Moc04g27910 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g27910
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCCHC-type domain-containing protein
Locationchr4: 20615891 .. 20620999 (-)
RNA-Seq ExpressionMoc04g27910
SyntenyMoc04g27910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTTGCAGATGGTGTCCAAAGAAGTAGGACTAAACCAACAACAAAGACAACCAGAACAGATCAGGAGGATCTGCCATCAATTCAGGAACAACAATTGGGAAGTCAAAGAACGAGAACAAGTTCTTTAGGTTGTCAAGGATTATCCCCAGTTGTCAGACGGATGGGTGAATTGATGAAGTCGCGTCAGCGAACAGTTGCATCAGAGAAAATGAACCCAGTAGGTGCTGAGGTAAAAAACAGAGTTTCAATTCTGGCAGAAGGCTTGAATAGAGTTGTCAAGTCATCAGTGGGAAGTTCTTTCTTCAAGAATCAGTGTTTGAGAACAAAGAAAGAAGCTTCAGATATCGCCACTTGGTTTGAGTGGGAGCACGTGGCTGTATCTCTTGCGCTTGGGAGACAAGACCACGTAGATTGCCCGACCTCAGGGCAAAGACAGATGAGACCAATGATTTCTGATATTTTGTTTTACGAGTTTTTAAACTTACAGGAAAAGCCTTGAAGATTTTTTCAAGAAGATCAGAAGTTATTGCAGAAGAAGCCTTGGAGTTTCCAAGATTTTCAGAGACTGTTGTTGCAGTGGGAGGCAAGATCGATGTTTTGTCCCCAAATGAGAAATTGTTGGGATAATGCAGTCAAAACAGATGATCAGTGTCCTACGAGGAAAACGATTTTCAACACTACTACCAATTCCTACAAGGAGTAGGATATTGTTGTCTTATAACGATTACAATATTATTTTTCCTATAAGGATTGGGATATTTGAGCTCTTATAAATAGAACCCTTTTGTTAAGGTTTCATTTGTAGAGAATCCAAATAATAGAGACCTGAGTGGTTGTGGACAGTGTATGAAAAAAGGAGCTTGTATTTCATGAGTCTAATATGAAGGTATTTCTAATTGTGTAATCCTAGGTAGCCATTGTTAGGGTACATAGAAGCAAGATAGTAATATCTTGAGTGAGATCTCCATTATAATATTTTGAACTATAGTTGAACCTACTTTTTCGCAAAAGACTGGACATAGTCCCAAGATAGGGGCGAACCAATATAATCACTGTGGTGTTAAGCTTTTCTATCCCTATCTCTTATTCTTTTTATTGTTACTTACTTATATGCTTTTAGCCTGTGGAAGGGGAAAATCAAATAGTTCATATTTGAAGAACTTACAGGAGGATCGATTGATCTATATTTTTTTCCCAAGAGGAGGGGTAAGCAACATTGTTCTTAGACACTTGATCATCTTTTCTCCATTTACTAGCACTGACAAAATCTTCGGAGTGCTAACCCTTTTTTGCAGGACTTATCTTTGAGTGTTCTCGAAGATCTATTGAGATTATCGAAATTTTTCGATAAGAACACAATCGGAAAAAAATATTTATTTTTTCGTAATTAATAAATGGCTCGTGAAAACGAGCATAGCTCAACGATAATTGGCAAATCTCCAACCAAGAGGTTGTGAGTTTGATCACCACTCCACACATGTTGTACTGAAAAAATGAAAGAAAGAAATGAATCAAATAATAAAATTATTAATAATTATTAATAATGGAAATTAATGTATGCATAATAAAATGAGAGAGATCGAGAGAGTAAACTAAAAAGGCATGGGAATCAATGTATGCATAGGATCTTGGTTAGAACTTGGACTTTCTTTGGATCAAGGATCATCAAATGCTTTTGAATTTTCTTTGCATAGTCTTTATCTTTGTTGAATTGTAATAAAAGAATCTTAACATTAACATACATAAAGGAATCCCAAGTTTTAGACTTTTCCCTATCTCATGAAGTTTCTCCAAAAAAAAAAAAAAAAAAAAGGTTTTGTGAAAACCCATGTCAAAGAATTAAGTTCTTTGTTTACTTTTTACTTTTTAAAATTGAAGCATAGTTAAAAATAATAAAAATAAAAGATTGGCCTCAATGTAATTTGTGGTAAAAATCTAAATTATAGATGAAAAAAGAAAAAGAAAGAAAAAAGTAGAAGAGGAGAAGAAAAGATAATTATGAGCAACAACAATGTGTGATATCTTTACTTTGAAATTAAAAAAAGGATCAAAGGACAACATCGTATGGAGACACTTTCAATGTTTTATAATTGTTGAACTAGAAATATATATATATATATATATATATATATATATATATATATAATTAACTTATTCTAGGGAGAGTCATTTTCCCATGTGAAATAGGTAAAATTATATTTGAATAATAATTTTTTAAAATTTATTTTTTATGGACAAGTTTTTAGTAAATTATGATTCTCTTATAAAATAGTAATTTTAAAATATATAAAAATAAATTGACATTTACAGATAGTTTTGAAAATAAAAACACAAGTATCAAACGTTGAGAACAACTTCCAAACAAGTTTCTTAACCTTTGTCATTATATCAAATATCATTTTTCTCTTGGTTCATCCATTCCCATCAAACATAAGGTAGATTTTGAAACTGAAGTTCTGTCAAATTATAGTCTTATCAAAATTGAAAAAATGAGAGGTTAACAACTTGCTCCCAAATTAAGAGTAAAAATTACTAACTTCCAACAAAATTAGTTGAAATTTGTAGTTCAAAACTTTTCAATCTTTTAAAAATGAAGTCTACTTAATGAACATTTTTTGTTCCATAAAATTGATTAAGAAAAATTAAAAGATATTTTTTCATGGAAGTTTAATTTGTTTTTCTAAAAGAATAGAAAATAAAAAGAATAAGACCATTGTCAAACTTACTCTAAAGTATTATTATTTAATATTTAGAAGTGACGTCGTGATCCATGATCTCAACATATAACTTAAGGCTAAACAAAATATTCCAAACAAATTATAAATCATTTTTTAAAAATAAAGGTAAAGAAATACCTTAAAGAAGTTTTAGAGGAACATGAAAAATATGGTTAGCCGACCTGTAATGAAAATGAAACTTGAATAACAAATTAAAAGCATATTCTCCCACCTACCCATCAAATTATTATTAAAAATATTCAACAGTAAAATCCCATTATTTCCTTTCCTTCACAATTTAAAGATGGAATATTGCTATATATATAATAGAGTTCAAGTTTAATGTAAGAGAGAGAGAGAGTTTTACGCAAGAGGAAGATATGTTTTGGATCCATTTGGTAAATATCGTTTCAAGACAAAGCGTCCATATTCAGCGGTAATTAGCATATATTTCGACTTTCATATATTGTACTAAAAAAATTGTAATTTAAGGCATATTTGGTAACGTTCTTTCTTGTTTTTTTCTTTTGTTTTTTGTTTCTTGCTTTGTGTTTCTTCTTTTCTAATAAATATAGAAAAAGAGCTATATATTTGGTAATCGTTTCTTGTTTTTTATTCTCTAAAATTTTAGATAACAAAAAAGTAAACTTTTATATGAAAATTAATTTTTTAAATTAAATATTTTGTGTTTTGTGTAATTTTTATTTTTTTTAATATTTATTATTTATTTTATTAGACCTGAATGATAAAATAATATTTTTATTTTTATTTTGGAAAAAGCTAAAAACGAGAACTAAAAATAATTGATTTTATTGTTTCTAAAAGATTACGTTTCTTAAAAATGAGAAACGAGAAACAAAAATTATCAAACACTTATGTTTCTCAAACATCAAGAAACAAAAACATTACGTGATTAATTATGTTTTTTTATTTCTATTTTATATTTCTAATTTTTTTAAAATATAAATTTTGGTAAAGGATAATTATTCTTTTTTTTTTCATTATTTCTCGCTCTTATTTTTTTCCCTTGTACCCTCTCTTTTCAGACCACTAAAAGAATACAAATATGGTAACAATTTATATTTTTTTGGTCTCTCAAATTTTAAATTTAAGAAATAAAAGTTTTACTTTAAAATATATTCAAGTCTATTATGTTATACTAATTTTTTTCTATAATTTGTATACAAATTTTAGGAATGTTTCTTAAGAATAAAAAAGAGAGAGAAAAATATGAAATATTTATCAAATGCAATAGATGCGTATCAAAACTTGGTAATTAATAATAAGAAAACCAAAATAAACGGGTCTTCAAATCAAGGTTTTAAAAGTCAAATGGTAATGGAAATGGCAGTAAACTGTCGATGAATCTTTATAGAAAATATTATAAAATTATAAAATTGATAACAAATATTTAAATTCACAACTAAGCATCTCATCCTCTCTTTTTTATTAATATTAATATTTATGTTTATTTTAGTGATATTTTATTTATATTATTTATATTTTATCCTTTTTTTTACAATTTTATGGAAATATTGATTATCCTTTCATATCAATGTCAAACTTACGAATATGATAGAAAAAACTTATAAATATATAGAAACGTGGACATGTCATATAGAAATTTAATATCATACTTCCAAATGGAGGACTTTGCAGGTGGTGGCGGTGGTGGTTTTTAGGGAACTTATGGAGGAGCTTATTGACTTGTGGAAGGGGTTGGCTCTCACAGGGGAGGAAAATGAGGGTGTCCAAGCTGGGTCTGATAGCCGGTTGCTGTCTGCGGATAGGGTGAGAATTGTGTGCTGTGGCGAAATCAGTGTGGCGGGTTCATCATGGAACACAGATTGACCCGACAGGTGACAATATTTTCATCATCTGATTTCACTCTCGGGCTGATAAACTTCGAGTTCTTAATTCTGGTCTGTGGTCGTTTGATAAGGGCCTTGTTATTCTTGTTTCGCCGAAAGCTGCTGACCGGCCATCTGATTTACAGTTTACTACTCTCCTTTTGGATCCAAATCCACAATGTCCCTTTTCAGTGCATGACTCGGGAGATGGCAGTTCAATTAGGCAGTGTATTGGGGTTCGTTGAGAAAGTTGATTGTGATGGCAGCATGAACTGGGTTGGTGCTTTCTTATGCATTTGGGTACAACTGGATATTCGTCGGCCGCTCTGGCGAGGTGTAAAAATTAATATGGGATCGGGGAAGGAGGTGTGGTGTCTCATTCAGTATGAGCGGCTGCCTGATTTTTGTTATCGTTGTGGGCTTCTAGGCCACACTCTCCGTGAGTGCAGCGGTGCTCCTCCGCCCGATCAGCTGCTTCAGTATGGGGAGTGGTTGCGTGCCTCAGTGATGAAAAAAGGGTCCAGCGGTGCAAGCTGA

mRNA sequence

ATGCAAGTTGCAGATGGTGTCCAAAGAAGTAGGACTAAACCAACAACAAAGACAACCAGAACAGATCAGGAGGATCTGCCATCAATTCAGGAACAACAATTGGGAAGTCAAAGAACGAGAACAAGTTCTTTAGGTTGTCAAGGATTATCCCCAGTTGTCAGACGGATGGGTGAATTGATGAAGTCGCGTCAGCGAACAGTTGCATCAGAGAAAATGAACCCAGTAGGTGCTGAGGTAAAAAACAGAGTTTCAATTCTGGCAGAAGGCTTGAATAGAGTTGTCAAGTCATCAGTGGGAAGTTCTTTCTTCAAGAATCAGTGTTTGAGAACAAAGAAAGAAGCTTCAGATATCGCCACTTGGTTTGAGTGGGAGCACGTGGCTGTATCTCTTGCGCTTGGGAGACAAGACCACGTGGTGGCGGTGGTGGTTTTTAGGGAACTTATGGAGGAGCTTATTGACTTGTGGAAGGGGTTGGCTCTCACAGGGGAGGAAAATGAGGGTGTCCAAGCTGGGTCTGATAGCCGGTTGCTGTCTGCGGATAGGGTGACAATATTTTCATCATCTGATTTCACTCTCGGGCTGATAAACTTCGAGTTCTTAATTCTGGTCTGTGGTCGTTTGATAAGGGCCTTGTTATTCTTGTTTCGCCGAAAGCTGCTGACCGGCCATCTGATTTACAGTTTACTACTCTCCTTTTGGATCCAAATCCACAATGTCCCTTTTCAGTGCATGACTCGGGAGATGGCAGTTCAATTAGGCAGTGTATTGGGGTTCGTTGAGAAAGTTGATTGTGATGGCAGCATGAACTGGGTTGGTGCTTTCTTATGCATTTGGGTACAACTGGATATTCGTCGGCCGCTCTGGCGAGGTGTAAAAATTAATATGGGATCGGGGAAGGAGGTGTGGTGTCTCATTCAGTATGAGCGGCTGCCTGATTTTTGTTATCGTTGTGGGCTTCTAGGCCACACTCTCCGTGAGTGCAGCGGTGCTCCTCCGCCCGATCAGCTGCTTCAGTATGGGGAGTGGTTGCGTGCCTCAGTGATGAAAAAAGGGTCCAGCGGTGCAAGCTGA

Coding sequence (CDS)

ATGCAAGTTGCAGATGGTGTCCAAAGAAGTAGGACTAAACCAACAACAAAGACAACCAGAACAGATCAGGAGGATCTGCCATCAATTCAGGAACAACAATTGGGAAGTCAAAGAACGAGAACAAGTTCTTTAGGTTGTCAAGGATTATCCCCAGTTGTCAGACGGATGGGTGAATTGATGAAGTCGCGTCAGCGAACAGTTGCATCAGAGAAAATGAACCCAGTAGGTGCTGAGGTAAAAAACAGAGTTTCAATTCTGGCAGAAGGCTTGAATAGAGTTGTCAAGTCATCAGTGGGAAGTTCTTTCTTCAAGAATCAGTGTTTGAGAACAAAGAAAGAAGCTTCAGATATCGCCACTTGGTTTGAGTGGGAGCACGTGGCTGTATCTCTTGCGCTTGGGAGACAAGACCACGTGGTGGCGGTGGTGGTTTTTAGGGAACTTATGGAGGAGCTTATTGACTTGTGGAAGGGGTTGGCTCTCACAGGGGAGGAAAATGAGGGTGTCCAAGCTGGGTCTGATAGCCGGTTGCTGTCTGCGGATAGGGTGACAATATTTTCATCATCTGATTTCACTCTCGGGCTGATAAACTTCGAGTTCTTAATTCTGGTCTGTGGTCGTTTGATAAGGGCCTTGTTATTCTTGTTTCGCCGAAAGCTGCTGACCGGCCATCTGATTTACAGTTTACTACTCTCCTTTTGGATCCAAATCCACAATGTCCCTTTTCAGTGCATGACTCGGGAGATGGCAGTTCAATTAGGCAGTGTATTGGGGTTCGTTGAGAAAGTTGATTGTGATGGCAGCATGAACTGGGTTGGTGCTTTCTTATGCATTTGGGTACAACTGGATATTCGTCGGCCGCTCTGGCGAGGTGTAAAAATTAATATGGGATCGGGGAAGGAGGTGTGGTGTCTCATTCAGTATGAGCGGCTGCCTGATTTTTGTTATCGTTGTGGGCTTCTAGGCCACACTCTCCGTGAGTGCAGCGGTGCTCCTCCGCCCGATCAGCTGCTTCAGTATGGGGAGTGGTTGCGTGCCTCAGTGATGAAAAAAGGGTCCAGCGGTGCAAGCTGA

Protein sequence

MQVADGVQRSRTKPTTKTTRTDQEDLPSIQEQQLGSQRTRTSSLGCQGLSPVVRRMGELMKSRQRTVASEKMNPVGAEVKNRVSILAEGLNRVVKSSVGSSFFKNQCLRTKKEASDIATWFEWEHVAVSLALGRQDHVVAVVVFRELMEELIDLWKGLALTGEENEGVQAGSDSRLLSADRVTIFSSSDFTLGLINFEFLILVCGRLIRALLFLFRRKLLTGHLIYSLLLSFWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLWRGVKINMGSGKEVWCLIQYERLPDFCYRCGLLGHTLRECSGAPPPDQLLQYGEWLRASVMKKGSSGAS
Homology
[Close]
BLAST of Moc04g27910 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 148.7 bits (374), Expect = 9.7e-32
Identity = 61/126 (48.41%), Postives = 91/126 (72.22%), Query Frame = 0 

Query: 231 SFWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLWRG 290
           +FWIQIHN+PF+C++ EMA  LG+ LG VE+++ DG+  W G F+ + V++D+ +PL RG
Sbjct: 124 AFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRG 183

Query: 291 VKINMGSGKEVWCLIQYERLPDFCYRCGLLGHTLREC---SGAPPPDQLLQYGEWLRASV 350
           +K+    GK++WC ++YE+LPDFCY CG +GH+ REC   S     +   QYG+WLRA++
Sbjct: 184 IKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATL 243

Query: 351 MKKGSS 354
           +KK  S
Sbjct: 244 LKKSVS 249

[Close]
BLAST of Moc04g27910 vs. NCBI nr
Match: TXG50019.1 (hypothetical protein EZV62_025894 [Acer yangbiense])

HSP 1 Score: 124.8 bits (312), Expect = 1.5e-24
Identity = 57/121 (47.11%), Postives = 83/121 (68.60%), Query Frame = 0 

Query: 230 LSFWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLWR 289
           ++FWIQIH VP  CMT E+   LGS++G V+++D  GS + VG ++ + V +D+ +PL R
Sbjct: 125 VAFWIQIHKVPLLCMTSEIGRFLGSMIGEVKEIDDGGSGDCVGKYIRVRVVVDVTKPLRR 184

Query: 290 GVKIN-MGSGKEVWCLIQYERLPDFCYRCGLLGHTLRECSGAP----PPDQLLQYGEWLR 346
            ++++ +G GKE   L++YERLPD CYRCG +GH +R+CS  P    P D  L +G WLR
Sbjct: 185 MLRVDVLGDGKETNMLLRYERLPDHCYRCGRIGHVVRDCSIVPSSVEPEDYNLMFGSWLR 244

[Close]
BLAST of Moc04g27910 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])

HSP 1 Score: 124.4 bits (311), Expect = 2.0e-24
Identity = 50/98 (51.02%), Postives = 74/98 (75.51%), Query Frame = 0 

Query: 229 LLSFWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLW 288
           L +FW+QIH + F+CMT++MA  LG+ LG VE+VD   S +WV  FL + V++++ +PL 
Sbjct: 122 LCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPLR 181

Query: 289 RGVKINMGSGKEVWCLIQYERLPDFCYRCGLLGHTLRE 327
           RG+K+    GK++WC ++YERLPDFCY CG +GH++RE
Sbjct: 182 RGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIRE 219

[Close]
BLAST of Moc04g27910 vs. NCBI nr
Match: XP_030930480.1 (uncharacterized protein LOC115956164 [Quercus lobata])

HSP 1 Score: 119.8 bits (299), Expect = 4.8e-23
Identity = 56/120 (46.67%), Postives = 75/120 (62.50%), Query Frame = 0 

Query: 232 FWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLWRGV 291
           FWIQIH +P  C T+ + + +G+ LG VEKVD +GS   +G+FL I VQLDI +PL RG 
Sbjct: 120 FWIQIHRLPTMCQTKTVGMSIGATLGEVEKVDANGSGFCLGSFLRIRVQLDITKPLCRGR 179

Query: 292 KINMGSGKEVWCLIQYERLPDFCYRCGLLGHTLREC-----SGAPPPDQLLQYGEWLRAS 347
           K+ +G     W   +YERLP FCY CG++ H  R+C     S   P  +  Q+G WLRA+
Sbjct: 180 KVRLGEHGMKWVEFKYERLPIFCYLCGMIDHDERDCLQGFRSKETPRPEEKQFGPWLRAN 239

[Close]
BLAST of Moc04g27910 vs. NCBI nr
Match: XP_030941889.1 (uncharacterized protein LOC115966887 [Quercus lobata])

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-22
Identity = 56/121 (46.28%), Postives = 75/121 (61.98%), Query Frame = 0 

Query: 231 SFWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLWRG 290
           SFWIQIH +P  C T+ + + +G+ LG VEKVD +GS   +G+FL I VQLDI +PL  G
Sbjct: 119 SFWIQIHGLPTMCQTKTVGMSIGATLGEVEKVDANGSGFCLGSFLRIRVQLDITKPLCCG 178

Query: 291 VKINMGSGKEVWCLIQYERLPDFCYRCGLLGHTLREC-----SGAPPPDQLLQYGEWLRA 347
            K+ +G     W   +YERLP FCY CG++ H  R+C     S   P  +  Q+G WLRA
Sbjct: 179 RKVRLGEHGMKWVEFKYERLPIFCYLCGMIDHDERDCLQGFRSKEMPRPEEKQFGPWLRA 238

[Close]
BLAST of Moc04g27910 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.7e-32
Identity = 61/126 (48.41%), Postives = 91/126 (72.22%), Query Frame = 0 

Query: 231 SFWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLWRG 290
           +FWIQIHN+PF+C++ EMA  LG+ LG VE+++ DG+  W G F+ + V++D+ +PL RG
Sbjct: 124 AFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRG 183

Query: 291 VKINMGSGKEVWCLIQYERLPDFCYRCGLLGHTLREC---SGAPPPDQLLQYGEWLRASV 350
           +K+    GK++WC ++YE+LPDFCY CG +GH+ REC   S     +   QYG+WLRA++
Sbjct: 184 IKLKNSDGKDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATL 243

Query: 351 MKKGSS 354
           +KK  S
Sbjct: 244 LKKSVS 249

[Close]
BLAST of Moc04g27910 vs. ExPASy TrEMBL
Match: A0A5C7GZQ4 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025894 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.3e-25
Identity = 57/121 (47.11%), Postives = 83/121 (68.60%), Query Frame = 0 

Query: 230 LSFWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLWR 289
           ++FWIQIH VP  CMT E+   LGS++G V+++D  GS + VG ++ + V +D+ +PL R
Sbjct: 125 VAFWIQIHKVPLLCMTSEIGRFLGSMIGEVKEIDDGGSGDCVGKYIRVRVVVDVTKPLRR 184

Query: 290 GVKIN-MGSGKEVWCLIQYERLPDFCYRCGLLGHTLRECSGAP----PPDQLLQYGEWLR 346
            ++++ +G GKE   L++YERLPD CYRCG +GH +R+CS  P    P D  L +G WLR
Sbjct: 185 MLRVDVLGDGKETNMLLRYERLPDHCYRCGRIGHVVRDCSIVPSSVEPEDYNLMFGSWLR 244

[Close]
BLAST of Moc04g27910 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.5e-25
Identity = 50/98 (51.02%), Postives = 74/98 (75.51%), Query Frame = 0 

Query: 229 LLSFWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLW 288
           L +FW+QIH + F+CMT++MA  LG+ LG VE+VD   S +WV  FL + V++++ +PL 
Sbjct: 122 LCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPLR 181

Query: 289 RGVKINMGSGKEVWCLIQYERLPDFCYRCGLLGHTLRE 327
           RG+K+    GK++WC ++YERLPDFCY CG +GH++RE
Sbjct: 182 RGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVGHSIRE 219

[Close]
BLAST of Moc04g27910 vs. ExPASy TrEMBL
Match: A0A5C7IN84 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005503 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-22
Identity = 53/122 (43.44%), Postives = 84/122 (68.85%), Query Frame = 0 

Query: 230 LSFWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLWR 289
           ++FWIQIHNVP  CMT ++   LGS++G V+++D DG+ + VG ++ I V +++ +PL R
Sbjct: 87  VAFWIQIHNVPLLCMTTKIGRFLGSMIGVVKEIDDDGTGDCVGKYIRIMVVVNVDQPLRR 146

Query: 290 GVKIN-MGSGKEVWCLIQYERLPDFCYRCGLLGHTLRECSGAPPPDQL----LQYGEWLR 347
            ++++ +  GKE   L++YERLP+ C+RCGL+GH +R+C      D+L    L +G WL 
Sbjct: 147 ILRVDVLRDGKESTMLLRYERLPEHCFRCGLVGHVVRDCLSKSTSDELEDFNLLFGPWLN 206

[Close]
BLAST of Moc04g27910 vs. ExPASy TrEMBL
Match: A0A5C7H214 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023349 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-22
Identity = 55/133 (41.35%), Postives = 89/133 (66.92%), Query Frame = 0 

Query: 230 LSFWIQIHNVPFQCMTREMAVQLGSVLGFVEKVDCDGSMNWVGAFLCIWVQLDIRRPLWR 289
           ++FW+QIHNVP  CMT E+   LG ++G V+++D  G+ +  G ++ + V +++ +PL R
Sbjct: 199 VAFWVQIHNVPLLCMTIEIGRFLGGLIGEVKEIDDGGTGDCAGKYIRVRVVINVNQPLRR 258

Query: 290 GVKIN-MGSGKEVWCLIQYERLPDFCYRCGLLGHTLREC----SGAPPPDQLLQYGEWLR 349
            ++++ +G G E   L++YERLP+ C+RCGL+GH +R+C    S A P D  L +G WL 
Sbjct: 259 ILRVDVLGDGNESAMLLRYERLPEHCFRCGLIGHVVRDCLTKSSSAGPKDFNLLFGPWLN 318

Query: 350 A-SVMKKGSSGAS 357
           A S++K G S A+
Sbjct: 319 ASSLVKSGQSRAT 331

The following BLAST results are available for this feature:
BLAST of Moc04g27910 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022149484.19.7e-3248.41uncharacterized protein LOC111017902 [Momordica charantia][more]
TXG50019.11.5e-2447.11hypothetical protein EZV62_025894 [Acer yangbiense][more]
XP_022156711.12.0e-2451.02uncharacterized protein LOC111023555 [Momordica charantia][more]
XP_030930480.14.8e-2346.67uncharacterized protein LOC115956164 [Quercus lobata][more]
XP_030941889.11.4e-2246.28uncharacterized protein LOC115966887 [Quercus lobata][more]
BLAST of Moc04g27910 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc04g27910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D7654.7e-3248.41uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5C7GZQ47.3e-2547.11CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02589... [more]
A0A6J1DVS49.5e-2551.02uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5C7IN842.0e-2243.44CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00550... [more]
A0A5C7H2142.0e-2241.35CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02334... [more]
BLAST of Moc04g27910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 281..328
e-value: 2.6E-16
score: 59.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 230..328
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 230..328
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 314..327
score: 9.372511

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g27910.1Moc04g27910.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding