Moc04g28600 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g28600
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H-like superfamily protein
Location	chr4: 21222156 .. 21223388 (-)
RNA-Seq Expression	Moc04g28600
Synteny	Moc04g28600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCAAGGTTACTAAAGGATTGCTATTTCCCCGAGGATTCAATTCTCACCCCTACAACTAGTTCTTCAAATTCCTATCTTTGGAAAAGTATTGTTTGGGGTCGTGATTTGCTCGCCAAAGGCCTTTGGATAAGAATTGACAAGGGTCTTTCAACAAATTTCTTTAAGGATAGGTGGGTACCTCGTGAAAGCACTTTCAAACTGCCTTATTCGCACTTACCCGATGCAGATTTTATGGTTTCTGACTTCATTACCCTCATTTAAGTAGTGGGATGCTAGAAAACTGAGGAGTCTGGTTAATGAGGACGATTTACAGGCTATTCTTTATGTTCCTATTAGCTGCACTGAAGTGCTAGATTCTTGGATTTGGCATTATGACAGAAAATGAGCACTCACTAAGAGTGGTTATAAACTAGGTATGAACATTAGATTCTCCAACCCCTCAGTAATCTAAAATAGAACTGGGAGGTGGTGGAATTTTGTTTGGAAGCTTAAAGTGCCTCCAAAAGTTAAAAGATGTTTTTGTGGAGAGTGTTCAATGATTGTGTGCCTTCTATGGGAAACCTAATTAAGAAAGGGATTCCTGCAAACCCGAATTGTCTAGTCTGGAGGAAGCATATTGAAACAACTTACCGTACTTTATTCGAATGCAAAAGAGCAGATGATGTATGTAATAATCTGTTACCTCAAGATGTCTTGCAGTGTGATTTCAATAATTCCATCCAAGAGAGAATGTTGTATTTGGTGGAGACCTCTTTGATTCGGATTTCGATTTGGTTGAAATTAGTGTTTAGGCAATCTGGAACAACCAAAATGCAATTAGAATGCAAAGACAAATTCAAGACGTTAGGATTAAAAGCGATTGGATCCTTACCTATGTGAGGGATTTTCAGGCTCGTTATGTTTCAGGCGGGTATCAGTACTTTTGGTCGGATTATTGAGAGTCACTGGTCACCTCCCCCGATAGGTTGGATAAAATTTAACGTGGATGCAGCTTGTAAGAAGCCTCAATTTAGAACAGGAATAGGTATTGTCGGCAGAAATGACAAGGGACAAATTTTGGCATCGACTTACCATGATCCATTGAATGCAGAATCTCTTGCCCTCCTTGAAGACCTCTATTTGGCTGACCGTTTGAATATCCGAAAAGTACAGTTTGAATTTGATTCTTTGCAATTGATCAATCTACTCACCGAGGAACCCGATTCCTGTTGCGGTTCTGACGTTTAG

mRNA sequence

ATGGTTTCAAGGTTACTAAAGGATTGCTATTTCCCCGAGGATTCAATTCTCACCCCTACAACTAGTTCTTCAAATTCCTATCTTTGGAAAAGTATTGTTTGGGGTCGTGATTTGCTCGCCAAAGGCCTTTGGATAAGAATTGACAAGGGTCTTTCAACAAATTTCTTTAAGGATAGGTGGGTACCTCGTGAAAGCACTTTCAAACTGCCTTATTCGCACTTACCCGATGCAGATTTTATGGCGGGTATCAGTACTTTTGGTCGGATTATTGAGAGTCACTGGTCACCTCCCCCGATAGGTTGGATAAAATTTAACGTGGATGCAGCTTGTAAGAAGCCTCAATTTAGAACAGGAATAGGTATTGTCGGCAGAAATGACAAGGGACAAATTTTGGCATCGACTTACCATGATCCATTGAATGCAGAATCTCTTGCCCTCCTTGAAGACCTCTATTTGGCTGACCGTTTGAATATCCGAAAAGTACAGTTTGAATTTGATTCTTTGCAATTGATCAATCTACTCACCGAGGAACCCGATTCCTGTTGCGGTTCTGACGTTTAG

Coding sequence (CDS)

ATGGTTTCAAGGTTACTAAAGGATTGCTATTTCCCCGAGGATTCAATTCTCACCCCTACAACTAGTTCTTCAAATTCCTATCTTTGGAAAAGTATTGTTTGGGGTCGTGATTTGCTCGCCAAAGGCCTTTGGATAAGAATTGACAAGGGTCTTTCAACAAATTTCTTTAAGGATAGGTGGGTACCTCGTGAAAGCACTTTCAAACTGCCTTATTCGCACTTACCCGATGCAGATTTTATGGCGGGTATCAGTACTTTTGGTCGGATTATTGAGAGTCACTGGTCACCTCCCCCGATAGGTTGGATAAAATTTAACGTGGATGCAGCTTGTAAGAAGCCTCAATTTAGAACAGGAATAGGTATTGTCGGCAGAAATGACAAGGGACAAATTTTGGCATCGACTTACCATGATCCATTGAATGCAGAATCTCTTGCCCTCCTTGAAGACCTCTATTTGGCTGACCGTTTGAATATCCGAAAAGTACAGTTTGAATTTGATTCTTTGCAATTGATCAATCTACTCACCGAGGAACCCGATTCCTGTTGCGGTTCTGACGTTTAG

Protein sequence

MVSRLLKDCYFPEDSILTPTTSSSNSYLWKSIVWGRDLLAKGLWIRIDKGLSTNFFKDRWVPRESTFKLPYSHLPDADFMAGISTFGRIIESHWSPPPIGWIKFNVDAACKKPQFRTGIGIVGRNDKGQILASTYHDPLNAESLALLEDLYLADRLNIRKVQFEFDSLQLINLLTEEPDSCCGSDV

Homology

[Close]

BLAST of Moc04g28600 vs. NCBI nr
Match: XP_022142956.1 (uncharacterized protein LOC111012950 [Momordica charantia])

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-26
Identity = 68/93 (73.12%), Postives = 74/93 (79.57%), Query Frame = 0


Query: 100 GWIKFNVDAACKKPQFRTGIGIVGRNDKGQILAS------TYHDPLNAESLALLEDLYLA 159
           GWIK NVD ACKK QFRT IGIV RN+KGQILA+       YHDPL AESLALLE L LA
Sbjct: 31  GWIKINVDVACKKHQFRTAIGIVCRNEKGQILAAASRRMEAYHDPLMAESLALLEGLRLA 90

Query: 160 DRLNIRKVQFEFDSLQLINLLTEEPDSCCGSDV 187
           D LNI++VQFE DSLQLINLLTE+P S CGS+V
Sbjct: 91  DHLNIQQVQFESDSLQLINLLTEDPISWCGSNV 123

[Close]

BLAST of Moc04g28600 vs. NCBI nr
Match: XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia])

HSP 1 Score: 105.9 bits (263), Expect = 3.8e-19
Identity = 50/75 (66.67%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 74  LPDADFMAGISTFGRIIESHWSPPPIGWIKFNVDAACKKPQFRTGIGIVGRNDKGQILAS 133
           L D       S+  R IE++WSPPP GWIK NVDAACKK QFRTGIGIV RN+KGQILA+
Sbjct: 133 LGDFRIQEDASSNDRTIENYWSPPPAGWIKINVDAACKKHQFRTGIGIVCRNEKGQILAA 192

Query: 134 TYHDPLNAESLALLE 149
             HDPL AESLAL +
Sbjct: 193 ASHDPLMAESLALFD 207

[Close]

BLAST of Moc04g28600 vs. NCBI nr
Match: XP_037451095.1 (uncharacterized protein LOC119321571 [Triticum dicoccoides])

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13
Identity = 62/201 (30.85%), Postives = 91/201 (45.27%), Query Frame = 0


Query: 3   SRLLKDCYFPEDSILTPTTSSSNSYLWKSIVWGRDLLAKGLWIRIDKGLSTNFFKDRWVP 62
           +R+LK  YFP  SIL  T  S  S +W+SIV GRD++ +GL  RI  G +T  +   W+P
Sbjct: 37  ARILKAVYFPNCSILEATIGSHPSQIWRSIVEGRDIMKQGLIRRIGDGTTTEIWNTNWIP 96

Query: 63  RESTFKLPYSHLPDADFMAGISTFGRIIES-----------------HWSPPPIGWIKFN 122
           R    +   + +PD   +        + E                   W P      K N
Sbjct: 97  RPELMRPLVARVPDPPQLVAELIDSELEEEKKPINHCMNIPVTSAPRRWIPAIEDHAKIN 156

Query: 123 VDAACKKPQFRTGIG---IVGRNDKGQILAST------YHDPLNAESLALLEDLYLADRL 178
           VDAA     FR G+G    V RN+ GQ L S+        DP   E++A  E L LA+ L
Sbjct: 157 VDAAV----FR-GVGAAAAVCRNNAGQYLGSSVLVTRGLVDPATLEAMACREGLSLAEDL 216

[Close]

BLAST of Moc04g28600 vs. NCBI nr
Match: XP_022154440.1 (uncharacterized protein LOC111021711 [Momordica charantia])

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-13
Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 92  SHWSPPPIGWIKFNVDAACKKPQFRTGIGIVGRNDKGQILAS------TYHDPLNAESLA 151
           ++W+PP   W+K NVD ACK    RTGIG+V +NDKG+I+ +       +++PL  E+LA
Sbjct: 126 NYWAPPSPDWVKINVDTACKLSNSRTGIGVVCQNDKGEIIVAMIRKLDVFYEPLQVETLA 185

Query: 152 LLEDLYLADRLNIRKVQFEFDSLQLINLLTEEPD 180
           +LE L+L   L++  VQ + DS   INL+++E D
Sbjct: 186 ILEGLWLTQCLDLIFVQVDSDSQNSINLISQEYD 219

[Close]

BLAST of Moc04g28600 vs. NCBI nr
Match: BBH01244.1 (Ribonuclease H-like superfamily protein [Prunus dulcis])

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-13
Identity = 65/247 (26.32%), Postives = 94/247 (38.06%), Query Frame = 0


Query: 1    MVSRLLKDCYFPEDSILTPTTSSSNSYLWKSIVWGRDLLAKGLWIRIDKGLSTNFFKDRW 60
            M+ ++LK  YFP  + L      ++SY+W+S +WG +LL  GL  R   G  T  + D W
Sbjct: 824  MIHKVLKARYFPNCNFLAAGKGRASSYVWRSSIWGHELLLSGLRKRTGDGQDTLVYGDAW 883

Query: 61   VPRESTFKLPYSHLPDADFMAGISTFGR-------------------------------- 120
            +PR ++F+     + D +  AG     R                                
Sbjct: 884  IPRPNSFRPISPQVLDQESKAGDVKEKRNAVGLLDPLRNQEYKMLSGEKFDPKSLWQNRN 943

Query: 121  --IIESH-----------------------------------WSPPPIGWIKFNVDAACK 173
              ++E H                                   WSPPPI   K NVDAA  
Sbjct: 944  KVVVEGHSCAHEVIYERALYLADEYGDLVKGEPKIDFEKPTKWSPPPIDKYKLNVDAAYI 1003

[Close]

BLAST of Moc04g28600 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-08
Identity = 26/65 (40.00%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 1   MVSRLLKDCYFPEDSILTPTTSSSNSYLWKSIVWGRDLLAKGLWIRIDKGLSTNFFKDRW 60
           ++SRLL+  YFP  S++  +  +  SY W+SI+ GR+LL++GL   I  G+ T  + DRW
Sbjct: 84  LLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRW 143

Query: 61  VPRES 66
           +  E+
Sbjct: 144 IMDET 148

[Close]

BLAST of Moc04g28600 vs. ExPASy TrEMBL
Match: A0A6J1CNR4 (uncharacterized protein LOC111012950 OS=Momordica charantia OX=3673 GN=LOC111012950 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.9e-27
Identity = 68/93 (73.12%), Postives = 74/93 (79.57%), Query Frame = 0


Query: 100 GWIKFNVDAACKKPQFRTGIGIVGRNDKGQILAS------TYHDPLNAESLALLEDLYLA 159
           GWIK NVD ACKK QFRT IGIV RN+KGQILA+       YHDPL AESLALLE L LA
Sbjct: 31  GWIKINVDVACKKHQFRTAIGIVCRNEKGQILAAASRRMEAYHDPLMAESLALLEGLRLA 90

Query: 160 DRLNIRKVQFEFDSLQLINLLTEEPDSCCGSDV 187
           D LNI++VQFE DSLQLINLLTE+P S CGS+V
Sbjct: 91  DHLNIQQVQFESDSLQLINLLTEDPISWCGSNV 123

[Close]

BLAST of Moc04g28600 vs. ExPASy TrEMBL
Match: A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.8e-19
Identity = 50/75 (66.67%), Postives = 56/75 (74.67%), Query Frame = 0


Query: 74  LPDADFMAGISTFGRIIESHWSPPPIGWIKFNVDAACKKPQFRTGIGIVGRNDKGQILAS 133
           L D       S+  R IE++WSPPP GWIK NVDAACKK QFRTGIGIV RN+KGQILA+
Sbjct: 133 LGDFRIQEDASSNDRTIENYWSPPPAGWIKINVDAACKKHQFRTGIGIVCRNEKGQILAA 192

Query: 134 TYHDPLNAESLALLE 149
             HDPL AESLAL +
Sbjct: 193 ASHDPLMAESLALFD 207

[Close]

BLAST of Moc04g28600 vs. ExPASy TrEMBL
Match: A0A803QH29 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.0e-14
Identity = 50/138 (36.23%), Postives = 65/138 (47.10%), Query Frame = 0


Query: 4   RLLKDCYFPEDSILTPTTSSSNSYLWKSIVWGRDLLAKGLWIRIDKGLSTNFFKDRWVPR 63
           RLLK  Y+  +S L      S S  W+ I WGR+LL KGL  +ID G       D W+P 
Sbjct: 69  RLLKHRYYSRNSFLEAHLGHSPSLTWQEIHWGRELLIKGLRFKIDNGFQIQSGHDPWIPG 128

Query: 64  ESTFK---------LPYSHLPDADFMAGISTFGRIIESHWSPPPIGWIKFNVDAACKKPQ 123
              F+         LP +H     F    S +    E  W PP    +K NVDAA     
Sbjct: 129 NDEFRPISYSGPPSLPDAHQQHRPFSG--SNWKPTTEISWMPPAGNLLKMNVDAAANFND 188

Query: 124 FRTGIGIVGRNDKGQILA 133
            + GIG V RN+KG+++A
Sbjct: 189 KKFGIGAVVRNNKGEVIA 204

[Close]

BLAST of Moc04g28600 vs. ExPASy TrEMBL
Match: A0A6J1DJL6 (uncharacterized protein LOC111021711 OS=Momordica charantia OX=3673 GN=LOC111021711 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.2e-14
Identity = 41/94 (43.62%), Postives = 62/94 (65.96%), Query Frame = 0


Query: 92  SHWSPPPIGWIKFNVDAACKKPQFRTGIGIVGRNDKGQILAS------TYHDPLNAESLA 151
           ++W+PP   W+K NVD ACK    RTGIG+V +NDKG+I+ +       +++PL  E+LA
Sbjct: 126 NYWAPPSPDWVKINVDTACKLSNSRTGIGVVCQNDKGEIIVAMIRKLDVFYEPLQVETLA 185

Query: 152 LLEDLYLADRLNIRKVQFEFDSLQLINLLTEEPD 180
           +LE L+L   L++  VQ + DS   INL+++E D
Sbjct: 186 ILEGLWLTQCLDLIFVQVDSDSQNSINLISQEYD 219

[Close]

BLAST of Moc04g28600 vs. ExPASy TrEMBL
Match: A0A4Y1RAL7 (Ribonuclease H-like superfamily protein OS=Prunus dulcis OX=3755 GN=Prudu_011449 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 6.7e-14
Identity = 65/247 (26.32%), Postives = 94/247 (38.06%), Query Frame = 0


Query: 1    MVSRLLKDCYFPEDSILTPTTSSSNSYLWKSIVWGRDLLAKGLWIRIDKGLSTNFFKDRW 60
            M+ ++LK  YFP  + L      ++SY+W+S +WG +LL  GL  R   G  T  + D W
Sbjct: 824  MIHKVLKARYFPNCNFLAAGKGRASSYVWRSSIWGHELLLSGLRKRTGDGQDTLVYGDAW 883

Query: 61   VPRESTFKLPYSHLPDADFMAGISTFGR-------------------------------- 120
            +PR ++F+     + D +  AG     R                                
Sbjct: 884  IPRPNSFRPISPQVLDQESKAGDVKEKRNAVGLLDPLRNQEYKMLSGEKFDPKSLWQNRN 943

Query: 121  --IIESH-----------------------------------WSPPPIGWIKFNVDAACK 173
              ++E H                                   WSPPPI   K NVDAA  
Sbjct: 944  KVVVEGHSCAHEVIYERALYLADEYGDLVKGEPKIDFEKPTKWSPPPIDKYKLNVDAAYI 1003

[Close]

BLAST of Moc04g28600 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 61.2 bits (147), Expect = 9.9e-10
Identity = 26/65 (40.00%), Postives = 42/65 (64.62%), Query Frame = 0


Query: 1   MVSRLLKDCYFPEDSILTPTTSSSNSYLWKSIVWGRDLLAKGLWIRIDKGLSTNFFKDRW 60
           ++SRLL+  YFP  S++  +  +  SY W+SI+ GR+LL++GL   I  G+ T  + DRW
Sbjct: 84  LLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRW 143

Query: 61  VPRES 66
           +  E+
Sbjct: 144 IMDET 148

[Close]

BLAST of Moc04g28600 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 31/96 (32.29%), Postives = 45/96 (46.88%), Query Frame = 0


Query: 88  RIIESHWSPPPIGWIKFNVDAACKKPQFRTGIGIVGRNDKGQIL------ASTYHDPLNA 147
           R +   W  PP  W+K N DA  +    R GIG + RN+ G +L           + L A
Sbjct: 131 RNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEA 190

Query: 148 ESLALLEDLYLADRLNIRKVQFEFDSLQLINLLTEE 178
           E  AL   +    R N +++ FE D+  L+NLL  +
Sbjct: 191 ELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSD 226

[Close]

BLAST of Moc04g28600 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06
Identity = 31/90 (34.44%), Postives = 40/90 (44.44%), Query Frame = 0


Query: 94  WSPPPIGWIKFNVDAACKKPQFRTGIGIVGRNDKGQI------LASTYHDPLNAESLALL 153
           W PPP  W+K N DA   +   R GIG V RN+KG++              L AE  A+ 
Sbjct: 420 WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMR 479

Query: 154 EDLYLADRLNIRKVQFEFDSLQLINLLTEE 178
             +    R     V FE DS  LI +L  +
Sbjct: 480 WAVLSLSRFQYNYVIFESDSQVLIEILNND 509

[Close]

BLAST of Moc04g28600 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 48.1 bits (113), Expect = 8.7e-06
Identity = 31/90 (34.44%), Postives = 41/90 (45.56%), Query Frame = 0


Query: 94  WSPPPIGWIKFNVDAACKKPQFRTGIGIVGRND------KGQILASTYHDPLNAESLALL 153
           W  PP  WIK+N D A          G + R++       GQ + ST  D L +E  AL+
Sbjct: 186 WQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALI 245

Query: 154 EDLYLADRLNIRKVQFEFDSLQLINLLTEE 178
             +  A     RKV FE DS Q+  L+  E
Sbjct: 246 IAMQHAWSQGYRKVIFEGDSKQVEELMNNE 275

The following BLAST results are available for this feature:

BLAST of Moc04g28600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142956.1	1.4e-26	73.12	uncharacterized protein LOC111012950 [Momordica charantia]	[more]
XP_022145060.1	3.8e-19	66.67	uncharacterized protein LOC111014578 [Momordica charantia]	[more]
XP_037451095.1	1.1e-13	30.85	uncharacterized protein LOC119321571 [Triticum dicoccoides]	[more]
XP_022154440.1	1.1e-13	43.62	uncharacterized protein LOC111021711 [Momordica charantia]	[more]
BBH01244.1	1.4e-13	26.32	Ribonuclease H-like superfamily protein [Prunus dulcis]	[more]

BLAST of Moc04g28600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	1.4e-08	40.00	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Moc04g28600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNR4	6.9e-27	73.12	uncharacterized protein LOC111012950 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1CTE3	1.8e-19	66.67	uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A803QH29	3.0e-14	36.23	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A6J1DJL6	5.2e-14	43.62	uncharacterized protein LOC111021711 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A4Y1RAL7	6.7e-14	26.32	Ribonuclease H-like superfamily protein OS=Prunus dulcis OX=3755 GN=Prudu_011449...	[more]

BLAST of Moc04g28600 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00310.1	9.9e-10	40.00	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT2G34320.1	1.2e-07	32.29	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT4G29090.1	1.3e-06	34.44	Ribonuclease H-like superfamily protein	[more]
AT3G25270.1	8.7e-06	34.44	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 100..181 e-value: 6.9E-7 score: 31.4
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 105..177 e-value: 2.0E-9 score: 37.3
None	No IPR available	PANTHER	PTHR47074	BNAC02G40300D PROTEIN	coord: 89..176
None	No IPR available	PANTHER	PTHR47074:SF37	PROTEIN, PUTATIVE-RELATED	coord: 89..176
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 105..176 e-value: 6.08798E-10 score: 52.7016
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 100..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g28600.1	Moc04g28600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity