Moc04g27700 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc04g27700
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic
Location	chr4: 20444248 .. 20446885 (+)
RNA-Seq Expression	Moc04g27700
Synteny	Moc04g27700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACACGTGGAGGGGCTTCCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCATCTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCTGCTCCCCCTCGCAACCCCTTTGTTGGTTGCTGTGGGTGGGGGCACACGCTGGCCTTCCGTGCGCACCGTCGCGCGGATGGCTTAAATCCGAGTCCTCGGCGCCTGTCGTCGCGACTCTACGGTGGTTGATCAAACCTCGGTACCGCATCGCGGCCCCAGCCAACGTGCCTCCTCTCGCTCGCAAGGGAAGAGTCGACGAGGCCACTCAGACCGACCCTTCGAACGTCGTCCCGAAATGGAGGCGATGCTCTCGACGCGACCCCAGGTCAGGCGGGACTACCCGCTGAGTTTAAGCATATCAATAAGCAGAGGAAAAGAAACTTACAAGGATTTCCCTAGTAACGGCGAGAGAACCGGGAAGAGCCCAGCTTGAGAATCGGACGCCGAGCTTCAAAACACATTTTACATTAAGGGCATTCTCCGGATTGGGGAAGGCACCAGTTGCCTAGCTCTGTATTTTTCTGCACAAAATTGTAATTTCCGTTAGAAATCAACTCTAAATGACGTAAAAACGTCTTTTATGCATGTATAACCTAAGATAACTCCAAATGAAAGGTTTTAGACACTATAATAAGCTTAAAATACGGTTTCTGAATGTAAAACGTTAGAAAACAATACCAATTTAGCTTATTTTTACCCTTATAAATAAGGGAAATCAGAGCCACACCTCTATACGTTGTATTACCATGGAGATCATCGTCGAGGTTGCCATTGTCAGAGTGTCACGTGCCGCGTGCTGTAGGTCAAGCATGAGGCCATTGACTATCAAGTTCACGAGATTGCCGCACCATGGGTGTCGTCACCACTGTAGAACCAACGCAATGGAGGGACATCCATTTTGTTTGGGTTTGAATTTTTCATGGGCCGAGTTGAACCAAGCAAGAAAGATCCGGCCCACTAAGAACCAATCTCCATCATGTTAATGGGCTAGAGTATTAGAATGGGCCATCTCAATTCCAAAATTGAGAATTGTGTCGTGTGTGTGTTTTATTTCTCCTTTATCCATTCCCCACAAATTTGAGAACCACGTGATTTTTACACCACACAAAATAACAAAATAGTCTACAAAAGATAAAATCAAAACGTAAAAATTTGGTTTCAAAACATACAAAATAATTAAAAATTTAAGTTATGGGCTTAGATTCTAGTAACTGTAAATCGTATTCGAGGCGCATGTGATTTTGATATGGATCAAATTCAGGCCTTTACTTCTTTGACTCGGCTCGCGTGAGTTGTTTCTCTAGCATAAATGGCAAGTGGGAACTTTGAAGTATTTGCAGATATGACCTTGAAGTCTACTAATTTTCCCTTGTGTCCTCGTGGAGCCATAGAGAAAGATAAGACTTTGAAAAGATTGAGAAGAGGGTGTGATTTCAGAGTTATGAATATGAGGTGCTGCCTTGGCCTTGGCCTCCACATCCCCAGGGCCTTGCCTTCTCTCTCCTCTTCTCAATCCCTCTTTCCTTCTCTCTCTTCCATTTCCAAACTGCAGAAATTGCCGTCTAATTCTACCCCCAACAATAAAAATGTCCTCTCTCTCTCTCCTCTCCCTTCTTTCTCTCTCTTCTTCCTTTTTTTTCCTCTCTCTGAACTTAATTTTTGGGTGTAGTTTCAGGCAGTGGCAAGCATCAGTGAAGATCCCATTGCCAATGTTCACCAGAAGAAACCCAGTTTGGCTTTTCAAGTTGCAGCCCTTTTAGCCACTGTGAGCAAATCAAGTTTGGATTTTGGAGTCTTTTTTAATTCAAATTTGAAATTTAACGTGATGAAAAGATTAAAAAAAAAAGATTTTATTTTATTAATTTCTTTTTTGAAACAGATTGGGGAGCCAGCAAATGCTGTAACAGGAGACAACAACCATGAGGTTCCACTGTCATGGATTTTGACACAATTGGGCATTGTTGGATTCTTTTACTTCCTTGTCTTTCCGGTAAGAATTCCTAATTTTGGGATTTTTTTTGGTTTTTTTGAAATTTTGTTTTTGATAAATTGAATTTCCAAAATTGGTGAGTTTTTGGCAGCCAATCATCATGAACTGGCTGAGGATAAGATGGTATAGAAGGAACTTGTTGGAGATGTATCTGCAATTCATGTGTGTCTTCCTTTTCTTCCCTGGGTAAGTTCTATTTTATTTTGATGGTAGAAAGGCAATTAAAGGTATTTTTATGAGTATTTCCAACAGCACTGTAATAAAAACAGCTTAATTACAACAAATAACTTTCATCTATATTTGGTTTATCTCTTAATAGTGTTTCTTGATTAAGTAGTTTGAGCTAAAAGTTCTCTACAAATGCTTTCTGACAAAGCACTCTAGATTCTTTTATGCTGTCCTCAAACATTATGGTTTTGATGGAGAAGTATGGTAAAAGTGATTCGCTTCTTGGTTGCAGAATTCTAGTGTGGGCGCCATTTCTGAACTTCAGAAAGCTTCCACGAGATCCATCGCTGAAGTATCCATGGGCGACGCCGGAAGACCCATCTCAGGTCAAAAATGCATACTTGAAGTACCCATTTGCGAAGCCTGAAGATTACGACTGGTAA

mRNA sequence

ATGGAAGACACGTGGAGGGGCTTCCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCATCTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCTGCTCCCCCTCGCAACCCCTTTGTTGGTTGCTGTGGGTGGGGGCACACGCTGGCCTTCCGTGCGCACCGTCGCGCGGATGGCTTAAATCCGAGTCCTCGGCGCCTGTCGTCGCGACTCTACGGTGGTTGATCAAACCTCGGTACCGCATCGCGGCCCCAGCCAACGTGCCTCCTCTCGCTCGCAAGGGAAGAGTCGACGAGGCCACTCAGACCGACCCTTCGAACGTCTTTCAGGCAGTGGCAAGCATCAGTGAAGATCCCATTGCCAATGTTCACCAGAAGAAACCCAGTTTGGCTTTTCAAGTTGCAGCCCTTTTAGCCACTATTGGGGAGCCAGCAAATGCTGTAACAGGAGACAACAACCATGAGGTTCCACTGTCATGGATTTTGACACAATTGGGCATTGTTGGATTCTTTTACTTCCTTGTCTTTCCGCCAATCATCATGAACTGGCTGAGGATAAGATGGTATAGAAGGAACTTGTTGGAGATGTATCTGCAATTCATGTGTGTCTTCCTTTTCTTCCCTGGAATTCTAGTGTGGGCGCCATTTCTGAACTTCAGAAAGCTTCCACGAGATCCATCGCTGAAGTATCCATGGGCGACGCCGGAAGACCCATCTCAGGTCAAAAATGCATACTTGAAGTACCCATTTGCGAAGCCTGAAGATTACGACTGGTAA

Coding sequence (CDS)

ATGGAAGACACGTGGAGGGGCTTCCGAGTCTTTGAACGCAAGTTGCGCCCGGAGCCATCTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCTGCTCCCCCTCGCAACCCCTTTGTTGGTTGCTGTGGGTGGGGGCACACGCTGGCCTTCCGTGCGCACCGTCGCGCGGATGGCTTAAATCCGAGTCCTCGGCGCCTGTCGTCGCGACTCTACGGTGGTTGATCAAACCTCGGTACCGCATCGCGGCCCCAGCCAACGTGCCTCCTCTCGCTCGCAAGGGAAGAGTCGACGAGGCCACTCAGACCGACCCTTCGAACGTCTTTCAGGCAGTGGCAAGCATCAGTGAAGATCCCATTGCCAATGTTCACCAGAAGAAACCCAGTTTGGCTTTTCAAGTTGCAGCCCTTTTAGCCACTATTGGGGAGCCAGCAAATGCTGTAACAGGAGACAACAACCATGAGGTTCCACTGTCATGGATTTTGACACAATTGGGCATTGTTGGATTCTTTTACTTCCTTGTCTTTCCGCCAATCATCATGAACTGGCTGAGGATAAGATGGTATAGAAGGAACTTGTTGGAGATGTATCTGCAATTCATGTGTGTCTTCCTTTTCTTCCCTGGAATTCTAGTGTGGGCGCCATTTCTGAACTTCAGAAAGCTTCCACGAGATCCATCGCTGAAGTATCCATGGGCGACGCCGGAAGACCCATCTCAGGTCAAAAATGCATACTTGAAGTACCCATTTGCGAAGCCTGAAGATTACGACTGGTAA

Protein sequence

MEDTWRGFRVFERKLRPEPSGRGHVCLGVTHRCSPSQPLCWLLWVGAHAGLPCAPSRGWLKSESSAPVVATLRWLIKPRYRIAAPANVPPLARKGRVDEATQTDPSNVFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW

Homology

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BLAST of Moc04g27700 vs. NCBI nr
Match: XP_022159257.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 314.3 bits (804), Expect = 9.7e-82
Identity = 151/159 (94.97%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 100 ATQTDPSNVFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLS 159
           +  T  +  FQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLS
Sbjct: 41  SNSTPNNKNFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLS 100

Query: 160 WILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNF 219
           WILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNF
Sbjct: 101 WILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNF 160

Query: 220 RKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 259
           RKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
Sbjct: 161 RKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 199

[Close]

BLAST of Moc04g27700 vs. NCBI nr
Match: XP_022159258.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 312.0 bits (798), Expect = 4.8e-81
Identity = 151/170 (88.82%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 89  PPLARKGRVDEATQTDPSNVFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAV 148
           P L+   ++ +       N   AVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAV
Sbjct: 28  PSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAV 87

Query: 149 TGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFP 208
           TGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFP
Sbjct: 88  TGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFP 147

Query: 209 GILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 259
           GILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
Sbjct: 148 GILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 197

[Close]

BLAST of Moc04g27700 vs. NCBI nr
Match: XP_038875378.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Benincasa hispida])

HSP 1 Score: 279.3 bits (713), Expect = 3.5e-71
Identity = 126/150 (84.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 109 FQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQLGIV 168
           F+ V SI EDP+  +HQKK SLA Q+AA+LAT+GE ANAVTG+NNHEVPL+WIL QLGIV
Sbjct: 46  FEVVGSIKEDPVGYLHQKKTSLALQLAAILATVGEAANAVTGENNHEVPLTWILAQLGIV 105

Query: 169 GFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSL 228
           GFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGIL+WAPFLNFRK PRDPS+
Sbjct: 106 GFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSM 165

Query: 229 KYPWATPEDPSQVKNAYLKYPFAKPEDYDW 259
           KYPW+TP++PSQ+KNAYLKYPFAKPEDYDW
Sbjct: 166 KYPWSTPQEPSQIKNAYLKYPFAKPEDYDW 195

[Close]

BLAST of Moc04g27700 vs. NCBI nr
Match: XP_022991037.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 278.5 bits (711), Expect = 5.9e-71
Identity = 132/174 (75.86%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 85  PANVPPLARKGRVDEATQTDPSNVFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEP 144
           P  +P L+   ++ +      S  FQ VASI EDPIA + QKK SL+ Q AALLAT+ EP
Sbjct: 10  PKALPSLSSPFKLLKLPSNSTSINFQVVASIREDPIAFLRQKKTSLSLQFAALLATVAEP 69

Query: 145 ANAVTGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVF 204
           ANAVTGDNNHEVPL+WILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMY+QFMCVF
Sbjct: 70  ANAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVF 129

Query: 205 LFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 259
           L FPGIL+WAPFLNFRK PRDPS+KYPW+TP++PSQ+KN YLKYPFAKPEDYDW
Sbjct: 130 LCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW 183

[Close]

BLAST of Moc04g27700 vs. NCBI nr
Match: XP_023527074.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.0 bits (702), Expect = 6.5e-70
Identity = 127/150 (84.67%), Postives = 138/150 (92.00%), Query Frame = 0


Query: 109 FQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQLGIV 168
           FQ VASI EDPIA + QKK SL+ Q AALLAT+ EPA AVTGDNNHEVPL+WILTQLGIV
Sbjct: 44  FQVVASIREDPIAFLRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILTQLGIV 103

Query: 169 GFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSL 228
           GFFYFLVFPPIIMNWLRIRWYRRNLLEMY+QFMCVFL FPGIL+WAPFLNFRK PRDPS+
Sbjct: 104 GFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSM 163

Query: 229 KYPWATPEDPSQVKNAYLKYPFAKPEDYDW 259
           KYPW+TP++PSQ+KN YLKYPFAKPEDYDW
Sbjct: 164 KYPWSTPQEPSQIKNGYLKYPFAKPEDYDW 193

[Close]

BLAST of Moc04g27700 vs. ExPASy Swiss-Prot
Match: Q9CAC5 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhL PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.4e-45
Identity = 85/132 (64.39%), Postives = 102/132 (77.27%), Query Frame = 0


Query: 126 KKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLR 185
           KK  LA Q+ A+LATI  PA A+TG NN +  LS ++  +GI+  +YFLV PPIIMNWLR
Sbjct: 59  KKTILAAQLGAVLATIDHPALAITGVNNQQ-ELSSVVLDIGIISVWYFLVMPPIIMNWLR 118

Query: 186 IRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAY 245
           +RWYRR   EMYLQFM VF+FFPG+L+WAPFLNFRK PRDP++K PW  P DP  +KN Y
Sbjct: 119 VRWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNMKNPWDKPTDPDSIKNVY 178

Query: 246 LKYPFAKPEDYD 258
           LKYP+A PEDYD
Sbjct: 179 LKYPYATPEDYD 189

[Close]

BLAST of Moc04g27700 vs. ExPASy Swiss-Prot
Match: Q7U620 (NAD(P)H-quinone oxidoreductase subunit L OS=Synechococcus sp. (strain WH8102) OX=84588 GN=ndhL PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.1e-06
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 161 ILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFR 220
           ++    ++G  Y LV P  +  W+  RW R   +E  L +  VFLFFPG++V+APFLNFR
Sbjct: 17  VILAYALLGGLYLLVVPLALFFWMNSRWTRMGKIERLLVYGLVFLFFPGMVVFAPFLNFR 76

[Close]

BLAST of Moc04g27700 vs. ExPASy Swiss-Prot
Match: Q10W93 (NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ndhL PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.0e-06
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 172 YFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFR 221
           YFLV P I+  +L+ RWY  + +E    +  +FLFFPG+LV +PFLNFR
Sbjct: 22  YFLVMPAIVYAYLKTRWYVVSSIERVFMYFLMFLFFPGMLVLSPFLNFR 70

[Close]

BLAST of Moc04g27700 vs. ExPASy Swiss-Prot
Match: Q8YMW5 (NAD(P)H-quinone oxidoreductase subunit L OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=ndhL PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05
Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 172 YFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPR 225
           Y LV P  ++ +L++RWY  + +E    +  VFLFFPG+LV +PF+N R  PR
Sbjct: 14  YLLVVPVALLFYLKLRWYVVSSIERTFMYFLVFLFFPGLLVLSPFVNLRPRPR 66

[Close]

BLAST of Moc04g27700 vs. ExPASy Swiss-Prot
Match: B0C6G0 (NAD(P)H-quinone oxidoreductase subunit L OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=ndhL PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.6e-05
Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 161 ILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFR 220
           ++  LG++G  Y LV P I   +L+ RWY  + LE    +  VF FFP +L+ +PFLNFR
Sbjct: 5   LILLLGLLG-GYLLVMPAITYFYLQKRWYVASSLERGFMYFLVFFFFPSLLLLSPFLNFR 64

Query: 221 KLPR 225
             PR
Sbjct: 65  PQPR 67

[Close]

BLAST of Moc04g27700 vs. ExPASy TrEMBL
Match: A0A6J1DZB7 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025670 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 4.7e-82
Identity = 151/159 (94.97%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 100 ATQTDPSNVFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLS 159
           +  T  +  FQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLS
Sbjct: 41  SNSTPNNKNFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLS 100

Query: 160 WILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNF 219
           WILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNF
Sbjct: 101 WILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNF 160

Query: 220 RKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 259
           RKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
Sbjct: 161 RKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 199

[Close]

BLAST of Moc04g27700 vs. ExPASy TrEMBL
Match: A0A6J1DYB3 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025670 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 2.3e-81
Identity = 151/170 (88.82%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 89  PPLARKGRVDEATQTDPSNVFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAV 148
           P L+   ++ +       N   AVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAV
Sbjct: 28  PSLSSISKLQKLPSNSTPNNKNAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAV 87

Query: 149 TGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFP 208
           TGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFP
Sbjct: 88  TGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFP 147

Query: 209 GILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 259
           GILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW
Sbjct: 148 GILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 197

[Close]

BLAST of Moc04g27700 vs. ExPASy TrEMBL
Match: A0A6J1JKK4 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487750 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.9e-71
Identity = 132/174 (75.86%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 85  PANVPPLARKGRVDEATQTDPSNVFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEP 144
           P  +P L+   ++ +      S  FQ VASI EDPIA + QKK SL+ Q AALLAT+ EP
Sbjct: 10  PKALPSLSSPFKLLKLPSNSTSINFQVVASIREDPIAFLRQKKTSLSLQFAALLATVAEP 69

Query: 145 ANAVTGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVF 204
           ANAVTGDNNHEVPL+WILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMY+QFMCVF
Sbjct: 70  ANAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVF 129

Query: 205 LFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 259
           L FPGIL+WAPFLNFRK PRDPS+KYPW+TP++PSQ+KN YLKYPFAKPEDYDW
Sbjct: 130 LCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW 183

[Close]

BLAST of Moc04g27700 vs. ExPASy TrEMBL
Match: A0A6J1JV10 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487750 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 7.0e-70
Identity = 127/153 (83.01%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 106 SNVFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQL 165
           S     VASI EDPIA + QKK SL+ Q AALLAT+ EPANAVTGDNNHEVPL+WILTQL
Sbjct: 29  STSINVVASIREDPIAFLRQKKTSLSLQFAALLATVAEPANAVTGDNNHEVPLTWILTQL 88

Query: 166 GIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRD 225
           GIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMY+QFMCVFL FPGIL+WAPFLNFRK PRD
Sbjct: 89  GIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRD 148

Query: 226 PSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 259
           PS+KYPW+TP++PSQ+KN YLKYPFAKPEDYDW
Sbjct: 149 PSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW 181

[Close]

BLAST of Moc04g27700 vs. ExPASy TrEMBL
Match: A0A6J1GQ88 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456098 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.6e-69
Identity = 129/174 (74.14%), Postives = 145/174 (83.33%), Query Frame = 0


Query: 85  PANVPPLARKGRVDEATQTDPSNVFQAVASISEDPIANVHQKKPSLAFQVAALLATIGEP 144
           P  +P L+   ++ +      S  FQ VA I EDPI  + QKK SL+ Q AALLAT+ EP
Sbjct: 10  PKALPSLSSPFKLLKLPSNPTSISFQVVACIREDPIGFLRQKKTSLSLQFAALLATVAEP 69

Query: 145 ANAVTGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVF 204
           A AVTGDNNHEVPL+WILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMY+QFMCVF
Sbjct: 70  ATAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYVQFMCVF 129

Query: 205 LFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAYLKYPFAKPEDYDW 259
           L FPGIL+WAPFLNFRK PRDPS+KYPW+TP++PSQ+KN YLKYPFAKPEDYDW
Sbjct: 130 LCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNGYLKYPFAKPEDYDW 183

[Close]

BLAST of Moc04g27700 vs. TAIR 10
Match: AT1G70760.1 (inorganic carbon transport protein-related )

HSP 1 Score: 183.3 bits (464), Expect = 2.4e-46
Identity = 85/132 (64.39%), Postives = 102/132 (77.27%), Query Frame = 0


Query: 126 KKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQLGIVGFFYFLVFPPIIMNWLR 185
           KK  LA Q+ A+LATI  PA A+TG NN +  LS ++  +GI+  +YFLV PPIIMNWLR
Sbjct: 59  KKTILAAQLGAVLATIDHPALAITGVNNQQ-ELSSVVLDIGIISVWYFLVMPPIIMNWLR 118

Query: 186 IRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWATPEDPSQVKNAY 245
           +RWYRR   EMYLQFM VF+FFPG+L+WAPFLNFRK PRDP++K PW  P DP  +KN Y
Sbjct: 119 VRWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNMKNPWDKPTDPDSIKNVY 178

Query: 246 LKYPFAKPEDYD 258
           LKYP+A PEDYD
Sbjct: 179 LKYPYATPEDYD 189

The following BLAST results are available for this feature:

BLAST of Moc04g27700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159257.1	9.7e-82	94.97	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Momordica ch...	[more]
XP_022159258.1	4.8e-81	88.82	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 [Momordica ch...	[more]
XP_038875378.1	3.5e-71	84.00	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Benincasa hispida]	[more]
XP_022991037.1	5.9e-71	75.86	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita ma...	[more]
XP_023527074.1	6.5e-70	84.67	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita pe...	[more]

BLAST of Moc04g27700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAC5	3.4e-45	64.39	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q7U620	3.1e-06	43.33	NAD(P)H-quinone oxidoreductase subunit L OS=Synechococcus sp. (strain WH8102) OX...	[more]
Q10W93	4.0e-06	51.02	NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS...	[more]
Q8YMW5	1.5e-05	45.28	NAD(P)H-quinone oxidoreductase subunit L OS=Nostoc sp. (strain PCC 7120 / SAG 25...	[more]
B0C6G0	2.6e-05	43.75	NAD(P)H-quinone oxidoreductase subunit L OS=Acaryochloris marina (strain MBIC 11...	[more]

BLAST of Moc04g27700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZB7	4.7e-82	94.97	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Momordica ...	[more]
A0A6J1DYB3	2.3e-81	88.82	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Momordica ...	[more]
A0A6J1JKK4	2.9e-71	75.86	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Cucurbita ...	[more]
A0A6J1JV10	7.0e-70	83.01	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Cucurbita ...	[more]
A0A6J1GQ88	1.6e-69	74.14	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X3 OS=Cucurbita ...	[more]

BLAST of Moc04g27700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70760.1	2.4e-46	64.39	inorganic carbon transport protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019654	NAD(P)H-quinone oxidoreductase subunit L	PFAM	PF10716	NdhL	coord: 154..225 e-value: 2.5E-28 score: 97.8
None	No IPR available	PANTHER	PTHR36727	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT L, CHLOROPLASTIC	coord: 101..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc04g27700.1	Moc04g27700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding