGGCCGTTAACAACTCATGGGCTTTTTAATGCTAGATGTTGGAAATGTGAAAAATGTTTCATGAGATAAGCTAAGATGTCTGTAAGTTGTAAGTTGGTCTAGCCACTTTTAGTTGTGAAATGTTTCTAATACTATAGTTTCGGGAGCAAGAAAATGATTGAAACTATAGTATTATATAACTTGCAAAATAAGAAAATGTAGAAGAATAACCCTTTTCTCTCCAAATCTTGAGTACAGCAATTGTTAAAGTTCTCCTTTTGAAAGAACTCATCAAATTTTTACCTGTGACAAAGAAAATTGAATGTATGATGTGTTTTTGGTTAAGTGGTGGTGGTAGTATTCTTATATCCTCCTCATTTGTAGGGCCTTTTGTTTGATGAAAATGTTCTATTATTTTTCAGGTTATCTCAGAGATTATAGAGACCTGTCGTGCTCACGAGTTCACTGACGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTGTCAGCCATTTACCTTTTGGTCCAACTGCATATTTCGGATTGTTGAATGTGGTAAGTGTTATTTTGGAATTCAGTTTTTTACTAATGGTTTTTTGCTCCAGGCGGGGCTTGTAGGCTCATCTTTTGTATCCAATTCAGGTGACGAGACATGAAATTAAGGACAAAAAGGCTATGGGAACAATGCCTGAGGCCTATCCGCACATAATTTTGAACAATTTTACCACAAAGGTACCACACATGTTTTGAATGATACCATCATCTGCTTGTCATTTTACATATTTCATGAAATGTATATATTCCTTTCAACCACGCGTCCTTTAGCTTAACATTTGTATTGCATTAGCAATTGTTACATAATGTTAAAATGCTGAATTTGTATTTCTAGAGAAGAAAACAATGAAAGAGGTTGAAGGTGAAAACGAAAACTTTCTGATGTACATTATTATTAGCTATTTTTTAAATCTCTAAGTTATTTGATTTCAAAAGTAATTAGTCTACTATTCAGTCAGGATTTTCCTGTTTTTGACATGCTGGTACCAGTATATCTTATCATCATTTTATATTTTCTCCCTGTTGTTCCCATAAGACTCCATTTTTTCTCTTTCTATTTGCCACCATATTCCATGTTGGCATGTGTGTTTGTGTGGTTGCATGTTGAGGACGTCTATGTCTATACGTTTTTCCTTATGCTTATTGCTCATTATATTTTGATAATGTGTTCTTCAGTGTCTTTTCTAATTTGTATCTTTTATTATATTTTTCTGCACCTTTTACTATACATTGTCCAATTTTTTTTGTAGTTGGGTGAAAGGACAGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACTAAACGTGTGATTACTTTTGCCAATCAGTCTGATTATATTTCATTCAGGTTGGTTCACTAATGAATTTTCGACCCGGTTGACATTGTTTTCTTTCTTGATTGTTTCATAAGTAGTCAACGTTCATGTTAGAGGCAGATTTTATTGGTGAAATATGGACCTCAAGTATTTATTGGTAAGATGGTAAAGAATTAAGGTTGGTGGATGCTTAAGGAATTTTGTATTATCCACCAACCTACTGACTAAATGGAAAATTGGGAGTATATCTGTTGTTTTTATATCAATTTCAGGATGCAAGAACCTTGGATTTAAATAGTCAGATGATAAAATTTGTGGTAGATTAGTAAGTTCTAAATATAAAAATGTATGCGCTTTTGACTAGCTAGAACTTCTTTATTCCTCGGTGGTTAATTACTTTTGCATTCAAGTATGGCTTTTGTTATTTCTCTTTCTCTGATTATATACGGATTATGAATCTGTGCTCAAAGATACTAGAGATCAACTCCCTATTACTCTTATTGGTAGAGAAGTTAAACAACAAAAAGGGTTCTTGACAGAGATGAAAGAACTTGACAACAATGGTAGGAAGAAGAGACTCATGCTCCCGTTTGCGAATCACAAGATAGCCTGGAATGCTTTTCTCTCCCTGATCAGTGAAACAAGAAAAGAGAGTGATAGAGACAAAAAGGGAGACCTCTGCTCCCCTCCCTCTCCCCCCTCTCATAAAGATTATATTCTGAAAGGAGAATCCCCCGCTAATGAGAGCTTTAAATACGGAATGGTTAACCCACCAAACAACCCATTCTATATTGACAAGATTTGGAGAGACAAATACCTTAAAATGGTTAAGTTCTTTTGTTGGGAGCTCAGCCACACCACAGTGCAATCAACACACAAGATTTGGTCCAAAAGAAGCACCCCCACATTGCTCTCTCTCCAAGCTGCTGTTTTTTCTGTTTTAAAGAAGCACCTGCACACCTATTGTTTGATACTATGGGAGCTGGCCATGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGTAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTTTCAGGGAGAGCTAACGCTTGTTGAGTATTTTGGTTTGACACTGCTTCACACCCAAAAAGAAGCGAGCTACGTCTGAGTTAAACTTGGAGATGAAAGTGTTCTCTTAGTTATCTCTTGGTCTAAATGCTCCCCCCTCTTTCATCACTACTATAGTTTTGCCTCCCTTCTATCTAACTGGAGAGCCTTTTTGTAGCCCACTCATGGGTTCCTCCCTTTTGTATTCATATTTCATATTATCAATGAAATAGTTTCTTTTCAAGAAAAAAAAAAAAGGCTGAGACATGGGCATATTTTCATTTCTTGTGATTTTGCTGCTGGATTTTGGAACAAGGCTCTATTGTCCTTTGGTTGGCAAACCCCCTCCACAAAAATCCAAAGGCAATCCTTCAACTGCTTCTGGTGAGCCATCATTTTAAAAAGAATGGAGGAATTATATGGGTGAATTTGGTCAGGGTCTTCCTTTGGAGCTTATGGTTATAAAGAAACAAGAGGATATTCAACGACACCCACCTTCCTTTTAACTTATTTTTTGACAGATTTTTTACTCCCCATTTATTAATTATAGTCTTAATGACTTGATAAATTGTTAGGCCTTTTCGTAATCCAATTTTAAGGGACCCTTTTGTATATTTCATACCATCAATGAAATATCAGTTTCTTATATATTAAAAAAAAATCGAGATCATCATTGCTTTTCATTGCAACGCTTAGTGGAAGAATAAGATTAGTGGTAATGTGCCTAAGGTTATTCAAGAAAATTTAGCAAACGCATGAACACAAATAGAAAAAGTTTCAATTTCTCTCTCTGTACAGTTAATTTTTCATTTAGAACTGTCTTTAAATGGCCTCGTGAATGAAAGTGTTCATTCATTTTTAAAAGTTGTGTTTCCTCCGTAGTAAGTAGCTCTTTGCTAATTTTTGCTTGTTTTCTTTGATGATTTGGATTTTAAAACTGTAGGCATCATATTTATGAGAAGCAAGGGGGTGTTAAATCAATTGAGCTGAAGGAGATCGGTCCTCGGTTTGAATTGCGATTGTATCAGGTACCTATTCTGTGATTCAGTTCATTGCTTTGTCCATAACATGCATTTCAGTTGGGCTTTCACAATATTGGAGAAAGCATTTTAGTAAACAAATATTAACGAGCACTCAATGGGTTCAAACGTTTTACTTGTAAGTATTTGATAAACAAACAAATTAACTAAGCAACCATGATCTATGTTTATAAGGTCAAAAAGACTTTGTTTATAATATTTTCTATCATCCTTTTGTGTTTTGTTGGACTATGCGATTTCGTTCAATTTCTCTGACACTAAAATTTCATTTGATAATGATTTTGTTTTTTGTTTTTCGTTTTCAAAAATCATGTTTGCTTCCTCACAATTGCTTTGGTATGCTACACATTTCTTTAAAAAATATTTGAATTCGTAGCTAAATTTTAAAAACAAAAATAAAATTTTAGAACTTAGATAATTTTTTTCTTTAGTTTTTAAAATTTGACTCAGATTTTGAAAATGTTTTTATAGAGTATATATCAAAGTAAGGAAATACATGAGTAGAAGTATGGTAGAATCCAAATGGCTAAAATAGATTGAAAGATAAAAAGATAGGACTACAATTATCTCCAAGTAATTTGACTGGACCCCCTCCCCTGTTGAGATTACTCAAGTCTAAACTAAACTGACCACCTTCATCCCTTTCCCGCAGTCTATTTATAACAAATCCCTTCTAACCAATTTCGTAACTAATTACTAACATACCCTTACTAGTCTACTAATATCCCTAATTACCCAAAAAATTCCTATCAAAGTAGTTTTTATAAACTTGATTTTCAAAAACAGAAAATCTAAAATGAAATGGTTATAAGCTCTTTTTTGTTTGCAGTTGTTCATACTTGATTTTGATTTTAAGTCTGGCAGGCTTTTCTGGTTTCTCATGCAGTACTAGACATCACCTGCAATTTTATCAAAGATTAAAAATAAATTGGTTACATCTCAACATTATCCTAGTACTATTAGTAATCTCAATTTTCATGTTGATGTTACAGTGAATTTTTTTTCGTATCATCTATAATATCAGAATTTTATGACATGATGAAGTCTATTATTAAAAAATAATCCAAACTATTTTGCTCTGGCCAATAAGATGGTTGTGTAATATAGATGTCTTCAGATTCTGACATTGTTAAATTTTCTCAGCATTCATAGAATATGGTTGTGTAATATGAAGATTGTTGCTCTAGCTTAATGCTTTTATTTTTGTTCACAAGATATAGGTTGTTCTGTGGATTAATTCTGAAATATCTGGATCTGATCATATTTTATTAAACTTTTATTTTTTCTTCATTCGTTTTTCGTCTTTTGATCCGTATCACCAGTCCTGCCTTGCCCGTGCTCATACGATTAGAACGAAACTTGCAGTTTTGTTGTGTCGGAGTATTGTTTCTCGGCTGGTAAGCCAATAATTATTTCAATGTGTATCTTAATTTCCCTTTCTGGTTTTCTTGGATGGTGGTTGCAGATCAAGTTAGGAACTGTTGATCAAACGGAAGCTCAGAATGAATGGGTGATTAGGCCATACATGAAAACAACCAAGAAACGCAAGTTTCTTGGTGATTGA

mRNA sequence

ATGTTGCGAAGAAACATTCGGCTGAGGAGGGAGTATTTGTACAGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTTTATGAGAAGAAGCGGAAGATTAGAGAAGCCCTTGAAGAGGGAAAACCTATTCCTACTGAGCTTCGGAATGAGGAGGCAGCGCTTCGTAAAGAAATTGAACTCGAGGATGATAATACAGCAGTCCCGAGGACCCACATTGATGATGAGTATGCAAATACTTCCGAAGTTGATCCAAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTAAAAATTGTGTTTCCCAATGCTCAACGAATGAATCGTGGTGGTCAGGTTATCTCAGAGATTATAGAGACCTGTCGTGCTCACGAGTTCACTGACGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTGTCAGCCATTTACCTTTTGGTCCAACTGCATATTTCGGATTGTTGAATGTGGTGACGAGACATGAAATTAAGGACAAAAAGGCTATGGGAACAATGCCTGAGGCCTATCCGCACATAATTTTGAACAATTTTACCACAAAGTTGGGTGAAAGGACAGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACTAAACGTGTGATTACTTTTGCCAATCAGTCTGATTATATTTCATTCAGGCATCATATTTATGAGAAGCAAGGGGGTGTTAAATCAATTGAGCTGAAGGAGATCGGTCCTCGGTTTGAATTGCGATTGTATCAGATCAAGTTAGGAACTGTTGATCAAACGGAAGCTCAGAATGAATGGGTGATTAGGCCATACATGAAAACAACCAAGAAACGCAAGTTTCTTGGTGATTGA

Coding sequence (CDS)

ATGTTGCGAAGAAACATTCGGCTGAGGAGGGAGTATTTGTACAGAAAGAGTTTAGAAGGCAAGGAGCGTTTGCTTTATGAGAAGAAGCGGAAGATTAGAGAAGCCCTTGAAGAGGGAAAACCTATTCCTACTGAGCTTCGGAATGAGGAGGCAGCGCTTCGTAAAGAAATTGAACTCGAGGATGATAATACAGCAGTCCCGAGGACCCACATTGATGATGAGTATGCAAATACTTCCGAAGTTGATCCAAAAATTTTGATAACTACATCTCGGGATCCAAGTGCACCTTTGACACAGTTTGCAAAGGAATTAAAAATTGTGTTTCCCAATGCTCAACGAATGAATCGTGGTGGTCAGGTTATCTCAGAGATTATAGAGACCTGTCGTGCTCACGAGTTCACTGACGTTATTTTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTGTCAGCCATTTACCTTTTGGTCCAACTGCATATTTCGGATTGTTGAATGTGGTGACGAGACATGAAATTAAGGACAAAAAGGCTATGGGAACAATGCCTGAGGCCTATCCGCACATAATTTTGAACAATTTTACCACAAAGTTGGGTGAAAGGACAGCCAACATCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACTAAACGTGTGATTACTTTTGCCAATCAGTCTGATTATATTTCATTCAGGCATCATATTTATGAGAAGCAAGGGGGTGTTAAATCAATTGAGCTGAAGGAGATCGGTCCTCGGTTTGAATTGCGATTGTATCAGATCAAGTTAGGAACTGTTGATCAAACGGAAGCTCAGAATGAATGGGTGATTAGGCCATACATGAAAACAACCAAGAAACGCAAGTTTCTTGGTGATTGA

Protein sequence

MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELEDDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQGGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD

Homology

[Close]

BLAST of Moc04g29490 vs. NCBI nr
Match: XP_022157893.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia] >XP_022157894.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia])

HSP 1 Score: 586.3 bits (1510), Expect = 1.5e-163
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 294
           GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Sbjct: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 293

[Close]

BLAST of Moc04g29490 vs. NCBI nr
Match: XP_022993779.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima])

HSP 1 Score: 572.4 bits (1474), Expect = 2.2e-159
Identity = 282/293 (96.25%), Postives = 289/293 (98.63%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DD TAVPRTHIDDEYAN S++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           I+EIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMG
Sbjct: 121 IAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEKQ
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKQ 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 294
           GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD 293

[Close]

BLAST of Moc04g29490 vs. NCBI nr
Match: KAG6579112.1 (U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 570.5 bits (1469), Expect = 8.5e-159
Identity = 281/293 (95.90%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELE
Sbjct: 86  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 145

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DD TAVPRTHIDDEYAN S++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 146 DDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 205

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           I+EIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMG
Sbjct: 206 IAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMG 265

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK 
Sbjct: 266 TMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 325

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 294
           GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Sbjct: 326 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD 378

[Close]

BLAST of Moc04g29490 vs. NCBI nr
Match: KAG7016636.1 (U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 570.5 bits (1469), Expect = 8.5e-159
Identity = 281/293 (95.90%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELE
Sbjct: 59  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 118

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DD TAVPRTHIDDEYAN S++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 119 DDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 178

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           I+EIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMG
Sbjct: 179 IAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMG 238

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK 
Sbjct: 239 TMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 298

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 294
           GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Sbjct: 299 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD 351

[Close]

BLAST of Moc04g29490 vs. NCBI nr
Match: XP_022939256.1 (U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata] >XP_022939257.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata] >XP_023549778.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita pepo subsp. pepo] >XP_023549779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita pepo subsp. pepo] >XP_023549780.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570.5 bits (1469), Expect = 8.5e-159
Identity = 281/293 (95.90%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DD TAVPRTHIDDEYAN S++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           I+EIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMG
Sbjct: 121 IAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK 
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 294
           GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD 293

[Close]

BLAST of Moc04g29490 vs. ExPASy Swiss-Prot
Match: Q0VD01 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Bos taurus OX=9913 GN=IMP4 PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 5.7e-89
Identity = 167/292 (57.19%), Postives = 212/292 (72.60%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRR  RLRREYLYRK+ E  ER   E+K K+R ALEE + IPTELR E  AL+  +E +
Sbjct: 1   MLRREARLRREYLYRKAREEAERTAQERKDKVRRALEENRLIPTELRREALALQGSLEFD 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D        H+DDEY      DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   
Sbjct: 61  DAGGEGVTNHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           +  ++  C+A+  TD+++VHEHRG P GLIVSHLPFGPTAYF L NVV RH+I D   +G
Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           T  EA PH+I++ F+++LG+R ++IL++LFPVPK D++RVITFANQ DYISFRHH+Y+K 
Sbjct: 181 TASEAKPHLIMHGFSSRLGKRVSDILRYLFPVPKDDSRRVITFANQDDYISFRHHVYKKT 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL 292
              +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T  KR FL
Sbjct: 241 NH-RNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTAHKRVFL 288

[Close]

BLAST of Moc04g29490 vs. ExPASy Swiss-Prot
Match: Q8VHZ7 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus musculus OX=10090 GN=Imp4 PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 7.4e-89
Identity = 166/292 (56.85%), Postives = 214/292 (73.29%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE + IPTELR E  AL+  +E +
Sbjct: 1   MLRREARLRREYLYRKAREEAQRSVQEKKERVKRALEENQLIPTELRREALALQGSLEFD 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D       +H+DDEY      DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   
Sbjct: 61  DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           +  ++  C+A+  TD+++VHEHRG P GLIVSHLPFGPTAYF L NVV RH+I D   +G
Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TM EA PH+I + F+++LG+R ++IL++LFPVPK D+ RVITFANQ DYISFRHH+Y+K 
Sbjct: 181 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKKT 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL 292
              +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 241 DH-RNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of Moc04g29490 vs. ExPASy Swiss-Prot
Match: Q5PQR5 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Rattus norvegicus OX=10116 GN=Imp4 PE=2 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 7.4e-89
Identity = 166/292 (56.85%), Postives = 214/292 (73.29%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE + IPTELR E  AL+  +E +
Sbjct: 1   MLRREARLRREYLYRKAREEAQRSVQEKKERVKRALEENQLIPTELRREALALQGSLEFD 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D       +H+DDEY      DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   
Sbjct: 61  DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           +  ++  C+A+  TD+++VHEHRG P GLIVSHLPFGPTAYF L NVV RH+I D   +G
Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TM EA PH+I + F+++LG+R ++IL++LFPVPK D+ RVITFANQ DYISFRHH+Y+K 
Sbjct: 181 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKKT 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL 292
              +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 241 DH-RNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of Moc04g29490 vs. ExPASy Swiss-Prot
Match: Q96G21 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Homo sapiens OX=9606 GN=IMP4 PE=1 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.3e-88
Identity = 166/292 (56.85%), Postives = 213/292 (72.95%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE + IPTELR E  AL+  +E +
Sbjct: 1   MLRREARLRREYLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFD 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D       +H+DDEY      DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   
Sbjct: 61  DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           +  ++  C+A+  TD+++VHEHRG P GLIVSHLPFGPTAYF L NVV RH+I D   +G
Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TM EA PH+I + F+++LG+R ++IL++LFPVPK D+ RVITFANQ DYISFRHH+Y+K 
Sbjct: 181 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKKT 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL 292
              +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 241 DH-RNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of Moc04g29490 vs. ExPASy Swiss-Prot
Match: Q5R947 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Pongo abelii OX=9601 GN=IMP4 PE=2 SV=2)

HSP 1 Score: 327.8 bits (839), Expect = 1.3e-88
Identity = 166/292 (56.85%), Postives = 213/292 (72.95%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE + IPTELR E  AL+  +E +
Sbjct: 1   MLRREARLRREYLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFD 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D       +H+DDEY      DPK++ITTSRDPS+ L  FAKELK+VFP AQRMNRG   
Sbjct: 61  DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           +  ++  C+A+  TD+++VHEHRG P GLIVSHLPFGPTAYF L NVV RH+I D   +G
Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TM EA PH+I + F+++LG+R ++IL++LFPVPK D+ RVITFANQ DYISFRHH+Y+K 
Sbjct: 181 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKKT 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRKFL 292
              +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Sbjct: 241 DH-RNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 288

[Close]

BLAST of Moc04g29490 vs. ExPASy TrEMBL
Match: A0A6J1DUL2 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Momordica charantia OX=3673 GN=LOC111024500 PE=4 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 7.3e-164
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 294
           GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD
Sbjct: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 293

[Close]

BLAST of Moc04g29490 vs. ExPASy TrEMBL
Match: A0A6J1K117 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita maxima OX=3661 GN=LOC111489687 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 282/293 (96.25%), Postives = 289/293 (98.63%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DD TAVPRTHIDDEYAN S++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           I+EIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMG
Sbjct: 121 IAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEKQ
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKQ 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 294
           GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD 293

[Close]

BLAST of Moc04g29490 vs. ExPASy TrEMBL
Match: A0A6J1FFE4 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita moschata OX=3662 GN=LOC111445227 PE=4 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 4.1e-159
Identity = 281/293 (95.90%), Postives = 288/293 (98.29%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           DD TAVPRTHIDDEYAN S++DPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           I+EIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMG
Sbjct: 121 IAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TMPEAYPHIILNNFTTKLGERTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK 
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 294
           GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD 293

[Close]

BLAST of Moc04g29490 vs. ExPASy TrEMBL
Match: A0A5D3BJ53 (U3 small nucleolar ribonucleoprotein IMP4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00630 PE=4 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 3.5e-158
Identity = 282/292 (96.58%), Postives = 286/292 (97.95%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D+ TAVPRTHIDDEYAN SEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           ISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEI+DKKAMG
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK 
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG 293
           GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292

[Close]

BLAST of Moc04g29490 vs. ExPASy TrEMBL
Match: A0A1S3CPI1 (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucumis melo OX=3656 GN=LOC103503328 PE=4 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 3.5e-158
Identity = 282/292 (96.58%), Postives = 286/292 (97.95%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELE
Sbjct: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELE 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D+ TAVPRTHIDDEYAN SEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV
Sbjct: 61  DELTAVPRTHIDDEYANASEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           ISEIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEI+DKKAMG
Sbjct: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIRDKKAMG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEKQ 240
           TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK 
Sbjct: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKH 240

Query: 241 GGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLG 293
           GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Sbjct: 241 GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRDFLG 292

[Close]

BLAST of Moc04g29490 vs. TAIR 10
Match: AT1G63780.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 473.4 bits (1217), Expect = 1.3e-133
Identity = 225/294 (76.53%), Postives = 265/294 (90.14%), Query Frame = 0


Query: 1   MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPIPTELRNEEAALRKEIELE 60
           M RR +RL++EY+YRKSLEG ER +YE+KR IREAL+EGKPIPTELRN EA LR+EI+LE
Sbjct: 1   MQRRLVRLKKEYIYRKSLEGDERKVYEQKRLIREALQEGKPIPTELRNVEAKLRQEIDLE 60

Query: 61  DDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQV 120
           D NTAVPR+HIDDEYAN +E DPKIL+TTSR+PSAPL +F KELK VFPN+QR+NRG QV
Sbjct: 61  DQNTAVPRSHIDDEYANATEADPKILLTTSRNPSAPLIRFTKELKFVFPNSQRINRGSQV 120

Query: 121 ISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDKKAMG 180
           ISEIIET R+H+FTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRH+I DKK++G
Sbjct: 121 ISEIIETARSHDFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHDISDKKSIG 180

Query: 181 TMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPDTKRVITFANQSDYISFRHHIYEK- 240
            MPE YPH+I NNFTT++G+R  NILKH+FP PK D KR++TF+NQSDYISFR+H+Y+K 
Sbjct: 181 KMPEQYPHLIFNNFTTQMGQRVGNILKHIFPAPKLDAKRIVTFSNQSDYISFRNHVYDKG 240

Query: 241 QGGVKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRKFLGD 294
           +GG KSIELKEIGPRFELRLYQ+KLGTV+Q EA+ EWVIRPYM T+KKRKF+G+
Sbjct: 241 EGGPKSIELKEIGPRFELRLYQVKLGTVEQNEAEIEWVIRPYMNTSKKRKFIGE 294

[Close]

BLAST of Moc04g29490 vs. TAIR 10
Match: AT4G01560.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-37
Identity = 108/307 (35.18%), Postives = 156/307 (50.81%), Query Frame = 0


Query: 9   RREYLYRKSLEGKERLLYEKKRKIR-------EALEEG-----KPIPTELRNEEAALRKE 68
           +R  +Y K    K+    EK++KIR        ALE G     K IP  + N   +    
Sbjct: 44  KRSKVYAKQKHEKK---LEKQKKIRARDAAEKRALELGEEPPQKMIPKTIENTRESDETV 103

Query: 69  IELEDDNTAVPRTHIDDEYANTSEVDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNR 128
              +D+         +       E+ PK+L+TT R  S        EL  V PN+    R
Sbjct: 104 CRPDDEELFADIDADEFNPVLRREIAPKVLLTTCRFNSTRGPALISELLSVIPNSHYQKR 163

Query: 129 GGQVISEIIETCRAHEFTDVILVHEHRGVPDGLIVSHLPFGPTAYFGLLNVVTRHEIKDK 188
           G   + +I+E     +FT +I+VH +R  PD L++  LP GPTA+F L N+V R +IK+ 
Sbjct: 164 GTYDLKKIVEYATKKDFTSLIVVHTNRREPDALLIIGLPNGPTAHFKLSNLVLRKDIKNH 223

Query: 189 KAMGTMPEAYPHIILNNFTTKLGERTANILKHLFPVPKPD--TKRVITFANQSDYISFRH 248
              G      P ++LNNFTT+LG R     + LFP P P+   +RV+TF NQ D+I FRH
Sbjct: 224 ---GNPTSHQPELVLNNFTTRLGNRVGRFFQSLFP-PDPNFRGRRVVTFHNQRDFIFFRH 283

Query: 249 HIY--------EKQGGVKSIE--LKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKT 292
           H Y          +G  ++I+  L+E GPRF L+L  ++ GT D    + EWV +P M T
Sbjct: 284 HRYIFETKESKSDKGKEETIKPRLQECGPRFTLKLVTLQHGTFDTKGGEFEWVHKPEMDT 343

The following BLAST results are available for this feature:

BLAST of Moc04g29490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157893.1	1.5e-163	100.00	U3 small nucleolar ribonucleoprotein protein IMP4 [Momordica charantia] >XP_0221...	[more]
XP_022993779.1	2.2e-159	96.25	U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima]	[more]
KAG6579112.1	8.5e-159	95.90	U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp...	[more]
KAG7016636.1	8.5e-159	95.90	U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp...	[more]
XP_022939256.1	8.5e-159	95.90	U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata] >XP_02293...	[more]

BLAST of Moc04g29490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0VD01	5.7e-89	57.19	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Bos taurus OX=9913 GN=IMP4 ...	[more]
Q8VHZ7	7.4e-89	56.85	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Mus musculus OX=10090 GN=Im...	[more]
Q5PQR5	7.4e-89	56.85	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Rattus norvegicus OX=10116 ...	[more]
Q96G21	1.3e-88	56.85	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Homo sapiens OX=9606 GN=IMP...	[more]
Q5R947	1.3e-88	56.85	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Pongo abelii OX=9601 GN=IMP...	[more]

BLAST of Moc04g29490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUL2	7.3e-164	100.00	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Momordica charantia OX=3673...	[more]
A0A6J1K117	1.1e-159	96.25	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1FFE4	4.1e-159	95.90	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucurbita moschata OX=3662 ...	[more]
A0A5D3BJ53	3.5e-158	96.58	U3 small nucleolar ribonucleoprotein IMP4 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CPI1	3.5e-158	96.58	U3 small nucleolar ribonucleoprotein protein IMP4 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Moc04g29490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63780.1	1.3e-133	76.53	Ribosomal RNA processing Brix domain protein	[more]
AT4G01560.1	2.3e-37	35.18	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 18..38
None	No IPR available	GENE3D	3.40.50.10480		coord: 82..258 e-value: 1.2E-47 score: 163.8
None	No IPR available	PANTHER	PTHR22734:SF2	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4	coord: 1..290
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 82..265
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 86..262 e-value: 4.2E-63 score: 225.6
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 90..260 e-value: 7.7E-34 score: 117.5
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 83..268 score: 45.191921
IPR044281	U3 snoRNP protein/Ribosome production factor 1	PANTHER	PTHR22734	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4	coord: 1..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g29490.1	Moc04g29490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0034457	Mpp10 complex
cellular_component	GO:0016363	nuclear matrix
cellular_component	GO:0032040	small-subunit processome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0042134	rRNA primary transcript binding
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0019843	rRNA binding